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1.
Biomed Res Int ; 2014: 853084, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24724104

RESUMEN

The first purification of the Mo-reducing enzyme from Serratia sp. strain DRY5 that is responsible for molybdenum reduction to molybdenum blue in the bacterium is reported. The monomeric enzyme has an apparent molecular weight of 105 kDalton. The isoelectric point of this enzyme was 7.55. The enzyme has an optimum pH of 6.0 and maximum activity between 25 and 35°C. The Mo-reducing enzyme was extremely sensitive to temperatures above 50°C (between 54 and 70°C). A plot of initial rates against substrate concentrations at 15 mM 12-MP registered a V max for NADH at 12.0 nmole Mo blue/min/mg protein. The apparent K m for NADH was 0.79 mM. At 5 mM NADH, the apparent V max and apparent K m values for 12-MP of 12.05 nmole/min/mg protein and 3.87 mM, respectively, were obtained. The catalytic efficiency (k cat/K m ) of the Mo-reducing enzyme was 5.47 M(-1) s(-1). The purification of this enzyme could probably help to solve the phenomenon of molybdenum reduction to molybdenum blue first reported in 1896 and would be useful for the understanding of the underlying mechanism in molybdenum bioremediation involving bioreduction.


Asunto(s)
Proteínas Bacterianas/metabolismo , Molibdeno/metabolismo , Oxidorreductasas/metabolismo , Serratia/enzimología , Catálisis , Oxidación-Reducción
2.
J Environ Biol ; 35(2): 353-5, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24665761

RESUMEN

Respiratory activity inhibition by toxic compounds in bacteria and yeast has been used to detect toxic compounds in the environment. Often the age of culture contributes towards the sensitivity of detection. In the present work, the effect of growth period on the sensitivity of an inhibitive assay for heavy metals using bacterial respiratory assay system based on the reduction of the water soluble tetrazolium dye MTT is reported. A silver-sensitive isolate was discovered to exhibit different sensitivities towards silver at different growth periods. An exponential decay model adequately described the inhibition due to silver. Analysis using ANOVA with post-hoc Tukey's test showed that the IC50 obtained by strain DRYS8 grown at the 12 hr- period in nutrient broth at 28 degrees C gave the lowest value compared to other growth periods. This study highlights the importance of taking into accounts growth conditions and age of culture in developing cellular-based bioassays.


Asunto(s)
Rhizobium/efectos de los fármacos , Plata/química , Plata/farmacología , Sales de Tetrazolio/metabolismo , Tiazoles/metabolismo , Bioensayo , Consumo de Oxígeno/efectos de los fármacos , Rhizobium/metabolismo , Sensibilidad y Especificidad , Sales de Tetrazolio/química , Tiazoles/química , Contaminantes Químicos del Agua/química , Contaminantes Químicos del Agua/farmacología
3.
J Environ Biol ; 35(2): 399-406, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24665769

RESUMEN

A diesel-degrading bacterium was isolated from a diesel-contaminated site in Selangor, Malaysia. The isolate was tentatively identified as Acinetobacter sp. strain DRY12 based on partial 16S rDNA molecular phylogeny and Biolog GN microplate panels and Microlog database. Optimum growth occurred from 3 to 5% diesel and the strain was able to tolerate as high as 8% diesel. The optimal pH that supported growth of the bacterium was between pH 7.5 to 8.0. The isolate exhibited optimal growth in between 30 and 35 degrees C. The best nitrogen source was potassium nitrate (between 0.6 and 0.9% (w/v)) followed by ammonium chloride, sodium nitrite and ammonium sulphate in descending order. An almost complete removal of diesel components was seen from the reduction in hydrocarbon peaks observed using Solid Phase Microextraction Gas Chromatography analysis after 10 days of incubation. The best growth kinetic model to fit experimental data was the Haldane model of substrate inhibiting growth with a correlation coefficient value of 0.97. The maximum growth rate- micromax was 0.039 hr(-1) while the saturation constant or half velocity constant Ks and inhibition constant Ki, were 0.387% and 4.46%, respectively. MATH assays showed that 75% of the bacterium was found in the hexadecane phase indicating that the bacterium was hydrophobic. The characteristics of this bacterium make it useful for bioremediation works in the Tropics.


