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1.
BMC Genomics ; 25(1): 336, 2024 Apr 03.
Artículo en Inglés | MEDLINE | ID: mdl-38570743

RESUMEN

The Asian tiger mosquito, Aedes albopictus, is a global invasive species, notorious for its role in transmitting dangerous human arboviruses such as dengue and Chikungunya. Although hematophagous behavior is repulsive, it is an effective strategy for mosquitoes like Aedes albopictus to transmit viruses, posing a significant risk to human health. However, the fragmented nature of the Ae. albopictus genome assembly has been a significant challenge, hindering in-depth biological and genetic studies of this mosquito. In this research, we have harnessed a variety of technologies and implemented a novel strategy to create a significantly improved genome assembly for Ae. albopictus, designated as AealbF3. This assembly boasts a completeness rate of up to 98.1%, and the duplication rate has been minimized to 1.2%. Furthermore, the fragmented contigs or scaffolds of AealbF3 have been organized into three distinct chromosomes, an arrangement corroborated through syntenic plot analysis, which compared the genetic structure of Ae. albopictus with that of Ae. aegypti. Additionally, the study has revealed a phylogenetic relationship suggesting that the PGANT3 gene is implicated in the hematophagous behavior of Ae. albopictus. This involvement was preliminarily substantiated through RNA interference (RNAi) techniques and behavioral experiment. In summary, the AealbF3 genome assembly will facilitate new biological insights and intervention strategies for combating this formidable vector of disease. The innovative assembly process employed in this study could also serve as a valuable template for the assembly of genomes in other insects characterized by high levels of heterozygosity.


Asunto(s)
Aedes , Mosquitos Vectores , Animales , Humanos , Mosquitos Vectores/genética , Filogenia , Conducta Alimentaria
2.
J Cancer ; 15(4): 939-954, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38230214

RESUMEN

The disruption of zinc (Zn) homeostasis has been implicated in cancer development and progression through various signaling pathways. Maintaining intracellular zinc balance is crucial in the context of cancer. Human cells rely on two families of transmembrane transporters, SLC30A/ZNT and SLC39A/ZIP, to coordinate zinc homeostasis. While some ZNTs and ZIPs have been linked to cancer progression, limited information is available regarding the expression patterns of zinc homeostasis-related genes and their potential roles in predicting prognosis and developing therapeutic strategies for specific cancers. In this study, a systematic analysis was conducted to examine the expression of all genes from the SLC30A and SLC39A families at both mRNA and protein levels across different cancers. As a result, three SLC39A genes (SLC39A1, SLC39A4, and SLC39A8) were found to be significantly dysregulated in specific cancers, including cervical squamous cell carcinoma and endocervical adenocarcinoma (CESC), liver hepatocellular carcinoma (LIHC), pancreatic adenocarcinoma (PAAD), and kidney renal papillary cell carcinoma (KIRP). Moreover, the dysregulation of these genes was tightly associated with the prognosis of patients with those cancers. Furthermore, we found that the gene SLC39A8 exhibited the lowest mutation frequency in KIRP, whereas mutations in SLC39A4 were found to significantly impact overall survival (OS), disease-free (DF), and progress-free survival (PFS) in cancer patients, particularly in those with PAAD. Additionally, immune infiltration analysis revealed that SLC39A1, SLC39A4, and SLC39A8 may function as immune regulators in cancers. This provides new insights into understanding the complex relationship between zinc homeostasis and cancer progression.

