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1.
New Microbes New Infect ; 48: 100999, 2022 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-35873064

RESUMEN

Background: Antibiotic-resistance in E. coli is a global issue affecting humans especially the pediatric population. Antibiotic-resistant E. coli is a pathogen frequently pediatric population as well as healthy adults. Methods: This study aimed to examine the antibiotic resistance of E. coli causing pediatric diarrhea and its drug-resistant rates, its adhering abilities to cell line in vitro, and inhibition efficiency of a few selected chemical compounds. Clinical strains were isolated from both the healthy and infected pediatric population of Mizoram. Results: Adhesion is a significant pathogenic process during bacterial infections, which has been employed for pathotyping of DEC by comparing adhesion efficiency in both normal (CHO-k1) and cancer (HeLa) cell lines. E. coli adherent pathotypes were identified by both PCR assay and in-vitro cell adhesion assays; the study also evaluated the adhesion inhibition ability of human skimmed milk, gentamicin, and cephalexin in-vitro. Of all isolates, 20.05% of adherent DEC (EPEC, DAEC, and EIEC) and 11.39 % of non-adherent DEC (STEC and ETEC) were found to be associated with pediatric diarrhoea in Mizoram. Human skimmed milk has a high potential adhesion inhibition against EAEC (50.25/90.90 µg/mL), EPEC (53.42/259.70 µg/mL), and EIEC (59.13/30.30 µg/mL) in both cell lines in comparison with gentamicin and cephalexin. Conclusion: This study concludes that as a dietary supplement-human skimmed milk has high potential to prevent adhesion of DEC pathotypes in cells in-vitro thus in in-vivo.

2.
J Tradit Complement Med ; 8(4): 506-514, 2018 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-30302331

RESUMEN

In view of the overall health impact of NIDDM, inventers understand the necessity of improving glycemic control in adults with type 2 diabetes. BGR-34 provides an effective treatment option for adults with type 2 diabetes who have been inadequately controlled on lifestyle with or without other oral hypoglycemic agents (OHGAs) such as metformin, sulfonylurea, or a glitazones. BGR-34 is an appropriate option to consider for addition to a managed care drug formulary. Treatment with BGR-34 produced clinically relevant and statistically significant reductions in all three key measures of glucose control studied -FPG, PPBG and HbA1c- when compared with placebo. BGR-34, showed the promising result with respect to glycemic parameters in NIDDM patient with a significant reduction in fasting blood sugar by 34.3%, postprandial blood sugar 35.5% & glycosylated haemoglobin by 20.31% as compared to placebo group showing a reduction by 13.2%, 10.9% & 10.87% respectively. The trial has also been registered to CTRI, India. This study has been registered in the clinical trial registry-India.

3.
Virusdisease ; 29(1): 89-95, 2018 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-29607364

RESUMEN

The present study focused on the detection and genetic characterisation of 5' untranslated region (5'UTR) and E2 gene of classical swine fever virus (CSFV, family Flaviviridae, genus Pestivirus) from bovine population of the northeastern region of India. A total of 134 cattle serum samples were collected from organised cattle farms and were screened for CSFV antigen with a commercial antigen capture enzyme linked immunosorbent assay (Ag-ELISA) and reverse transcription-polymerase chain reaction (RT-PCR). A total of 10 samples were positive for CSFV antigen by ELISA, while all of them were positive in PCR for 5'UTR region. Full length E2 region of CSFV were successfully amplified from two positive samples and used for subsequent phylogenetic analysis and determination of protein 3D structure which showed similarity with reported CSFV isolate from Assam of sub-genogroup 2.1, with minor variations in protein structure.

