Exploring metapopulation-scale suppression alternatives for a global invader in a river network experiencing climate change.

Invasive species can dramatically alter ecosystems, but eradication is difficult, and suppression is expensive once they are established. Uncertainties in the potential for expansion and impacts by an invader can lead to delayed and inadequate suppression, allowing for establishment. Metapopulation viability models can aid in planning strategies to improve responses to invaders and lessen invasive species' impacts, which may be particularly important under climate change. We used a spatially explicit metapopulation viability model to explore suppression strategies for ecologically damaging invasive brown trout (Salmo trutta), established in the Colorado River and a tributary in Grand Canyon National Park. Our goals were to estimate the effectiveness of strategies targeting different life stages and subpopulations within a metapopulation; quantify the effectiveness of a rapid response to a new invasion relative to delaying action until establishment; and estimate whether future hydrology and temperature regimes related to climate change and reservoir management affect metapopulation viability and alter the optimal management response. Our models included scenarios targeting different life stages with spatially varying intensities of electrofishing, redd destruction, incentivized angler harvest, piscicides, and a weir. Quasi-extinction (QE) was obtainable only with metapopulation-wide suppression targeting multiple life stages. Brown trout population growth rates were most sensitive to changes in age 0 and large adult mortality. The duration of suppression needed to reach QE for a large established subpopulation was 12 years compared with 4 with a rapid response to a new invasion. Isolated subpopulations were vulnerable to suppression; however, connected tributary subpopulations enhanced metapopulation persistence by serving as climate refuges. Water shortages driving changes in reservoir storage and subsequent warming would cause brown trout declines, but metapopulation QE was achieved only through refocusing and increasing suppression. Our modeling approach improves understanding of invasive brown trout metapopulation dynamics, which could lead to more focused and effective invasive species suppression strategies and, ultimately, maintenance of populations of endemic fishes.

Las especies invasoras pueden alterar dramáticamente un ecosistema, pero erradicarlas es complicado y suprimirlas es costoso una vez que están establecidas. Las incertidumbres en el potencial de expansión y el impacto de un invasor pueden derivar en una supresión retardada e inadecuada que permite el establecimiento. Los modelos de viabilidad meta poblacional pueden auxiliar en la planeación de estrategias para mejorar las respuestas ante especies invasoras y disminuir su impacto, lo cual puede ser particularmente importante ante el cambio climático. Usamos un modelo meta poblacional espacialmente explícito para explorar las estrategias de supresión usadas con la trucha café (Salmo trutta), una especie invasora y dañina establecida en el Río Colorado en el Parque Nacional del Gran Cañón. Nuestros objetivos fueron estimar la efectividad de las estrategias enfocadas en diferentes etapas de vida y subpoblaciones dentro de una meta población; cuantificar la efectividad de una respuesta rápida ante una nueva invasión en relación a retardar la acción hasta que ocurra el establecimiento; y estimar si los sistemas térmicos e hidrológicos relacionados con el cambio climático y la gestión de cuencas afectarán la viabilidad meta poblacional y alterarán la respuesta óptima de gestión en el futuro. Nuestros modelos incluyeron escenarios enfocados en diferentes etapas de vida con intensidades espacialmente variables de pesca eléctrica, destrucción de redes, cultivo incentivado de pescadores, piscicidas y un dique. La cuasi extinción (CE) sólo se obtuvo con una supresión a nivel meta poblacional enfocada en múltiples etapas de vida. Las tasas de crecimiento poblacional de la trucha fueron más sensibles a los cambios en edad cero y una gran mortalidad adulta. La duración de la supresión requerida para llegar a la CE para una subpoblación grande establecida fue de doce años en comparación con los cuatro de una respuesta rápida a una nueva invasión. Las subpoblaciones aisladas fueron vulnerables a la supresión; sin embargo, las subpoblaciones conectadas por medio de tributarios incrementaron la persistencia meta poblacional al fungir como refugios climáticos. La escasez de agua, cambios impulsores en el almacenamiento de la cuenca y el calentamiento subsecuente causarían declinaciones de la trucha, pero la CE meta poblacional sólo se logró con el reenfoque e incremento de la supresión. Nuestra estrategia de modelado mejora el entendimiento de las dinámicas meta poblacionales de la trucha café invasora, lo cual podría llevar a estrategias de supresión más enfocadas y efectivas y, finalmente, al mantenimiento de las poblaciones de peces endémicos. Exploración de alternativas a la supresión a escala meta poblacional de un invasor mundial en una red de ríos que experimenta el cambio climático.

The covert world of fish biofluorescence: a phylogenetically widespread and phenotypically variable phenomenon.

