A pilot observation using ultrasonography and vowel articulation to investigate the influence of suspected obstructive sleep apnea on upper airway.

Failure to employ suitable measures before administering full anesthesia to patients with obstructive sleep apnea (OSA) who are undergoing surgery may lead to developing complications after surgery. Therefore, it is very important to screen OSA before performing a surgery, which is currently done by subjective questionnaires such as STOP-Bang, Berlin scores. These questionnaires have 10-36% specificity in detecting sleep apnea, along with no information given on anatomy of upper airway, which is important for intubation. To address these challenges, we performed a pilot study to understand the utility of ultrasonography and vowel articulation in screening OSA. Our objective was to investigate the influence of OSA risk factors in vowel articulation through ultrasonography and acoustic features analysis. To accomplish this, we recruited 18 individuals with no risk of OSA and 13 individuals with high risk of OSA and asked them to utter vowels, such as /a/ (as in "Sah"), /e/ (as in "See"). An expert ultra-sonographer measured the parasagittal anterior-posterior (PAP) and transverse diameter of the upper airway. From the recorded vowel sounds, we extracted 106 features, including power, pitch, formant, and Mel frequency cepstral coefficients (MFCC). We analyzed the variation of the PAP diameters and vowel features from "See: /i/" to "Sah /a/" between control and OSA groups by two-way repeated measures ANOVA. We found that, there was a variation of upper airway diameter from "See" to "Sah" was significantly smaller in OSA group than control group (OSA: ∆12.8 ± 5.3 mm vs. control: ∆22.5 ± 3.9 mm OSA, p < 0.01). Moreover, we found several vowel features showed the exact same or opposite trend as PAP diameter variation, which led us to build a machine learning model to estimate PAP diameter from vowel features. We found a correlation coefficient of 0.75 between the estimated and measured PAP diameter after applying four estimation models and combining their output with a random forest model, which showed the feasibility of using acoustic features of vowel sounds to monitor upper airway diameter. Overall, this study has proven the concept that ultrasonography and vowel sounds analysis may be useful as an easily accessible imaging tool of upper airway.

An Actionable Expert-System Algorithm to Support Nurse-Led Cancer Survivorship Care: Algorithm Development Study.

BACKGROUND: Comprehensive models of survivorship care are necessary to improve access to and coordination of care. New models of care provide the opportunity to address the complexity of physical and psychosocial problems and long-term health needs experienced by patients following cancer treatment. OBJECTIVE: This paper presents our expert-informed, rules-based survivorship algorithm to build a nurse-led model of survivorship care to support men living with prostate cancer (PCa). The algorithm is called No Evidence of Disease (Ned) and supports timelier decision-making, enhanced safety, and continuity of care. METHODS: An initial rule set was developed and refined through working groups with clinical experts across Canada (eg, nurse experts, physician experts, and scientists; n=20), and patient partners (n=3). Algorithm priorities were defined through a multidisciplinary consensus meeting with clinical nurse specialists, nurse scientists, nurse practitioners, urologic oncologists, urologists, and radiation oncologists (n=17). The system was refined and validated using the nominal group technique. RESULTS: Four levels of alert classification were established, initiated by responses on the Expanded Prostate Cancer Index Composite for Clinical Practice survey, and mediated by changes in minimal clinically important different alert thresholds, alert history, and clinical urgency with patient autonomy influencing clinical acuity. Patient autonomy was supported through tailored education as a first line of response, and alert escalation depending on a patient-initiated request for a nurse consultation. CONCLUSIONS: The Ned algorithm is positioned to facilitate PCa nurse-led care models with a high nurse-to-patient ratio. This novel expert-informed PCa survivorship care algorithm contains a defined escalation pathway for clinically urgent symptoms while honoring patient preference. Though further validation is required through a pragmatic trial, we anticipate the Ned algorithm will support timelier decision-making and enhance continuity of care through the automation of more frequent automated checkpoints, while empowering patients to self-manage their symptoms more effectively than standard care. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): RR2-10.1136/bmjopen-2020-045806.

Sleep apnea severity based on estimated tidal volume and snoring features from tracheal signals.

