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1.
Peptides ; 22(12): 2145-9, 2001 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-11786202

RESUMEN

To determine how ligand-receptor interaction is affected by the charges of the amino acids at position 2 of the ligands and position 297 of the AT2 receptor, we generated the Asp297Lys mutant of AT2 and a ligand SarAsp(2)Ile. Asp297Lys mutant lost affinity to Ang II and SarIle however retained partial affinity to 125I-CGP42112A. The SarAsp(2)Ile had high affinity to Asp297Lys (IC(50)3.5nM) and partial affinity to the AT2 (IC(50)15nM). Therefore, not only the charge, but also the length of the side arms of the amino acids at position 2 of the ligand and position 297 of the receptor affect their interaction.


Asunto(s)
Ácido Aspártico/metabolismo , Receptores de Angiotensina/metabolismo , Secuencia de Aminoácidos , Ligandos , Datos de Secuencia Molecular , Unión Proteica , Receptores de Angiotensina/química
2.
FEBS Lett ; 482(1-2): 149-53, 2000 Sep 29.
Artículo en Inglés | MEDLINE | ID: mdl-11018539

RESUMEN

Azotobacter vinelandii carries three different and genetically distinct nitrogenase systems on its chromosome. Expression of all three nitrogenases is repressed by high concentrations of fixed nitrogen. Expression of individual nitrogenase systems is under the control of specific metal availability. We have isolated a novel type of A. vinelandii DJ54 revertant, designated A. vinelandii BG54, which carries a defined deletion in the nifH gene and is capable of diazotrophic growth in the presence of molybdenum. Inactivation of nifDK has no effect on growth of this mutant strain in nitrogen-free medium suggesting that products of the nif system are not involved in supporting diazotrophic growth of A. vinelandii BG54. Similar to the wild type, A. vinelandii BG54 is also sensitive to 1 mM tungsten. Tn5-B21 mutagenesis to inactivate the genes specific to individual systems revealed that the structural genes for vnf nitrogenase are required for diazotrophic growth of A. vinelandii BG54. Analysis of promoter activity of different nif systems revealed that the vnf promoter is activated in A. vinelandii BG54 in the presence of molybdenum. Based on these data we conclude that A. vinelandii BG54 strain utilizes vnf nitrogenase proteins to support its diazotrophic growth.


Asunto(s)
Azotobacter vinelandii/enzimología , Azotobacter vinelandii/genética , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Molibdeno/farmacología , Nitrogenasa/genética , Azotobacter vinelandii/crecimiento & desarrollo , Cromosomas Bacterianos/genética , Intercambio Genético , Regulación Enzimológica de la Expresión Génica/efectos de los fármacos , Genotipo , Proteínas Recombinantes de Fusión/metabolismo , Recombinación Genética , Mapeo Restrictivo , beta-Galactosidasa/genética , beta-Galactosidasa/metabolismo
3.
FEBS Lett ; 478(1-2): 192-6, 2000 Jul 28.
Artículo en Inglés | MEDLINE | ID: mdl-10922495

RESUMEN

Azotobacter vinelandii UW97 is defective in nitrogen fixation due to a replacement of serine at position 44 by phenylalanine in the Fe-protein [Pulakat, L., Hausman, B.S., Lei, S. and Gavini, N. (1996) J. Biol. Chem. 271, 1884-1889]. Serine residue 44 is located in a conserved domain that links the nucleotide binding site and the MoFe-protein docking surface of the Fe-protein. Therefore, it is possible that the loss of function by A. vinelandii UW97-Fe-protein may be caused by global conformational disruption or disruption of the conformational change upon MgATP binding. To determine whether it is possible to generate a functional nitrogenase complex via a compensating second site mutation(s) in the Fe-protein, we have attempted to isolate genetic revertants of A. vinelandii UW97 that can grow on nitrogen-free medium. One such revertant, designated A vinelandii BG9, encoded a Fe-protein that retained the Ser44Phe mutation and also had a second mutation that caused the replacement of a lysine at position 170 by glutamic acid. Lysine 170 is highly conserved and is located in a conserved region of the Fe-protein. This region is implicated in stabilizing the MgATP-induced conformation of the Fe-protein and in docking to the MoFe-protein. Further complementation analysis showed that the Fe-protein mutant that retained serine 44 but contained the substitution of lysine at position 170 by glutamic acid was also non-functional. Thus, neither Ser44Phe nor Lys170Glu mutants of Fe-protein were functional; however, the Fe-protein in A. vinelandii BG9 that contained both substitutions could support diazotrophic growth on the strain.