4.
Water Sci Technol ; 77(3-4): 999-1006, 2018 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-29488963

RESUMEN

An appropriate current collector (CC) is crucial for harvesting substantial power in a microbial fuel cell (MFC). In the present study, stainless steel (SS) and titanium wires were used as the CCs for both the anode and cathode of MFC-1 and MFC-2, respectively. Tungsten wire (TW) was used as the anode CC in MFC-3, with SS wire as the cathode CC. In MFC-4, TW was used as the cathode CC with SS wire as the anode CC, and in MFC-5 both electrode CCs were TW. The power density, current density, oxidation current and bio-capacitance were compared to select the best and most cost effective CC material to enhance the power output of MFCs. Maximum power densities (mW/m2) of 32.28, 93.10, 225.38, 210.74, and 234.88 were obtained in MFC-1, MFC-2, MFC-3, MFC-4, and MFC-5, respectively. The highest current density (639.86 mA/m2) and coulombic efficiency (23.12 ± 1.5%) achieved in MFC-5 showed TW to be the best CC for both electrodes. The maximum oxidation current of 7.4 mA and 7 mA and bio-capacitance of 10.3 mF/cm2 and 9.7 mF/cm2 were achieved in MFC-3 and MFC-5, respectively, suggesting TW is the best as the anode CC and SS wire as the cathode CC to reduce MFC fabrication costs.


Asunto(s)
Fuentes de Energía Bioeléctrica , Electrodos , Acero Inoxidable , Titanio , Tungsteno
5.
Bioresour Technol ; 252: 66-71, 2018 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-29306131

RESUMEN

The aim of this research was to develop a procedure for rapid detection of electrogenic activity of the inoculums using electrochromic tungsten trioxide (WO3) quantum rods, which display blue colouration under an electric field. Optimum dosage of WO3 and sludge concentration to be used for absorbance measurement were determined to estimate electrogenic activity based on blue colouration. Performance of seven MFCs was evaluated using different volumetric ratios of mixed anaerobic sewage sludge and Shewanella putrefaciens as inoculums. Absorbance of inoculums used in MFCs was measured after addition of optimum dosage of WO3 and a correlation is established between this absorbance and respective current densities/CE, obtained in MFCs during steady state operation. This correlation of current densities/CE with absorbance of inoculum can be used to select proper inoculum having highest electrogenic activity, and to predict possible current generation of MFCs, even before start-up, based on the electrogenic activity of inoculum used.


Asunto(s)
Fuentes de Energía Bioeléctrica , Óxidos , Tungsteno , Electrodos , Aguas del Alcantarillado
6.
Kathmandu Univ Med J (KUMJ) ; 16(61): 14-17, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30631010

RESUMEN

Background Diagnosis and treatment of tuberculosis is vital for health system to identify, treat patients as early as possible and to reduce frequency of new cases of a disease among the contacts of known cases. Objective To determine the diagnostic and treatment delay in the urban population of the western, Nepal and factors associated to it. Method An institutional based cross-sectional study was conducted in urban area of Western Nepal. Category I 142 TB patients aged over 15 years visiting DOTs centre during period of three months were included in study. Interview schedule was designed to elicit information on socio- demographic characteristics and history of symptoms. Diagnostic and treatment delay was calculated, chi square test was applied to find associations and non - parametric tests (Mann Whitney U test and Kruskal Wallis H test) for evaluating group differences. Result Out of 142 TB clients, mean age was 38.12 years. Majority (58%) were males. Around 44% belong to upper, 30% middle and 26% lower economic class. Study showed median diagnostic delay 34 days (Q3 =68 Days, Q1 =19 Days), treatment delay less than a day (Q3 =1 Day, Q1 =0 Day) and total delay 33.50 days (Q3 =71 Days, Q1 =19 Days). Smear positive patients had significantly higher risk of diagnostic delay compared to negative (OR=2.18. P=0.035). However, no significant associations found between socio-economic/demographic classes with delay. Median delays was more amongst married (Q3 =86 Days, Median =72 days, Q1=24 Days compared to single/separated (Q3 =74 Days, Median =57 days, Q1 =15 Days) and other socio-demographic variables had no significant differences. Conclusion Delay in diagnosis and treatment in Urban region of Western, Nepal was shorter compared to other places in Nepal and neighboring countries. Shorter delay for smear negative pulmonary tuberculosis raises doubt that cases are not examined according to the national TB control programs manual.