Sleep apnea can be characterized by reductions in the respiratory tidal volume. Previous studies showed that the tidal volume can be estimated from tracheal sounds and movements called tracheal signals. Additionally, tracheal sounds include the sounds of snoring, a common symptom of obstructive sleep apnea. This study investigates the feasibility of estimating the severity of sleep apnea, as quantified by the apnea/hypopnea index (AHI), using the estimated tidal volume and snoring sounds extracted from tracheal signals. Tracheal signals were recorded simultaneously with polysomnography (PSG). The tidal volume was estimated from tracheal signals. The reductions in the tidal volume were detected as potential respiratory events. Additionally, features related to snoring sounds, which quantified variability, temporal clusters, and dominant frequency of snores, were extracted. A step-wise regression model and a greedy search algorithm were used sequentially to select the optimal set of features to estimate the apnea/hypopnea index and classify participants into healthy individuals and patients with sleep apnea. Sixty-one participants with suspected sleep apnea (age: 51 ± 16, body mass index: 29.5 ± 6.4 kg/m2 , apnea/hypopnea index: 20.2 ± 21.2 event/h) who were referred for a sleep test were recruited. The estimated apnea/hypopnea index was strongly correlated with the polysomnography-based apnea/hypopnea index (R2  = 0.76, p < 0.001). The accuracy of detecting sleep apnea for the apnea/hypopnea index cutoff of 15 events/h was 78.69% and 83.61% with and without using snore-related features. These findings suggest that acoustic estimation of airflow and snore-related features can provide a convenient and reliable method for screening of sleep apnea.

Fibro-CoSANet: pulmonary fibrosis prognosis prediction using a convolutional self attention network.

Idiopathic pulmonary fibrosis (IPF) is a restrictive interstitial lung disease that causes lung function decline by lung tissue scarring. Although lung function decline is assessed by the forced vital capacity (FVC), determining the accurate progression of IPF remains a challenge. To address this challenge, we proposed Fibro-CoSANet, a novel end-to-end multi-modal learning based approach, to predict the FVC decline. Fibro-CoSANet utilized computed tomography images and demographic information in convolutional neural network frameworks with a stacked attention layer. Extensive experiments on the OSIC Pulmonary Fibrosis Progression Dataset demonstrated the superiority of our proposed Fibro-CoSANet by achieving new state-of-the-art modified Laplace log-likelihood score of -6.68. This network may benefit research areas concerned with designing networks to improve the prognostic accuracy of IPF. The source-code for Fibro-CoSANet is available at: https://github.com/zabir-nabil/Fibro-CoSANet.

COVID-19 identification from volumetric chest CT scans using a progressively resized 3D-CNN incorporating segmentation, augmentation, and class-rebalancing.

The novel COVID-19 is a global pandemic disease overgrowing worldwide. Computer-aided screening tools with greater sensitivity are imperative for disease diagnosis and prognosis as early as possible. It also can be a helpful tool in triage for testing and clinical supervision of COVID-19 patients. However, designing such an automated tool from non-invasive radiographic images is challenging as many manually annotated datasets are not publicly available yet, which is the essential core requirement of supervised learning schemes. This article proposes a 3D Convolutional Neural Network (CNN)-based classification approach considering both the inter-and intra-slice spatial voxel information. The proposed system is trained end-to-end on the 3D patches from the whole volumetric Computed Tomography (CT) images to enlarge the number of training samples, performing the ablation studies on patch size determination. We integrate progressive resizing, segmentation, augmentations, and class-rebalancing into our 3D network. The segmentation is a critical prerequisite step for COVID-19 diagnosis enabling the classifier to learn prominent lung features while excluding the outer lung regions of the CT scans. We evaluate all the extensive experiments on a publicly available dataset named MosMed, having binary- and multi-class chest CT image partitions. Our experimental results are very encouraging, yielding areas under the Receiver Operating Characteristics (ROC) curve of 0 . 914 ± 0 . 049 and 0 . 893 ± 0 . 035 for the binary- and multi-class tasks, respectively, applying 5-fold cross-validations. Our method's promising results delegate it as a favorable aiding tool for clinical practitioners and radiologists to assess COVID-19.

Impact of demographic, environmental, socioeconomic, and government intervention on the spreading of COVID-19.