Asunto(s)
Acinetobacter/metabolismo , Gasolina , Acinetobacter/clasificación , Acinetobacter/genética , Concentración de Iones de Hidrógeno , Filogenia , Suelo/química , Microbiología del Suelo , Contaminantes del Suelo/química , Contaminantes del Suelo/metabolismo , Temperatura , Factores de Tiempo
4.
Biomed Res Int ; 2013: 871941, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24381945

RESUMEN

A molybdenum-reducing bacterium from Antarctica has been isolated. The bacterium converts sodium molybdate or Mo6⁺ to molybdenum blue (Mo-blue). Electron donors such as glucose, sucrose, fructose, and lactose supported molybdate reduction. Ammonium sulphate was the best nitrogen source for molybdate reduction. Optimal conditions for molybdate reduction were between 30 and 50 mM molybdate, between 15 and 20°C, and initial pH between 6.5 and 7.5. The Mo-blue produced had a unique absorption spectrum with a peak maximum at 865 nm and a shoulder at 710 nm. Respiratory inhibitors such as antimycin A, sodium azide, potassium cyanide, and rotenone failed to inhibit the reducing activity. The Mo-reducing enzyme was partially purified using ion exchange and gel filtration chromatography. The partially purified enzyme showed optimal pH and temperature for activity at 6.0 and 20°C, respectively. Metal ions such as cadmium, chromium, copper, silver, lead, and mercury caused more than 95% inhibition of the molybdenum-reducing activity at 0.1 mM. The isolate was tentatively identified as Pseudomonas sp. strain DRY1 based on partial 16s rDNA molecular phylogenetic assessment and the Biolog microbial identification system. The characteristics of this strain would make it very useful in bioremediation works in the polar and temperate countries.


Asunto(s)
Molibdeno/metabolismo , Nitrógeno/metabolismo , Pseudomonas/aislamiento & purificación , Pseudomonas/metabolismo , Sulfato de Amonio/metabolismo , Regiones Antárticas , Cromatografía , Concentración de Iones de Hidrógeno , Iones , Molibdeno/química , Pseudomonas/genética , ARN Ribosómico 16S/genética , Temperatura
5.
Folia Microbiol (Praha) ; 55(2): 137-43, 2010 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-20490756

RESUMEN

A local molybdenum-reducing bacterium was isolated and tentatively identified as Acinetobacter calcoaceticus strain Dr.Y12 based on carbon utilization profiles using Biolog GN plates and 16S rDNA comparative analysis. Molybdate reduction was optimized under conditions of low dissolved oxygen (37 degrees C and pH 6.5). Of the electron donors tested, glucose, fructose, maltose and sucrose supported molybdate reduction after 1 d of incubation, glucose and fructose supporting the highest Mo-blue production. Optimum Mo-blue production was reached at 20 mmol/L molybdate and 5 mmol/L phosphate; increasing the phosphate concentrations inhibited the production. An increase in an overall absorption profiles, especially at peak maximum at 865 nm and the shoulder at 700 nm, was observed in direct correlation with the increased in Mo-blue amounts. Metal ions, such as chromium, cadmium, copper, mercury and lead (2 mmol/L final concentration) caused approximately 88, 53, 80, 100, and 20 % inhibition, respectively. Respiratory inhibitors, such as antimycin A, rotenone, sodium azide and cyanide showed in this bacterium no inhibition of the Mo-blue production, suggesting that the electron transport system is not a site of molybdate reduction.


Asunto(s)
Acinetobacter calcoaceticus/metabolismo , Molibdeno/metabolismo , Acinetobacter calcoaceticus/genética , Acinetobacter calcoaceticus/aislamiento & purificación , Datos de Secuencia Molecular , Oxidación-Reducción
6.
J Appl Microbiol ; 108(6): 2050-8, 2010 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-19968732

RESUMEN

AIMS: To isolate and characterize a potent molybdenum-reducing bacterium. METHODS AND RESULTS: A minimal salt medium supplemented with 10 mmol l(-1) molybdate, glucose (1.0%, w/v) as a carbon source and ammonium sulfate (0.3%, w/v) as a nitrogen source was used in the screening process. A molybdenum-reducing bacterium was isolated and tentatively identified as Pseudomonas sp. strain DRY2 based on carbon utilization profiles using Biolog GN plates and partial 16S rDNA molecular phylogeny. Strain DRY2 produced 2.4, 3.2 and 6.2 times more molybdenum blue compared to Serratia marcescens strain DRY6, Enterobacter cloacae strain 48 and Eschericia coli K12, respectively. Molybdate reduction was optimum at 5 mmol l(-1) phosphate. The optimum molybdate concentration that supported molybdate reduction at 5 mmol l(-1) phosphate was between 15 and 25 mmol l(-1). Molybdate reduction was optimum at 40 degrees C and at pH 6.0. Phosphate concentrations higher than 5 mmol l(-1) strongly inhibited molybdate reduction. Inhibitors of electron transport system such as antimycin A, rotenone, sodium azide and cyanide did not inhibit the molybdenum-reducing enzyme activity. Chromium, copper, mercury and lead inhibited the molybdenum-reducing activity. CONCLUSIONS: A novel molybdenum-reducing bacterium with high molybdenum reduction capacity has been isolated. SIGNIFICANCE AND IMPACT OF THE STUDY: Molybdenum is an emerging global pollutant that is very toxic to ruminants. The characteristics of this bacterium suggest that it would be useful in the bioremediation of molybdenum pollutant.


