MABSA: A curated Malayalam aspect based sentiment analysis dataset on movie reviews.

Regional languages are being used more frequently in online platforms as a result of the expanding use of digital technology. Understanding user opinions on social media platforms, forums, blogs, and other digital platforms that employ Indian regional languages has become significant due to their role in various applications. Research on sentiment analysis of Indian regional language texts suffers due to the unavailability of available regional language datasets. The curated Malayalam Aspect Based Sentiment Analysis (MABSA) dataset is a labeled dataset for Aspect Based Sentiment Analysis (ABSA) on the Indian regional language Malayalam over the movie review domain. Malayalam movie reviews, an excellent source of text data for ABSA, are collected from an online survey using Google form and manually collecting reviews from three social media platforms: IMDb, Facebook, and YouTube. Nine target aspects were identified, and three annotators annotated the dataset based on the sentiment polarity of each aspect. A total of 4000 reviews were collected, and a total of 7507 aspects are identified in the reviews. Spearman's correlation and Fleiss Kappa Index are used to analyze the annotated dataset's correlation. It has been found that the high correlation between the annotators implies that the MABSA dataset is of gold standard.

Spatial and seasonal dynamics of the methane cycle in a tropical coastal lagoon and its tributary river.

Coastal aquatic ecosystems such as estuaries and coastal lagoons are important atmospheric methane sources that must be better constrained. This work presents a detailed characterization of the methane cycle in a tropical coastal lagoon (La Mancha, Veracruz, Mexico) and its tributary river over three distinct seasons, along a transect from the river to the sea connection. In addition to several physicochemical parameters, the dissolved methane, carbon dioxide, and oxygen concentrations were measured with high resolution in the sediments and the water column, combined with production/uptake rates. Methane and carbon dioxide cycles were further constrained by determining atmospheric flux over the entire river and lagoon sections. The results indicate that La Mancha is a highly contrasted ecosystem. The river section is characterized by a strong pycnocline, relatively high methane concentration, and active methanogenesis and methanotrophy, discharging into a relatively homogeneous lagoon section where the methane and carbon cycles are less active. Overall, both the river and the lagoon were a net source of methane and carbon dioxide, with an annual emission of 2.9 metric tons of methane and 2757 metric tons of carbon dioxide. The spatial structure of the main components of the methane, carbon dioxide, and oxygen cycles was established, and it was observed that depthwise heterogeneities predominated in the river section. In contrast, lengthwise heterogeneities dominated in the lagoon section.

Treatment of rickets and dyslipidemia in twins with progressive familial intrahepatic cholestasis type 2.

BACKGROUND: Progressive Familial Intrahepatic Cholestasis Type 2 (PFIC2) is a rare congenital cholestatic liver disease that progresses to end stage liver disease. It is associated with fat soluble vitamin D deficiency rickets and severe dyslipidemia; however, treatment of these secondary effects remains a challenge. CASE PRESENTATION: One year old twin males born to a mother with intrahepatic cholestasis during pregnancy presented with jaundice, pruritus and failure to thrive. Lab evaluation revealed significant transaminitis, direct hyperbilirubinemia and normal gamma glutamyl transferase (GGT). Genetic studies confirmed PFIC2. Further evaluation for fat soluble vitamin deficiencies revealed severe vitamin D deficiency rickets. High dose vitamin D replacement therapy using Ergocalciferol (Vitamin D2) 50,000 IU three times a week over 10 weeks led to the improvement of Vitamin D, 25-Hydroxy (25-OH) serum levels and resolution of rickets. Dyslipidemia with very low high density lipoprotein-cholesterol (HDL-C) and high triglycerides was more profound in our patients compared to what has been described in the literature thus far. The dyslipidemia improved 2 months after internal biliary diversion. CONCLUSIONS: Higher doses of Vitamin D therapy are needed for treatment of rickets secondary to cholestasis. Extremely low HDL-C levels are characteristic of PFIC and improve with treatment of underlying cholestasis. Maternal intrahepatic cholestasis during pregnancy can be an early warning sign.