Asunto(s)
Azotobacter vinelandii/enzimología , Azotobacter vinelandii/crecimiento & desarrollo , Oxidorreductasas/genética , Oxidorreductasas/metabolismo , Supresión Genética/genética , Adenosina Trifosfato/metabolismo , Sustitución de Aminoácidos/genética , Azotobacter vinelandii/genética , Azotobacter vinelandii/metabolismo , Secuencia Conservada/genética , Modelos Moleculares , Molibdoferredoxina/metabolismo , Nitrógeno/metabolismo , Oxidorreductasas/química , Fenotipo , Conformación Proteica
4.
Regul Pept ; 87(1-3): 73-82, 2000 Feb 08.
Artículo en Inglés | MEDLINE | ID: mdl-10710290

RESUMEN

To identify the proteins that interact and mediate angiotensin II receptor AT2-specific signaling, a random peptide library was screened by yeast-based Two-Hybrid protein-protein interaction assay technique. A peptide that shared significant homology with the amino acids located between the residues Gly-Xaa-Gly-Xaa-Xaa-Gly721 and Lys742, the residues predicted to be important for ATP binding of the ErbB3 and ErbB2 receptors, was identified to be interacting with the AT2 receptor. The interaction between the human ErbB3 receptor and the AT2 receptor was further confirmed using the cytoplasmic domain (amino acids 671-782) of the human ErbB3 receptor. Moreover, an AT2 receptor peptide that spans the amino acids 226-363, (spans the third ICL and carboxy terminal domain) could also interact with the AT2 receptor in a yeast Two-Hybrid protein-protein interaction assay. Studies using mutated and chimeric AT2 receptors showed that replacing the third intracellular loop (ICL) of the AT2 receptor with that of the AT1 abolishes the interaction between the ErbB3 and the AT2 in yeast Two-Hybrid protein-protein interaction assay. Thus the interaction between the AT2 receptor and the ErbB3 receptor seems to require the region spanning the third ICL and carboxy terminus of the AT2 receptor. Since the third ICL of the AT2 receptor is essential for exerting its inhibitory effects on cell growth, possible involvement of this region in the interaction with the cytoplasmic domain of the ErbB3 receptor suggests a novel signaling mechanism for the AT2 receptor mediated inhibition of cell growth. Furthermore, since both the AT2 and the ErbB3 receptors are expressed during fetal development, we propose that the existence of direct interaction between these two receptors may play a role in the regulation of growth during the initial stages of development.


Asunto(s)
Receptor ErbB-3/metabolismo , Receptores de Angiotensina/metabolismo , Secuencia de Aminoácidos , Animales , Sitios de Unión , Clonación Molecular , Citoplasma/metabolismo , Receptores ErbB/metabolismo , Humanos , Datos de Secuencia Molecular , Ratas , Receptor de Angiotensina Tipo 1 , Receptor de Angiotensina Tipo 2 , Receptor ErbB-3/genética , Receptores de Angiotensina/genética , Saccharomyces cerevisiae , Xenopus laevis
5.
Genetica ; 110(2): 101-7, 2000.
Artículo en Inglés | MEDLINE | ID: mdl-11678500

RESUMEN

Several lines of experimental analyses on the ploidy status of Azotobacter vinelandii genome lead to the conclusion that it contains more than 40 copies of its chromosome and therefore it is a polyploid organism. The genetic evidence argues against the existence of polyploidy in these cells since the segregation pattern of genetic markers under lack of selection pressure mimic that of haploids. However, when A. vinelandii was made Nif- by inserting a kanamycin resistance marker gene in the nifDK sequence and the cells were selected for kanamycin resistance and Nif+ phenotype, we were able to score colonies that are both kanamycin resistant and Nif+. Therefore, when the cells were subjected to forced double selection of the same locus, they behaved as if they carried at least two chromosomes, one carrying the kanamycin resistance marker in the nifDK genes and the other carrying the intact nifDK genes. These analyses suggested that at least a diploidy status can be induced in these cells under selection pressure.


Asunto(s)
Azotobacter vinelandii/genética , Azotobacter vinelandii/aislamiento & purificación , Genes Bacterianos , Fijación del Nitrógeno/genética , Ploidias , Azotobacter vinelandii/metabolismo , Secuencia de Bases , Cromosomas Bacterianos/genética , Cartilla de ADN/genética , Diploidia , Haploidia , Resistencia a la Kanamicina/genética , Plásmidos/genética , Poliploidía
6.
Biochem Biophys Res Commun ; 264(1): 186-90, 1999 Oct 14.
Artículo en Inglés | MEDLINE | ID: mdl-10527862

RESUMEN

Azotobacter is a diazotrophic bacterium that harbors three genetically distinct nitrogenases referred to as nif, vnf, and anf systems. The nifM is an accessory gene located in the nif gene cluster and is transcriptionally regulated by the NifA. However, Azotobacter mutants that lack NifA are known to synthesize functional NifM and this accessory protein is known to be needed for the activity of nitrogenase-2 and nitrogenase-3. To determine how the transcription of nifM is regulated when Azotobacter is grown under conditions in which nitrogenase-2 or nitrogenase-3 is expressed, we generated an Azotobacter vinelandii strain that carries a nifM:lacZ-kanamycin resistance gene cassette in its chromosome. In this strain the nifM open reading frame was disrupted by the presence of a lacZ-kanamycin resistance gene cassette so that it could not produce active NifM. Moreover, the lacZ gene was placed under the transcriptional control elements of the nifM gene so that the lacZ expression could be used as a marker to determine the extent of expression of the nifM gene under different growth conditions. Our results show that this strain was unable to grow in Burk's nitrogen-free medium supplemented with either molybdenum or vanadium or lacking both metals suggesting that in the absence of functional NifM none of the nitrogenases were active. It was also found that the nifM expression was differentially regulated when the A. vinelandii cells were grown under conditions that activate nitrogenase-2 and nitrogenase-3, as determined by liquid beta-galactosidase activity measurements. These results suggest that the transcriptional activators, VnfA and AnfA, may regulate the nifM expression.