Asunto(s)
Molibdeno/metabolismo , Pseudomonas/metabolismo , Microbiología del Suelo , Contaminantes del Suelo/metabolismo , Biodegradación Ambiental , Carbono/metabolismo , Medios de Cultivo , ADN Bacteriano/genética , Nitrógeno/metabolismo , Oxidación-Reducción , Fosfatos/metabolismo , Filogenia , Pseudomonas/genética , Pseudomonas/aislamiento & purificación , ARN Ribosómico 16S/genética
7.
J Basic Microbiol ; 49 Suppl 1: S43-54, 2009 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-19455513

RESUMEN

Extensive use of metals in various industrial applications has caused substantial environmental pollution. Molybdenum-reducing bacteria isolated from soils can be used to remove molybdenum from contaminated environments. In this work we have isolated a local bacterium with the capability to reduce soluble molybdate to the insoluble molybdenum blue. We studied several factors that would optimize molybdate reduction. Electron donor sources such as glucose, sucrose, lactose, maltose and fructose (in decreasing efficiency) supported molybdate reduction after 24 h of incubation with optimum glucose concentration for molybdate reduction at 1.5% (w/v). The optimum pH, phosphate and molybdate concentrations, and temperature for molybdate reduction were pH 6.5, 5.0, 25 to 50 mM and 37 degrees C, respectively. The Mo-blue produced by cellular reduction exhibited a unique absorption spectrum with a maximum peak at 865 nm and a shoulder at 700 nm. Metal ions such as chromium, cadmium, copper, silver and mercury caused approximately 73, 71, 81, 77 and 78% inhibition of the molybdenum-reducing activity, respectively. All of the respiratory inhibitors tested namely rotenone, azide, cyanide and antimycin A did not show any inhibition to the molybdenum-reducing activity suggesting components of the electron transport system are not responsible for the reducing activity. The isolate was tentatively identified as Enterobacter sp. strain Dr.Y13 based on carbon utilization profiles using Biolog GN plates and partial 16S rDNA molecular phylogeny.


Asunto(s)
Enterobacter/metabolismo , Molibdeno/metabolismo , Microbiología del Suelo , Contaminantes del Suelo/metabolismo , Medios de Cultivo , ADN Bacteriano/genética , Enterobacter/genética , Enterobacter/aislamiento & purificación , Concentración de Iones de Hidrógeno , Oxidación-Reducción , Fosfatos/metabolismo , Filogenia , ARN Ribosómico 16S , Análisis de Secuencia de ADN , Temperatura
8.
J Environ Biol ; 30(1): 1-6, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112855

RESUMEN

A diesel-degrading bacterium from Antarctica has been isolated. The isolate was tentatively identified as Pseudomonas sp. strain DRYJ3 based on partial 16S rDNA molecular phylogeny and Biolog GN microplate panels and Microlog database. Growth on diesel was supported optimally by ammonium sulphate, nitrate and nitrite. The bacterium grew optimally in between 10 and 15 degrees C, pH 7.0 and 3.5% (v/v) diesel. The biodegradation of diesel oil by the strain increased in efficiency from the second to the sixth day of incubation from 1.4 to 18.8% before levelling off on the eighth day n-alkane oxidizing and aldehyde reductase activities were detected in the crude enzyme preparation suggesting the existence of terminal n-alkane oxidizing activity in this bacterium.