Evaluation of Anticancer and Anti-Mitotic Properties of Quinazoline and Quinazolino-Benzothiadiazine Derivatives.

BACKGROUND: Cancer is one of the major health and social-economic problems despite considerable progress in its early diagnosis and treatment. Owing to the emergence and increase of multidrug resistance to various conventional drugs, and the continuing importance of health-care expenditure, many researchers have focused on developing novel and effective anticancer compounds. OBJECTIVE: Chemical repositories provide a good platform to evaluate and exploit known chemical entities for the identification of other biological activities. In the present study, we have selected an in-house library of synthesized compounds based on two different pharmacophoric scaffolds to evaluate their cytotoxic potency on various cancer cell lines and mechanisms of action. METHODS: A series of in-house synthesized quinazoline and quinazolino-benzothiadiazine derivatives were investigated for their anticancer efficacy against a panel of five cancer (DU145, MCF7, HepG2, SKOV3 and MDA-MB-231) and one normal (MRC5) cell lines. Furthermore, the active compound of the study was investigated to elucidate the mechanism of cytotoxicity by performing series of experiments such as cell cycle analysis, inhibition of tubulin polymerization, alteration of mitochondrial membrane potential, determination of endocytic pathway for drug uptake pathway and combination drug treatment. RESULTS: Among all the tested compounds, fifteen of them exhibited promising growth-inhibitory effect (0.15- 5.0µM) and induced cell cycle arrest in the G2/M phase. In addition, the selected compounds inhibited the microtubule assembly; altered mitochondrial membrane potential and enhanced the levels of caspase-9 in MCF-7 cells. Furthermore, the active compound with a combination of drugs showed a synergistic effect at lower concentrations, and the drug uptake was mediated through clathrin-mediated endocytic pathway. CONCLUSION: Our results indicated that quinazoline and quinazolino-benzothiadiazine conjugates could serve as potential leads in the development of new anticancer agents.

Efficacy of Indolicidin, Cecropin A (1-7)-Melittin (CAMA) and Their Combination Against Biofilm-Forming Multidrug-Resistant Enteroaggregative Escherichia coli.

The present study examined the anti-biofilm efficacy of two short-chain antimicrobial peptides (AMPs), namely, indolicidin and cecropin A (1-7)-melittin (CAMA) against biofilm-forming multidrug-resistant enteroaggregative Escherichia coli (MDR-EAEC) isolates. The typical EAEC isolates re-validated by PCR and confirmed using HEp-2 cell adherence assay was subjected to antibiotic susceptibility testing to confirm its MDR status. The biofilm-forming ability of MDR-EAEC isolates was assessed by Congo red binding, microtitre plate assays and hydrophobicity index; broth microdilution technique was employed to determine minimum inhibitory concentrations (MICs) and minimum biofilm eradication concentrations (MBECs). The obtained MIC and MBEC values for both AMPs were evaluated alone and in combination against MDR-EAEC biofilms using crystal violet (CV) staining and confocal microscopy-based live/dead cell quantification methods. All the three MDR-EAEC strains revealed weak to strong biofilm-forming ability and were found to be electron-donating and weakly electron-accepting (hydrophobicity index). Also, highly significant (P < 0.001) time-dependent hydrodynamic growth of the three MDR-EAEC strains was observed at 48 h of incubation in Dulbecco's modified Eagle's medium (DMEM) containing 0.45% D-glucose. AMPs and their combination were able to inhibit the initial biofilm formation at 24 h and 48 h as evidenced by CV staining and confocal quantification. Further, the application of AMPs (individually and combination) against the preformed MDR-EAEC biofilms resulted in highly significant eradication (P < 0.001) at 24 h post treatment. However, significant differences were not observed between AMP treatments (individually or in combination). The AMPs seem to be an effective candidates for further investigations such as safety, stability and appropriate biofilm-forming MDR-EAEC animal models.