Asunto(s)
Azotobacter vinelandii/efectos de los fármacos , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Molibdeno/farmacología , Nitrogenasa/genética , Vanadio/farmacología , Azotobacter vinelandii/enzimología , Azotobacter vinelandii/genética , Proteínas Bacterianas/metabolismo , Secuencia de Bases , Sitios de Unión , Medios de Cultivo/farmacología , ADN Bacteriano/análisis , Proteínas de Unión al ADN/metabolismo , Resistencia a la Kanamicina/genética , Operón Lac , Datos de Secuencia Molecular , Familia de Multigenes , Nitrogenasa/metabolismo , Sistemas de Lectura Abierta , Transactivadores/metabolismo , Factores de Transcripción/metabolismo
7.
J Bacteriol ; 181(20): 6535-9, 1999 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-10515947

RESUMEN

In diazotrophic organisms, nitrogenase synthesis and activity are tightly regulated. Two genes, nifL and nifA, are implicated as playing a major role in this regulation. NifA is a transcriptional activator, and its activity is inhibited by NifL in response to availability of excess fixed nitrogen and high O(2) tension. It was postulated that NifL binds to NifA to inhibit NifA-mediated transcriptional activation of nif genes. Mutational analysis combined with transcriptional activation studies clearly is in agreement with the proposal that NifL interacts with NifA. However, several attempts to identify NifA-NifL interactions by using methods such as coimmunoprecipitations and chemical cross-linking experiments failed to detect direct interactions between these proteins. Here we have taken a genetic approach, the use of a yeast two-hybrid protein-protein interaction assay system, to investigate NifL interaction with NifA. A DNA fragment corresponding to the kinase-like domain of nifL was PCR amplified and was used to generate translation fusions with the DNA binding domain and the DNA activation domain of the yeast transcriptional activator GAL4 in yeast two-hybrid vectors. Similarly, a DNA fragment corresponding to the catalytic domain of nifA was PCR amplified and used to generate translation fusions with the DNA-binding domain and the DNA-activation domain of GAL4 in yeast two-hybrid vectors. After introducing appropriate plasmid combinations in yeast cells, the existance of direct interaction between NifA and NifL was analyzed with the MATCHMAKER yeast two-hybrid system by testing for the expression of lacZ and his3 genes. These analyses showed that the kinase-like domain of NifL directly interacts with the catalytic domain of NifA.


Asunto(s)
Azotobacter vinelandii/genética , Proteínas Bacterianas/metabolismo , Regulación Bacteriana de la Expresión Génica , Genes Bacterianos , Genes Reguladores , Fijación del Nitrógeno/genética , Factores de Transcripción/metabolismo , Secuencia de Aminoácidos , Azotobacter vinelandii/enzimología , Secuencia de Bases , Genes Reporteros , Datos de Secuencia Molecular , Nitrogenasa/biosíntesis , Unión Proteica , Técnicas del Sistema de Dos Híbridos
8.
Biochem Biophys Res Commun ; 263(3): 816-9, 1999 Oct 05.
Artículo en Inglés | MEDLINE | ID: mdl-10512763

RESUMEN

The phenolic side chain of Tyr(4) present in Ang II is proposed to interact with the side chain of Arg 167 of the AT1 receptor. To determine the contribution of the analogous Arg182 in the ligand-binding properties of the AT2, we replaced the Arg182 with Glu and Ala, and analyzed the ligand-binding properties. Our results suggest that replacing Arg182 with either Glu or Ala abolished the ability of the AT2 receptor to bind the nonspecific peptidic ligands, (125)I-Ang II and [(125)I-Sar(1)-Ile(8)]Ang II, as well as the AT2 receptor-specific peptidic ligand (125)I-CGP42112A. We have shown previously that replacing the positively charged side chain of Lys215 with the negatively charged side chain of Glu in the fifth TMD did not alter the high affinity binding of (125)I-CGP42112A to the AT2 receptor. However, ligand-binding properties of the Arg182Glu mutant suggest that positively charged side chain of Arg182 located in the junction of second ECL and the fourth TMD is critical for high affinity binding of all three peptidic ligands to the AT2 receptor.