Asunto(s)
Diagnóstico Tardío/estadística & datos numéricos , Tiempo de Tratamiento/estadística & datos numéricos , Tuberculosis/diagnóstico , Población Urbana , Adolescente , Adulto , Estudios Transversales , Femenino , Humanos , Masculino , Persona de Mediana Edad , Nepal , Tuberculosis/tratamiento farmacológico , Tuberculosis Pulmonar/diagnóstico
7.
Indian J Microbiol ; 56(2): 182-189, 2016 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-27570310

RESUMEN

Emergence of antimicrobial resistance mediated through New Delhi metallo-ß-lactamases (NDMs) is a serious therapeutic challenge. Till date, 16 different NDMs have been described. In this study, we report the molecular and structural characteristics of NDM-5 isolated from an Escherichia coli isolate (KOEC3) of bovine origin. Using PCR amplification, cloning and sequencing of full blaNDM gene, we identified the NDM type as NDM-5. Cloning of full gene in E. coli DH5α and subsequent assessment of antibiotic susceptibility of the transformed cells indicated possible role of native promoter in expression blaNDM-5. Translated amino acid sequence had two substitutions (Val88Leu and Met154Leu) compared to NDM-1. Theoretically deduced isoelectric pH of NDM-5 was 5.88 and instability index was 36.99, indicating a stable protein. From the amino acids sequence, a 3D model of the protein was computed. Analysis of the protein structure elucidated zinc coordination and also revealed a large binding cleft and flexible nature of the protein, which might be the reason for broad substrate range. Docking experiments revealed plausible binding poses for five carbapenem drugs in the vicinity of metal ions. In conclusion, results provided possible explanation for wide range of antibiotics catalyzed by NDM-5 and likely interaction modes with five carbapenem drugs.

8.
Epidemiol Infect ; 144(13): 2780-9, 2016 10.
Artículo en Inglés | MEDLINE | ID: mdl-27113208

RESUMEN

Rotavirus (RV) infection causes acute infantile diarrhoea in humans and animals and remains a major concern for vaccine development. The close proximity of humans to animals may foster cross-species infection resulting in the emergence of novel/unusual strains by genetic reassortment. In this study, we characterized 500 diarrhoeal samples for group A rotaviruses (RVA) from children (n = 290), piglets (n = 95) and calves (n = 115) in Northeast India during 2012-2013. The data showed that 142/500 (28·4%) faecal samples were positive for RVA with the highest level of infection detected in piglets (57/142, 40·1%) followed by children (51/142, 35·9%) and calves (34/142, 23·9%). Sequence-based G- and P-typing showed G1P[8] (25%) and G1P[7] (35%) were the prevailing genotypes in both humans and animals. Single cases of unusual genotypes, i.e. G9P[8], G5P[8] in humans and G1P[13], G1P[23] and G3P[7] in animals were also identified. Cluster analyses of the sequences showed regional strains were genetically closer to their homologous strains. However, human G5P[8] and porcine G1P[8] strains showed homology to heterologous hosts of their prototype strains. The subsequent global spread of unusual RV strains may result in their establishment over time, presenting challenges to future vaccine evaluation programmes. More studies on emerging genotypes are required to elucidate how RVA strains evolve post-vaccination. This study supports the need for continuous surveillance of RVA infections after detecting from diverse hosts in a common setting.


Asunto(s)
Enfermedades de los Bovinos/epidemiología , Diarrea/epidemiología , Genotipo , Infecciones por Rotavirus/epidemiología , Rotavirus/genética , Enfermedades de los Porcinos/epidemiología , Enfermedad Aguda , Animales , Bovinos , Enfermedades de los Bovinos/virología , Preescolar , Diarrea/veterinaria , Diarrea/virología , Heces/virología , Humanos , India/epidemiología , Lactante , Recién Nacido , Filogenia , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Infecciones por Rotavirus/veterinaria , Infecciones por Rotavirus/virología , Análisis de Secuencia de ARN , Porcinos , Enfermedades de los Porcinos/virología
9.
Epidemiol Infect ; 143(12): 2503-11, 2015 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-25573161