Methane emissions from tree stems: a new frontier in the global carbon cycle.

Tree stems from wetland, floodplain and upland forests can produce and emit methane (CH4 ). Tree CH4 stem emissions have high spatial and temporal variability, but there is no consensus on the biophysical mechanisms that drive stem CH4 production and emissions. Here, we summarize up to 30 opportunities and challenges for stem CH4 emissions research, which, when addressed, will improve estimates of the magnitudes, patterns and drivers of CH4 emissions and trace their potential origin. We identified the need: (1) for both long-term, high-frequency measurements of stem CH4 emissions to understand the fine-scale processes, alongside rapid large-scale measurements designed to understand the variability across individuals, species and ecosystems; (2) to identify microorganisms and biogeochemical pathways associated with CH4 production; and (3) to develop a mechanistic model including passive and active transport of CH4 from the soil-tree-atmosphere continuum. Addressing these challenges will help to constrain the magnitudes and patterns of CH4 emissions, and allow for the integration of pathways and mechanisms of CH4 production and emissions into process-based models. These advances will facilitate the upscaling of stem CH4 emissions to the ecosystem level and quantify the role of stem CH4 emissions for the local to global CH4 budget.

A comparative study for detection of extended spectrum ß-lactamase (ESBL) production by Enteroaggregative Escherichia coli (EAEC) strains using double disc, nitrocefin and PCR assays.

We explored and evaluated for the first time colorimetric nitrocefin assay in conjunction with the double disc test and PCR assay. We suggested the use of nitrocefin assay for rapid screening of ESBL-production by Enteroaggregative Escherichia coli.

Erratum: Large emissions from floodplain trees close the Amazon methane budget.

This corrects the article DOI: 10.1038/nature24639.

Large emissions from floodplain trees close the Amazon methane budget.

Wetlands are the largest global source of atmospheric methane (CH4), a potent greenhouse gas. However, methane emission inventories from the Amazon floodplain, the largest natural geographic source of CH4 in the tropics, consistently underestimate the atmospheric burden of CH4 determined via remote sensing and inversion modelling, pointing to a major gap in our understanding of the contribution of these ecosystems to CH4 emissions. Here we report CH4 fluxes from the stems of 2,357 individual Amazonian floodplain trees from 13 locations across the central Amazon basin. We find that escape of soil gas through wetland trees is the dominant source of regional CH4 emissions. Methane fluxes from Amazon tree stems were up to 200 times larger than emissions reported for temperate wet forests and tropical peat swamp forests, representing the largest non-ebullitive wetland fluxes observed. Emissions from trees had an average stable carbon isotope value (δ13C) of -66.2 ± 6.4 per mil, consistent with a soil biogenic origin. We estimate that floodplain trees emit 15.1 ± 1.8 to 21.2 ± 2.5 teragrams of CH4 a year, in addition to the 20.5 ± 5.3 teragrams a year emitted regionally from other sources. Furthermore, we provide a 'top-down' regional estimate of CH4 emissions of 42.7 ± 5.6 teragrams of CH4 a year for the Amazon basin, based on regular vertical lower-troposphere CH4 profiles covering the period 2010-2013. We find close agreement between our 'top-down' and combined 'bottom-up' estimates, indicating that large CH4 emissions from trees adapted to permanent or seasonal inundation can account for the emission source that is required to close the Amazon CH4 budget. Our findings demonstrate the importance of tree stem surfaces in mediating approximately half of all wetland CH4 emissions in the Amazon floodplain, a region that represents up to one-third of the global wetland CH4 source when trees are combined with other emission sources.

The contribution of trees to ecosystem methane emissions in a temperate forested wetland.

