Fertilizing-induced alterations of microbial functional profiles in soil nitrogen cycling closely associate with crop yield.

Fertilization and rhizosphere selection are key regulators for soil nitrogen (N) cycling and microbiome. Thus, clarifying how the overall N cycling processes and soil microbiome respond to these factors is a prerequisite for understanding the consequences of high inputs of fertilizers, enhancing crop yields, and formulating reasonable nitrogen management strategies under agricultural intensification scenarios. To do this, we applied shotgun metagenomics sequencing to reconstruct N cycling pathways on the basis of abundance and distribution of related gene families, as well as explored the microbial diversity and interaction via high throughput sequencing based on a two-decade fertilization experiment in Loess Plateau of China semiarid area. We found that bacteria and fungi respond divergent to fertilization regimes and rhizosphere selection, in terms of community diversity, niche breadth, and microbial co-occurrence networks. Moreover, organic fertilization decreased the complexity of bacterial networks but increased the complexity and stability of fungal networks. Most importantly, rhizosphere selection exerted more strongly influences on the soil overall nitrogen cycling than the application of fertilizers, accompanied by the increase in the abundance of nifH, NIT-6, and narI genes and the decrease in the abundance of amoC, norC, and gdhA genes in the rhizosphere soil. Furthermore, keystone families screening from soil microbiome (e.g., Sphingomonadaceae, Sporichthyaceae, and Mortierellaceae), which were affected by the edaphic variables, contributed greatly to crop yield. Collectively, our findings emphasize the pivotal roles of rhizosphere selection interacting with fertilization regimes in sustaining soil nitrogen cycling processes in response to decades-long fertilization, as well as the potential importance of keystone taxa in maintaining crop yield. These findings significantly facilitate our understanding of nitrogen cycling in diverse agricultural soils and lay a foundation for manipulating specific microorganisms to regulate N cycling and promote agroecosystem sustainability.

Soil pH determines arsenic-related functional gene and bacterial diversity in natural forests on the Taibai Mountain.

Arsenic-related functional genes are ubiquitous in microbes, and their distribution and abundance are influenced by edaphic factors. In arsenic-contaminated soils, soil arsenic content and pH determine the distribution of arsenic metabolizing microorganisms. In the uncontaminated natural ecosystems, however, it remains understudied for the key variable factor in determining the variation of bacterial assembly and mediating the arsenic biogeographical cycles. Here, we selected natural forest soils from southern and northern slopes along the altitudinal gradient of Taibai Mountain, China. The arsenic-related functional genes and soil bacterial community was examined using GeoChip 5.0 and high-throughput sequencing of 16S rRNA genes, respectively. It was found that arsenic-related functional genes were ubiquitous in tested forest soils. The gene arsB has the highest relative abundance, followed by arsC, aoxB, arrA, arsM, and arxA. The arsenic-related functional genes distribution on two slopes were decoupled from their corresponding bacterial community. Though there are higher abundance of bacterial communities on the northern slope than that on the southern slope, for arsenic-related functional genes, the abundance has the contrary trend which showing the more arsenic-related functional genes on the southern slope. In the top ten phyla, Proteobacteria and Actinobacteria were dominant phyla which affected the abundance of arsenic-related functional genes. Redundancy analysis and variance partitioning analysis indicated that soil pH, organic matter and altitude jointly determined the arsenic-related functional genes diversity in the two slopes of Taibai Mountain, and soil pH was a key factor. This indicates that the lower pH may shape more microbes with arsenic metabolic capacity. These findings suggested that soil pH plays a significant role in regulating the distribution of arsenic-related functional microorganisms, even for a forest ecosystem with an altitudinal gradient, and remind us the importance of pH in microbe mediated arsenic transformation.

Co-solidification of bauxite residue and coal ash into indurated monolith via ambient geopolymerisation for in situ environmental application.

Bauxite residues generated from alumina refineries worldwide have accumulated to more than 4 billion tons, at an annual increment of ~ 0.15 billion tons. It is imperative and urgent for the alumina sector to develop field-operable disposal solutions for rapid and cost-effective stabilisation of alkaline bauxite residues (BR) in the storage facility to minimise/prevent potential environmental risks. Taking advantage of the availability of coal ash (CA) on site, we studied a feasible way to synthesise geopolymer from active (amorphous) aluminosilicate components of BR and CA via the alkaline hydrolysis under ambient conditions. The new geopolymeric binder effectively solidifies BR-CA mixtures into indurated monoliths whose unconstrained compressive strength (UCS) can reach as high as ~ 20 MPa after 8 weeks. The Full Factorial Experimental Design was used to study relative influences of BR:CA ratio, modulus of activating solution, and H2O/Na2O ratio on UCS. Micro-spectroscopic structural analyses using electron-dispersive X-ray spectroscopy and X-ray Photoelectron Spectroscopy suggested a co-occurrence of cement-like calcium aluminosilicate hydrate (C-A-S-H) and Na-rich aluminosilicate 3D-extended network (geopolymer) within the binder phase. The advantage of this ambient geopolymerisation, without resorting to elevated temperature curing, renders a feasible way of valorising BR and CA for environmental management of alkaline wastes at alumina refineries.