RESUMEN

A restriction fragment length polymorphism (RFLP) assay was developed to examine the genetic relationship between 67 (29 Indian, 38 global) rotavirus isolates of human, bovine and porcine neonates. The assay involved direct digestion of RT-PCR amplified VP7 cDNAs with three restriction enzymes (VspI, HaeIII, NlaIV) independently. Forty-eight RFLP patterns were identified for all 67 strains, and of these 20 patterns were associated with Indian isolates. A correlation between the restriction patterns and G type was apparent through deduction of enzyme restriction sites from known sequences. Major G serotypes (G1, G2, G6, G8) with a few mixed types could be differentiated where there was a positive assortment of intrinsic serotypes from multiple host origin, and certain single or combined enzyme profiles were highly dominant in the population. Significant genetic variations were established between global and Indian isolates and none of the RFLP patterns were shared between them. These data suggest that the Indian wild-type rotavirus population is distinguishable based on the VP7 gene, and co-circulation of distinct strains in different hosts is foremost, indicating the possible likelihood of inter-species transmission.


Asunto(s)
Antígenos Virales/genética , Proteínas de la Cápside/genética , Polimorfismo de Longitud del Fragmento de Restricción , Rotavirus/clasificación , Rotavirus/genética , Animales , Animales Recién Nacidos , Bovinos , ADN Complementario/análisis , Desoxirribonucleasas de Localización Especificada Tipo II , Humanos , India , Recién Nacido , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Rotavirus/aislamiento & purificación , Serogrupo , Porcinos
10.
Indian J Lepr ; 87(2): 101-7, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-27506008

RESUMEN

Upgrading typel lepra reaction or reversal reaction (RR) is an acute inflammatory complication of leprosy and a disparity exists between clinicians and pathologists for diagnosing a RR. Inter-observer variations among pathologists also compound this problem as no universally agreed diagnostic criteria exist. 120 biopsies and H&E stained slides were assessed by 3 pathologists. The pathologists were blinded to the clinical diagnosis and to each other's observations. Each pathologist assigned a likelihood of reaction by their histopathological observations as definitely reaction, probable reaction and no reaction. Clinicopathological correlation and interobserver agreement was analyzed statistically. Discordance between clinical and histopathological diagnosis was seen in 30.8% by pathologist 1 (P1), 23.7% by pathologist 2 (P2) and 34.5% bythe pathologist 3 (P3). Dermal edema, intragranuloma edema and epidermal erosion were consistent findings by all observers. Definite reaction was seen in 54.2% of cases by P1, 53.3% by P2 and 34.5% by P3. Kappa statistics for strength of agreement showed good agreement between 3 pathologists with P1 (κ = 0.83), P2 (κ = 0.61), P3 (κ = 0.62). RR are underdiagnosed on histopathological examination but this study shows that dermal edema, edema within the granuloma and partial obliteration of grenz zone by granuloma are reliable clues to diagnose a RR on histopathology.


Asunto(s)
Lepra/diagnóstico , Adulto , Biopsia , Femenino , Histología , Humanos , Lepra/patología , Masculino , Variaciones Dependientes del Observador
11.
BJPsych Int ; 12(RESEARCH): S3-S6, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-29093878

RESUMEN

We investigated the efficacy of aerobic exercise alongside antidepressant medication as an adjuvant maintenance treatment for depression. Fifty patients in remission were randomly assigned to either medication only or medication plus exercise. Assessment of psychopathology was made at 6-weekly intervals (for 24 weeks) using the Hamilton Rating Scale for Depression. The medication-plus-exercise group showed significantly more improvement at 12 and 24 weeks than the medication-only group. This study adds to a growing evidence base that suggests aerobic exercise is worthy of further development in the treatment of depressive disorders.

12.
Indian J Med Microbiol ; 32(2): 169-71, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24713905

RESUMEN

A total of 37 street vended food samples were examined for bacterial and the colony forming units counts ranged from 4.5 × 105 to 1.12 × 106. The isolates were identified as Escherichia coli (37.5%), Pseudomonas aeruginosa (3.57%), Staphylococcus aureus (14.20%), Salmonella sp. (5.36%), Klebsiella sp. (10.71%), Shigella sp. (19.64%) and Enterobacter sp. (8.93%) respectively. All the 56 isolates were susceptible to ciprofloxacin while their susceptibility to the other drugs varied. These findings demonstrated that the ready-to-eat foods vended in Silchar city constitute an important potential hazard to human health and provision of health education to the vendors would improve quality of street foods.