Asunto(s)
Arginina , Receptores de Angiotensina/química , Receptores de Angiotensina/metabolismo , Secuencia de Aminoácidos , Sustitución de Aminoácidos , Angiotensina II/metabolismo , Animales , Sitios de Unión , Cartilla de ADN , Femenino , Ligandos , Modelos Moleculares , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Oocitos/fisiología , Reacción en Cadena de la Polimerasa , Estructura Secundaria de Proteína , Ratas , Receptor de Angiotensina Tipo 2 , Receptores de Angiotensina/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Xenopus laevis
9.
Biochem Biophys Res Commun ; 257(3): 704-7, 1999 Apr 21.
Artículo en Inglés | MEDLINE | ID: mdl-10208847

RESUMEN

Angiotensin II receptor subtypes AT1 and AT2 are proteins with seven transmembrane domain (TMD) topology and share 34% homology. It was shown that His256, located in the sixth TMD of the AT1 receptor, is needed for the agonist activation by the Phe8 side chain of angiotensin II, although replacing this residue with arginine or glutamine did not significantly alter the affinity binding of the receptor. We hypothesized that the His273 located in the sixth transmembrane domain of the AT2 receptor may play a similar role in the functions of the AT2 receptor, although this residue was not identified as a conserved residue in the initial homology comparisions. Therefore, we replaced His273 of the AT2 receptor with arginine or glutamine and analyzed the ligand-binding properties of the mutant receptors using Xenopus oocytes as an expression system. Our results suggested that the AT2 receptor mutants His273Arg and His273 Glu have lost their affinity to [125I-Sar1-Ile8]Ang II, a peptidic ligand that binds both the AT1 and AT2 receptors and to 125I-CGP42112A, a peptidic ligand that binds specifically to the AT2 receptor. Thus, His273 located in the sixth TMD of the AT2 receptor seems to play an important role in determining the binding properties of this receptor. Moreover, these results along with our previous observation that the Lys215 located in the 5th TMD of the AT2 receptor is essential for its high affinity binding to [125I-Sar1-Ile8]Ang II indicate that key amino acids located in the 5th and 6th TMDs of the AT2 receptor are needed for high affinity binding of the AT2 to its ligands.


Asunto(s)
Membrana Celular/metabolismo , Histidina/metabolismo , Receptores de Angiotensina/metabolismo , Sustitución de Aminoácidos , Angiotensina II/análogos & derivados , Angiotensina II/metabolismo , Animales , Sitios de Unión , Histidina/genética , Ligandos , Lisina/genética , Lisina/metabolismo , Oligopéptidos/metabolismo , Oocitos/metabolismo , ARN Mensajero/administración & dosificación , ARN Mensajero/genética , Ratas , Receptor de Angiotensina Tipo 1 , Receptor de Angiotensina Tipo 2 , Receptores de Angiotensina/química , Receptores de Angiotensina/genética , Saralasina , Relación Estructura-Actividad , Xenopus laevis
10.
FEBS Lett ; 445(1): 23-6, 1999 Feb 19.
Artículo en Inglés | MEDLINE | ID: mdl-10069367

RESUMEN

Angiotensin II (Ang II) receptor subtypes AT1 and AT2 share 34% overall homology, but the least homology is in their third intracellular loop (3rd ICL). In an attempt to elucidate the role of the 3rd ICL in determining the similarities and differences in the functions of the AT1 and the AT2 receptors, we generated a chimeric receptor in which the 3rd ICL of the AT2 receptor was replaced with that of the AT1 receptor. Ligand-binding properties and signaling properties of this receptor were assayed by expressing this receptor in Xenopus oocytes. Ligand-binding studies using [125I-Sar1-Ile8] Ang II, a peptidic ligand that binds both the AT1 and the AT2 receptor subtypes, and 125I-CGP42112A, a peptidic ligand that is specific for the AT2 receptor, showed that the chimeric receptor has lost affinity to both ligands. However, IP3 levels of the oocytes expressing the chimeric receptor were comparable to the IP3 levels of the oocytes expressing the AT1 receptor, suggesting that the chimeric receptors could couple to phospholipase C pathway in response to Ang II. We have shown previously that the nature of the amino acid present in the position 215 located in the fifth transmembrane domain (TMD) of the AT2 receptor plays an important role in determining its affinity to different ligands. Our results from the ligand-binding studies of the chimeric receptor further support the idea that the structural organization of the region spanning the 5th TMD and the 3rd ICL of the AT2 receptor has an important role in determining the ligand-binding properties of this receptor.


