A novel nematode species from the Siberian permafrost shares adaptive mechanisms for cryptobiotic survival with C. elegans dauer larva.

Some organisms in nature have developed the ability to enter a state of suspended metabolism called cryptobiosis when environmental conditions are unfavorable. This state-transition requires execution of a combination of genetic and biochemical pathways that enable the organism to survive for prolonged periods. Recently, nematode individuals have been reanimated from Siberian permafrost after remaining in cryptobiosis. Preliminary analysis indicates that these nematodes belong to the genera Panagrolaimus and Plectus. Here, we present precise radiocarbon dating indicating that the Panagrolaimus individuals have remained in cryptobiosis since the late Pleistocene (~46,000 years). Phylogenetic inference based on our genome assembly and a detailed morphological analysis demonstrate that they belong to an undescribed species, which we named Panagrolaimus kolymaensis. Comparative genome analysis revealed that the molecular toolkit for cryptobiosis in P. kolymaensis and in C. elegans is partly orthologous. We show that biochemical mechanisms employed by these two species to survive desiccation and freezing under laboratory conditions are similar. Our experimental evidence also reveals that C. elegans dauer larvae can remain viable for longer periods in suspended animation than previously reported. Altogether, our findings demonstrate that nematodes evolved mechanisms potentially allowing them to suspend life over geological time scales.

Onyx disparamphis sp. n. (Nematoda, Desmodorida) from South Korea with a taxonomic review of the genus.

A new free-living marine nematode Onyx disparamphis sp. n. (Nematoda, Desmodorida) is described from sandy littoral of Jeju Island, South Korea. The new species differs from all other Onyx species by the unusual amphideal fovea morphology in males (elongated loop). O. disparamphis relates to O. balochinensis, and O. brevispiculatum by having simple non-double terminal pharyngeal bulb and relatively small and straight, non-sigmoid supplementary organs, but differs from them by smaller body length, shorter cephalic setae, smaller terminal pharyngeal bulb, smaller spicules, number of supplementary organs and tail shape expressed as ratio tail length/anal diameter. The genus Onyx is revised with updated genus diagnosis, and an annotated list of 23 valid species is presented. Onyx ferox is considered species inquirenda because the species is known only from a sole immature female specimen, while within Onyx, the males provide the most important distinguishing characters such as enlarged and complicated amphids, supplementary organs and copulatory spicules. For species identification, a pictorial key consisting of illustrations of simplified icons of male heads and posterior body sections, as well as a table of the most important morphometric and numerical characters are provided. Geographical distribution and habitat specifity of Onyx species is analysed briefly.

What is the difference between marine and limnetic-terrestrial associations of nematodes with invertebrates?

Zoo- and phyto-parasitic nematodes of the order Rhabditida and zooparasites of the subclass Dorylaimia are well known, due largely to their medical, veterinarian and agricultural significance. However, there have been many switches from a free-living to a symbiotic (including parasitism) mode of existence in the evolutionary trajectories of various nematode clades. Here, we attempt to summarize all known cases of symbioses (from commensalism to true parasitism) between marine nematodes representing nonparasitic taxa and various larger animals, ranging from protists to vertebrates. Most cases are of nematodes relating to dwelling on crustaceans (ectocommensalism) or living in the body cavity and internal organs of various invertebrates (endoparasitism or parasitoidism). Ectocommensal species may differ from their free-living relatives in their longer filiform bodies and enlarged ventral and caudal glands, which may be interpreted as adaptations for the purpose of fixation on the body surface of a motile host. Endoparasitic species are characterized by deep anatomical modification, including rudimentation of the alimentary tract and hypertrophy of reproductive organs. Unlike terrestrial and limnetic invertebrates, marine invertebrates have almost no intestinal nematode dwellers. The evolutionary trajectories of nematode dwellers of marine and nonmarine invertebrates are compared.

Two species of Thoracostomopsidae (Nematoda: Enoplida) from Jeju Island, South Korea.

