Phenotypic trait variation in a long-term multisite common garden experiment of Scots pine in Scotland.

Multisite common garden experiments, exposing common pools of genetic diversity to a range of environments, allow quantification of plastic and genetic components of trait variation. For tree species, such studies must be long term as they typically only express mature traits after many years. As well as evaluating standing genetic diversity, these experiments provide an ongoing test of genetic variation against changing environmental conditions and form a vital resource for understanding how species respond to abiotic and biotic variation. Finally, quantitative assessments of phenotypic variation are essential to pair with rapidly accumulating genomic data to advance understanding of the genetic basis of trait variation, and its interaction with climatic change. We describe a multisite, population-progeny, common garden experiment of the economically and ecologically important tree species, Scots pine, collected from across its native range in Scotland and grown in three contrasting environments. Phenotypic traits, including height, stem diameter and budburst were measured over 14 growing seasons from nursery to field site. The datasets presented have a wide range of applications.

Irreproducibility in searches of scientific literature: A comparative analysis.

Repeatability is the cornerstone of science, and it is particularly important for systematic reviews. However, little is known on how researchers' choice of database, and search platform influence the repeatability of systematic reviews. Here, we aim to unveil how the computer environment and the location where the search was initiated from influence hit results.We present a comparative analysis of time-synchronized searches at different institutional locations in the world and evaluate the consistency of hits obtained within each of the search terms using different search platforms.We revealed a large variation among search platforms and showed that PubMed and Scopus returned consistent results to identical search strings from different locations. Google Scholar and Web of Science's Core Collection varied substantially both in the number of returned hits and in the list of individual articles depending on the search location and computing environment. Inconsistency in Web of Science results has most likely emerged from the different licensing packages at different institutions.To maintain scientific integrity and consistency, especially in systematic reviews, action is needed from both the scientific community and scientific search platforms to increase search consistency. Researchers are encouraged to report the search location and the databases used for systematic reviews, and database providers should make search algorithms transparent and revise access rules to titles behind paywalls. Additional options for increasing the repeatability and transparency of systematic reviews are storing both search metadata and hit results in open repositories and using Application Programming Interfaces (APIs) to retrieve standardized, machine-readable search metadata.

Water for all: Towards an integrated approach to wetland conservation and flood risk reduction in a lowland catchment in Scotland.

Strategies for sustainable water resources management require integration of hydrological, ecological and socio-economic concerns. The "Water for all" project has sought to develop a multi-disciplinary science case for innovative management of water levels and flows in a lowland catchment in Scotland. Water demands of arable agriculture, protection from flood risk and conservation needs of lowland mesotrophic wetlands needed to be considered. Water management strategy focused on the outlet zone of Balgavies lake in Eastern Scotland, where the Lunan Water discharges into a partially confined common channel (lade). Water releases to a mill, to the downstream river, and to floodplain wetlands (Chapel Mires) are partially controlled by an existing weir. Based on observations of management of this weir, we postulated that upgrading hydraulic management in this zone could reduce upstream flood risk, help protect mesotrophic wetlands and facilitate downstream water supply at low flows. We considered potential for: (a) installing a remotely operated tilting weir, for improved management of release and routing of flows from the common lade; (b) dredging of the common lade in combination or instead of the tilting weir. Rapid ecological assessment and mixing analysis of the Lunan Water with waters in Chapel Mires showed a gradient of trophic status across the wetlands linked to impact of river-borne nutrients. Stage-discharge relationships, derived from steady-state approximations of the in-channel hydraulics, showed that the proposed tilting weir had potential to divert seasonal nutrient rich water from the upstream Lake away from Chapel Mires. Significant impact of the proposed weir on upstream flood risk was not demonstrated, but carrying out dredging of the channel reduced the current observed probability of upstream flooding. The proposed weir could help to maintain these dredging benefits. Survey and interviews with catchment stakeholders and residents showed constructive interest in the scheme, with half of the respondents willing to pay to support its implementation. The survey also revealed concerns about the proposed project, especially its long-term governance. The lessons learned have wider relevance to development of an integrated approach to water ecosystem services provision, especially where benefits are uncertain and thinly spread across a range of users.

Is Green Manure from Riparian Buffer Strip Species an Effective Nutrient Source for Crops?

Agriculture needs to reduce inputs of inorganic fertilizers and close the loop on nutrients that can otherwise become environmental pollutants. This can be achieved by promoting recycling of nutrients within the agricultural landscape. We investigated the extent to which plants found in riparian buffer zones have the potential to provide nutrients to crops as a green manure, through plant growth and decomposition studies. Under controlled conditions, species typical of Scottish riparian buffer strips were tested for their ability to accumulate biomass and nutrients in tissue under N- and P-replete conditions and whether this ability enhanced the utility of the resulting green manure in promoting crop growth. In this proof-of-concept study, we found that green manure derived from riparian buffer strips did not effectively replace inorganic fertilizer and only had a significant positive effect on growth, yield, and nutrient accumulation in barley ( L.) when it was integrated with the addition of inorganic fertilizers. The individual species tested varied in the amount of P they accumulated in their tissue (1.38-52.73 mg P plant), but individual species did not differ in their ability to promote yield when used as a green manure. Our results indicate that selecting certain species in the buffer strip on the basis of their nutrient accumulating abilities is not an effective way to increase the utility of buffer strip green manure as a nutrient source for crops.