Wetland-adapted trees are known to transport soil-produced methane (CH4 ), an important greenhouse gas to the atmosphere, yet seasonal variations and controls on the magnitude of tree-mediated CH4 emissions remain unknown for mature forests. We examined the spatial and temporal variability in stem CH4 emissions in situ and their controls in two wetland-adapted tree species (Alnus glutinosa and Betula pubescens) located in a temperate forested wetland. Soil and herbaceous plant-mediated CH4 emissions from hollows and hummocks also were measured, thus enabling an estimate of contributions from each pathway to total ecosystem flux. Stem CH4 emissions varied significantly between the two tree species, with Alnus glutinosa displaying minimal seasonal variations, while substantial seasonal variations were observed in Betula pubescens. Trees from each species emitted similar quantities of CH4 from their stems regardless of whether they were situated in hollows or hummocks. Soil temperature and pore-water CH4 concentrations best explained annual variability in stem emissions, while wood-specific density and pore-water CH4 concentrations best accounted for between-species variations in stem CH4 emission. Our study demonstrates that tree-mediated CH4 emissions contribute up to 27% of seasonal ecosystem CH4 flux in temperate forested wetland, with the largest relative contributions occurring in spring and winter. Tree-mediated CH4 emissions currently are not included in trace gas budgets of forested wetland. Further work is required to quantify and integrate this transport pathway into CH4 inventories and process-based models.

CDC Kerala 2: Developmental intervention package for babies <1,800 g--outcome at 6 mo using DASII.

OBJECTIVES: To describe the experience of using developmental intervention package among low birth weight babies less than 1,800 g and developmental outcome at the end of 6 mo monthly intervention. METHODS: Babies below 1,800 g, discharged from neonatal intensive care unit (NICU) of Sree Avittom Thirunal (SAT) hospital, over the last 3 y, were followed at Child Development Centre (CDC) Kerala and offered monthly evaluation by different tools and developmental intervention using a package by trained developmental therapists and mothers were encouraged to continue the same at home. At the end of 6 mo the developmental outcome was assessed using Developmental Assessment Scale for Indian Infants (DASII). RESULTS: Out of a total of 821 babies enrolled for early stimulation program, 740 babies successfully completed 6 mo follow up and stimulation program. Comparing the outcome at 4 and 6 mo, both grading for head holding and gross motor part of DDST showed a statistically significant reduction in abnormal findings. At 6 mo assessment on DASII, motor DQ abnormalities were a high 80% for 600-900 g, as against 17.1% abnormalities for 1,500-1,800 g birth weight group. CONCLUSIONS: The results of this intensive early stimulation program for babies below 1,800 g have shown the importance of monthly early intervention using a mother oriented systematic developmental stimulation package.

Controls on methane emissions from Alnus glutinosa saplings.

Recent studies have confirmed significant tree-mediated methane emissions in wetlands; however, conditions and processes controlling such emissions are unclear. Here we identify factors that control the emission of methane from Alnus glutinosa. Methane fluxes from the soil surface, tree stem surfaces, leaf surfaces and whole mesocosms, pore water methane concentrations and physiological factors (assimilation rate, stomatal conductance and transpiration) were measured from 4-yr old A. glutinosa trees grown under two artificially controlled water-table positions. Up to 64% of methane emitted from the high water-table mesocosms was transported to the atmosphere through A. glutinosa. Stem emissions from 2 to 22 cm above the soil surface accounted for up to 42% of total tree-mediated methane emissions. Methane emissions were not detected from leaves and no relationship existed between leaf surface area and rates of tree-mediated methane emissions. Tree stem methane flux strength was controlled by the amount of methane dissolved in pore water and the density of stem lenticels. Our data show that stem surfaces dominate methane egress from A. glutinosa, suggesting that leaf area index is not a suitable approach for scaling tree-mediated methane emissions from all types of forested wetland.

Trees are major conduits for methane egress from tropical forested wetlands.