Asunto(s)
Gasolina , Pseudomonas/metabolismo , Regiones Antárticas , Proteínas Bacterianas/metabolismo , Biodegradación Ambiental , ADN Ribosómico/química , Concentración de Iones de Hidrógeno , Nitrógeno/metabolismo , Filogenia , Pseudomonas/genética , Pseudomonas/aislamiento & purificación , Temperatura
9.
J Environ Biol ; 30(1): 17-22, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112858

RESUMEN

A new inhibitive heavy metals determination method using trypsin has been developed. The enzyme was assayed using the casein-Coomassie-dye-binding method. In the absence of inhibitors, casein was hydrolysed to completion and the Coomassie-dye was unable to stain the protein and the solution became brown. In the presence of metals, the hydrolysis of casein was inhibited and the solution remained blue. The bioassay was able to detect zinc and mercury with IC50 (concentration causing 50% inhibition) values of 5.78 and 16.38 mg l(-1) respectively. The limits of detection (LOD), for zinc and mercury were 0.06 mg l(-1) (0.05-0.07, 95% confidence interval) and 1.06 mg l(-1) (1.017-1.102, 95% confidence interval), respectively. The limits of quantitation (LOQ) for zinc and mercury were 0.61 mg l(-1) (0.51-0.74 at a 95% confidence interval) and 1.35 mg l(-1) (1.29-1.40 at a 95% confidence interval), respectively. The IC50 value for zinc was much higher than the IC50 values for papain and Rainbow trout, but was within the range of Daphnia magna and Microtox. The IC50 value for zinc was only lower than those for immobilized urease. Other toxic heavy metals, such as lead, silver arsenic, copper and cadmium, did not inhibit the enzyme at 20 mg l(-1). Using this assay we managed to detect elevated zinc concentrations in several environmental samples. Pesticides, such as carbaryl, flucythrinate, metolachlor glyphosate, diuron, diazinon, endosulfan sulphate, atrazine, coumaphos, imidacloprid, dicamba and paraquat, showed no effect on the activity of trypsin relative to control (One-way ANOVA, F(12,26)= 0.3527, p> 0.05). Of the 17 xenobiotics tested, only (sodium dodecyl sulphate) SDS gave positive interference with 150% activity higher than that of the control at 0.25% (v/v).


Asunto(s)
Monitoreo del Ambiente/métodos , Tripsina/química , Zinc/análisis , Concentración 50 Inhibidora , Metales Pesados/química , Plaguicidas/química , Inhibidores de Tripsina/análisis , Inhibidores de Tripsina/química , Xenobióticos/química , Zinc/química
10.
J Environ Biol ; 30(1): 39-44, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112861

RESUMEN

In this work the development of an inhibitive assay for copper using the molybdenum-reducing enzyme assay is presented. The enzyme is assayed using 12-molybdophosphoric acid at pH 5.0 as an electron acceptor substrate and NADH as the electron donor substrate. The enzyme converts the yellowish solution into a deep blue solution. The assay is based on the ability of copper to inhibit the molybdenum-reducing enzyme from the molybdate-reducing Serratia sp. Strain DRY5. Other heavy metals tested did not inhibit the enzyme at 10 mg l(-1). The best model with high regression coefficient to measure copper inhibition is one-phase binding. The calculated IC50 (concentration causing 50% inhibition) is 0.099 mg l(-1) and the regression coefficient is 0.98. The comparative LC50, EC50 and IC50 data for copper in different toxicity tests show that the IC50 value for copper in this study is lower than those for immobilized urease, bromelain, Rainbow trout, R. meliloti, Baker's Yeast dehydrogenase activity Spirillum volutans, P. fluorescens, Aeromonas hydrophilia and synthetic activated sludge assays. However the IC50 value is higher than those for Ulva pertusa and papain assays, but within the reported range for Daphnia magna and Microtox assays.


Asunto(s)
Cobre/análisis , Monitoreo del Ambiente/métodos , Contaminantes Ambientales/análisis , Pruebas de Enzimas/métodos , Inhibidores Enzimáticos/análisis , Proteínas Bacterianas/antagonistas & inhibidores , Cobre/química , Inhibidores Enzimáticos/química , Molibdeno/química , Molibdeno/metabolismo
11.
J Environ Biol ; 30(1): 57-64, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112864

RESUMEN

Several local acrylamide-degrading bacteria have been isolated. One of the isolate that exhibited the highest growth on acrylamide as a nitrogen source was then further characterized. The isolate was tentatively identified as Bacillus cereus strain DRY135 based on carbon utilization profiles using Biolog GP plates and partial 16S rDNA molecular phylogeny. The isolate grew optimally in between the temperatures of 25 and 30 degrees C and within the pH range of 6.8 to 7.0. Glucose, fructose, lactose, maltose, mannitol, citric acid and sucrose supported growth with glucose being the best carbon source. Different concentrations of acrylamide ranging from 100 to 4000 mg l(-1) incorporated into the growth media shows that the highest growth was obtained at acrylamide concentrations of between 500 to 1500 mg l(-1). At 1000 mg l(-1) of acrylamide, degradation was 90% completed after ten days of incubation with concomitant cell growth. The metabolite acrylic acid was detected in the media during degradation. Other amides such as methacrylamide, nicotinamide, acetamide, propionamide and urea supported growth with the highest growth supported by acetamide, propionamide and urea. Strain DRY135, however was not able to assimilate 2-chloroacetamide. The characteristics of this isolate suggest that it would be useful in the bioremediation of acrylamide.