3.
Sci Total Environ ; 912: 169102, 2024 Feb 20.
Artículo en Inglés | MEDLINE | ID: mdl-38056649

RESUMEN

Farming in protected areas frequently challenges ecological conservation goals while supporting local livelihoods. To balance protection and agriculture, a comprehensive understanding of cropland dynamics in protected areas is of paramount importance. However, studies addressing this trade-off are relatively scarce, especially considering explicit Chinese government regulations on population relocation and cropland retirement in National Protected Areas (NPAs). Our study examined the spatial and temporal pattern of cropland in NPAs and explored the covariance between cropland density and species richness. Concurrently, the driving factors of cropland development in NPAs were analyzed using Multiple Linear Regression. The results indicate that the cropland area in NPAs continued to expand, growing from 1.93 to 2.34 million hectares in 2000-2020, with a cropland density of approximately 0.4. Cropland expansion in the northern NPAs, particularly in the resource-rich Northeast (28.12 %) and the Northwest with high marginal agricultural returns (38.26 %), have encroached upon species habitats and aggravated biodiversity loss. Moreover, cities with higher cropland densities in NPAs are usually located at borders, possibly due to decentralized management. The Multiple Linear Regression results show that high cropland density is usually associated with a high population density (ß = 0.156) and lower levels of rural education (ß = -0.101) and income (ß = -0.122). To mitigate the issue of cropland development in NPAs, it is crucial to avoid one-size-fits-all management strategies, strengthen regional legal supervision, adjust fiscal incentives, and promote eco-friendly agriculture. In the north regions, the expansion of cropland in NPAs should be strictly controlled. For the southwest, the positive role of preserving cropland in NPAs for alleviating human-nature conflict and maintaining social stability should be emphasized. This study provides research support for China's exploration of geographically suitable strategies for controlling cropland in NPAs. Moreover, the findings could serve as a reference for the governance of NPAs in other countries.

4.
BMC Complement Med Ther ; 23(1): 436, 2023 Dec 04.
Artículo en Inglés | MEDLINE | ID: mdl-38049779

RESUMEN

BACKGROUND: Despite the critical progress of non-small cell lung cancer (NSCLC) therapeutic approaches, the clinical outcomes remain considerably poor. The requirement of developing novel therapeutic interventions is still urgent. In this study, we showed for the first time that diosbulbin C, a natural diterpene lactone component extracted from traditional Chinese medicine Dioscorea bulbifera L., possesses high anticancer activity in NSCLC. METHODS: A549 and NCI-H1299 cells were used. The inhibitory effects of the diosbulbin C on NSCLC cell proliferation were evaluated using cytotoxicity, clone formation, EdU assay, and flow cytometry. Network pharmacology methods were used to explore the targets through which the diosbulbin C inhibited NSCLC cell proliferation. Molecular docking, qRT-PCR, and western blotting were used to validate the molecular targets and regulated molecules of diosbulbin C in NSCLC. RESULTS: Diosbulbin C treatment in NSCLC cells results in a remarkable reduction in cell proliferation and induces significant G0/G1 phase cell cycle arrest. AKT1, DHFR, and TYMS were identified as the potential targets of diosbulbin C. Diosbulbin C may inhibit NSCLC cell proliferation by downregulating the expression/activation of AKT, DHFR, and TYMS. In addition, diosbulbin C was predicted to exhibit high drug-likeness properties with good water solubility and intestinal absorption, highlighting its potential value in the discovery and development of anti-lung cancer drugs. CONCLUSIONS: Diosbulbin C induces cell cycle arrest and inhibits the proliferation of NSCLC cells, possibly by downregulating the expression/activation of AKT, DHFR, and TYMS.


Asunto(s)
Carcinoma de Pulmón de Células no Pequeñas , Dioscorea , Neoplasias Pulmonares , Neoplasias Pulmonares/tratamiento farmacológico , Neoplasias Pulmonares/metabolismo , Carcinoma de Pulmón de Células no Pequeñas/tratamiento farmacológico , Carcinoma de Pulmón de Células no Pequeñas/metabolismo , Proteínas Proto-Oncogénicas c-akt/metabolismo , Simulación del Acoplamiento Molecular , Apoptosis , Línea Celular Tumoral , Puntos de Control del Ciclo Celular , Proliferación Celular , Fase G1
5.
Front Pharmacol ; 13: 919819, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36046825

RESUMEN

Macropinocytosis, a unique endocytosis pathway characterized by nonspecific internalization, has a vital role in the uptake of extracellular substances and antigen presentation. It is known to have dual effects on cancer cells, depending on cancer type and certain microenvironmental conditions. It helps cancer cells survive in nutrient-deficient environments, enhances resistance to anticancer drugs, and promotes invasion and metastasis. Conversely, overexpression of the RAS gene alongside drug treatment can lead to methuosis, a novel mode of cell death. The survival and proliferation of cancer cells is closely related to macropinocytosis in the tumor microenvironment (TME), but identifying how these cells interface with the TME is crucial for creating drugs that can limit cancer progression and metastasis. Substantial progress has been made in recent years on designing anticancer therapies that utilize the effects of macropinocytosis. Both the induction and inhibition of macropinocytosis are useful strategies for combating cancer cells. This article systematically reviews the general mechanisms of macropinocytosis, its specific functions in tumor cells, its occurrence in nontumor cells in the TME, and its application in tumor therapies. The aim is to elucidate the role and therapeutic potential of macropinocytosis in cancer treatment.