Asunto(s)
Microbiología de Alimentos , Comercio , Escherichia coli/aislamiento & purificación , Contaminación de Alimentos , India , Salmonella/aislamiento & purificación , Shigella/aislamiento & purificación , Staphylococcus aureus/aislamiento & purificación
13.
Plant Mol Biol ; 84(1-2): 1-18, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-23975146

RESUMEN

The human population is increasing at an alarming rate, whereas heavy metals (HMs) pollution is mounting serious environmental problem, which could lead to serious concern about the future sufficiency of global food production. Some HMs such as Mn, Cu, and Fe, at lower concentration serves as an essential vital component of plant cell as they are crucial in various enzyme catalyzed biochemical reactions. At higher concentration, a vast variety of HMs such as Mn, Cu, Cd, Fe, Hg, Al and As, impose toxic reaction in the plant system which greatly affect the crop yield. Recently, microRNAs (miRNAs) that are small class of non-coding riboregulator have emerged as central regulator of numerous abiotic stresses including HMs. Increasing reports indicate that plants have evolved specialized inbuilt mechanism viz. signal transduction, translocation and sequestration to counteract the toxic response of HMs. Combining computational and wet laboratory approaches have produced sufficient evidences concerning active involvement of miRNAs during HMs toxicity response by regulating various transcription factors and protein coding genes involved in plant growth and development. However, the direct role of miRNA in controlling various signaling molecules, transporters and chelating agents of HM metabolism is poorly understood. This review focuses on the latest progress made in the area of direct involvement of miRNAs in signaling, translocation and sequestration as well as recently added miRNAs in response to different HMs in plants.


Asunto(s)
Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Metales/toxicidad , MicroARNs/metabolismo , Plantas/efectos de los fármacos , Regulación de la Expresión Génica de las Plantas/fisiología , Humanos , Plantas/genética
14.
Indian Pediatr ; 51(12): 991-5, 2014 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-25560157

RESUMEN

NEED AND PURPOSE OF REVIEW: Psychotic symptoms appear in children and adolescents in the most crucial years, during the individual's career development. The challenges faced by parents of psychotic children are in dealing with their disruptive behaviours, negative symptoms, cognitive deficits, delusions and hallucinations. This paper presents an overview of the childhood psychosis and how parenting can be done effectively for this population. METHODS: Articles were retrieved from the Medline, Cochrane database, Google Scholar, Medscape; using the search terms 'parenting and childhood psychosis', and 'childhood psychoses; and standard textbooks were consulted. MAIN CONCLUSIONS: Educating parents how to recognize early symptoms, explaining treatment adherence, side effects of medications along with non-pharmacological measures like dealing with expressed emotions, lowering expectations, enhancing social supports, healthy lifestyle, and making patients independent. Awareness, early identification and effective parenting for psychosis may help bridge the wide gap between scarce skilled mental health professionals, inefficient resources and large paediatric population.


Asunto(s)
Responsabilidad Parental/psicología , Padres/psicología , Trastornos Psicóticos/psicología , Adolescente , Niño , Humanos , Trastornos Mentales/diagnóstico , Trastornos Mentales/fisiopatología , Trastornos Mentales/terapia , Padres/educación , Trastornos Psicóticos/diagnóstico , Trastornos Psicóticos/fisiopatología , Trastornos Psicóticos/terapia
15.
Evol Bioinform Online ; 9: 437-52, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24250219

RESUMEN

Major facilitators of water movement through plant cell membranes include aquaporin proteins. Wheat is among the largest and most important cereal crops worldwide; however, unlike other model plants such as rice, maize and Arabidopsis, little has been reported on wheat major intrinsic proteins (MIPs). This study presents a comprehensive computational identification of 349 new wheat expressed sequence tags (ESTs), encoding 13 wheat aquaporin genes. Identified aquaporins consist of 6 plasma membrane intrinsic proteins (PIP) and 1 TIP showing high sequence similarity with rice aquaporins. We also identified 4 NOD26-like intrinsic proteins (NIP) and 2 SIP members that showed more divergence. Further, expression analysis of the aquaporin genes using the available EST information in UniGene revealed their transcripts were differentially regulated in various stress- and tissue-specific libraries. Allele specific Polymerase chain reaction (PCR) primers based on single nucleotide polymorphism (SNP) were designed using PIP as the target gene and validated on a core set of Indian wheat genotypes. A 3D theoretical model of the wheat aquaporin protein was built by homology modeling and could prove to be useful in the further functional characterization of this protein. Collectively with expression and bioinformatics analysis, our results support the idea that the genes identified in this study signify an important genetic resource providing potential targets to modify the water use properties of wheat.