Asunto(s)
Acrilamida/metabolismo , Bacillus cereus/metabolismo , Contaminantes Ambientales/metabolismo , Acrilamida/química , Amidas/química , Amidas/metabolismo , Bacillus cereus/genética , Bacillus cereus/crecimiento & desarrollo , Bacillus cereus/aislamiento & purificación , Biodegradación Ambiental , Carbono/metabolismo , Técnicas de Cultivo de Célula , Concentración de Iones de Hidrógeno , Filogenia , Temperatura
12.
J Environ Biol ; 30(1): 65-72, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112865

RESUMEN

The need to isolate efficient heavy metal reducers for cost effective bioremediation strategy have resulted in the isolation of a potent molybdenum-reducing bacterium. The isolate was tentatively identified as Serratia sp. strain DRY5 based on the Biolog GN carbon utilization profiles and partial 16S rDNA molecular phylogeny. Strain DRY5 produced 2.3 times the amount of Mo-blue than S. marcescens strain Dr.Y6, 23 times more than E. coli K12 and 7 times more than E. cloacae strain 48. Strain DRY5 required 37 degrees C and pH 7.0 for optimum molybdenum reduction. Carbon sources such as sucrose, maltose, glucose and glycerol, supported cellular growth and molybdate reduction after 24 hr of static incubation. The most optimum carbon source that supported reduction was sucrose at 1.0% (w/v). Ammonium sulphate, ammonium chloride, glutamic acid, cysteine, and valine supported growth and molybdate reduction with ammonium sulphate as the optimum nitrogen source at 0. 2% (w/v). Molybdate reduction was optimally supported by 30 mM molybdate. The optimum concentration of phosphate for molybdate reduction was 5 mM when molybdate concentration was fixed at 30 mM and molybdate reduction was totally inhibited at 100 mM phosphate. Mo-blue produced by this strain shows a unique characteristic absorption profile with a maximum peak at 865 nm and a shoulder at 700 nm, Dialysis tubing experiment showed that 95.42% of Mo-blue was found in the dialysis tubing suggesting that the molybdate reduction seen in this bacterium was catalyzed by enzyme(s). The characteristics of isolate DRY5 suggest that it would be useful in the bioremediation ofmolybdenum-containing waste.


Asunto(s)
Contaminantes Ambientales/metabolismo , Molibdeno/metabolismo , Serratia/metabolismo , Biodegradación Ambiental , Carbono/química , Carbono/metabolismo , Técnicas de Cultivo de Célula , Concentración de Iones de Hidrógeno , Molibdeno/química , Fosfatos/química , Fosfatos/metabolismo , Filogenia , Serratia/genética , Serratia/crecimiento & desarrollo , Serratia/aislamiento & purificación
13.
J Environ Biol ; 30(1): 107-12, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112871

RESUMEN

The presence of acrylamide in the environment poses a threat due to its well known neurotoxic, carcinogenic and teratogenic properties. Human activities in various geographical areas are the main anthropogenic source of acrylamide pollution. In this work, an acrylamide-degrading bacterium was isolated from Antarctic soil. The physiological characteristics and optimum growth conditions of the acrylamide-degrading bacteria were investigated. The isolate was tentatively identified as Pseudomonas sp. strain DRYJ7 based on carbon utilization profiles using Biolog GN plates and partial 16S rDNA molecular phylogeny. The results showed that the best carbon sources for growth was glucose and sucrose with no significant difference in terms of cellular growth between the two carbon sources (p>0.05). This was followed by fructose and maltose with fructose giving significantly higher cellular growth compared to maltose (p<0.05). Lactose and citric acid did not support growth. The optimum acrylamide concentration as a nitrogen source for cellular growth was at 500 mgl(-1). At this concentration, bacterial growth showed a 2-day lag phase before degradation took place concomitant with an increase in cellular growth. The isolate exhibited optimum growth in between pH 7.5 and 8.5. The effect of incubation temperature on the growth of this isolate showed an optimum growth at 15 degrees C. The characteristics of this isolate suggest that it would be useful in the bioremediation of acrylamide.


