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1.
Int J Biol Macromol ; 101: 408-416, 2017 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-28344091

RESUMEN

The α-trypsin isoform is a globular protein that belongs to serine-protease family and has a polypeptide chain of 223 amino acid residues, six disulfide bridges and two domains with similar structures. The effects of aqueous-organic solvent (ethanol) in different concentration on the α-trypsin structure have been investigated by spectroscopic techniques and thermodynamic data analysis. The results from spectroscopic measurements, including far-UV Circular Dichroism, UV-vis absorption spectroscopy, intrinsic tryptophan fluorescence and dynamic light scattering (DLS) suggest the formation of partially folded states, instead of aggregate states, at high ethanol concentration (>60% v/v ethanol), with little loss of secondary structure, but with significant tertiary structure changes. The thermodynamic data (Tm and ΔH) suggest a loosening of intramolecular weak interactions, which reflects in a flexibility increase such that the catalytic capacity can be increased or decreased according to the ethanol concentration into the system. Overall results we suggest that in range of 0-60% v/v ethanol/buffer, α-trypsin undergoes reversible multimerization phenomena with catalytic activity. However from 60% v/v ethanol/buffer, population of folded partially states with less catalytic activity are predominant.


Asunto(s)
Etanol/farmacología , Tripsina/química , Tripsina/metabolismo , Agua/química , Animales , Biocatálisis , Bovinos , Relación Dosis-Respuesta a Droga , Estabilidad de Enzimas/efectos de los fármacos , Isoenzimas/química , Isoenzimas/metabolismo , Estructura Secundaria de Proteína , Termodinámica
2.
Int J Biol Macromol ; 70: 179-86, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-24997448

RESUMEN

A novel bovine trypsin isoform was purified from commercial sample by ion exchange chromatography by Sephadex SP C50®. New isoform contains in addition of loss of N-terminus hexapeptide (as found in parent molecule ß-trypsin) an intra-chain split between Lys-155 and Ser-156. The novel enzyme denominate γ-trypsin showed similar properties with α-trypsin isoform in polypeptide number chain (two chain), molecular masses (23,312 Da), secondary structure, hydrodynamic radius and others. In spite of enzymatic and structural similarities of both isoforms, γ-trypsin preferably has a lower rate formation from ß-trypsin, a lower surface charge, but the γ-trypsin has a higher thermal stability than α-trypsin. Due to obtaining facility of purification of bovine trypsin isoforms from commercial font, and properties described above, this enzyme becomes an interesting alternative for the food industry, detergent and biocatalysis research.


Asunto(s)
Tripsina/química , Animales , Bovinos , Activación Enzimática , Estabilidad de Enzimas , Isoenzimas , Modelos Moleculares , Peso Molecular , Péptidos/química , Desnaturalización Proteica , Dominios y Motivos de Interacción de Proteínas , Estructura Secundaria de Proteína , Termodinámica , Tripsina/aislamiento & purificación , Tripsina/metabolismo
3.
PLoS One ; 9(6): e99216, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24921246

RESUMEN

The search toward the establishment of novel serological tests for the diagnosis of leishmaniasis and proper differential diagnosis may represent one alternative to the invasive parasitological methods currently used to identify infected individuals. In the present work, we investigated the potential use of recombinant peroxidoxin (rPeroxidoxin) of Leishmania (Viannia) braziliensis as a potential antigen for the immunodiagnosis of human tegumentary (TL) and visceral leishmaniasis (VL) and canine visceral leishmaniasis (CVL). Linear B-cell epitope mapping was performed to identify polymorphic epitopes when comparing orthologous sequences present in Trypanosoma cruzi, the agent for Chagas disease (CD), and the Homo sapiens and Canis familiaris hosts. The serological assay (ELISA) demonstrated that TL, VL and CVL individuals showed high levels of antibodies against rPeroxidoxin, allowing identification of infected ones with considerable sensitivity and great ability to discriminate (specificity) between non-infected and CD individuals (98.46% and 100%; 98.18% and 95.71%; 95.79% and 100%, respectively). An rPeroxidoxin ELISA also showed a greater ability to discriminate between vaccinated and infected animals, which is an important requirement for the public campaign control of CVL. A depletion ELISA assay using soluble peptides of this B-cell epitope confirmed the recognition of these sites only by Leishmania-infected individuals. Moreover, this work identifies two antigenic polymorphic linear B-cell epitopes of L. braziliensis. Specific recognition of TL and VL patients was confirmed by significantly decreased IgG reactivity against rPeroxidoxin after depletion of peptide-1- and peptide-2-specific antibodies (peptide 1: reduced by 32%, 42% and 5% for CL, ML and VL, respectively; peptide-2: reduced by 24%, 22% and 13% for CL, ML and VL, respectively) and only peptide-2 for CVL (reduced 9%). Overall, rPeroxidoxin may be a potential antigen for the immunodiagnosis of TL, VL or CVL, as it has a higher agreement with parasitological assays and is better than other reference tests that use soluble Leishmania antigens for diagnosing CVL in Brazil (EIE-LVC, Bio-manguinhos, FIOCRUZ).