An Assessment of the Multifunctionality of Integrated Buffer Zones in Northwestern Europe.

Integrated buffer zones (IBZs) have recently been introduced in the Northwestern Europe temperate zone to improve delivery of ecosystem services compared with the services associated with long-established vegetated buffer zones. A common feature of all the studied IBZ sites is that tile drainage, which previously discharged directly into the streams, is now intercepted within the IBZ. Specifically, the design of IBZs combines a pond, where soil particles present in drain water or surface runoff can be deposited, and a planted subsurface flow infiltration zone. Together, these two components should provide an optimum environment for microbial processes and plant uptake of nutrients. Nutrient reduction capacities, biodiversity enhancement, and biomass production functions were assessed with different emphasis across 11 IBZ sites located in Denmark, Great Britain, and Sweden. Despite the small size of the buffer zones (250-800 m) and thus the small proportion of the drained catchment (mostly <1%), these studies cumulatively suggest that IBZs are effective enhancements to traditional buffer zones, as they (i) reduce total N and P loads to small streams and rivers, (ii) act as valuable improved habitats for aquatic and amphibian species, and (iii) offer economic benefits by producing fast-growing wetland plant biomass. Based on our assessment of the pilot sites, guidance is provided on the implementation and management of IBZs within agricultural landscapes.

Species composition of coastal dune vegetation in Scotland has proved resistant to climate change over a third of a century.

Climate change is expected to have an impact on plant communities as increased temperatures are expected to drive individual species' distributions polewards. The results of a revisitation study after c. 34 years of 89 coastal sites in Scotland, UK, were examined to assess the degree of shifts in species composition that could be accounted for by climate change. There was little evidence for either species retreat northwards or for plots to become more dominated by species with a more southern distribution. At a few sites where significant change occurred, the changes were accounted for by the invasion, or in one instance the removal, of woody species. Also, the vegetation types that showed the most sensitivity to change were all early successional types and changes were primarily the result of succession rather than climate-driven changes. Dune vegetation appears resistant to climate change impacts on the vegetation, either as the vegetation is inherently resistant to change, management prevents increased dominance of more southerly species or because of dispersal limitation to geographically isolated sites.

Drivers of carabid functional diversity: abiotic environment, plant functional traits, or plant functional diversity?

Understanding how community assembly is controlled by the balance of abiotic drivers (environment or management) and biotic drivers (community composition of other groups) is important in predicting the response of ecosystems to environmental change. If there are strong links between plant assemblage structure and carabid beetle functional traits and functional diversity, then it is possible to predict the impact of environmental change propagating through different functional and trophic groups. Vegetation and pitfall trap beetle surveys were carried out across twenty four sites contrasting in land use, and hence productivity and disturbance regime. Plant functional traits were very successful at explaining the distribution of carabid functional traits across the habitats studied. Key carabid response traits appeared to be body length and wing type. Carabid functional richness was significantly smaller than expected, indicating strong environmental filtering, modulated by management, soil characteristics, and by plant response traits. Carabid functional divergence was negatively related to plant functional evenness, while carabid functional evenness was positively correlated to plant functional evenness and richness. The study shows that there are clear trait linkages between the plant and the carabid assemblage that act not only through the mean traits displayed, but also via their distribution in trait space; powerful evidence that both the mean and variance of traits in one trophic group structure the assemblage of another.

Investigating riparian margins for vegetation patterns and plant-environment relationships in northeast Scotland.

Buffer strips alongside watercourses are a widely accepted method of reducing nutrient and sediment run-off from agricultural land thereby improving water quality. Little attention, however, has been paid to the ecological status of these areas despite the fact that riparian habitats in good condition can provide multiple benefits. We investigated vegetation patterns and plant-environment relationships within three categories of riparian margins in northeast Scotland. The margins were categorized as unbuffered, buffered, or reference (target), the latter representing the best sites available within the catchments. Vascular plant and soil data were collected from 41 sites along the tributaries of two rivers during 2008 and 2009. Ellenberg indicator values revealed trends of decreasing light availability ( < 0.05) and decreasing pH ( < 0.01) from unbuffered sites to buffered sites to reference sites. Multivariate analysis showed that soil parameters and channel morphology, together with canopy cover and bryophyte abundance, were discriminatory in separating species assemblages. The presence of a tree canopy layer appears to be the key instigator of change in soil conditions and corresponding plant species assemblages. An understanding of the underlying processes is important if vegetation characteristics are to be used effectively as indicators of riparian and water quality and to aid the restoration of riparian habitats.