16.
Chemosphere ; 92(8): 949-54, 2013 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-23545189

RESUMEN

A new combinational fungicide formulation trifloxystrobin 25%+tebuconazole 50% (Nativo 75WG), introduced as a part of resistance management strategy, was studied for dissipation behaviour on apple fruits. Nativo 75WG was sprayed twice at the rate of 400 g and 800 g a.i. ha(-1) equal to trifloxystrobin application rate of 100 and 200 g a.i. ha(-1) and tebuconazole at application rate of 200 and 400 g a.i. ha(-1) at four different locations in the Northwest Himalayan region of India. The fruit samples collected at 10d interval and soil samples taken at harvest time were analyzed after second spray. The residual concentrations of trifloxystrobin, its acid metabolite CGA 321113 and tebuconazole were measured. Residues of both fungicides were determined by using gas chromatograph, Agilent 6890N having electron capture detector. The mean initial deposits of trifloxystrobin at four locations were found to be in the range of 0.333-0.387 mg kg(-1) and 0.512-0.714 mg kg(-1) at the application rate of 100 and 200 g a.i. ha(-1), and half-life were found between 19.38-24.93 d and 19.84-28.86 d at the respective doses. The Σ-trifloxystrobin and tebuconazole residues were below determination limit in 40 d apple fruits and soil samples. Initial deposits of trifloxystrobin and tebuconazole were below their Codex MRLs at the respective single doses. The half life value of the tebuconazole deposits ranged between 19.38-25.99 d and 19.84-28.86 d at the respective single and double dose. The study thus suggests 1d pre harvest interval for safe consumption of apple fruit after the application of Nativo 75 WG at single dose.


Asunto(s)
Acetatos/química , Fungicidas Industriales/química , Iminas/química , Malus/química , Residuos de Plaguicidas/química , Contaminantes del Suelo/química , Triazoles/química , Acetatos/análisis , Cromatografía de Gases , Monitoreo del Ambiente , Frutas/química , Fungicidas Industriales/análisis , Semivida , Iminas/análisis , India , Cinética , Metacrilatos/análisis , Metacrilatos/química , Residuos de Plaguicidas/análisis , Contaminantes del Suelo/análisis , Estrobilurinas , Triazoles/análisis
17.
Genet Mol Res ; 12(1): 537-51, 2013 Feb 27.
Artículo en Inglés | MEDLINE | ID: mdl-23512671

RESUMEN

The antioxidant system in plants is a very important defensive mechanism to overcome stress conditions. We examined the expression profile of antioxidant enzymes superoxide dismutase (SOD), catalase (CAT) and ascorbate peroxidase (APX) using a bioinformatics approach. We explored secondary structure prediction and made detailed studies of signature pattern of antioxidant proteins in four plant species (Triticum aestivum, Arabidopsis thaliana, Oryza sativa, and Brassica juncea). Fingerprinting analysis was done with ScanProsite, which includes a large collection of biologically meaningful signatures. Multiple sequence alignment of antioxidant proteins of the different plant species revealed a conserved secondary structure region, indicating homology at the sequence and structural levels. The secondary structure prediction showed that these proteins have maximum tendency for α helical structure. The sequence level similarities were also analyzed with a phylogenetic tree using neighbor-joining method. In the antioxidant enzymes SOD, CAT and APX, three major families of signature were predominant and common; these were PKC_PHOSPHO_SITE, CK2_PHOSPHO_SITE and N-myristoylation site, which are functionally related to various plant signaling pathways. This study provides new strategies for screening of biomodulators involved in plant stress metabolism that will be useful for designing degenerate primers or probes specific for antioxidant. These enzymes could be the first line of defence in the cellular antioxidant defence pathway, activated due to exposure to abiotic stresses.