Asunto(s)
Mapeo Epitopo , Epítopos de Linfocito B/inmunología , Leishmania braziliensis/inmunología , Leishmaniasis Visceral/diagnóstico , Leishmaniasis Visceral/inmunología , Peroxirredoxinas/inmunología , Secuencia de Aminoácidos , Animales , Antígenos de Protozoos/inmunología , Reacciones Cruzadas/inmunología , Perros , Electroforesis en Gel de Poliacrilamida , Ensayo de Inmunoadsorción Enzimática , Femenino , Humanos , Inmunización , Inmunoglobulina G/inmunología , Leishmaniasis Visceral/sangre , Leishmaniasis Visceral/parasitología , Masculino , Datos de Secuencia Molecular , Péptidos/síntesis química , Péptidos/química , Peroxirredoxinas/química , Vacunas Antiprotozoos/inmunología , Curva ROC , Juego de Reactivos para Diagnóstico , Proteínas Recombinantes/aislamiento & purificación , Reproducibilidad de los Resultados , Solubilidad
4.
PLoS One ; 9(2): e89162, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24586563

RESUMEN

The volume and diversity of biological data are increasing at very high rates. Vast amounts of protein sequences and structures, protein and genetic interactions and phenotype studies have been produced. The majority of data generated by high-throughput devices is automatically annotated because manually annotating them is not possible. Thus, efficient and precise automatic annotation methods are required to ensure the quality and reliability of both the biological data and associated annotations. We proposed ENZYMatic Annotation Predictor (ENZYMAP), a technique to characterize and predict EC number changes based on annotations from UniProt/Swiss-Prot using a supervised learning approach. We evaluated ENZYMAP experimentally, using test data sets from both UniProt/Swiss-Prot and UniProt/TrEMBL, and showed that predicting EC changes using selected types of annotation is possible. Finally, we compared ENZYMAP and DETECT with respect to their predictions and checked both against the UniProt/Swiss-Prot annotations. ENZYMAP was shown to be more accurate than DETECT, coming closer to the actual changes in UniProt/Swiss-Prot. Our proposal is intended to be an automatic complementary method (that can be used together with other techniques like the ones based on protein sequence and structure) that helps to improve the quality and reliability of enzyme annotations over time, suggesting possible corrections, anticipating annotation changes and propagating the implicit knowledge for the whole dataset.


Asunto(s)
Bases de Datos de Proteínas , Enzimas , Anotación de Secuencia Molecular/métodos , Programas Informáticos , Animales , Biología Computacional/métodos , Enzimas/química , Enzimas/metabolismo , Predicción , Humanos , Modelos Moleculares , Estructura Terciaria de Proteína
5.
Mem Inst Oswaldo Cruz ; 108(6): 724-9, 2013 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-24037194

RESUMEN

Bacteriocins are antibacterial, proteinaceous substances that mediate microbial dynamics. Bacteriocin production is a highly disseminated property among all major lineages of bacteria, including Shigella. In this paper, we addressed the purification and characterisation of a bacteriocin produced by a Shigella sonnei strain (SS9) isolated from a child with acute diarrhoea. The substance was purified through ammonium-sulphate precipitation and sequential steps of chromatography. The intracellular fraction obtained at 75% ammonium sulphate maintained activity following exposure to pH values from 1-11 and storage at -80ºC for more than two years and was inactivated by high temperatures and proteases. The molecular mass of the purified bacteriocin was determined by mass spectrometry to be 18.56 kDa. The N-terminal sequence of the bacteriocin did not match any other antibacterial proteins described. A putative new bacteriocin produced by S. sonnei has been detected. This bacteriocin may represent a newly described protein or a previously described protein with a newly detected function. Considering that SS9 expresses antagonism against other diarrhoeagenic bacteria, the bacteriocin may contribute to S. sonnei virulence and is potentially applicable to either preventing or controlling diarrhoeal disease.


