Gamma irradiation of clove: level of trapped radicals and effects on bioactive composition.

BACKGROUND: Food irradiation is a widely used technique for improving the safety and shelf life of foods, including most spices. However, growing concerns by consumers about this technique require further investigation on the effects of radiation, both on the safety of the food and on its organoleptic properties. In this work, cloves of diverse origins were submitted to different irradiation doses in a 60 Co source. The presence of trapped radicals and their time-dependent decay after irradiation were assessed by electron spin resonance (ESR) spectroscopy. The volatile bioactive composition and the clove oil were evaluated before and after irradiation by gas chromatography time-of-flight mass spectrometry. RESULTS: Results show an increase of the amount of volatiles collected after irradiation, especially of caryophyllene oxide and acetic acid, although these are still minor constituents. No new compound was detected after irradiation. Radicals decay fast, and 60 days after irradiation they were undetectable by ESR. CONCLUSION: Gamma irradiation showed to be a clean technique for clove decontamination, since no significant change in the aroma or oil compositions was found, and low levels of trapped paramagnetic species, after the initial decay period, were detected upon irradiation. Furthermore, irradiation doses higher than those legally allowed are equally safe. © 2018 Society of Chemical Industry.

The first-line antiepileptic drug carbamazepine: Reaction with biologically relevant free radicals.

Carbamazepine (CBZ) is one of the most widely used antiepileptic drugs by both adults and children. Despite its widespread use, CBZ is associated with central nervous system toxicity and severe hypersensitivity reactions, which raise concerns about its chronic use. While the precise mechanisms of CBZ-induced adverse events are still unclear, metabolic activation to the epoxide (CBZ-EP) has been thought to play a significant role. This work reports first-hand evidence that CBZ reacts readily with biologically relevant thiyl radicals with no need for bioactivation. Using liquid chromatography coupled with high resolution mass spectrometry, multiple products from direct reaction of CBZ with glutathione (GSH) and N-acetyl-L-cysteine (NAC) were unequivocally identified, including the same product obtained upon ring-opening of CBZ-EP. The product profile is complex and consistent with radical-mediated mechanisms. Importantly, side products and adducts compatible with this non-enzymatic pathway were identified in liver extracts from CBZ-treated Wistar rats. The reaction of CBZ with GSH and NAC is more extensive in the presence of oxygen. Taking into consideration that GSH conjugation is, in general, a detoxification pathway, these results suggest that under hyperoxia/oxidative stress conditions the bioavailability of the parent drug may be compromised. Additionally, this non-enzymatic process can be anticipated to play, at least in part, a role in the onset of CBZ-induced adverse reactions due to the concomitant generation of reactive oxygen species. Therefore, the search for causal relationships between the formation of non-enzymatically-driven CBZ products and the occurrence of CBZ-induced adverse events in human patients merits further research, aiming the translation of basic mechanistic findings into a clinical context that may ultimately lead to a safer CBZ prescription.

Bis(dioxaborine) Dyes with Variable π-Bridges: Towards Two-Photon Absorbing Fluorophores with Very High Brightness.

Bis(dioxaborine) dyes of the A-π-A format (A: acceptor, π: conjugated bridge) were prepared and photophysically characterized. The best performing dyes feature (a) visible-light absorption (>400 nm), (b) high molar absorption coefficients (up to 70000 m-1  cm-1 ), (c) Stokes shifts in the range of ca. 2500-5800 cm-1 , and (d) strong fluorescence emission with quantum yields of up to 0.74. This yields very bright-emitting dyes for one-photon excitation. However, the most intriguing feature of the dyes is their strong two-photon absorption. This was achieved by means of increased π-conjugation in the phenylene or phenylene-thiophene bridges through the variation of the conjugation length and rigidity. This provided two-photon absorption cross sections of up to 2800 GM (1 Goeppert-Mayer (GM)=10-50  cm4 s photon-1 ). Considering the mentioned high fluorescence quantum yields, exceptionally bright-emitting A-π-A two-photon absorbing dyes with low molecular mass are obtained. Time-dependent density-functional theory calculations corroborated the experimental results.

Selenium-containing chrysin and quercetin derivatives: attractive scaffolds for cancer therapy.

Selenium-containing chrysin (SeChry) and 3,7,3',4'-tetramethylquercetin (SePQue) derivatives were synthesized by a microwave-based methodology. In addition to their improvement in terms of DPPH scavenging and potential GPx-like activities, when tested in a panel of cancer cell lines both selenium-derivatives revealed consistently to be more cytotoxic when compared with their oxo and thio-analogues, evidencing the key role of selenocabonyl moiety for these activities. In particular, SeChry elicited a noteworthy cytotoxic activity with mean IC50 values 18- and 3-fold lower than those observed for chrysin and cisplatin, respectively. Additionally, these seleno-derivatives evidenced an ability to overcome cisplatin and multidrug resistance. Notably, a differential behavior toward malignant and nonmalignant cells was observed for SeChry and SePQue, exhibiting higher selectivity indexes when compared with the chalcogen-derivatives and cisplatin. Our preliminary investigation on the mechanism of cytotoxicity of SeChry and SePQue in MCF-7 human mammary cancer cells demonstrated their capacity to efficiently suppress the clonal expansion along with their ability to hamper TrxR activity leading to apoptotic cell death.