During a survey of intertidal zones at beaches on Jeju Island, two species belonging to the family Thoracostomopsidae were discovered. One new species, Enoploides koreanus sp. nov. and one known species, Epacanthion hirsutum Shi & Xu, 2016 are reported. Along with morphological analysis, mitochondrial cytochrome oxidase c subunit 1 (mtCOI) sequences and 18S rRNA sequences of the species were also obtained and used to check relative p-distance and phylogenetic positions. While most species of Enoploides have long spicules, the new species belongs to a group of Enoploides with short spicules < 150 µm). Of the seven species with short spicules, the new species is most closely related to E. disparilis Sergeeva, 1974. They both have similar body length, fairly similar sized and shaped spicules with small gubernaculum running parallel to distal end of spicule, and an index value of b. The new species can be distinguished from E. disparilis by having pre-anal supplementary organ with short conical tail, while E. disparilis lacks pre-anal supplementary organ and has a long conico-cylindrical tail. Along with the description of the new species, the genus Enoploides Ssaweljev, 1912 is bibliographically reviewed and revised. Of 45 species described to date, 27 are now considered valid, 16 species inquirendae due to inadequate descriptions and ambiguity of the material examined, along with two cases of nomen nudum. With this review, we provide an updated diagnosis and list of valid species, a tabular key comparing diagnostic characters of all valid species, and a new complete key to species. One known species, Epacanthion hirsutum Shi & Xu, 2016, is reported in Korea for the first time. The morphology agrees well with the original description provided by Shi & Xu, 2016. As they had already reviewed the genus at the time of reporting four Epacanthion species, we provide only a description, depiction, and measurements for comparison purposes.

A new species of the genus Thalassironus (Nematoda: Enoplida: Ironidae) from the coasts of South Korea.

A new species of the genus Thalassironus de Man, 1889 was discovered during several surveys of the offshore marine ecosystem in Korea. This new species belonging to the family Ironidae, Thalassironus koreanus sp. nov., shares general morphological traits of the genus such as an optically smooth cuticle, buccal cavity consisting of two parts with three movable teeth and thick cuticularized walls, six rounded lips with ten cephalic setae, slit-like amphid and short conical tail with caudal glands present. The new species is most closely related to T. bohaiensis, first discovered in the Bohai Sea, in terms of body ratio (a, b, c, c') and general morphology, but differs by its generally longer and larger body structures, cervical setae at the level of the buccal cavity, paired somatic setae distributed along the body, and longer/larger spicule. A description of Thalassironus koreanus sp. nov., diagnosis of the genus, emended pictorial key for the genus and discussion of important characteristics for the genus is provided.

Bibliographic revision of Mesacanthion Filipjev, 1927 (Nematoda: Thoracostomopsidae) with description of a new species from Jeju Island, South Korea.

A new species of the genus Mesacanthion Filipjev, 1927 was discovered during a survey of natural beaches of Jeju Island in South Korea. The new species Mesacanthion jejuensis sp. nov. shares general morphology of the genus such as the outer labial and cephalic setae being situated at the middle of cephalic capsule, well-developed mandibles with two columns united by a curved bar, and three equally sized and shaped teeth shorter than the mandibles. The new species belongs to a group of Mesacanthion species in which spicules are shorter than two anal body diameters. The new species is most closely related to M. pannosum, first discovered in Puget Sound, Washington, in terms of having enlarged cervical setae flap at the end of cephalic capsule, spicules which are shorter than 2 anal body diameter, both supplementary organ and gubernaculum. It can be distinguished from M. pannosum by its stronger inner labial setae, longer outer labial setae, and difference in the index value of b and c'. Along with the description of Mesacanthion jejuensis sp. nov., the genus Mesacanthion Filipjev, 1927 is bibliographically reviewed and revised. Including the new species, a total of 48 species are described within the genus; 39 which are valid; eight which are considered to be species inquirenda due to misplacement of genus and poor description; one which is considered nomen nudum. An updated diagnosis of the genus is provided along with a compiled tabular key comparing different diagnostic morphological characters of all valid species, as well as a pictorial key consisting of 21 species with spicules shorter than two anal body diameters.

Revision of Cervonema Wieser, 1954 and Laimella Cobb, 1920 (Nematoda: Comesomatidae) with descriptions of two species from East Sea, Korea.

One new and one known species of the family Comesomatidae Filiepjev, 1918 were collected from marine sediments in the East Sea, Korea. Cervonema donghaensis sp. nov. is related to C. proximamphidum Tchesunov, 2000 and C. chilensis Chen & Vincx, 2000 but differs from them by the presence of the gubernaculum and by having outer labial setae and cephalic setae of unequal length. It differs from C. proximamphidum by having a rather shorter tail and the shape of the posterior widening of the pharynx, which has distinct muscular striation. Cervonema donghaensis sp. nov. differs from C. chilensis in body length, higher de Man's ratio c, and having a shorter cylindrical portion of the tail. Cervonema deltensis Hope & Zhang 1995 is considered as a junior synonym of C. tenuicauda (Schuurmans Stekhoven, 1950) Wieser, 1954. Specimens of Laimella filipjevi Jensen, 1979 from East Sea, Korea largely agree with the original description of Jensen (1979) of nematodes from the Western Baltic Sea, except for slight differences in length of cephalic setae and spicules. It also coincides well with the redescription of L. filipjevi by Tchesunov (2000) based on specimens from the White Sea. Pictorial keys for the identification of valid species in the genera Cervonema Wieser, 1954 and Laimella Cobb, 1920 are given.