Asunto(s)
Bacteriocinas/aislamiento & purificación , Shigella sonnei/química , Enfermedad Aguda , Secuencia de Aminoácidos , Bacteriocinas/química , Bacteriocinas/metabolismo , Cromatografía de Fase Inversa , Diarrea/microbiología , Humanos , Espectrometría de Masas , Shigella sonnei/crecimiento & desarrollo
6.
Mem. Inst. Oswaldo Cruz ; 108(6): 724-729, set. 2013. tab, graf
Artículo en Inglés | LILACS | ID: lil-685496

RESUMEN

Bacteriocins are antibacterial, proteinaceous substances that mediate microbial dynamics. Bacteriocin production is a highly disseminated property among all major lineages of bacteria, including Shigella. In this paper, we addressed the purification and characterisation of a bacteriocin produced by a Shigella sonnei strain (SS9) isolated from a child with acute diarrhoea. The substance was purified through ammonium-sulphate precipitation and sequential steps of chromatography. The intracellular fraction obtained at 75% ammonium sulphate maintained activity following exposure to pH values from 1-11 and storage at -80ºC for more than two years and was inactivated by high temperatures and proteases. The molecular mass of the purified bacteriocin was determined by mass spectrometry to be 18.56 kDa. The N-terminal sequence of the bacteriocin did not match any other antibacterial proteins described. A putative new bacteriocin produced by S. sonnei has been detected. This bacteriocin may represent a newly described protein or a previously described protein with a newly detected function. Considering that SS9 expresses antagonism against other diarrhoeagenic bacteria, the bacteriocin may contribute to S. sonnei virulence and is potentially applicable to either preventing or controlling diarrhoeal disease.


Asunto(s)
Humanos , Bacteriocinas/aislamiento & purificación , Shigella sonnei/química , Enfermedad Aguda , Secuencia de Aminoácidos , Bacteriocinas/química , Bacteriocinas/metabolismo , Cromatografía de Fase Inversa , Diarrea/microbiología , Espectrometría de Masas , Shigella sonnei/crecimiento & desarrollo
7.
Parasitol Res ; 112(9): 3305-14, 2013 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-23812644

RESUMEN

We have previously shown that various species of Leishmania produce a lytic activity, which, in Leishmania amazonensis, is mediated by a pore-forming cytolysin, called leishporin. It is toxic for macrophages in vitro and optimally active at pH 5.0 to 5.5 and at 37 °C, suggesting that it might be active inside phagolysosomes. Leishporin from both L. amazonensis (a-leishporin) and Leishmania guyanensis (g-leishporin) can be activated by proteases, suggesting either a limited proteolysis of an inactive precursor or a proteolytic degradation of a non-covalently linked inhibitor. Here, we show that both a- and g-leishporin are also activated in dissociating conditions, indicating the second hypothesis as the correct one. In fact, we further demonstrated that inactive leishporin is non-covalently associated with an inhibitor, possibly more than one oligopeptide that, when removed, renders leishporin hemolytically active. This activation was shown to be the result of both the improvement of leishporin's ability to bind to phospholipids and the emergence of its pore-forming ability. In vitro results demonstrate that leishporin can be released by the parasites, as they evolve in axenic cultures, in an inactive form that can be activated. These results are compatible with our hypothesis that leishporin can be activated in the protease-rich, low pH, and dissociating environment of parasitophorous vacuoles, leading to disruption of both vacuoles and plasma membranes with the release of amastigotes.


Asunto(s)
Eritrocitos/parasitología , Leishmania/metabolismo , Leishmaniasis/parasitología , Lípidos de la Membrana/metabolismo , Proteínas Protozoarias/metabolismo , Animales , Membrana Celular/metabolismo , Citotoxinas/metabolismo , Activación Enzimática , Eritrocitos/fisiología , Hemólisis , Humanos , Concentración de Iones de Hidrógeno , Péptido Hidrolasas/metabolismo , Unión Proteica , Temperatura
8.
Acta sci., Biol. sci ; 34(3): 263-270, July-Sept. 2012. ilus, tab, graf
Artículo en Inglés | LILACS, VETINDEX | ID: biblio-859911

RESUMEN

Disruption of protein digestion in insects by specific endoprotease inhibitors is being regarded as an alternative to conventional insecticides for pest control. To optimize the effectiveness of this strategy, the understanding of the endoprotease diversity of the target insect is crucial. In this sense, a membrane-bound trypsin-like enzyme from the gut of Anticarsia gemmatalis fifth-instar larvae was purified. Non-soluble fraction of the gut extract was solubilized with 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate (CHAPS) and subjected to a p-aminobenzamidine affinity chromatography followed by anion-exchange chromatography. The yield of the purified enzyme was 11% with a purification factor of 143 and a final specific activity of 18.6 µM min.-1 mg-1 protein using N-α-benzoyl-L- Arg-p-nitroanilide (L-BApNA) as substrate. The purified sample showed a single band with proteolytic activity active and apparent molecular mass of 25 kDa on SDS-PAGE. Molecular mass determined by MALDI-TOF mass spectrometry was 28,632 ± 26 Da. Although the low recovery and the difficulties in purifying large enzyme amounts limited its further characterization, the results contribute for the understanding of the proteases present on A. gemmatalis gut, which are potential targets for natural or specifically designed protease inhibitors.


