Modeling the impact of sea level rise on endangered deer habitat.

Numerous unique flora and fauna inhabit the Lower Florida Keys, including the endangered Florida Key deer, found nowhere else. In this vulnerable habitat of flat islands with low elevation, accelerated sea level rise poses a threat. Predicting the impact of sea level rise on vegetation and wildlife is crucial. This study used 5 Intergovernmental Panel on Climate Change (IPCC) sea level rise scenarios to assess their effects on No Name Key, Florida. The goal was to estimate changes in the Florida Key deer population relative to sea level rise using a lidar-derived elevation data and a vegetation map. The method used 2 cases to model the sea level rise impact. In Case 1, total non-submerged area at current sea level was determined. Using 5 IPCC scenarios, a new total non-submerged land area was estimated, and deer numbers were predicted for each scenario. In Case 2, upward migration of coastal vegetation combined with the coastal squeeze process was modeled. A distinct elevation range for each vegetation type at the current sea level was determined. Vegetation ranges were redistributed based on respective elevation ranges in the sea level rise scenarios. Areas for each vegetation type were recalculated, and Key deer numbers were estimated for each sea level rise scenario. Results under the worst emission scenario showed the following: (1) for case 1, the land area was reduced to 30 % of the current land area, corresponding to having about 27 deer, and (2) for case 2, the land area was reduced to 70 % of the current land area, having about 54 deer on No Name Key. The results indicated reduced non-submerged land area and less upland vegetation, particularly hardwoods/hammocks, by the year 2100. As less land area is available, a decline in Key deer population is expected as sea levels rise. Since Key deer favor upland vegetation, habitat affected by sea level rise will likely support a smaller deer population. The findings emphasize the need for precise, timely predictions of sea level rise impacts and long-term conservation strategies. Specifically designed measures are required to protect and maintain endangered wildlife, such as the Florida Key deer, residing on these vulnerable islands.

ICESat-2 for Canopy Cover Estimation at Large-Scale on a Cloud-Based Platform.

Forest canopy cover is an essential biophysical parameter of ecological significance, especially for characterizing woodlands and forests. This research focused on using data from the ICESat-2/ATLAS spaceborne lidar sensor, a photon-counting altimetry system, to map the forest canopy cover over a large country extent. The study proposed a novel approach to compute categorized canopy cover using photon-counting data and available ancillary Landsat images to build the canopy cover model. In addition, this research tested a cloud-mapping platform, the Google Earth Engine (GEE), as an example of a large-scale study. The canopy cover map of the Republic of Türkiye produced from this study has an average accuracy of over 70%. Even though the results were promising, it has been determined that the issues caused by the auxiliary data negatively affect the overall success. Moreover, while GEE offered many benefits, such as user-friendliness and convenience, it had processing limits that posed challenges for large-scale studies. Using weak or strong beams' segments separately did not show a significant difference in estimating canopy cover. Briefly, this study demonstrates the potential of using photon-counting data and GEE for mapping forest canopy cover at a large scale.

Unoccupied aerial systems discovered overlooked loci capturing the variation of entire growing period in maize.

Traditional phenotyping methods, coupled with genetic mapping in segregating populations, have identified loci governing complex traits in many crops. Unoccupied aerial systems (UAS)-based phenotyping has helped to reveal a more novel and dynamic relationship between time-specific associated loci with complex traits previously unable to be evaluated. Over 1,500 maize (Zea mays L.) hybrid row plots containing 280 different replicated maize hybrids from the Genomes to Fields (G2F) project were evaluated agronomically and using UAS in 2017. Weekly UAS flights captured variation in plant heights during the growing season under three different management conditions each year: optimal planting with irrigation (G2FI), optimal dryland planting without irrigation (G2FD), and a stressed late planting (G2LA). Plant height of different flights were ranked based on importance for yield using a random forest (RF) algorithm. Plant heights captured by early flights in G2FI trials had higher importance (based on Gini scores) for predicting maize grain yield (GY) but also higher accuracies in genomic predictions which fluctuated for G2FD (-0.06∼0.73), G2FI (0.33∼0.76), and G2LA (0.26∼0.78) trials. A genome-wide association analysis discovered 52 significant single nucleotide polymorphisms (SNPs), seven were found consistently in more than one flights or trial; 45 were flight or trial specific. Total cumulative marker effects for each chromosome's contributions to plant height also changed depending on flight. Using UAS phenotyping, this study showed that many candidate genes putatively play a role in the regulation of plant architecture even in relatively early stages of maize growth and development.

Measurement and Calibration of Plant-Height from Fixed-Wing UAV Images.

Continuing population growth will result in increasing global demand for food and fiber for the foreseeable future. During the growing season, variability in the height of crops provides important information on plant health, growth, and response to environmental effects. This paper indicates the feasibility of using structure from motion (SfM) on images collected from 120 m above ground level (AGL) with a fixed-wing unmanned aerial vehicle (UAV) to estimate sorghum plant height with reasonable accuracy on a relatively large farm field. Correlations between UAV-based estimates and ground truth were strong on all dates (R² > 0.80) but are clearly better on some dates than others. Furthermore, a new method for improving UAV-based plant height estimates with multi-level ground control points (GCPs) was found to lower the root mean square error (RMSE) by about 20%. These results indicate that GCP-based height calibration has a potential for future application where accuracy is particularly important. Lastly, the image blur appeared to have a significant impact on the accuracy of plant height estimation. A strong correlation (R² = 0.85) was observed between image quality and plant height RMSE and the influence of wind was a challenge in obtaining high-quality plant height data. A strong relationship (R² = 0.99) existed between wind speed and image blurriness.

Classification of Tree Species in Overstorey Canopy of Subtropical Forest Using QuickBird Images.

This paper proposes a supervised classification scheme to identify 40 tree species (2 coniferous, 38 broadleaf) belonging to 22 families and 36 genera in high spatial resolution QuickBird multispectral images (HMS). Overall kappa coefficient (OKC) and species conditional kappa coefficients (SCKC) were used to evaluate classification performance in training samples and estimate accuracy and uncertainty in test samples. Baseline classification performance using HMS images and vegetation index (VI) images were evaluated with an OKC value of 0.58 and 0.48 respectively, but performance improved significantly (up to 0.99) when used in combination with an HMS spectral-spatial texture image (SpecTex). One of the 40 species had very high conditional kappa coefficient performance (SCKC ≥ 0.95) using 4-band HMS and 5-band VIs images, but, only five species had lower performance (0.68 ≤ SCKC ≤ 0.94) using the SpecTex images. When SpecTex images were combined with a Visible Atmospherically Resistant Index (VARI), there was a significant improvement in performance in the training samples. The same level of improvement could not be replicated in the test samples indicating that a high degree of uncertainty exists in species classification accuracy which may be due to individual tree crown density, leaf greenness (inter-canopy gaps), and noise in the background environment (intra-canopy gaps). These factors increase uncertainty in the spectral texture features and therefore represent potential problems when using pixel-based classification techniques for multi-species classification.