Asunto(s)
Receptores de Angiotensina/metabolismo , Secuencia de Aminoácidos , Animales , Sitios de Unión , Líquido Intracelular , Ligandos , Datos de Secuencia Molecular , Receptor de Angiotensina Tipo 2 , Receptores de Angiotensina/genética , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Fosfolipasas de Tipo C/metabolismo , Xenopus
11.
Biochem Biophys Res Commun ; 245(2): 572-82, 1998 Apr 17.
Artículo en Inglés | MEDLINE | ID: mdl-9571197

RESUMEN

We report the identification of rfbF and rfbC located adjacent to the previously identified rfbG (Gavini et. al. Biochem. Biophys. Res. Commun. 1997, 240, 153-161) from the non-symbiotic, non-pathogenic soil bacterium Azotobacter vinelandii. The rfbF open reading frame encodes a putative polypeptide of 256 amino acids. This polypeptide shares a homology of 74% with the RfbF of Synechocystis sp. and a 70% homology with the AscA of Yersinia pseudotuberculosis which function as alpha-D-glucose-1-phosphate cytidylyltransferases in the biosynthesis of the O-antigen. The rfbC encodes a putative polypeptide of 186 amino acids. It shows strongest homology to the RfbC of Synechocystis sp. (64%) and Salmonella typhimurium (40%). RfbC functions as a dTDP-4-Dehydrorhamnose 3,5-Epimerase. The genes identified here have a low G + C content (approximately 56%) as compared to the A. vinelandii chromosome (approximately 63%) which is characteristic of the rfb clusters identified in other bacteria and may be indicative of the acquisition of the rfb genes by interspecific gene transfer. Despite the high level of sequence conservation, the organization of the rfb genes in A. vinelandii deviates from the arrangement of the most thoroughly studied rfb gene clusters of Enterobacteriaceae.


Asunto(s)
Antígenos Bacterianos , Azotobacter vinelandii/genética , Proteínas Bacterianas/química , Secuencia de Aminoácidos , Secuencia de Bases , Carbohidrato Epimerasas/química , Clonación Molecular , Enterobacteriaceae/genética , Genes Bacterianos/genética , Datos de Secuencia Molecular , Antígenos O/biosíntesis , Alineación de Secuencia , Análisis de Secuencia de ADN
12.
Regul Pept ; 73(1): 51-7, 1998 Jan 02.
Artículo en Inglés | MEDLINE | ID: mdl-9537673

RESUMEN

Studies on ligand-receptor interaction of Angiotensin II (Ang II) receptor type 1 have shown that for peptidic ligands to bind this receptor they must interact via their C-terminal carboxylate group to the positively charged side chain of the Lysine residue 199 located in the fifth transmembrane domain of this receptor. In the Ang II receptor type AT2, this Lysine residue is conserved at position 215 in the fifth transmembrane domain. To determine the specific mechanism of ligand binding to the Angiotensin II receptor type AT2, mutated AT2 receptors were generated in which the Lys215 was replaced with glutamic acid, glutamine, alanine and arginine. The ability of these mutated receptors to bind peptidic ligands 125I-[Sar1-Ile8]Ang II (non-specific for AT2 receptor type), 125I-CGP42112A (AT2 receptor specific) and the non-peptidic ligand PD123319 (AT2 receptor specific) was evaluated by expressing these receptors in Xenopus oocytes and performing binding assays. The Lys215Glu and Lys215Gln mutants of AT2 receptor lost their affinity to 125I-[Sar1-Ile8]Ang II, but retained their affinity to 125I-CGP42112A and PD123319. In contrast, Lys215Arg mutant retained its affinity to 125I-[Sar1-Ile8]Ang II, but exhibited lower affinity to 125I-CGP42112A. The Lys215Ala mutant lost its affinity to both 125I-[Sar1-Ile8]Ang II and 125I-CGP42112A. These results suggest that the binding mechanism of 125I-[Sar1-Ile8]Ang II to AT2 receptor is similar to that of AT1 receptor since an amino acid with positively charged side chain (Lys or Arg) located in the fifth transmembrane domain is required for this ligand to bind AT2 receptor. In contrast, although CGP42112A is a peptidic ligand, it does not require an interaction between its C-terminal carboxylate group and the positively charged side-chain of an amino acid in the fifth transmembrane domain for its binding to AT2 receptor.


Asunto(s)
Lisina/genética , Mutación , Receptores de Angiotensina/metabolismo , 1-Sarcosina-8-Isoleucina Angiotensina II/metabolismo , Secuencia de Aminoácidos , Angiotensina II/antagonistas & inhibidores , Bloqueadores del Receptor Tipo 2 de Angiotensina II , Antagonistas de Receptores de Angiotensina , Animales , Sitios de Unión , Imidazoles/metabolismo , Ligandos , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Oligopéptidos/metabolismo , Conformación Proteica , Piridinas/metabolismo , Ratas , Receptor de Angiotensina Tipo 2 , Receptores de Angiotensina/agonistas , Receptores de Angiotensina/genética , Proteínas Recombinantes/metabolismo
13.
FEMS Microbiol Lett ; 160(2): 247-52, 1998 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-9532744

RESUMEN

It was suggested that Azotobacter vinelandii cells contain about 80 copies of their chromosome and when foreign genes are introduced into the cell, it took several generations for them to spread to all 80 chromosomes even in the presence of selection. In contrast, the fact that many recessive mutants can be isolated from A. vinelandii without the constraints expected for a cell that has 80 copies of its chromosome argued against this organism being highly polyploid. We have investigated the segregation of a kanamycin resistant genetic marker under non-selective conditions in A. vinelandii. Plasmid DNA was used to introduce the kanamycin resistance gene onto the A. vinelandii chromosome at the nifY locus by homologous recombination. The transformants were identified from non-transformants with the aid of replica plating, and hence the colonies examined for segregation of the genetic marker were never subjected to kanamycin selection. In spite of growing the transformants in the absence of selection pressure, no segregant that lacked the kanamycin resistance gene was scored. These analyses suggested that the segregation of the kanamycin marker in A. vinelandii did not exhibit any constraints expected in a highly polyploid bacterium.