Comprometer a digestão de proteínas dos insetos pelo uso de inibidores específicos de endoproteases tem sido amplamente estudado como um método de controle de pragas alternativo ao uso dos inseticidas convencionais. No processo de otimização desta estratégia, o conhecimento da diversidade das endoproteases do inseto alvo torna-se crucial. Neste sentido, uma enzima "tipo-tripsina" ligada à membrana obtida do intestino de larvas do 5° instar de A. gemmatalis foi purificada. A fração insolúvel do extrato do intestino foi solubilizada com 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate (CHAPS) e submetida à uma cromatografia de afinidade em uma coluna de p-aminobenzamidina, seguida por uma cromatografia de troca-aniônica. O rendimento da enzima purificada foi de 11% com fator de purificação de 143 e uma atividade específica final de 18.6 µM min.-1 mg-1 de proteína usando N-α-benzoyl-L- Arg-p-nitroanilide (L-BApNA) como substrato. Após a separação da amostra purificada por SDS-PAGE e incubação subsequente com caseína, uma única banda ativa com massa molecular aparente de 25 kDa foi observada. A massa molecular determinada por espectrometria de massa (MALDI-TOF) foi de 28,632 ± 26 Da. O baixo rendimento e as dificuldades em purificar grandes quantidades da enzima limitaram caracterização complementar. A observação desta enzima, no entanto, é mais uma etapa no processo de conhecer as endoproteases presentes no intestino de A. gemmatalis, alvos potenciais de inibidores de proteases naturais ou especificamente projetados.


Asunto(s)
Animales , Glycine max , Tripsina
9.
Int J Biol Macromol ; 46(5): 502-11, 2010 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-20356563

RESUMEN

Bovine trypsin is a model system for the serine protease class of enzymes, which is an important target for contemporary medicinal chemistry. Some structural and thermodynamic reports are available on its interaction with benzamidine-based compounds but no structural information is available so far on its binding modes to the active principles of the trypanocidal drugs Pentacarinate (pentamidine) and Berenil (diminazene). The crystallographic structures of bovine beta-trypsin in complex with the ligands were determined to a resolution of 1.57 A (diminazene) and 1.70 A (diminazene and pentamidine). The second benzamidine moieties in these inhibitors are bound to the enzyme in different hot spots and only few hydrogen bonds mediate these interactions. Thermodynamic parameters for the association of pentamidine with beta-trypsin reveal that this inhibitor has about 1.3-fold lower affinity than diminazene. Moreover its binding mode resembles other benzamidine-based compounds that assess the aryl binding pocket of the enzyme; however, with almost 2.5-fold higher affinity. This is the first structural evidence of the binding of Berenil and Pentacarinate active principles trypanocidal drugs to serine proteases.


Asunto(s)
Diminazeno/análogos & derivados , Modelos Moleculares , Pentamidina/química , Tripanocidas/química , Inhibidores de Tripsina/química , Tripsina/metabolismo , Animales , Calorimetría , Bovinos , Cristalografía por Rayos X , Diminazeno/química , Diminazeno/metabolismo , Pentamidina/metabolismo , Termodinámica , Tripanocidas/metabolismo , Tripsina/química , Inhibidores de Tripsina/metabolismo
10.
Braz. arch. biol. technol ; 52(5): 1129-1136, Sept.-Oct. 2009. ilus, tab
Artículo en Inglés | LILACS | ID: lil-536388

RESUMEN

The heat conduction microcalorimeter can be used to evaluate the metabolic rates of the sperm cell. Two ejaculates of four stallions were cooled to +5ºC and checked for sperm motility (bright field microscopy), viability (eosin 3 percent), functional membrane integrity (hyposmotic swelling test), and heat production (microcalorimetry). Glucose and sperm cell concentrations were determined in order to measure the heat outputs resulting from sperm metabolism. Sperm viability, membrane integrity and sperm motility did not differ among the different glucose concentrations tested. Nevertheless, the highest heat output detected by the microcalorimeter was obtained with 6 mM glucose and 10(8) spermatozoa/mL. Since conduction microcalorimetry offered additional information on equine sperm metabolism, it could be used as a method to study equine semen preservation.