Asunto(s)
Perfilación de la Expresión Génica , Proteínas de Plantas/genética , Plantas/enzimología , Plantas/genética , Secuencia de Aminoácidos , Antioxidantes/metabolismo , Arabidopsis/enzimología , Arabidopsis/genética , Ascorbato Peroxidasas/clasificación , Ascorbato Peroxidasas/genética , Catalasa/clasificación , Catalasa/genética , Simulación por Computador , Regulación Enzimológica de la Expresión Génica , Regulación de la Expresión Génica de las Plantas , Datos de Secuencia Molecular , Planta de la Mostaza/enzimología , Planta de la Mostaza/genética , Oryza/enzimología , Oryza/genética , Peroxidasas/clasificación , Peroxidasas/genética , Filogenia , Proteínas de Plantas/clasificación , Plantas/clasificación , Homología de Secuencia de Aminoácido , Especificidad de la Especie , Superóxido Dismutasa/clasificación , Superóxido Dismutasa/genética , Triticum/enzimología , Triticum/genética
18.
Plant Dis ; 96(10): 1580, 2012 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-30727328

RESUMEN

Annual surveys of pathogen populations have monitored the changing pathotype situation of Puccinia triticina that causes leaf (brown) rust of wheat, to release and deploy rust-resistant cultivars of wheat in India. In surveys during 2009 to 2010, samples of leaf rust infecting wheat were collected from the Solan district of Himachal Pradesh. The samples were established on susceptible wheat cv. Agra Local and pathotypes were identified on three differentials following binomial nomenclature (3). Based on the infection types on sets of differentials, this sample was found different to all the known pathotypes of P. triticina from India. This report records a new pathotype of race group 104 of P. triticina from India. Unique feature of this pathotype is its avirulence to Lr3 (Democrat) and virulence to Lr10, Lr13, Lr23, Lr26. These genes are the most common resistance genes in Indian wheat material (1). It appears to be a result of reverse mutation on Lr3 in pathotype 21R63 (104-3). In 2012, this pathotype was detected in 5% of samples from northern India. The new pathotype produces susceptible infection type on Lr10 to which 104 groups gives mesothetic response (4). When compared to other pathotypes of the 104 group, it was different to pathotype 29R23 (104B) in avirulence to Lr26, to which pathotype 93R57 (104-4) is virulent. All the other pathotypes of the 104 group are virulent to Lr3, to which new pathotypes are avirulent. The new pathotype produces resistant response on Lr2a, Lr3, Lr9, Lr15, Lr19, Lr24, Lr25, Lr28, Lr32, Lr39, Lr45, Lr47, and susceptible response on Lr1, Lr2b, Lr2c, Lr10, Lr11, Lr12, Lr13, Lr14a, Lr14b, Lr14ab, Lr16, Lr17a, Lr17b, Lr18, Lr20, Lr21, Lr22a, Lr22b, Lr23, Lr26, Lr27+31, Lr29, Lr30, Lr33, Lr34, Lr35, Lr36, Lr37, Lr38, Lr40, Lr44, Lr46, Lr48, Lr49, Lr51, and Lr57. It is designated as NHKSP on international differentials. A live culture is being maintained as well as cryo-preserved in the National Repository of Pathotypes at the Regional Station of Directorate of Wheat Research, Shimla. Initial evaluation of 700 Indian and exotic wheat lines revealed that more than 500 lines possesses resistance to this pathotype. The identity of the pathotype was also confirmed by sequencing the internal transcribed spacer region of the rDNA with the primers ITS1/ITS4 (GenBank Accession No. JX020949) (2). Analysis of rDNA sequence identified this pathotype as a variant of P. triticina. The strain was most similar to ANK9538 of P. triticina (Accession No. DQ 147418, 98%) and 77-5 strain of P. triticina (Accession No. JQ360856, 93%). Identification of pathotypes from wheat growing areas in the initial stages is a prime effort that helps in developing ecologically safe, economic, and effective ways to manage wheat rusts. References: (1) S. C. Bhardwaj et al. Indian Phytopathol. 63:174, 2010. (2) M. A. Innis et al. PCR Protocols: A Guide to Methods and Applications. Academic Press. San Diego, CA, 1990. (3) S. Nagarajan et al. Curr. Sci. 52:413, 1983. (4) S. K. Nayar et al. Indian Phytopathol. 51:290, 1998.