6.
Front Mol Biosci ; 9: 862932, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35372513

RESUMEN

Erianin is a major bisbenzyl compound extracted from Dendrobium chrysotoxum Lindl., an important traditional Chinese herb. In recent years, a growing body of evidence has proved the potential therapeutic effects of erianin on various cancers, including hepatoma, melanoma, non-small-cell lung carcinoma, myelogenous leukemia, breast cancer, and osteosarcoma. Especially, the pharmacological activities of erianin, such as antioxidant and anticancer activity, have been frequently demonstrated by plenty of studies. In this study, we firstly conducted a systematic review on reported anticancer activity of erianin. All updated valuable information regarding the underlying action mechanisms of erianin in specific cancer was recorded and summarized in this paper. Most importantly, based on the molecular structure of erianin, its potential molecular targets were analyzed and predicted by means of the SwissTargetPrediction online server (http://www.swisstargetprediction.ch). In the meantime, the potential therapeutic targets of 10 types of cancers in which erianin has been proved to have anticancer effects were also predicted via the Online Mendelian Inheritance in Man (OMIM) database (http://www.ncbi.nlm.nih.gov/omim). The overlapping targets may serve as valuable target candidates through which erianin exerts its anticancer activity. The clinical value of those targets was subsequently evaluated by analyzing their prognostic role in specific cancer using Kaplan-Meier plotter (http://Kmplot.com/analysis/) and Gene Expression Profiling Interactive Analysis (GEPIA) (http://gepia.cancer-pku.cn/). To better assess and verify the binding ability of erianin with its potential targets, molecular flexible docking was performed using Discovery Studio (DS). The valuable targets obtained from the above analysis and verification were further mapped to the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway using the Database for Annotation, Visualization and Integrated Discovery (DAVID) (http://david.abcc.ncifcrf.gov/) to explore the possible signaling pathways disturbed/regulated by erianin. Furthermore, the in silico prediction of absorption, distribution, metabolism, excretion, and toxicity (ADMET) properties of erianin was also performed and provided in this paper. Overall, in this study, we aimed at 1) collecting all experiment-based important information regarding the anticancer effect and pharmacological mechanism of erianin, 2) providing the predicted therapeutic targets and signaling pathways that erianin might act on in cancers, and 3) especially providing in silico ADMET properties of erianin.

7.
Sci Total Environ ; 806(Pt 2): 150322, 2022 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-34607098

RESUMEN

Accurate information on farmland soil heavy metal elements is needed for pollution management and strategic decision making at the national level. In this paper, we review the Chinese literature on soil heavy metal elements (i.e., arsenic, cadmium, chromium, copper, lead, mercury, and zinc) over the past 20 years using meta-analysis. The overall pollution status, spatiotemporal distribution patterns and driving factors of heavy metals in China's farmland soil are explored by using the geoaccumulation index, the standard deviation ellipse method and the PCA/APCS model, respectively. The results show that most heavy metals in farmland soil from the study cases are similar to the world average. Seven types of elements have increased compared with background values. Cd and Hg have become the top polluting elements in China and industrial and agricultural activities are the main sources of current heavy metal element enrichment. Regional natural-social-economic differences have led to significant spatial heterogeneity of heavy metal pollution, showing an intensity pattern unfavourable to national food security. In the time period, the overall distribution range gradually increased with the accelerated growth of regional industrial output, and there was a tendency for the gravity centre of the pollution studies to migrate inland to the northwest and southwest. Regionally differentiated environmental regulation and pollution remediation measures should be developed for pollution prevention and control in the future.


Asunto(s)
Metales Pesados , Contaminantes del Suelo , China , Monitoreo del Ambiente , Granjas , Metales Pesados/análisis , Medición de Riesgo , Suelo , Contaminantes del Suelo/análisis
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