O microcalorímetro de condução pode ser usado para avaliar as taxas metabólicas do espermatozóide eqüino. Dois ejaculados de quatro garanhões foram avaliados quanto à motilidade progressiva pela microscopia, viabilidade espermática (eosina 3 por cento), integridade funcional da membrana (teste hiposmótico) e produção de calor (microcalorimetria). Concentrações ótimas de glicose e de células espermáticas foram determinadas, para mensurar o calor liberado resultante do metabolismo espermático em relação à capacidade de detecção do calor pelo microcalorímetro. Não foi observada diferença da motilidade, viabilidade e integridade funcional de membrana espermática quando adicionada glicose nas três concentrações estudadas. No entanto a avaliação por microcalorimetria ressaltou um maior fluxo de calor a uma concentração de 6 mM de glicose e uma concentração espermática de 10(8) espermatozóides/mL. Portanto, a técnica de microcalorimetria oferece informações adicionais sobre o metabolismo tornando-se uma ferramenta importante no estudo do processo de preservação do sêmen eqüino.

11.
Reprod Biol ; 9(2): 151-60, 2009 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-19734953

RESUMEN

The aims of the study were: 1/ to isolate and identify equine seminal plasma proteinase inhibitors, 2/ to evaluate their inhibitory potential, and 3/ to test a correlation between protein concentration in seminal plasma supernatant (obtained after precipitation with 36% ammonium sulfate) and stallion sexual maturity. Seminal plasma proteins obtained from six stallions were chromatographed in a Superose 12 (FPLC system) column followed by C(18) HPLC reverse-phase. Inhibition of trypsin amidase activity was evaluated in the collected fractions. Active proteins with a molecular mass of 6.3-7.0 KDa were identified using mass spectrometry. The older stallions showed a reduction in total seminal plasma protein concentration, but had similar concentrations of proteinase inhibitors (0.28+/-0.10 mg/ml) in seminal plasma supernatant. Different proteinase inhibitor isoforms were found in semen of all stallions which suggests that the isoforms may be used as biomarkers of individual animals.


Asunto(s)
Caballos/metabolismo , Inhibidores de Proteasas/aislamiento & purificación , Semen/química , Envejecimiento , Animales , Cromatografía en Gel , Cromatografía Líquida de Alta Presión , Masculino , Espectrometría de Masas , Inhibidores de Proteasas/química , Proteínas de Plasma Seminal/análisis , Proteínas de Plasma Seminal/aislamiento & purificación , Inhibidores de Serina Proteinasa/aislamiento & purificación
12.
J Hazard Mater ; 161(2-3): 1413-20, 2009 Jan 30.
Artículo en Inglés | MEDLINE | ID: mdl-18541369

RESUMEN

The degradation of phenol (2-30 mM) by free cells and by alginate-immobilized cells of Aureobasidium pullulans FE13 isolated from stainless steel effluents was studied in batch cultures with saline solution not supplemented with nutrients or yeast extract. The rate at which the immobilized cells degrade phenol was similar to the rate at which the suspended cells could degrade phenol, for a concentration of up to 16 mM of phenol. The maximum phenol volumetric degradation rate for 16 mM phenol was found to be 18.35 mg l(-1)h(-1) in the assays with free cells and 20.45 mg l(-1)h(-1) in the assays with alginate-immobilized cells, 18 mM phenol and cellular concentration of 0.176 g/l. At concentrations higher than this, an inhibitory effect was observed, resulting in the lowering of the phenol degradation rates. The immobilization was detrimental to the catechol 1,2-dioxygenase activity. However, the immobilized cells remained viable for a longer period, increasing the efficiency of phenol degradation. The yeast showed catechol 1,2-dioxygenase activity only after growth in the phenol, which was induced at phenol concentrations as low as 0.05 mM and up to 25 mM at 45 h of incubation at 30 degrees C. Phenol concentrations higher than 6mM were inhibitory to the enzyme. Addition of glucose, lactate, succinate, and benzoate reduced the rate at which phenol is consumed by cells. Our results suggest that inoculants based on immobilized cells of A. pullulans FE13 has potential application in the biodegradation of phenol and possibly in the degradation of other related aromatic compounds.