Asunto(s)
Azotobacter vinelandii/genética , Resistencia a la Kanamicina/genética , Cromosomas Bacterianos/genética , Recuento de Colonia Microbiana , Genes Bacterianos , Marcadores Genéticos , Fijación del Nitrógeno/genética , Plásmidos , Poliploidía , Transformación Bacteriana
14.
Biochem Biophys Res Commun ; 244(2): 498-504, 1998 Mar 17.
Artículo en Inglés | MEDLINE | ID: mdl-9514861

RESUMEN

Nitrogenase is a complex metalloenzyme composed of two separately purified proteins designated the Fe-protein and the MoFe-protein. Apart from these two proteins, a number of accessory proteins are essential for the maturation and assembly of nitrogenase. Even though experimental evidence suggests that these accessory proteins are required for nitrogenase activity, the exact roles played by many of these proteins in the functions of nitrogenase are unclear. Our studies were directed to understand the role of two nif accessory proteins, the NifW and the NifZ in the biological nitrogen fixation. To accomplish this, we have utilized a genetic method, the Yeast based Two-Hybrid protein-protein interaction assay. This analysis showed that the NifW could interact with itself to make a multimeric complex. In contrast, the NifZ could not interact with itself. However, the NifZ could interact with the NifW. Previously it was shown that mutating either the NifW or the NifZ have similar effects on the activity of nitrogenase. This observation indicated that both these proteins may exert their regulation on the nitrogenase by a common pathway. Furthermore, it was suggested that the NifW plays a role in the oxygen-protection of the MoFe-protein by direct physical interaction. Our observation that the NifW can interact with itself as well as with the NifZ, suggests that the NifW and the NifZ may form a higher order complex and such a complex may be needed to exert the effects of the NifW or the NifZ on the nitrogenase activity.


Asunto(s)
Azotobacter vinelandii/enzimología , Azotobacter vinelandii/genética , Proteínas Bacterianas/genética , Nitrogenasa/genética , Secuencia de Aminoácidos , Fusión Artificial Génica , Proteínas Bacterianas/química , Proteínas Bacterianas/metabolismo , Secuencia de Bases , Cartilla de ADN/genética , Genes Bacterianos , Sustancias Macromoleculares , Datos de Secuencia Molecular , Peso Molecular , Fijación del Nitrógeno , Nitrogenasa/química , Nitrogenasa/metabolismo , Reacción en Cadena de la Polimerasa , Conformación Proteica , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Saccharomyces cerevisiae/genética , beta-Galactosidasa/química , beta-Galactosidasa/genética , beta-Galactosidasa/metabolismo
15.
Biochem Biophys Res Commun ; 239(2): 393-400, 1997 Oct 20.
Artículo en Inglés | MEDLINE | ID: mdl-9344840

RESUMEN

The lep of Azotobacter vinelandii is an 852-base-pair open reading frame (ORF) which encodes a protein of 284 amino acid residues. The translated protein shares 75% homology with leader peptidase I isolated from Pseudomonas fluorescens and 37% homology with leader peptidase I isolated from Escherichia coli. Five highly conserved regions found in the family of leader peptidase I proteins are conserved in A. vinelandii Lep. The putative membrane topology of the protein seems similar to that of E. coli leader peptidase I based on the hydrophobicity analysis of the predicted amino acid sequence. Southern blotting analysis of the A. vinelandii chromosome by probing with lep specific DNA revealed that lep is present as a single copy per the chromosome. A multicopy plasmid carrying A. vinelandii lep could complement a temperature sensitive lep mutant of E. coli strain IT41, suggesting that we have identified the functional copy of lep present on A. vinelandii genome.


Asunto(s)
Azotobacter vinelandii/genética , Proteínas Bacterianas/genética , Genes Bacterianos , Prueba de Complementación Genética , Análisis de Secuencia de ADN , Serina Endopeptidasas/genética , Secuencia de Aminoácidos , Azotobacter vinelandii/enzimología , Proteínas Bacterianas/química , Proteínas Bacterianas/aislamiento & purificación , Secuencia de Bases , Clonación Molecular , Proteínas de la Membrana/química , Proteínas de la Membrana/genética , Proteínas de la Membrana/aislamiento & purificación , Datos de Secuencia Molecular , Homología de Secuencia de Aminoácido , Serina Endopeptidasas/química , Serina Endopeptidasas/aislamiento & purificación
16.
Biochem Biophys Res Commun ; 240(1): 153-61, 1997 Nov 07.
Artículo en Inglés | MEDLINE | ID: mdl-9367902