Wetlands are the largest source of methane to the atmosphere, with tropical wetlands comprising the most significant global wetland source component. The stems of some wetland-adapted tree species are known to facilitate egress of methane from anoxic soil, but current ground-based flux chamber methods for determining methane inventories in forested wetlands neglect this emission pathway, and consequently, the contribution of tree-mediated emissions to total ecosystem methane flux remains unknown. In this study, we quantify in situ methane emissions from tree stems, peatland surfaces (ponded hollows and hummocks) and root-aerating pneumatophores in a tropical forested peatland in Southeast Asia. We show that tree stems emit substantially more methane than peat surfaces, accounting for 62-87% of total ecosystem methane flux. Tree stem flux strength was controlled by the stem diameter, wood specific density and the amount of methane dissolved in pore water. Our findings highlight the need to integrate this emission pathway in both field studies and models if wetland methane fluxes are to be characterized accurately in global methane budgets, and the discrepancies that exist between field-based flux inventories and top-down estimates of methane emissions from tropical areas are to be reconciled.

A panchayat level primary-care approach for adolescent services.

OBJECTIVE: To develop a model for providing community adolescent care services in the primary care setting METHODS: Need assessment was done among adolescents and perceived problems of adolescents were studied using qualitative and quantitative methods. Based on the results of these studies, a Family Life Education (FLE) module was prepared. Awareness programs were organized for all stakeholders in the community on adolescent issues. All anganwadi workers in the panchayat were trained to take interactive sessions for all the adolescents in the panchayat using the FLE module. Ward based Teen Clubs were formed in all the 13 wards of the Panchayat separately for boys and girls and FLE classes were given to them through anganwadi workers. An Adolescent Clinic was set up to provide necessary medical and counseling facilities. Adolescent Health Card was distributed to all Teen Club members and those who attended the adolescent clinics. RESULTS: The present approach stresses the need and feasibility of adolescent-centered, community-based interventions. The authors' experience showed that before starting any adolescent program, community awareness generation about the need and content of the program is very important for its success. The experience of this model has made it possible to up-scale the program to seven districts of southern Kerala as a service model. CONCLUSIONS: The experiences of the program gave a realistic picture of the needs and problems of adolescents and a simple feasible model for providing services to adolescents in the primary care setting that can be easily replicated in other parts of India.

Characterization of two Indian native chicken breeds for production, egg and semen quality, and welfare traits.

The present study was conducted to characterize 2 important native chicken breeds from India and compare them on growth, production, egg and semen quality, and welfare traits. The Aseel breed showed (P < 0.001) higher BW at different ages; higher shank, radius, and toe lengths at 40 wk of age; and greater egg weights at 28, 32, and 40 wk of age than did the Kadaknath breed. The Kadaknath breed reached sexual maturity at an early age, and it had higher 40-wk egg production (P < 0.001). Higher egg specific gravity (P < 0.05) and higher albumen (P < 0.001) and shell (P < 0.009) percentages in the Kadaknath were observed, whereas the Aseel breed had a higher yolk index (P < 0.004), higher yolk percentage (P < 0.001), and higher yolk-to-albumen ratio (P < 0.001). Concentration of sperm (P < 0.01), live sperm counts (P < 0.05), and semen appearance scores (P < 0.05) were higher in the Aseel breed than in the Kadaknath breed. The Aseel breed showed a greater incidence of feather-pecking behavior under floor rearing, and this was negligible or mild in the Kadaknath breed. Broodiness under cage rearing was observed (8.42%) in the Aseel breed. With regard to welfare traits, male Aseel birds had a significantly shorter (P < 0.05) duration of tonic immobility (TI) than did male Kadaknath birds. Furthermore, male Aseel birds had a shorter (P < 0.001) duration of TI than did female Aseel birds, whereas female Aseel birds had a longer (P < 0.05) duration of TI than did female and male Kadaknath birds. From this study, it was concluded that the breeds differed on various growth, production, egg and semen quality, and behavioral traits, but not on welfare traits, although female Aseel birds exhibited a greater fear response.

Mitigation of methane emissions from constructed farm wetlands.