The discovery of fluorescent proteins has revolutionized experimental biology. Whereas the majority of fluorescent proteins have been identified from cnidarians, recently several fluorescent proteins have been isolated across the animal tree of life. Here we show that biofluorescence is not only phylogenetically widespread, but is also phenotypically variable across both cartilaginous and bony fishes, highlighting its evolutionary history and the possibility for discovery of numerous novel fluorescent proteins. Fish biofluorescence is especially common and morphologically variable in cryptically patterned coral-reef lineages. We identified 16 orders, 50 families, 105 genera, and more than 180 species of biofluorescent fishes. We have also reconstructed our current understanding of the phylogenetic distribution of biofluorescence for ray-finned fishes. The presence of yellow long-pass intraocular filters in many biofluorescent fish lineages and the substantive color vision capabilities of coral-reef fishes suggest that they are capable of detecting fluoresced light. We present species-specific emission patterns among closely related species, indicating that biofluorescence potentially functions in intraspecific communication and evidence that fluorescence can be used for camouflage. This research provides insight into the distribution, evolution, and phenotypic variability of biofluorescence in marine lineages and examines the role this variation may play.

Does counting species count as taxonomy? On misrepresenting systematics, yet again.

Recent commentary by Costello and collaborators on the current state of the global taxonomic enterprise attempts to demonstrate that taxonomy is not in decline as feared by taxonomists, but rather is increasing by virtue of the rate at which new species are formally named. Having supported their views with data that clearly indicate as much, Costello et al. make recommendations to increase the rate of new species descriptions even more. However, their views appear to rely on the perception of species as static and numerically if not historically equivalent entities whose value lie in their roles as "metrics". As such, their one-dimensional portrayal of the discipline, as concerned solely with the creation of new species names, fails to take into account both the conceptual and epistemological foundations of systematics. We refute the end-user view that taxonomy is on the rise simply because more new species are being described compared with earlier decades, and that, by implication, taxonomic practice is a formality whose pace can be streamlined without considerable resources, intellectual or otherwise. Rather, we defend the opposite viewpoint that professional taxonomy is in decline relative to the immediacy of the extinction crisis, and that this decline threatens not just the empirical science of phylogenetic systematics, but also the foundations of comparative biology on which other fields rely. The allocation of space in top-ranked journals to propagate views such as those of Costello et al. lends superficial credence to the unsupportive mindset of many of those in charge of the institutional fate of taxonomy. We emphasize that taxonomy and the description of new species are dependent upon, and only make sense in light of, empirically based classifications that reflect evolutionary history; homology assessments are at the centre of these endeavours, such that the biological sciences cannot afford to have professional taxonomists sacrifice the comparative and historical depth of their hypotheses in order to accelerate new species descriptions.

Comparative ocular anatomy in a blind African cichlid fish, Lamprologus lethops.

OBJECTIVE: Troglomorphic fishes provide excellent comparative models for studying eye evolution. We describe the gross and microscopic anatomy of ocular structures of the depigmented, blind cichlid, Lamprologus lethops, and its putative sister species, Lamprologus tigripictilis collected from the lower Congo River in the Democratic Republic of Congo. PROCEDURES: Both species were fixed, paraffin-sectioned and stained. Immunohistochemical staining for rhodopsin markers was also performed. RESULTS: The globe in L. lethops is smaller than its sighted congener and recessed beneath bone and skin. The scleral profile maintains a wrinkled spherical shape, and the choroid is occupied by adipose tissue containing no rete mirabilis. The globe in L. lethops is foreshortened in the anterior-posterior dimension and deviated dorsally toward the midline with no extraocular muscles. At the posterior pole of the globe, there is an open periocular space containing no cell bodies. In L. tigripictilis, no choroidal adipose tissue is seen and a rete mirabilis is present. The retina of L. lethops is thinner compared with L. tigripictilis. Both species have scleral cartilage and fully developed lenses. Rhodopsin is present in the inner and outer segments of both species. CONCLUSIONS: Ocular adaptations evolve over time as a response to a life in darkness. Combining ocular anatomy, developmental data, and genetics will lead to insights about evolution in these fishes and contribute to understanding how ocular evolution works in other vertebrates.

Genetic isolation and morphological divergence mediated by high-energy rapids in two cichlid genera from the lower Congo rapids.

BACKGROUND: It is hypothesized that one of the mechanisms promoting diversification in cichlid fishes in the African Great Lakes has been the well-documented pattern of philopatry along shoreline habitats leading to high levels of genetic isolation among populations. However lake habitats are not the only centers of cichlid biodiversity - certain African rivers also contain large numbers of narrowly endemic species. Patterns of isolation and divergence in these systems have tended to be overlooked and are not well understood. RESULTS: We examined genetic and morphological divergence among populations of two narrowly endemic cichlid species, Teleogramma depressum and Lamprologus tigripictilis, from a 100 km stretch of the lower Congo River using both nDNA microsatellites and mtDNA markers along with coordinate-based morphological techniques. In L. tigripictilis, the strongest genetic break was concordant with measurable phenotypic divergence but no morphological disjunction was detected for T. depressum despite significant differentiation at mtDNA and nDNA microsatellite markers. CONCLUSIONS: The genetic markers revealed patterns of philopatry and estimates of genetic isolation that are among the highest reported for any African cichlid species over a comparable geographic scale. We hypothesize that the high levels of philopatry observed are generated and maintained by the extreme hydrology of the lower Congo River.