BACKGROUND: The coronavirus disease 2019 (COVID-19) pandemic is a worldwide epidemiological emergency, and the risk factors for the multiple waves with new COVID-19 strains are concerning. This study aims to identify the most significant risk factors for spreading COVID-19 to help policymakers take early measures for the next waves. METHODS: We conducted the study on randomly selected 29 countries where the pandemic had a downward trend in the daily active cases curve as of June 10, 2020. We investigated the association with the standardized spreading index and demographical, environmental, socioeconomic, and government intervention. To standardize the spreading index, we accounted for the number of tests and the timeline bias. Furthermore, we performed multiple linear regression to identify the relative importance of the variables. RESULTS: In the correlation analysis, air pollution, PM2.5 (r = 0.37, p = 0.0466), number of days to impose lockdown from first case (r = 0.38, p = 0.0424) and total confirmed cases on the first lockdown (r = 0.61, p = 0.0004) were associated with outcome measures. In the adjusted model, air pollution ( ß 1  = 4.5, p = 0.0127, |t| = 3.1) and overweight prevalence ( ß 1  = 4.7, p = 0.0187, |t| = 2.9) were the most significant exposure variable for spreading of COVID-19. CONCLUSION: Our findings showed that countries with larger PM2.5 values and comparatively more overweight populations are at higher risk of spreading COVID-19. Proper preventive measures may reduce the spreading.

Relative tidal volume and respiratory airflow estimation using tracheal sound and movement during sleep.

Airflow is the reference signal to assess sleep respiratory disorders, such as sleep apnea. Previous studies estimated airflow using tracheal sounds in short segments with specific airflow rates, while requiring calibration or a few breaths for tuning the relationship between sound energy and airflow. Airflow-sound relationship can change by posture, sleep stage and airflow rate or tidal volume. We investigated the possibility of estimating surrogates of tidal volume without calibration in the adult sleep apnea population using tracheal sounds and movements. Two surrogates of tidal volume: thoracoabdominal range of sum movement and airflow level were estimated. Linear regression was used to estimate thoracoabdominal range of sum movement from sound energy and the range of movements. The sound energy lower envelope was found to correlate with airflow level. The agreement between reference and estimated signals was assessed by repeated-measure correlation analysis. The estimated tidal volumes were used to estimate the airflow signal. Sixty-one participants (30 females, age: 51 ± 16 years, body mass index: 29.5 ± 6.4 kg m-2 , and apnoea-hypopnea index: 20.2 ± 21.2) were included. Reference and estimated thoracoabdominal range of sum movement of whole night data were significantly correlated with the reference signal extracted from polysomnography (r = 0.5 ± 0.06). Similarly, significant correlations (r = 0.3 ± 0.05) were found for airflow level. Significant differences in estimated surrogates of tidal volume were found between normal breathing and apnea/hypopnea. Surrogate of airflow can be extracted from tracheal sounds and movements, which can be used for assessing the severity of sleep apnea and even phenotyping sleep apnea patients based on the estimated airflow shape.

Automatic Respiratory Phase Identification Using Tracheal Sounds and Movements During Sleep.

One of the most important signals to assess respiratory function, especially in patients with sleep apnea, is airflow. A convenient method to estimate airflow is based on analyzing tracheal sounds and movements. However, this method requires accurate identification of respiratory phases. Our goal is to develop an automatic algorithm to analyze tracheal sounds and movements to identify respiratory phases during sleep. Data from adults with suspected sleep apnea who were referred for in-laboratory sleep studies were included. Simultaneously with polysomnography, tracheal sounds and movements were recorded with a small wearable device attached to the suprasternal notch. First, an adaptive detection algorithm was developed to localize the respiratory phases in tracheal sounds. Then, for each phase, a set of morphological features from sound energy and tracheal movement were extracted to classify the localized phases into inspirations or expirations. The average error and time delay of detecting respiratory phases were 7.62% and 181 ms during normal breathing, 8.95% and 194 ms during snoring, and 13.19% and 220 ms during respiratory events, respectively. The average classification accuracy was 83.7% for inspirations and 75.0% for expirations. Respiratory phases were accurately identified from tracheal sounds and movements during sleep.

Sleep/Wakefulness Detection Using Tracheal Sounds and Movements.