Asunto(s)
Acrilamida/metabolismo , Contaminantes Ambientales/metabolismo , Pseudomonas/metabolismo , Acrilamida/química , Regiones Antárticas , Biodegradación Ambiental , Cromatografía Líquida de Alta Presión , Contaminantes Ambientales/química , Concentración de Iones de Hidrógeno , Filogenia , Pseudomonas/genética , Pseudomonas/aislamiento & purificación , ARN Ribosómico 16S/química , Microbiología del Suelo , Temperatura
14.
J Environ Biol ; 30(1): 129-34, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112874

RESUMEN

Sodium dodecyl sulfate (SDS) is one of the main components in the detergent and cosmetic industries. Its bioremediation by suitable microorganism has begun to receive greater attention as the amount of SDS usage increases to a point where treatment plants would not be able to cope with the increasing amount of SDS in wastewater. The purpose of this work was to isolate local SDS-degrading bacteria. Screening was carried out by the conventional enrichment-culture technique. Six SDS-degrading bacteria were isolated. Of these isolates, isolate S14 showed the highest degradation of SDS with 90% degradation after three days of incubation. Isolate S14 was tentatively identified as Klebsiella oxytoca strain DRY14 based on carbon utilization profiles using Biolog GN plates and partial 16S rDNA molecular phylogeny. SDS degradation by the bacterium was optimum at 37 degrees 0. Ammonium sulphate; at 2.0 g l(-1), was found to be the best nitrogen source for the growth of strain DRY14. Maximum growth on SDS was observed at pH 7.25. The strain exhibited optimum growth at SDS concentration of 2.0 g l(-1) and was completely inhibited at 10 g l(-1) SDS. At the tolerable initial concentration of 2.0 g l(-1), almost 80% of 2.0 g l(-1) SDS was degraded after 4 days of incubation concomitant with increase in cellular growth. The K(m(app) and V(max(app)) values calculated for the alkylsulfatase from this bacterium were 0.1 mM SDS and 1.07 micromol min(-1) mg(-1) protein, respectively.


Asunto(s)
Klebsiella oxytoca/metabolismo , Dodecil Sulfato de Sodio/metabolismo , Biodegradación Ambiental , Carbono/metabolismo , Concentración de Iones de Hidrógeno , Klebsiella oxytoca/genética , Klebsiella oxytoca/aislamiento & purificación , Nitrógeno/química , Nitrógeno/metabolismo , Filogenia , ARN Ribosómico 16S/química , Sulfatasas/metabolismo , Temperatura
15.
J Environ Biol ; 30(1): 135-8, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112875

RESUMEN

An inhibitive assay of insecticides using Acetylcholinesterase (AChE) from the local fish Clarias batrachus is reported. AChE was assayed according to the modified method of Ellman. Screening of insecticide and heavy metals showed that carbofuran and carbaryl strongly inhibited C. batrachus AChE. The inhibition concentration (IC) IC50 values (and the 95% confidence interval) for both carbofuran and carbaryl inhibition on C. batrachus AChE at 6.66 (5.97-7.52) and 130.00 (119.3-142.5) microg l(-1), respectively was within the IC50 range of Electrophorus electricus at 6.20 (6.03-6.39) and 133.01 (122.40-145.50) microg l(-1), respectively and were much lower than bovine AChE at 20.94 (19.53-22.58) and 418.80 (390.60-451.60) microg l(-1), respectively. The results showed that C. batrachus have the potential to be used as a cheaper and more readily available source of AChE than other more commercially available sources.


Asunto(s)
Acetilcolinesterasa/metabolismo , Bagres/metabolismo , Inhibidores de la Colinesterasa/análisis , Monitoreo del Ambiente/métodos , Contaminantes Ambientales/análisis , Proteínas de Peces/metabolismo , Insecticidas/análisis , Acetilcolinesterasa/química , Acetilcolinesterasa/aislamiento & purificación , Animales , Bovinos , Inhibidores de la Colinesterasa/química , Contaminantes Ambientales/química , Proteínas de Peces/química , Proteínas de Peces/aislamiento & purificación , Insecticidas/química
16.
J Environ Biol ; 30(1): 145-50, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20112877

RESUMEN

A diesel-degrading bacterium has been isolated from a diesel-polluted site. The isolate was tentatively identified as Staphylococcus aureus strain DRY11 based on partial 16S rDNA molecular phylogeny and Biolog GP microplate panels and Microlog database. Isolate 11 showed an almost linear increase in cellular growth with respect to diesel concentrations with optimum growth occurring at 4% (v/v) diesel concentration. Optimization studies using different nitrogen sources showed that the best nitrogen source was potassium nitrite. Sodium nitrite was optimum at 1.2 g l(-1) and higher concentrations were strongly inhibitory to cellular growth. The optimal pH that supported growth of the bacterium was between 7.5 to 8.0 and the isolate exhibited optimal broad temperature supporting growth on diesel from 27 to 37 degrees C. An almost complete removal of diesel components was seen from the reduction in hydrocarbon peaks observed using Solid Phase Microextraction Gas Chromatography analysis after 5 days of incubation. The characteristics of this bacterium suggest that it is suitable for bioremediation of diesel spills and pollutions in the tropics.