Asunto(s)
Ascomicetos/metabolismo , Fenol/química , Adsorción , Biodegradación Ambiental , Carbono/química , Catecol 1,2-Dioxigenasa/química , Desinfectantes , Relación Dosis-Respuesta a Droga , Composición de Medicamentos , Sales (Química)/química , Acero Inoxidable , Temperatura , Factores de Tiempo
13.
Braz. arch. biol. technol ; 51(4): 511-521, June-Aug. 2008. graf, tab
Artículo en Inglés | LILACS | ID: lil-622658

RESUMEN

The purpose of this work was to improve the separation and yield of pure β- and α-trypsin isoforms by ion-exchange chromatography and to characterize some physical-chemical properties of these isoforms. Purification of trypsin isoforms was performed by ion-exchange chromatography in 0.1 mol/L tris-HC buffer, pH 7.10 at 4ºC. The sample loading, salt concentration, flow rate and pH of mobile phase were varied to determine their effects on the resolution of the separation. The resolution was optimized mainly between β- and α-trypsin. Pure isoforms were obtained by chromatographying 100 mg of commercial trypsin during seven days, yielding 51 mg of high purity β-trypsin and 13 mg of α-trypsin partially pure, with small amounts of contaminating of ψ-trypsin. Thus, time and resolution of purification were optimized yielding large amounts of pure active enzymes that are useful for several research areas and biotechnology.


O propósito deste trabalho foi melhorar a separação e o rendimento das isoformas puras β- e α-tripsina por meio de cromatografia de troca iônica e caracterizar algumas propriedades físico-químicas dessas isoformas. A purificação de isoformas de tripsina foi realizada em SE Sephadex, com tampão tris-HCl, pH 7,10 a 4ºC. A quantidade de amostra, a concentração salina, o fluxo e o pH da fase móvel foram variados para determinar o efeito sobre a resolução da separação. A resolução foi otimizada principalmente entre β- e α-tripsina, utilizando o pH 7,10 a 4ºC. Isoformas puras foram obtidas a partir de 100 mg de tripsina comercial bovina depois de sete dias de cromatografia, fornecendo 51,0 mg de β-tripsina totalmente pura e 13,0 mg de α-tripsina parcialmente pura, com quantidades pequenas de contaminação por ψ-Tripsina. Assim, tempo e resolução da purificação foram otimizados redendo grandes quantidades de enzimas puras e ativas que são úteis em várias áreas de pesquisa e ciências biotecnológicas.

14.
J Ind Microbiol Biotechnol ; 35(2): 103-10, 2008 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-17990016

RESUMEN

Aggregatibacter (Actinobacillus) actinomycetemcomitans P(7-20) strain isolated from a periodontally diseased patient has produced a bacteriocin (named as actinomycetemcomitin) that is active against Peptostreptococcus anaerobius ATCC 27337. Actinomycetemcomitin was produced during exponential and stationary growth phases, and its amount decreased until it disappeared during the decline growth phase. It was purified by ammonium sulphate precipitation (30-60% saturation), and further by FPLC (mono-Q ionic exchange and Phenyl Superose hydrophobic interaction) and HPLC (C-18 reversed-phase). This bacteriocin loses its activity after incubation at a pH below 7.0 or above 8.0, following heating for 30 min at 45 degrees C, and after treatment with proteolytic enzymes such as trypsin, alpha-chymotrypsin, and papain. Actinomycetemcomitin has a molecular mass of 20.3 KDa and it represents a new bacteriocin from A. actinomycetemcomitans.


Asunto(s)
Aggregatibacter actinomycetemcomitans/metabolismo , Antibacterianos/biosíntesis , Bacteriocinas/biosíntesis , Aggregatibacter actinomycetemcomitans/aislamiento & purificación , Secuencia de Aminoácidos , Sulfato de Amonio , Antibacterianos/farmacología , Bacteriocinas/química , Bacteriocinas/aislamiento & purificación , Bacteriocinas/farmacología , Cromatografía Líquida de Alta Presión , Cromatografía Liquida , Precipitación Fraccionada , Humanos , Concentración de Iones de Hidrógeno , Datos de Secuencia Molecular , Peso Molecular , Péptido Hidrolasas/metabolismo , Peptostreptococcus/efectos de los fármacos , Periodontitis/microbiología , Alineación de Secuencia , Temperatura
15.
Braz. arch. biol. technol ; 49(4): 605-609, July 2006. graf
Artículo en Inglés | LILACS | ID: lil-448927

RESUMEN

In this work, polyclonal antibodies anti-human Factor IX were produced in New Zealand rabbits by immunization with commercial pure human FIX (hFIX) (Octanyne®, Octapharma, USA). The serum containing immunoglobulins anti-hFIX was useful to detect hFIX antigen in human plasma fractions submitted to anionic exchange chromatographic process and with a large yield. Immunoassays (ELISA) using bovine serum albumin, trypsin and peptides generated by cleavage assays with trypsin as digestion enzyme was performed and revealed adequate specificity of the polyclonal antibodies produced.