Constructed wetlands are increasingly used for water pollution treatment but may also be sources of the greenhouse gas CH(4). The effect of addition of two potential inhibitors of methanogenesis - iron ochre and gypsum - on net CH(4) emissions was investigated in a constructed wetland treating farm runoff in Scotland, UK. CH(4) fluxes from three 15-m(2) wetland plots were measured between January and July 2008 in large static chambers incorporating a tunable diode laser, with application of 5tonha(-1) ochre and gypsum in May. CH(4) fluxes were also measured from control and ochre- and gypsum-treated wetland sediment cores incubated at constant and varying temperature in the laboratory. Ochre addition suppressed CH(4) emissions by 64+/-13% in the field plot and >90% in laboratory incubations compared to controls. Gypsum application of 5tonha(-1) in the field and laboratory experiments had no effect on CH(4) emissions, but application of 10tonha(-1) to a sediment core reduced CH(4) emissions by 28%. Suppression of CH(4) emissions by ochre application to sediment cores also increased with temperature; the reduction relative to the control increased from 50% at 17.5 degrees C to >90% at 27.5 degrees C. No significant changes in N removal or pH and potentially-toxic metal content of sediments as the result of inhibitor application were detected in the wetland during the study.

Validation of Home Screening Questionnaire (HSQ) against Home Observation for the Measurement of Environment (HOME).

This study was done to validate the screening tool Home Screening Questionnaire (HSQ) against the gold standard Home Observation for the Measurement of Environment (HOME) inventory, using diagnostic test evaluation. Both HOME inventory and HSQ were administered by separate observers, with children less than 3 years of age, among 200 families belonging to 14 anganwadi areas. There was a high sensitivity of 83 and a high specificity of 82 observed for a cutoff point of less than or equal to 19 on HSQ against HOME Inventory as Gold Standard, as was also observed in the Receiver Operating Characteristic (ROC) curve. The likelihood ratio (LR) for positive test was 4.6 (95 % CI, 3.3 to 6.9) which implies that the families with poor home environment are 4.6 times more likely to have the HSQ score less than or equal to 19 as compared to normal families. The results of this study imply that we can confidently apply the HSQ in developmental evaluation clinics and reserve HOME inventory for research purposes.

Developmental delay and disability among under--5 children in a rural ICDS block.

We conducted this study to assess the prevalence of developmental delay, deformity and disability among 0-5 age group childrenn in Pattanakkad rural ICDS block, selected at random from among the ICDS blocks in Alappuzha District, Kerala, India. Of 12520 children upto 5 years in this block, there were a total of 311 children with developmental delay, deviation, deformity or disability giving a prevalence of 2.5 % (95 % CI, 2.22 to 2.77). The prevalence of developmental disabilities up to 2 years was 2.31 (95 % CI, 1.91 to .71) and from 2 to 5 years 2.62 % (95 % CI, 2.25 to 2.99). The prevalence obtained in the study has important policy implications for identifying childhood disabilities in the community.

Neuropsychiatric manifestations systemic lupus erythematosus: a study from South India.

CONTEXT: Neuropsychiatric systemic lupus erythematosus (NPSLE) has varied manifestations. AIMS: To study the pattern of neuropsychiatric (NP) involvement in systemic lupus erythematosus (SLE). SETTINGS AND DESIGN: Hospital based cross sectional and retrospective study. PATIENTS AND METHODS: Patients admitted with a diagnosis of SLE, during a period of 16 months, were evaluated and any NP syndrome present classified as per the American College of Rheumatology (ACR) nomenclature. STATISTICAL ANALYSIS: SPSS software Version 10 was used for descriptive analysis and correlative study. RESULTS: Out of 50 patients with SLE, all the patients with NPSLE [39 (78%)] were females, mean age 25.66 years (range: 11-44). The commonest manifestation was headache [20 (55.6%)]. Seizures were seen in 8 (20.51%) and psychosis in 6 (16.2%). Fine distal tremor was seen in 8 (20.51%) of patients. CONCLUSIONS: Headache is a frequent NP syndrome. Fine distal tremor is a syndrome not included in ACR classification but seen is 20% of our patients with NPSLE.