Asunto(s)
Gasolina , Hidrocarburos/metabolismo , Staphylococcus aureus/metabolismo , Biodegradación Ambiental , Concentración de Iones de Hidrógeno , Nitritos/química , Nitritos/metabolismo , Nitrógeno/química , Nitrógeno/metabolismo , Filogenia , ARN Ribosómico 16S/química , Nitrito de Sodio/química , Nitrito de Sodio/metabolismo , Microextracción en Fase Sólida , Staphylococcus aureus/genética , Staphylococcus aureus/aislamiento & purificación , Temperatura
17.
Appl Biochem Biotechnol ; 144(3): 283-91, 2008 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-18556817

RESUMEN

A heavy-metal assay has been developed using bromelain, a protease. The enzyme is assayed using casein as a substrate with Coomassie dye to track completion of hydrolysis of casein. In the absence of inhibitors, casein is hydrolysed to completion, and the solution is brown. In the presence of metal ions such as Hg2+ and Cu2+, the hydrolysis of casein is inhibited, and the solution remains blue. Exclusion of sulfhydryl protective agent and ethylenediaminetetraacetic in the original assay improved sensitivity to heavy metals several fold. The assay is sensitive to Hg2+ and Cu2+, exhibiting a dose-response curve with an IC50 of 0.15 mg 1(-1) for Hg2+ and a one-phase binding curve with an IC50 of 0.23 mg 1(-1) for Cu2+. The IC50 value for Hg2+ is found to be lower to several other assays such as immobilized urease and papain assay, whilst the IC50 value for Cu2+ is lower than immobilized urease, 15-min Microtox, and rainbow trout.


Asunto(s)
Bioensayo/métodos , Bromelaínas/antagonistas & inhibidores , Metales Pesados/análisis , Metales Pesados/farmacología , Contaminantes Químicos del Agua/análisis , Contaminantes Químicos del Agua/farmacología , Ananas/enzimología , Bromelaínas/metabolismo , Caseínas/metabolismo , Hidrólisis/efectos de los fármacos , Concentración 50 Inhibidora , Plaguicidas/análisis , Plaguicidas/farmacología , Agua/química , Xenobióticos/análisis , Xenobióticos/farmacología
18.
Appl Biochem Biotechnol ; 144(3): 293-300, 2008 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-18556818

RESUMEN

Molybdenum-reducing activity in the heterotrophic bacteria is a phenomenon that has been reported for more than 100 years. In the presence of molybdenum in the growth media, bacterial colonies turn to blue. The enzyme(s) responsible for the reduction of molybdenum to molybdenum blue in these bacteria has never been purified. In our quest to purify the molybdenum-reducing enzyme, we have devised a better substrate for the enzyme activity using laboratory-prepared phosphomolybdate instead of the commercial 12-phosphomolybdate we developed previously. Using laboratory-prepared phosphomolybdate, the highest activity is given by 10:4-phosphomolybdate. The apparent Michaelis constant, Km for the laboratory-prepared 10:4-phosphomolybdate is 2.56 +/- 0.25 mM (arbitrary concentration), whereas the apparent V(max) is 99.4 +/- 2.85 nmol Mo-blue min(-1) mg(-1) protein. The apparent Michaelis constant or Km for NADH as the electron donor is 1.38 +/- 0.09 mM, whereas the apparent V(max) is 102.6 +/- 1.73 nmol Mo-blue min(-1) mg(-l) protein. The apparent Km and V(max) for another electron donor, NADPH, is 1.43 +/- 0.10 mM and 57.16 +/- 1.01 nmol Mo-blue min(-1) mg(-1) protein, respectively, using the same batch of molybdenum-reducing enzyme. The apparent V(max) obtained for NADH and 10:4-phosphomolybdate is approximately 13 times better than 12-phoshomolybdate using the same batch of enzyme, and hence, the laboratory-prepared phosphomolybdate is a much better substrate than 12-phoshomolybdate. In addition, 10:4-phosphomolybdate can be routinely prepared from phosphate and molybdate, two common chemicals in the laboratory.