Neste trabalho foram produzidos anticorpos policlonais anti-fator IX humano em coelhos New Zealand imunizados com FIX humano (hFIX) comercial puro (Octanyne®, Octapharma, EUA). O soro contendo as imunoglobulinas anti-hFIX foi útil para a detecção do antígeno hFIX em frações do plasma humano submetido a cromatografia de troca iônica. Imunoensaios (ELISA) usando soro-albumina bovina, tripsina e peptídeos gerados por ensaios de clivagem com tripsina com enzima de digestão foram realizados e revelaram especificidade adequada dos anticorpos policlonais produzidos.

16.
J Mol Graph Model ; 25(4): 532-42, 2006 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-16750642

RESUMEN

Proinsulin C-peptide has been recently described as an endogenous peptide hormone, responsible for important physiological functions others than its role in proinsulin processing. Accumulating evidences that C-peptide exerts beneficial effects in the treatment of long term complications of patients with type 1 diabetes mellitus indicate that this molecule may be administered together with insulin in future therapies. Despite its clear pharmacological interest, the secondary and three-dimensional (3D) structures of human C-peptide are still points of controversy. In the present work we report molecular dynamics (MD) simulations of human, rat I and rat II C-peptides. A common experimental strategy applied to all peptides consisted of homology building followed by multinanosecond MD simulations in vacuum and water. Circular dichroism (CD) experiments of each peptide in the absence and presence of 2,2,2-trifluoroethanol (TFE) were performed to support validation of the theoretical models. A multiple sequence alignment of 23 known mammalian C-peptides was constructed to identify significant conserved sites that would be important for the maintenance of secondary and tertiary structures. The analysis of the molecular dynamics trajectories for the human, rat I and rat II molecules have shown quite different general behavior, being the human C-peptide more flexible than the two others. Human and rat C-peptides exhibit very stable turn-like structures at the middle and C-terminal regions, which have been described as potential active sites of C-peptides. Human C-peptide also presented a short alpha-helix throughout the MD, which was not found in the rat molecules. CD data is in very good agreement with the MD results and both methods were able to identify a greater structural stability and potential in rat C-peptides when compared to the human C-peptide. The simulation results are discussed and validated in the light of multiple sequence alignment, recent experimental data from the literature and our own CD experiments.


Asunto(s)
Péptido C/química , Secuencia de Aminoácidos , Animales , Dicroismo Circular , Humanos , Modelos Moleculares , Datos de Secuencia Molecular , Estructura Secundaria de Proteína , Ratas , Alineación de Secuencia , Termodinámica
17.
Biochim Biophys Acta ; 1717(1): 27-33, 2005 Nov 10.
Artículo en Inglés | MEDLINE | ID: mdl-16246298

RESUMEN

Crotoxin (Ctx) is a potent neurotoxin of the venom of Crotalus durissus terrificus (the South American rattlesnake). Ctx is a heterodimer composed of CB, a toxic PLA(2) subunit, and CA, a non-toxic and non-enzymatic subunit, that potentiates the neurotoxicity of CB in vivo. The deleterious action of Ctx upon C. d. terrificus snakes themselves is known to be prevented by a PLA(2) inhibitor (CNF) present in their blood serum. CNF acts by replacing CA in Ctx, thus forming a new stable complex CNF-CB. This complex no longer interacts with the target receptor (TR) to deliver CB to cause its lethal effect. Furthermore, CNF-CB seems to be reminiscent of the interaction Ctx-TR at the pre-synaptic site. In the present work, the binding competition between rat brain synaptosomes (TR) and CNF for Ctx was investigated. Radiolabeled Ctx, made of CA and one isoform of CB (CA-(125)ICB(2)), was used as ligand. The competition by unlabeled Ctx was taken as a reference. The potency of CNF as a competitor was evaluated under different incubation conditions with varying time scale addition of reagents (CA-(125)ICB(2), synaptosomes and CA-CB(2) or CNF). CNF was able to inhibit the binding of the toxin to synaptosomes as well as to partially displace the toxin already bound to its membrane target. The mechanisms of competition involved were discussed and a previous schematic model of interactions between Ctx, TR and CNF was updated.


