RESUMEN
OBJECTIVES: Carbapenemase-producing Enterobacterales (CPE) are high priority targets of global antimicrobial surveillance. Herein, we determined the colonization rate of CPE on admission to intensive care units in Vientiane, Lao PDR in August-September 2019. METHODS: Data regarding clinical conditions, infection control, and antibiotic usage were collected during admission. Rectal swab samples (n = 137) collected during admission were inoculated to selective chromogenic agars, followed by confirmatory tests for extended-spectrum beta-lactamases and carbapenemases. All CPE isolates were sequenced on Illumina (HiSeq2500), reads assembled using SPAdes 3.13, and the draft genomes used to query a database (https://www.genomicepidemiology.org) for resistome, plasmid replicons, and sequence types (ST). Optical DNA mapping (ODM) was used to characterize plasmids and to determine location of resistance genes. Minimum spanning tree was generated using the Bacterial Isolate Genome Sequence database (BIGSdb) and annotated using iTOL. RESULT: From 47 Enterobacterales isolated on selective agars, K. pneumoniae (25/47) and E. coli (12/47) were the most prevalent species, followed by K aerogenes (2/47), K. variicola (1/47), and K. oxytoca (1/47). The overall prevalence of ESBLs was 51.0%; E. coli 83.3% (10/12) and Klebsiella spp. 41.3% (12/29). Twenty percent of the K. pneumoniae (5/25) isolates were carbapenem-resistant, and 4/5 contained the blaNDM-1 gene. All blaNDM-1 isolates belonged to ST147 and were indistinguishable with cgMLST. ODM showed that the blaNDM-1 gene was located on identical plasmids in all isolates. CONCLUSION: The prevalence of ESBL-producing Enterobacterales was high, while carbapenemases were less common. However, the detection of clonal dissemination of blaNDM-1-producing K. pneumoniae isolates in one of the intensive care units calls for vigilance. Stringent infection prevention and antimicrobial stewardship strategies are highly important measures.
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Infecciones por Klebsiella , Klebsiella pneumoniae , Antibacterianos/farmacología , Antibacterianos/uso terapéutico , Proteínas Bacterianas/genética , Proteínas Bacterianas/uso terapéutico , Carbapenémicos/uso terapéutico , Farmacorresistencia Bacteriana Múltiple/genética , Escherichia coli/genética , Humanos , Unidades de Cuidados Intensivos , Infecciones por Klebsiella/microbiología , Laos , Pruebas de Sensibilidad Microbiana , Plásmidos/genética , beta-Lactamasas/genética , beta-Lactamasas/uso terapéuticoRESUMEN
[This corrects the article DOI: 10.1093/ofid/ofaa492.].
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We performed whole-genome sequencing of Vibrio cholerae O1 isolates from Laos, Thailand, and Vietnam, where cholera outbreaks occurred, to determine their genetic lineages. Core genome phylogenetic analysis revealed that the isolates located in same lineage without regional clusters, which suggests that closely related strains circulated in Southeast Asia.
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This study aims to identify the pathogens of diarrhea in Vientiane Capital, Lao People's Democratic Republic (Lao PDR). The data of 2482 patients who visited eight health facilities due to diarrhea in 2012-2015 were retrospectively reviewed. Stool or rectal swabs collected from all patients were tested for bacteria. Children who were under 5 years old were additionally tested for rotavirus. Of 2482 cases, 1566 cases were under 5 years old, and at least one enteropathogen was detected in 475 cases (19.1%). Salmonella species was the most commonly detected bacterial pathogen. Enteropathogenic Escherichia coli (EPEC) and Salmonella species was the major pathogen in the dry season and the wet season, respectively. Eighty-seven patients tested positive for multiple bacteria. Rotavirus was detected in 291 children under 5 years old (32.4%), mostly from October to April. The major bacteria of coinfection with rotavirus were EPEC followed by Salmonella species. Salmonella species was the predominant bacterial pathogen of diarrhea of all ages, and rotavirus was the predominant pathogen among children under 5 years old. Further studies examining other types of pathogens for diarrhea and the introduction of a rotavirus vaccine for children are needed in Lao PDR.
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Diarrea/epidemiología , Diarrea/etiología , Vigilancia de Guardia , Enfermedad Aguda , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Bacterias/clasificación , Bacterias/aislamiento & purificación , Niño , Preescolar , Coinfección/epidemiología , Coinfección/etiología , Heces/microbiología , Heces/virología , Femenino , Humanos , Lactante , Laos/epidemiología , Masculino , Persona de Mediana Edad , Estudios Retrospectivos , Rotavirus/aislamiento & purificación , Estaciones del Año , Adulto JovenRESUMEN
Melioidosis is clearly highly endemic in Laos, although the disease has only been diagnosed regularly in humans (1359 cases) since 1999, and only a single animal case has been microbiologically confirmed. Burkholderia pseudomallei is extensively and abundantly present in soil and surface water in central and southern Laos, but the true distribution of the disease across the country remains to be determined. Surveillance is almost non-existent and diagnostic microbiology services are not yet well established, whilst awareness of melioidosis is low amongst policy-makers, healthcare providers, and the public. It is hoped that this situation will improve over the next decade as the country rapidly develops, especially as this is likely to be accompanied by a further increase in the prevalence of diabetes, meaning that more people in this predominantly agricultural population will be at risk of contracting melioidosis.