Asunto(s)
Bioensayo/métodos , Enterobacter cloacae/enzimología , Enterobacter cloacae/metabolismo , Molibdeno/metabolismo , Absorción , Procesos Heterotróficos , Cinética , Oxidación-Reducción , Fosfatos/metabolismo
19.
Appl Biochem Biotechnol ; 149(1): 33-43, 2008 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-18350385

RESUMEN

A molybdate-reducing bacterium has been locally isolated. The bacterium reduces molybdate or Mo(6+) to molybdenum blue (molybdate oxidation states of between 5+ and 6+). Different carbon sources such as acetate, formate, glycerol, citric acid, lactose, fructose, glucose, mannitol, tartarate, maltose, sucrose, and starch were used at an initial concentration of 0.2% (w/v) in low phosphate media to study their effect on the molybdate reduction efficiency of bacterium. All of the carbon sources supported cellular growth, but only sucrose, maltose, glucose, and glycerol (in decreasing order) supported molybdate reduction after 24 h of incubation. Optimum concentration of sucrose for molybdate reduction is 1.0% (w/v) after 24 h of static incubation. Ammonium sulfate, ammonium chloride, valine, OH-proline, glutamic acid, and alanine (in the order of decreasing efficiency) supported molybdate reduction with ammonium sulfate giving the highest amount of molybdenum blue after 24 h of incubation at 0.3% (w/v). The optimum molybdate concentration that supports molybdate reduction is between 15 and 25 mM. Molybdate reduction is optimum at 35 degrees C. Phosphate at concentrations higher than 5 mM strongly inhibits molybdate reduction. The molybdenum blue produced from cellular reduction exhibits a unique absorption spectrum with a maximum peak at 865 nm and a shoulder at 700 nm. The isolate was tentatively identified as Serratia marcescens Strain Dr.Y6 based on carbon utilization profiles using Biolog GN plates and partial 16s rDNA molecular phylogeny.


Asunto(s)
Molibdeno/metabolismo , Serratia marcescens/metabolismo , Carbono/farmacología , Concentración de Iones de Hidrógeno/efectos de los fármacos , Molibdeno/farmacología , Nitrógeno/farmacología , Oxidación-Reducción/efectos de los fármacos , Fosfatos/farmacología , Filogenia , Serratia marcescens/citología , Serratia marcescens/efectos de los fármacos , Serratia marcescens/aislamiento & purificación , Análisis Espectral , Temperatura
20.
Nutrition ; 14(11-12): 846-52, 1998.
Artículo en Inglés | MEDLINE | ID: mdl-9834927

RESUMEN

The effects of vitamin C and aloe vera gel extract supplementation on induced hepatocarcinogenesis in male Sprague-Dawley rats (120-150 g) by diethylnitrosamine (DEN) and 2-acetylaminofluorene (AAF) was investigated. The severity of the carcinogenesis process was determined by measuring gamma-glutamyl transpeptidase (GGT) and the placental form of glutathione S-transferase (GSTP) histochemically in situ and in plasma and liver fractions. In addition, plasma alkaline phosphatase (ALP) and liver microsomal uridine diphosphate glucuronyl transferase (UDPGT) activity were also determined. Administration of DEN/AAF caused an increase in the surface area and number of enzyme-positive foci (both GGT and GSTP) compared with control. Supplementation of vitamin C or aloe vera gel extract to the cancer-induced rats suppressed this increase significantly (P < 0.05; P < 0.001). Increases in liver UDPGT, GGT, and GSTP activities were also observed with cancer induction that were again suppressed with either vitamin C or aloe vera gel supplementation. Plasma GGT in the DEN/AAF rats were determined monthly for the duration of the experiment and found to be reduced as early as 1 mo with aloe vera gel supplementation and 2 mo with vitamin C supplementation. In conclusion, vitamin C and aloe vera gel extract supplementation were found to be able to reduce the severity of chemical hepatocarcinogenesis.


Asunto(s)
Aloe/uso terapéutico , Ácido Ascórbico/farmacología , Neoplasias Hepáticas Experimentales/prevención & control , Fitoterapia , Plantas Medicinales , 2-Acetilaminofluoreno , Fosfatasa Alcalina/sangre , Análisis de Varianza , Animales , Dietilnitrosamina , Glutatión Transferasa/metabolismo , Inmunohistoquímica , Neoplasias Hepáticas Experimentales/metabolismo , Neoplasias Hepáticas Experimentales/patología , Masculino , Ratas , Ratas Sprague-Dawley , Uridina Difosfato/metabolismo , gamma-Glutamiltransferasa/metabolismo
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