PURPOSE: The current gold standard to detect sleep/wakefulness is based on electroencephalogram, which is inconvenient if included in portable sleep screening devices. Therefore, a challenge in the portable devices is sleeping time estimation. Without sleeping time, sleep parameters such as apnea/hypopnea index (AHI), an index for quantifying sleep apnea severity, can be underestimated. Recent studies have used tracheal sounds and movements for sleep screening and calculating AHI without considering sleeping time. In this study, we investigated the detection of sleep/wakefulness states and estimation of sleep parameters using tracheal sounds and movements. MATERIALS AND METHODS: Participants with suspected sleep apnea who were referred for sleep screening were included in this study. Simultaneously with polysomnography, tracheal sounds and movements were recorded with a small wearable device, called the Patch, attached over the trachea. Each 30-second epoch of tracheal data was scored as sleep or wakefulness using an automatic classification algorithm. The performance of the algorithm was compared to the sleep/wakefulness scored blindly based on the polysomnography. RESULTS: Eighty-eight subjects were included in this study. The accuracy of sleep/wakefulness detection was 82.3±8.66% with a sensitivity of 87.8±10.8 % (sleep), specificity of 71.4±18.5% (awake), F1 of 88.1±9.3% and Cohen's kappa of 0.54. The correlations between the estimated and polysomnography-based measures for total sleep time and sleep efficiency were 0.78 (p<0.001) and 0.70 (p<0.001), respectively. CONCLUSION: Sleep/wakefulness periods can be detected using tracheal sound and movements. The results of this study combined with our previous studies on screening sleep apnea with tracheal sounds provide strong evidence that respiratory sounds analysis can be used to develop robust, convenient and cost-effective portable devices for sleep apnea monitoring.

Removing of Snoring Segments from Tracheal Breathing Sounds using a Wavelet-based Algorithm.

Tracheal sounds represent information about the upper airway and respiratory airflow, however, they can be contaminated by the snoring sounds. The sound of snoring has spectral content in a wide range that overlaps with that of breathing sounds during sleep. For assessing respiratory airflow using tracheal breathing sound, it is essential to remove the effect of snoring. In this paper, an automatic and unsupervised wavelet-based snoring removal algorithm is presented. Simultaneously with full-night polysomnography, the tracheal sound signals of 9 subjects with different levels of airway obstruction were recorded by a microphone placed over the trachea during sleep. The segments of tracheal sounds that were contaminated by snoring were manually identified through listening to the recordings. The selected segments were automatically categorized based on including discrete or continuous snoring pattern. Segments with discrete snoring were analyzed by an iterative wave-based filtering optimized to separate large spectral components related to snoring from smaller ones corresponded to breathing. Those with continuous snoring were first segmented into shorter segments. Then, each short segments were similarly analyzed along with a segment of normal breathing extracted from the recordings during wakefulness. The algorithm was evaluated by visual inspection of the denoised sound energy and comparison of the spectral densities before and after removing snores, where the overall rate of detectability of snoring was less than 2%.Clinical Relevance- The algorithm provides a way of separating snoring pattern from the tracheal breathing sounds. Therefore, each of them can be analyzed separately to assess respiratory airflow and the pathophysiology of the upper airway during sleep.

Relationship between Vowel Sound Features and Pharyngeal Airway Cross-Sectional Area during Normal Breathing.

Assessment of the pharyngeal airway is becoming important for delivering personalized treatment and better management of sleep apnea. However, evaluation of the pharyngeal airway area is difficult in the current state of the art. It is essential to use simple and accessible technology to measure the pharyngeal airway area. As vowel sounds are generated by vocal cords vibration and characterized by the pharyngeal airway, vowel sounds have the potential to evaluate the pharyngeal airway area. The objective of this study was to investigate the relationship between acoustic features of vowel sounds and the pharyngeal airway cross-sectional area (PAXSA) between soft palate and glottis. Twenty subjects were included in this study whose PAXSA was measured by acoustic pharyngometry. Vowel sounds were recorded with a microphone while lying supine. Vowel sound average power was calculated in different frequency ranges of 100-3000 Hz, 100-500 Hz, 500-1000 Hz, 1000-1500 Hz, 1500-2000 Hz, 2000-2500 Hz and 2500-3000 Hz. Statistical analysis showed that the decreases in the PAXSA were strongly correlated with the higher average power of vowel sounds in all frequency ranges. These results showed that individuals with low PAXSA might articulate the vowel in higher intensity. Clinical Relevance - This study demonstrates that the pharyngeal airway cross-sectional area during normal breathing has a significant effect on vowel articulation. Thus, vowel sound features can be used to estimate the resting pharyngeal airway cross-sectional area.

