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Mol Biosyst ; 6(6): 967-75, 2010 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-20485741

RESUMEN

A series of 4,7-pi-extended 2,1,3-benzothiadiazoles (BTDs) with different molecular architectures, in particular, the organic dyes based on the 4-(arylethynyl)-7-(4-methoxy)-2,1,3-benzothiazole skeleton, can be used at very low concentrations (down to 10 microM) to detect DNA at 1 ppm in phosphate buffer solutions. Upon binding to DNA, these dyes showed an exponential increase in the fluorescence intensity (hyperchromic effect) and a red shift (1-5 nm) in the long-wavelength emission maxima. Pre-steady state kinetic experiments (stopped-flow) demonstrated the fast dye interaction with the biomacromolecules of DNA with an increase in fluorescence, especially with non-symmetrical BTDs containing an ethynyl spacer. An intercalation model could be proposed based on the photophysical properties, X-ray analysis, and theoretical calculations (ab initio). In this model, the intercalation occurs on the ethynyl side of the BTD, and as a consequence, the PhOMe portion is free to perform the ICT process with the BTD core and stabilizes it in the excited state.


Asunto(s)
ADN/química , Colorantes Fluorescentes/química , Espectrometría de Fluorescencia/métodos , Tiadiazoles/química , Actinas/química , Actinas/genética , Sitios de Unión , ADN/genética , Humanos , Cinética , Modelos Moleculares , Estructura Molecular , Conformación de Ácido Nucleico , Reacción en Cadena de la Polimerasa , Reproducibilidad de los Resultados
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