19.
Domest Anim Endocrinol ; 41(4): 195-206, 2011 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-21885231

RESUMEN

In the present study, buffalo granulosa cells were cultured under serum-free conditions and characterized to study the changes in gene expression associated with the transition of granulosa cells from estrogen- to progesterone-secreting phenotype. The cells were cultured in vitro under completely serum-free conditions for 8 d. Gene expression and hormone analysis showed that on day 4 granulosa cells exhibit FSH responsiveness with preovulatory phenotype having highest CYP19 gene expression and 17ß-estradiol production, whereas a significant increase in transcript abundance of STAR, CYP11, and HSD3B genes accompanied with an increase in progesterone production was observed on day 8. Cells treated with LH on day 4 followed by gene expression analysis at 1, 2, 4, 6, 18, and 24 h showed significant increase in transcripts of LH-responsive genes. In conclusion, culture condition used in the present study showed that granulosa cells were FSH responsive and attained attributes of granulosa cells of dominant follicles at day 4 with highest CYP19 and LHR gene expression beyond which they acquired the ability to luteinize and thus were more LH responsive. In addition, after LH treatment, analysis of early LH-responsive genes (EGR2, RUNX1, and NR4A1) on day 4 showed that granulosa cells at this stage in culture exhibits phenotype similar to that of preovulatory follicles before LH surge in vivo and corresponds to the in vivo transition of well-orchestrated gene expression profile after LH surge. The characterized culture conditions represent a suitable in vitro model for analysis of genes involved in terminal differentiation of granulosa cells from FSH- to LH-responsive phenotype during folliculogenesis in buffalo.


Asunto(s)
Búfalos/genética , Búfalos/metabolismo , Hormona Folículo Estimulante/farmacología , Regulación de la Expresión Génica/fisiología , Células de la Granulosa/metabolismo , Hormona Luteinizante/farmacología , Animales , Técnicas de Cultivo de Célula , Proliferación Celular , Medio de Cultivo Libre de Suero , Relación Dosis-Respuesta a Droga , Femenino , Hormona Folículo Estimulante/administración & dosificación , Perfilación de la Expresión Génica , Células de la Granulosa/citología , Factor I del Crecimiento Similar a la Insulina/administración & dosificación , Factor I del Crecimiento Similar a la Insulina/farmacología , Hormona Luteinizante/administración & dosificación
20.
Eur Rev Med Pharmacol Sci ; 15(8): 883-7, 2011 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-21845798

RESUMEN

OBJECTIVE: The aim of the present study was to isolate and identify Aeromonas (A.) species and assess their toxin producing ability in foods of animal origin from North East India. MATERIALS AND METHODS: A total of 332 animal food samples (fish, poultry meat, pork and chevon) of which 38 (11.44%) isolates were identified by the 16S rRNA technique were included in the study. The enterotoxigenicity of the isolates was measured by the Mouse Paw Oedema Test (MPOT), rabbit ileal loop (RIL) and vascular permeability reaction (VPR) test. RESULTS: Maximum positivity was shown by the samples from fish (13.13%), followed by poultry meat (11.5%), pork (9.85%) and chevon (2.5%). A. hydrophila was the predominant species (92.10%) followed by A. sobria (5.26%) and A. caviae (2.63%). CONCLUSIONS: All the Aeromonas strains isolated by culture methods expressed enterotoxigenicity by MPOT, RIL assay and VPR test.


Asunto(s)
Aeromonas/aislamiento & purificación , Enterotoxinas/aislamiento & purificación , Enterotoxinas/farmacología , Peces/microbiología , Microbiología de Alimentos/métodos , Carne/microbiología , Aeromonas/genética , Aeromonas/metabolismo , Animales , India , ARN Ribosómico 16S/genética , Pruebas de Toxicidad/métodos
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