Identification of a novel genomic variance of BRAF1 in papillary thyroid carcinoma: A case report.

RATIONALE: Papillary thyroid carcinoma (PTC), the predominant subtypes accounting for approximately 85% of thyroid carcinomas, has a rapidly increasing global incidence rate. Statistically, approximately 74.6% PTC patients had the genomic variants of BRAF, especially BRAFV600E mutation, which has been reported to stratify patients and guide clinic-therapies. However, some PTC patients may carry other nonclassical mutation patterns of BRAF, due to the complex of genomic instability. And the spectrum of BRAF mutation was not fully characterized. We reported a novel BRAF mutation pattern of PTC. PATIENT CONCERNS: A 59-year-old woman was admitted to our hospital because of the slight enlargement of bilateral cervical lymph nodes in July 2023. DIAGNOSIS: Ultrasonography revealed that the bilateral thyroid nodules of the patients both presented 1 hypoechoic nodule, which was graded as 3 of the elastic score, and the small calcification in the right lobe (Chinese-Thyroid Imaging Reporting and Data System 4c). Pathological diagnosis showed the interstitial collagen change and focal follicular epithelial papillary hyperplasia with atypical hyperplasia of the bilateral thyroid. Further puncture pathology showed that the patient had a malignant thyroid lesion with the phenotypes of papillary carcinoma and diagnosed with malignancy subsequently. Additionally, the patient harbored a novel insert on BRAF exon 15, a 6-base fragment AGACAG inserting between c.1798 and c.1799. INTERVENTIONS: The patient was undergone on microwave ablation of thyroid carcinoma on July 28, 2023. After the surgery, the patient was treated on anti-infection, cold saline external application of bilateral thyroid swelling supportive treatment. OUTCOMES: No postoperative complications or recurrence and metastasis were found. LESSONS: This is the first case of the novel nonclassical genomic variant of BRAF. Our study extends the spectrum of BRAF mutations. The patient had a favorable response to microwave ablation, indicating that in spite of the association between this mutation and high-grade malignant phenotype, this genomic variant of BRAF did not have a detrimental effect on the response of clinical treatment.

Electric field applications enhance the electron transfer capacity of dissolved organic matter in sludge compost.

Dissolved organic matter (DOM) plays an important role in heavy metal passivation and organic pollutant degradation owing to its redox ability. The structure and composition of DOM are determinants of redox ability changes during composting. Electric field-assisted aerobic composting (EAAC) has been shown to promote the degradation and humification of organic matter in compost. However, how EAAC affects the redox ability of DOM remains unclear. Hence, electron transfer capacity (ETC) of DOM extracted from EAAC was studied using the electrochemical method. Various spectral methods, such as excitation-emission matrix and ultraviolet and visible spectrophotometry were used to study the relationship of ETC with the compositional and structural changes of DOM. Results indicated that EAAC enhanced ETC of DOM at the later stage of composting, and ETC of DOM extracted from the final EAAC product was 10.4% higher than that of the control group. Spectral and correlation analyses showed that EAAC resulted in structural and compositional changes of DOM, and humification degree, aromatic compounds, molecular weight, and fulvic- and humic-like substance contents were improved in EAAC. This conversion increased ETC of DOM. Results of this study will contribute to the understanding of the redox of DOM and in expanding the application of EAAC products.

Effect of ventilation quantity on electron transfer capacity and spectral characteristics of humic substances during sludge composting.

Humic substances (HSs) can ameliorate soil pollution by mediating electron transfer between microorganisms and contaminants. This capability depends on the redox-active functional structure and electron transfer capacity (ETC) of HS. This study mainly aimed to analyze the effects of different ventilation quantities on the ETC and spectral characteristics of HS (including humic acids (HAs) and fulvic acids (FAs)) during sludge composting. HS was extracted from compost with different ventilation quantities (0.1, 0.2, and 0.3 L kg-1 dry matter min-1, denoted as VQ1, VQ2, and VQ3, respectively). The ETC of HS was measured by electrochemical method. Excitation-emission matrix (EEM) spectroscopy, ultraviolet and visible (UV-Vis) spectrophotometry, and Fourier transform infrared (FT-IR) spectroscopy were conducted to understand the evolution of HS composition during composting. Results indicated that the ETC of HA and FA increased during composting, and VQ2 had stronger ETC and electron recycling rate than VQ1 and VQ3 at the end of composting. UV-Vis analysis revealed that the humification degree, aromatization degree, and molecular weight of HA and FA increased during composting, while the content of lignin decreased. EEM-PARAFAC results suggested that VQ2 accelerated the degradation of protein-like substances. FT-IR revealed a decrease trend in polysaccharide and aliphatic, and the carboxyl content increased in VQ2 and VQ3 while decreased in VQ1. Correlation analysis was used to study the relationship between HS components and ETC. The results advance our further understanding of the pollution remediation mechanism of HS.

Enhanced removal of antibiotic resistance genes and mobile genetic elements during sewage sludge composting covered with a semi-permeable membrane.

Transmission of antibiotic resistance genes (ARGs) via air media, such as particulate matter, has been intensively investigated due to human exposure through inhalation. However, whether particulate matter originating from the atmospheric environment of composting plants can impact ARG abundance during composting is unknown. Here, we investigated the effects of the atmospheric environment of composting plants on ARG abundance during sewage sludge composting using semi-permeable membrane-covered thermophilic composting (smTC) and conventional thermophilic composting (cTC). After smTC treatment, the total abundances of ARGs and mobile genetic elements (MGEs) decreased by 42.1 % and 38.1 % compared with those of the initial phase, respectively, but they increased by 4.5- and 1.6-fold after cTC, respectively. This result suggested that smTC was more efficient at decreasing ARGs and MGEs than cTC, mainly due to a significant reduction in bacterial contamination from the atmospheric environment of composting plants that accelerated the resurgence of ARGs and MGEs. Furthermore, culture experiments demonstrated that the abundance and diversity of antibiotic-resistant bacteria during the mature phase of smTC were also significantly (P <  0.05) lower than those in the cTC treatment. Thus, covering composting with a semi-permeable membrane could decrease the risk of ARGs spreading.