Ultrasonographic Measurement of Pharyngeal-Airway Dimension and Its Relationship with Obesity and Sleep-Disordered Breathing.

Previous studies based on magnetic resonance imaging (MRI) or computed tomography (CT) have shown that pharyngeal airway diameter during wakefulness is different between healthy controls and patients with a high risk of sleep-disordered breathing (SDB). However, MRI and CT are expensive and not easily accessible. Conversely, ultrasonography is more accessible and is getting more attention as a point-of-care technology to assess physiologic systems, such as the pharynx. Thus, we aimed to evaluate the feasibility of ultrasonography in estimating the pharyngeal airway dimension. To evaluate the pharyngeal airway with ultrasonography, we measured the parasagittal anterior-posterior (PAP) diameter and transverse diameter. For PAP diameter measurements, the transducer probe was placed in a submandibular lateral oblique position, with its superior margin abutting the angle of the left mandible. For the transverse measurement, the ultrasound probe was positioned in a submandibular location, in a near-coronal plane, just above the hyoid bone so that the tongue could be seen in cross-section. The diameter measurements were performed manually by two technicians. The reliability of these measurements was assessed by the intra-class correlation coefficient (ICC). To validate our measurements, we compared the measured PAP diameter with the average pharyngeal airway cross-sectional area from vellum to glottis measured by acoustic pharyngometry. Furthermore, we compared the influence of obesity and SDB in the measured pharyngeal diameters. Eighteen controls and 13 individuals with a high risk of SDB participated in this study. Reliability analysis of the PAP measurements yielded an ICC of 0.97 (95% confidence interval: 0.94-0.98). Furthermore, measured PAP diameters were significantly correlated with the pharyngeal airway cross-sectional area (r = 0.76, p < 0.01). Moreover, obesity and SDB were associated with decreases in PAP diameter. Our study shows that ultrasonography measurement of the PAP diameter may provide a quantitative assessment of the pharyngeal airway and may be useful for screening of SDB.

Portable diagnosis of sleep apnea with the validation of individual event detection.

STUDY OBJECTIVE: To develop an algorithm for improving apnea hypopnea index (AHI) estimation which includes event by event validation and event duration estimation. The algorithm uses breathing sounds, respiratory related movements and blood oxygen saturation (SaO2). METHODS: Adults with suspected sleep apnea underwent overnight polysomnography (PSG) at Toronto Rehabilitations Institute. Simultaneously with PSG, breathing sounds and respiratory related movements were recorded over the suprasternal notch using the Patch. The Patch had a microphone and an accelerometer to record respiratory sounds and movement, respectively. First, we calculated the amount of drops in SaO2 from pulse oximeter. Subsequently, energy of breaths and accelerometer were extracted. Features were normalized, weighted, summed and passed through a threshold to estimate PatchAHI. PatchAHI was compared to the AHI obtained from PSG (PSGAHI). Furthermore, performance of event detection was evaluated using F1-score. Moreover, event duration difference between estimated and PSG-based events was compared. RESULTS: Data from 69 subjects were investigated. PatchAHI had high correlation with PSGAHI (r2 = 0.88). Considering a diagnostic AHI cut-off of ≥15, sensitivity and specificity were 91.42 ± 11.92% and 89.29 ± 7.62%, respectively. F1-score for individual event detection increased from 0.22 ± 0.10 for AHI≤5 to 0.72 ± 0.09 for AHI >30. Moreover, event duration difference between estimated events and PSG-based events was 5.33 ± 8.17 sec. CONCLUSION: Our proposed algorithm had high accuracy in estimating individual respiratory events during sleep. The algorithm can increase reliability of acoustic methods for diagnosis of sleep apnea at home.

Effects of Increased Pharyngeal Tissue Mass Due to Fluid Accumulation in the Neck on the Acoustic Features of Snoring Sounds in Men.