Asunto(s)
Crotalus , Crotoxina/antagonistas & inhibidores , Glicoproteínas/metabolismo , Receptores de Superficie Celular/efectos de los fármacos , Proteínas de Reptiles/metabolismo , Sinaptosomas/metabolismo , Animales , Unión Competitiva/efectos de los fármacos , Proteínas Sanguíneas/química , Proteínas Sanguíneas/metabolismo , Proteínas Sanguíneas/farmacología , Encéfalo/citología , Venenos de Crotálidos/antagonistas & inhibidores , Venenos de Crotálidos/metabolismo , Crotoxina/química , Crotoxina/metabolismo , Glicoproteínas/química , Glicoproteínas/farmacología , Subunidades de Proteína/química , Subunidades de Proteína/metabolismo , Subunidades de Proteína/farmacología , Ratas , Receptores de Superficie Celular/metabolismo , Proteínas de Reptiles/química , Proteínas de Reptiles/farmacología , Sinaptosomas/química , Sinaptosomas/efectos de los fármacos
18.
J Enzyme Inhib Med Chem ; 19(4): 317-25, 2004 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-15558947

RESUMEN

Hydrolysis of D-valyl-L-leucyl-L-arginine p-nitroanilide by human tissue kallikrein (hK1) was studied in the absence and in the presence of increasing concentrations of the following chloride salts: sodium, potassium, calcium, magnesium and aluminium. The data indicate that the inhibition of hK1 by sodium, potassium, calcium and magnesium is linear competitive and that divalent cations are more potent inhibitors of hK1 than univalent cations. However the inhibition of hK1 by aluminium cation is linear mixed, with the cation being able to bind to both the free enzyme and the ES complex. This cation was the best hK1 inhibitor. Aluminium is not a physiological cation, but is a known neurotoxicant for animals and humans. The neurotoxic actions of aluminium may relate to neuro-degenerative diseases.


Asunto(s)
Amidohidrolasas/antagonistas & inhibidores , Cationes/farmacología , Inhibidores Enzimáticos/farmacología , Calicreínas de Tejido/antagonistas & inhibidores , Aluminio/farmacología , Amidohidrolasas/química , Amidohidrolasas/metabolismo , Unión Competitiva , Calcio/farmacología , Relación Dosis-Respuesta a Droga , Activación Enzimática/efectos de los fármacos , Humanos , Hidrólisis , Modelos Lineales , Magnesio/farmacología , Potasio/farmacología , Sodio/farmacología , Calicreínas de Tejido/química , Calicreínas de Tejido/metabolismo
19.
Nutrire Rev. Soc. Bras. Aliment. Nutr ; 24: 51-70, dez. 2002. tab, graf
Artículo en Portugués | LILACS | ID: lil-356353

RESUMEN

Seis hidrolisados de leite em pó desnatado foram preparados visando a produção de hidrolisados protéicos para uso em formulações dietéticas para fenilcetonúricos. Para isso utilizaram-se uma protease do Aspergillus oryzae (AO), isoladamente ou em associação com a papaína (PA), em diferentes tempos de reação e relação enzima:substrato (E:S). O interesse deste trabalho está associado ao estudo da distribuição dos peptídios nestas amostras, de acordo com o tamanho da cadeia, como critério de avaliação de sua qualidade nutricional. Inicialmente, os hidrolisados foram fracionados por cromatografia líquida de alta eficiência de exclusão molecular (SE-HPLC) e, para a quantificação dos componentes das frações cromatográficas, empregou-se o método rápido da Área Corrigida da Fração (ACF)...


Asunto(s)
Aspergillus oryzae , Leche Desnatada en Polvo , Papaína , Fenilcetonurias , Hidrolisados de Proteína , Aminoácidos , Cromatografía Liquida/métodos , Péptidos
20.
Mem. Inst. Oswaldo Cruz ; 95(5): 707-9, Sept.-Oct. 2000. tab
Artículo en Inglés | LILACS | ID: lil-267898

RESUMEN

The alpha-glycerophosphate dehydrogenase (alpha-GPDH) activity in flight muscles of Panstrongylus megistus and Triatoma sordida, vectors of Chagas disease in Brazil, was studied. Both species showed higher enzymatic activities in fliers than in non-fliers insects. T. sordida exhibited a higher proportion of flier insects than P. megistus. A possible role of alpha-GPDH on triatomines flight is discussed.


Asunto(s)
Animales , Vuelo Animal/fisiología , Glicerolfosfato Deshidrogenasa/metabolismo , Insectos Vectores/enzimología , Músculos/enzimología , Triatominae/enzimología , Glicerolfosfato Deshidrogenasa/fisiología , Panstrongylus/enzimología , Triatoma/enzimología
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