RESUMEN

We have identified the rfbG from a non-symbiotic and non-pathogenic soil bacterium, Azotobacter vinelandii. The nucleotide sequence analysis of the rfbG revealed an open reading frame that encodes a peptide of 360 amino acids. This deduced peptide shares 57% homology with the RfbG of Synechocystis and 47% homology with the RfbG of Yersinia pseudotuberculosis. The previously identified short-chain dehydrogenases/reductases family signature sequence is conserved in the sequence of the RfbG of A. vinelandii. Southern blotting analysis of A. vinelandii chromosome by probed with 1.1 kb PstI DNA fragment corresponding to rfbG revealed that it is present as single copy on A. vinelandii chromosome. Disrupting the rfbG present on the chromosome of A. vinelandii, by insertion of kanamycin resistance marker via homologous recombination, resulted in drastic changes in the growth characteristics. The rfbG-negative A. vinelandii grown in liquid medium exhibited agglutination that is characteristic of rfb- mutants of other bacteria, suggesting that we have cloned the functional copy of the rfbG of A. vinelandii.


Asunto(s)
Azotobacter vinelandii/enzimología , Azotobacter vinelandii/genética , Proteínas Bacterianas/genética , Genes Bacterianos , Hidroliasas/genética , Secuencia de Aminoácidos , Proteínas Bacterianas/química , Proteínas Bacterianas/aislamiento & purificación , Secuencia de Bases , Clonación Molecular , Análisis Mutacional de ADN , Genes Bacterianos/fisiología , Hidroliasas/aislamiento & purificación , Datos de Secuencia Molecular , Antígenos O/química , Alineación de Secuencia , Microbiología del Suelo
17.
J Biol Chem ; 271(4): 1884-9, 1996 Jan 26.
Artículo en Inglés | MEDLINE | ID: mdl-8567634

RESUMEN

We have identified the molecular basis for the nitrogenase negative phenotype exhibited by Azotobacter vinelandii UW97. This strain was initially isolated following nitrosoguanidine mutagenesis. Recently, it was shown that this strain lacks the Fe protein activity, which results in the synthesis of a FeMo cofactor-deficient apodinitrogenase. Activation of this apodinitrogenase requires the addition of both MgATP and wild-type Fe protein to the crude extracts made by A. vinelandii UW97 (Allen, R.M., Homer, M.J., Chatterjee R., Ludden, P.W., Roberts, G.P., and Shah, V.K. (1993) J. Biol. Chem. 268 23670-23674). Earlier, we proposed the sequence of events in the MoFe protein assembly based on the biochemical and spectroscopic analysis of the purified apodinitrogenase from A. vinelandii DJ54 (Gavini, N., Ma, L., Watt, G., and Burgess, B.K. (1994) Biochemistry 33, 11842-11849). Taken together, these results imply that the assembly process of apodinitrogenase is arrested at the same step in both of these strains. Since A. vinelandii DJ54 is a delta nifH strain, this strain is not useful in identifying the features of the Fe protein involved in the MoFe protein assembly. Here, we report a systematic analysis of an A. vinelandii UW97 mutant and show that, unlike A. vinelandii DJ54, the nifH gene of A. vinelandii UW97 has no deletion in either coding sequence or the surrounding sequences. The specific mutation responsible for the Nif- phenotype of A. vinelandii UW97 is the substitution of a non-conserved serine at position 44 of the Fe protein by a phenylalanine as shown by DNA sequencing. Furthermore, oligonucleotide site-directed mutagenesis was employed to confirm that the Nif- phenotype in A. vinelandii UW97 is exclusively due to the substitution of the Fe protein residue serine 44 by phenylalanine. By contrast, replacing Ser-44 with alanine did not affect the Nif phenotype of A. vinelandii. Therefore, it seems that the Nif- phenotype of A. vinelandii UW97 is caused by a general structural disturbance of the Fe protein due to the presence of the bulky phenylalanine at position 44.


Asunto(s)
Azotobacter vinelandii/genética , Genes Bacterianos , Fijación del Nitrógeno/genética , Secuencia de Aminoácidos , Secuencia de Consenso , Datos de Secuencia Molecular , Molibdoferredoxina/metabolismo , Mutagénesis Sitio-Dirigida , Nitrogenasa/genética , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Relación Estructura-Actividad
18.
J Basic Microbiol ; 36(4): 229-34, 1996.
Artículo en Inglés | MEDLINE | ID: mdl-8765082