STUDY OBJECTIVES: Snoring sounds are generated by the vibration of pharyngeal tissue due to the upper airway narrowing. While recorded by a microphone placed over the neck, snoring can pass through the pharyngeal tissue surrounding the upper airway. Thus, changes in the pharyngeal tissue content may change the acoustic properties of the snoring sounds. Rostral fluid shift and the consequent increases in neck fluid volume (NFV) and neck circumference (NC) can increase pharyngeal tissue mass. Therefore, the goal of this study was to investigate the relationship between increases in pharyngeal tissue mass, as assessed by increased NFV and NC, and snoring sounds features. METHODS: We obtained data from a previous study where 20 males who were not obese participated in a daytime polysomnography and their NC and NFV were measured before and after sleep. During sleep, snoring sounds were recorded with a microphone placed over the neck. Spectral centroid of the snoring sounds was estimated. Then, the first five snoring segments were selected from the first and last 30 minutes of stage N2 sleep. RESULTS: We found a significant decrease in the snoring spectral centroid from the beginning to end of sleep. We also found that spectral centroid from the end of sleep in frequency ranges below 200 Hz was inversely correlated with the increases in NFV and NC from before to after sleep. CONCLUSIONS: These results suggest that snoring spectral centroid can be used as a noninvasive and convenient method to assess variations in the pharyngeal tissue mass.

A Subject-Specific Acoustic Model of the Upper Airway for Snoring Sounds Generation.

Monitoring variations in the upper airway narrowing during sleep is invasive and expensive. Since snoring sounds are generated by air turbulence and vibrations of the upper airway due to its narrowing; snoring sounds may be used as a non-invasive technique to assess upper airway narrowing. Our goal was to develop a subject-specific acoustic model of the upper airway to investigate the impacts of upper airway anatomy, e.g. length, wall thickness and cross-sectional area, on snoring sounds features. To have a subject-specific model for snoring generation, we used measurements of the upper airway length, cross-sectional area and wall thickness from every individual to develop the model. To validate the proposed model, in 20 male individuals, intensity and resonant frequencies of modeled snoring sounds were compared with those measured from recorded snoring sounds during sleep. Based on both modeled and measured results, we found the only factor that may positively and significantly contribute to snoring intensity was narrowing in the upper airway. Furthermore, measured resonant frequencies of snoring were inversely correlated with the upper airway length, which is a risk factor for upper airway collapsibility. These results encourage the use of snoring sounds analysis to assess the upper airway anatomy during sleep.

Snoring sound classification from respiratory signal.

Snoring is common in the general population and the irregularity could lead to the presence of Obstructive sleep apnea. Diagnosis of OSA could therefore be made by snoring sound analysis. However, there is still a shortage of robust methods to automatically detect snoring sounds without the need to calibrate for every individual. In this paper, a novel method based on neural network is proposed to classify breathing sound episodes from snoring and non-snoring sound segments. Our snore detection algorithm was applied to the tracheal sounds of nine individuals with different OSA severities. On the testing dataset, the classifier achieved a sensitivity and specificity of 95.9% and 97.6% respectively. Our results indicate that using such a method could help to detect snoring sounds with high accuracy which would be useful in the diagnosis of sleep apnea.

Effects of changing in the neck circumference during sleep on snoring sound characteristics.

Rostral fluid shift during sleep from the lower body part into the neck can increase neck circumference (NC) and narrow the upper airway. Such narrowing in the upper airway may increase turbulence of airflow passing through the upper airway; thus, induce snoring. The objective of this study was to investigate the effects of changes in NC during sleep on snoring sound characteristics. Fifteen non-obese men slept supine, and their sleep was monitored by a regular polysomnography. Snoring sounds were recorded with a microphone attached to the neck. NC was measured before and after sleep with a measuring tape. Snoring sounds' average power was calculated in different frequency ranges of 100 - 4000 Hz, 100 - 150 Hz, 150 - 450 Hz, 450 - 600 Hz, 600 - 1200 Hz, 1200 - 1800 Hz, 1800 - 2500 Hz and 2500 - 4000 Hz. Statistical analysis showed that increases in NC after sleep were strongly correlated with higher average power of the snoring sounds in the frequency ranges of 100-4000 Hz (r=0.74, P=0.004), 100-150 Hz (r=0.70, P=0.008), 150-450 Hz (r=0.73, P=0.005), and 450 - 600 Hz (r= 0.65, P=0.025). These results encourage the use of snoring sound analysis for monitoring the effects of fluid accumulation in the neck in relation to sleep apnea.