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Diarrhoeal disease is the second leading cause of death in children under age 5 worldwide, with rotavirus being the main etiology. In the Lao People's Democratic Republic, acute watery diarrhoea (AWD) was introduced as one of the national notifiable diseases in 2004. We retrospectively reviewed the aggregate (n = 117 277) and case-based (n = 67 755) AWD surveillance data from 2009 to 2013 reported weekly from 1115 health facilities nationwide. Rotavirus rapid test data from all eight sentinel sites in Vientiane Capital in 2013 were also collected for analysis. The incidence of AWD ranged between 215 and 476 cases per 100 000 population and increased from 2009 to 2012 when it levelled off. The most affected age group was children under 5 who were about seven to nine times more likely to have AWD than the rest of the population (P < 0.0001). In children under 5, 74.8% of the cases were aged 0-24 months and AWD was 1.28 times more common in males (P < 0.0001). Among the 230 stool specimens tested in children under 5 in 2013, 109 (47.4%) tested positive for rotavirus. The increased AWD incidence over the study period may reflect a true increase in AWD or an improved sensitivity of the system. We recommend new mothers breastfeed up to two years after birth, which is known to reduce AWD morbidity and mortality in young children. We also recommend conducting rotavirus disease burden and cost-effectiveness studies to explore the benefits of introduction of rotavirus vaccine.
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Diarrea/epidemiología , Vigilancia de la Población , Infecciones por Rotavirus/epidemiología , Lactancia Materna/métodos , Lactancia Materna/tendencias , Preescolar , Diarrea/mortalidad , Diarrea/virología , Femenino , Humanos , Incidencia , Lactante , Recién Nacido , Laos/epidemiología , Masculino , Madres , Estudios Retrospectivos , Rotavirus/aislamiento & purificaciónRESUMEN
A cholera outbreak in Laos in July 2010 involved 237 cases, including 4 deaths. Molecular subtyping indicated relatedness between the Vibrio cholerae isolates in this and in a 2007 outbreak, uncovering a clonal group of V. cholerae circulating in the Mekong basin. Our finding suggests the subtyping methods will affect this relatedness.
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Cólera/epidemiología , Cólera/virología , Brotes de Enfermedades , Vibrio cholerae O1/clasificación , Electroforesis en Gel de Campo Pulsado , Humanos , Laos/epidemiología , Tipificación Molecular/métodos , Secuencias Repetidas en Tándem/genética , Vibrio cholerae O1/genética , Vibrio cholerae O1/aislamiento & purificaciónRESUMEN
Recent large-scale outbreaks in the Lao People's Democratic Republic (Lao PDR) were reported in 1993 and 1994 and from 2000 to 2002. On December 23, 2007, a drastic increase in acute watery diarrhea patients at a health center in Sekong Province was reported to the provincial health office. An outbreak investigation was initiated to understand the magnitude of the outbreak, identify new cases, identify the suspected causal agent, implement control measures, and prevent new cases. Through active village based surveillance, 370 cases and 3 deaths were reported from 31 villages between December 15, 2007 and January 29, 2008. Of these reported cases, 29% were under the age of 5. From 28 fresh stool samples taken, 17 (58.6%) were positive for Vibrio cholerae O1 Ogawa strain. Two water sources close to affected villages were found to be contaminated with the same strain of V. cholerae. Control measures implemented included health education for safe household water consumption and early identification and treatment of suspected cholera patients at village level. The cause of the outbreak was suspected to be a combination of contaminated drinking water and person-to-person transmission.
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Cólera/epidemiología , Brotes de Enfermedades , Vibrio cholerae O1/aislamiento & purificación , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Niño , Preescolar , Cólera/microbiología , Heces/microbiología , Femenino , Humanos , Lactante , Laos/epidemiología , Masculino , Persona de Mediana Edad , Microbiología del Agua , Abastecimiento de Agua/análisisRESUMEN
Shigella spp. isolated from diarrheal patients and non-diarrheal carriers were examined by PCR for the presence of two pathogenic genes, chromosomal ipaH and invasive plasmid encoded ial. Shigella spp. were detected in 7 of 72 diarrheal cases examined (9.7%), and 9 of 145 non-diarrheal cases (6.2%). All isolates from diarrheal cases harbored both ipaH and ial, while all isolates from non-diarrheal cases were positive for ipaH but not ial. These results suggested that Shigella spp. in healthy carriers were basically non-pathogenic.
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Portador Sano/microbiología , Disentería Bacilar/microbiología , Shigella/patogenicidad , Adolescente , Adulto , Antígenos Bacterianos/genética , Proteínas Bacterianas/genética , Portador Sano/prevención & control , Niño , Preescolar , Disentería Bacilar/prevención & control , Heces/microbiología , Femenino , Genotipo , Humanos , Lactante , Laos , Masculino , Plásmidos/genética , Serotipificación , Shigella/clasificación , Shigella/genética , Virulencia/genéticaRESUMEN
The incidence of Escherichia coli having pathogenic genes for diarrhea was studied in Laos in 2002. A total of 525 E. coli strains from 278 patients (basically, two E. coli isolates from each patient) were examined by PCR to detect the known pathogenic genes (stx, eae, elt, est, ipaH, and aggR). These genes were detected in 23 strains from 16 patients (16/278: 5.8%). In 10 cases of the 16, one of the two isolates from each individual was negative for the gene, and in the other six cases, both isolates had the gene (same gene in four cases). E. coli having eae but no stx (enteropathogenic E. coli [EPEC]) was found in two cases out of 278 (0.7%). Nevertheless, Class I classical EPEC (serogroup-based) was found in 77 cases (28%). Enterotoxigenic E. coli, enteroaggregative E. coli, and enterohemorrhagic E. coli were found in 9, 4, and 1 cases, respectively. Enteroinvasive E. coli was not detected. This study suggested that the incidence of diarrhea due to E. coli is not as high as has been previously thought.