Two known and one new species of Draconematidae and Epsilonematida (Nematoda, Desmodorida) from the White Sea, North Russia.

Morphological descriptions of three "walking nematode" species found for the first time in the White Sea are presented. Draconema ophicephalum (Claparède, 1863) (Draconematidae) and Epsilonema steineri Chitwood, 1935 (Epsilonematidae), both known from insufficient material and females only, are re-described and problems of their taxonomic identification as well as species compositions of respective genera are discussed. The new species Prochaetosoma marisalbi sp. n. (Draconematidae) differs from other Prochaetosoma species except P. longicapitatum (Allgén, 1935) in that the pharyngeal bulb lumen is not cuticularised, from P. longicapitatum by shape of body and rostrum, greater number of cephalic adhesive tubes, and from P. maertensi Decraemer, 1989 by having a relatively longer tail, fewer anterior adhesive tubes and longer spicules, besides lacking cuticular thickening in the pharyngeal bulb. Draconema hoonsooi, D. youngeouni, P.rochaetosoma beomseomense, P. brevicaudatum, P. byungilli, P. cracense, P. saheungi, P. sujungi, P. supseomense erected by Rho & Min (2011) are considered as invalid species while Prochaetosoma arcticum, P. lugubre and Epsilonema cygnoides are assumed as species inquirenda. From a phylogenetic tree based on the 18S rRNA gene, all three White Sea species adjoin to unidentified species of their respective genera.

A review of the genus Litinium Cobb, 1920 (Nematoda: Enoplida: Oxystominidae) with descriptions of four new species from two contrasting habitats.

Four new species of the genus Litinium are described from mangroves and from deep sea. The genus Litinium now includes ten valid species. An emended generic diagnosis and a pictorial guide for species identification are given. Litinium quangi sp. n. and L. curticauda sp. n., both found in mangroves of South Vietnam, are morphologically similar and differ from other congeneric species in body size, having short anterior setae, ovoid amphideal fovea and a short rounded tail. Litinium quangi differs from L. curticauda in the number of midventral preanal supplementary setae (one in L. quangi and two in L. curticauda) and relative tail length (c' 1.12-1.63 in L. quangi and 0.83-0.94 in L. curticauda). Litinium abyssorum sp. n. and L. profundorum sp. n., both collected from the Angola Basin, South-East Atlantic Ocean, at depth 5400 m, are also morphologically similar and differ from other species of the genus by having a smaller body and relatively large amphideal fovea with deep invagination of the anterior edge. Litinium abyssorum differs from L. profundorum in the number of midventral preanal setae (two in L. abyssorum, one in L. profundorum), relative tail length (c' 3.61 in L. abyssorum and 1.17 in L. profundorum) and L. abyssorum has unequal spicules.

Meiofauna in the Gollum Channels and the Whittard Canyon, Celtic Margin--how local environmental conditions shape nematode structure and function.

The Gollum Channels and Whittard Canyon (NE Atlantic) are two areas that receive high input of organic matter and phytodetritus from euphotic layers, but they are typified by different trophic and hydrodynamic conditions. Sediment biogeochemistry was analysed in conjunction with structure and diversity of the nematode community and differences were tested between study areas, water depths (700 m vs 1000 m), stations, and sediment layers. The Gollum Channels and Whittard Canyon harboured high meiofauna abundances (1054-1426 ind. 10 cm(-2)) and high nematode diversity (total of 181 genera). Next to enhanced meiofauna abundance and nematode biomass, there were signs of high levels of organic matter deposition leading to reduced sedimentary conditions, which in turn structured the nematode community. Striking in this respect was the presence of large numbers of 'chemosynthetic' Astomonema nematodes (Astomonema southwardorum, Order Monhysterida, Family Siphonolaimidae). This genus lacks a mouth, buccal cavity and pharynx and possesses a rudimentary gut containing internal, symbiotic prokaryotes which have been recognised as sulphur-oxidising bacteria. Dominance of Astomonema may indicate the presence of reduced environments in the study areas, which is partially confirmed by the local biogeochemical environment. The nematode communities were mostly affected by sediment layer differences and concomitant trophic conditions rather than other spatial gradients related to study area, water depth or station differences, pointing to small-scale heterogeneity as the main source of variation in nematode structure and function. Furthermore, the positive relation between nematode standing stocks, and quantity and quality of the organic matter was stronger when hydrodynamic disturbance was greater. Analogically, this study also suggests that structural diversity can be positively correlated with trophic conditions and that this relation is tighter when hydrodynamic disturbance is greater.