RESUMEN

Previous experiments by other investigators on the DNA content of Azotobacter vinelandii have demonstrated that the DNA content in these cells is several folds higher than that of E. coli. On the basis of this observation, it was hypothesized that A. vinelandii has at least 40 to 80 identical chromosomes per cell. However, the gene dosage analysis in A. vinelandii cells suggested that many genetic operations can be performed in these cells without the constraints expected in a polyploid bacterium. In an attempt to explain this apparent discrepancy, we have done systematic analysis of the relationship between the DNA content and the cell volume of this bacterium. Since a linear correlation is observed between the DNA content and the cell size in many other cell types, we hypothesized that if A. vinelandii is polyploid in nature, it should have a much larger cell volume to accommodate such a large amount of DNA. Our scanning electron microscopic analysis revealed that the cell volume of the vegetative cells of A. vinelandii is about 16 times larger than the cell volume of E. coli. This result is apparently consistent with the concept that the A. vinelandii is a polyploid bacterium. It was also reported that the encysted cells of A. vinelandii contain about 25% of the DNA content of the vegetative cells. This would mean that an encysted cell of A. vinelandii could contain about 10 copies of its chromosome. Since the estimated molecular weight of A. vinelandii chromosome is very similar to that of E. coli chromosome, the DNA content of the encysted cells also should be about 10 times higher than that of E. coli cells. If we assume that the relationship between the DNA content and the cell size is linear, then the encysted cells should have a cell volume larger than that of E. coli and smaller than that of the vegetative cells of A. vinelandii. However our scanning electron microscopic analysis showed that the cell volume of the encysted cells of A. vinelandii is in fact very similar to the cell volume of E. coli.


Asunto(s)
Azotobacter vinelandii/citología , Azotobacter vinelandii/genética , ADN Bacteriano/análisis , Genoma Bacteriano , Poliploidía , Azotobacter vinelandii/ultraestructura , Escherichia coli/citología , Escherichia coli/genética , Microscopía Electrónica de Rastreo
19.
Proc Natl Acad Sci U S A ; 91(9): 3774-8, 1994 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-8170986

RESUMEN

The existence and the properties of angiotensin II receptors in the adult bovine and human corpus callosum (CC) were investigated by using Xenopus oocytes and primary glial cell cultures. In oocytes injected with CC mRNA, angiotensin II elicited oscillatory Cl- currents due to activation of the inositol phosphate/Ca(2+)-receptor-channel coupling system. The receptors expressed in oocytes and in CC cultures were pharmacologically similar to the AT1 receptor type as assayed by binding. Northern blot analysis and in situ hybridization studies in sections from CC and in glial cultures revealed that the receptors were molecularly related to the AT1 receptor and that they were present in astrocytes. In these cells, activation of the receptors with angiotensin II increased de novo DNA synthesis, promoted the release of aldosterone, and induced c-Fos expression. These findings indicate that CC astrocytes possess functional AT1 receptors that participate in various physiological processes.


Asunto(s)
Angiotensina II/metabolismo , Cuerpo Calloso/metabolismo , Receptores de Angiotensina/metabolismo , Glándulas Suprarrenales , Aldosterona/metabolismo , Animales , Astrocitos/citología , Astrocitos/metabolismo , Bovinos , División Celular , Expresión Génica , Genes fos , Humanos , Hibridación in Situ , ARN Mensajero/genética , Ratas , Receptores de Angiotensina/genética , Xenopus laevis/genética
20.
J Biol Chem ; 267(4): 2240-3, 1992 Feb 05.
Artículo en Inglés | MEDLINE | ID: mdl-1370814

RESUMEN

The redundant genetic codons NNU and NNC (where N is A, T, G, or C) specify the same amino acid and are decoded by their cognate tRNAs, which contain either a guanosine or a modified base in the wobble position of the anticodons. Since tRNAs with an adenosine in the wobble position of the anticodon, which are complementary to the NNU codons, are not found naturally, we have generated a tRNA(Phe) with AAA anticodon and examined how an adenosine in the wobble position would affect its biological function in Escherichia coli. We found that the tRNA(Phe) with GAA anticodon (wild-type) repressed the expression of the pheA gene via tRNA(Phe)-mediated attenuation of transcription, whereas the tRNA(Phe) with AAA anticodon did not influence the expression of the pheA gene. Furthermore, elevated levels of tRNA(Phe)(AAA) did not support the growth of an E. coli strain carrying a temperature-sensitive mutation in the pheS gene at 42 degrees C. Since the presence of a multicopy plasmid carrying the gene that encodes tRNA(Phe)(GAA), a substrate for phenylalanyl tRNA synthetase, enables the E. coli strain carrying the pheS(Ts) mutation to grow at 42 degrees C, the above observation suggests that unlike tRNA(Phe)(GAA), tRNA(Phe)(AAA) is not a good substrate for phenylalanyl-tRNA synthetase. Therefore, we postulate that the presence of adenosine at the wobble position of anticodons was specifically eliminated and the tRNAs with guanosine or a modified base in the wobble position were selected to decode both NNU and NNC codons in E. coli.


Asunto(s)
Anticodón , Codón , Escherichia coli/genética , ARN de Transferencia de Fenilalanina/genética , ARN de Transferencia/genética , Secuencia de Bases , Genes Bacterianos , Datos de Secuencia Molecular , Mutación , Conformación de Ácido Nucleico , Plásmidos , ARN Bacteriano , Mapeo Restrictivo
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