Coupled states in dinitrofluorene: relationships between ground state and excited state mixed valence.

The electronic absorption spectrum of 9,9-dimethyl-2,7-dinitrofluorene radical anion in HMPA displays both a NIR intervalence charge transfer and a visible excited state mixed valence transition. These transitions contain a similar vibronic progression resulting from molecular orbitals that are common to both transitions. Vibrational frequency and intensity data are acquired from the resonance Raman spectrum and used to calculate a best fit for the absorption spectrum. The normal coordinate distortions are analyzed in terms of the electronic changes for both transitions to explain their similarity. The Raman scattering intensity decreases at lower excitation wavelength as a result of Raman de-enhancement caused by interference between neighboring excited states.

Production of poly(3-hydroxybutyrate-co-4-hydroxybutyrate) by Burkholderia sacchari using wheat straw hydrolysates and gamma-butyrolactone.

Burkholderia sacchari DSM 17165 is able to grow and produce poly(3-hydroxybutyrate) both on hexoses and pentoses. In a previous study, wheat straw lignocellulosic hydrolysates (WSH) containing high C6 and C5 sugar concentrations were shown to be excellent carbon sources for P(3HB) production. Using a similar feeding strategy developed for P(3HB) production based on WSH, fed-batch cultures were developed aiming at the production of the copolymer P(3HB-co-4HB) (poly(3-hydroxybutyrate-co-4-hydroxybutyrate)) by B. sacchari. The ability of this strain to synthesize P(3HB-co-4HB) was first shown in shake flasks using gamma-butyrolactone (GBL) as precursor of the 4HB units. Fed-batch cultures using glucose as carbon source (control) and GBL were developed to achieve high copolymer productivities and 4HB incorporations. The attained P(3HB-co-4HB) productivity and 4HB molar% were 0.7g/(Lh) and 4.7molar%, respectively. The 4HB incorporation was improved to 6.3 and 11.8molar% by addition of 2g/L propionic and acetic acid, respectively. When WSH were used as carbon source under the same feeding conditions, the values achieved were 0.5g/(Lh) and 5.0molar%, respectively. Burkholderia sacchari, a strain able to produce biopolymers based on xylose-rich lignocellulosic hydrolysates, is for the first time reported to produce P(3HB-co-4HB) using gamma butyrolactone as precursor.

Electronic communication in linear oligo(azobenzene) radical anions.

The radical anions of five bis(azobenzene) and one tris(azobenzene) compounds were studied by optical and electron paramagnetic resonance (EPR) spectroscopies in polar aprotic solvents. The radicals with planar or almost-planar bridges are charge-delocalized mixed-valence species. Localization of charge occurs only on radicals with highly twisted biphenyl bridges. The electronic coupling between the azobenzene charge-bearing units, calculated as half the energy of the intervalence band for the charge-delocalized and by the Hush equation for the charge-localized radicals, decreases with the distance and torsion angle between azobenzene units. These radicals have smaller electronic couplings between charge-bearing units than other mixed-valence organic radicals with similar bridges. However, the application of a three-stage model to the tris(azobenzene) radical anion intervalence band yields an electronic coupling between consecutive azobenzenes that is higher than in any of the bis(azobenzene) radicals studied.

Dynamics of intramolecular electron transfer in dinitrodibenzodioxin radical anions.

The activation energy for intramolecular electron transfer in radical anions of 2,7-dinitrodibenzodioxin and 2,8-dinitrodibenzodioxin, obtained by simulation of their temperature-dependent EPR spectra, are well predicted by the values calculated by the two-state Marcus-Hush model from the optical charge-transfer bands using quartic-adjusted energy surfaces. The electronic coupling is higher in the 2,8-dinitrodibenzodioxin (H(ab) = 485 cm(-1)) than in the 2,7-dinitrodibenzodioxin radical anion (H(ab) = 250 cm(-1)), but for each solvent the reorganization energy, taken as the maximum of the optical band, is only slightly higher in the latter. These values are consistent with the fact that the reaction is faster in the 2,8-dinitrodibenzodioxin radical anion isomer, as determined by EPR spectroscopy. The pre-exponential factors obtained combining the EPR-derived rate constants and the activation energies calculated from the optical bands fit well the theoretical (modified) nonadiabatic values in the less viscous solvents. However, for the more viscous solvents, the trend of the pre-exponential values with solvent can only be explained if dynamical solvent effects increasingly influence their value. The influence of solvent dynamics in the 2,8-dinitrodibenzodioxin radical anion starts in the less viscous solvents DMF and DMSO, but in the 2,7-dinitrodibenzodioxin isomer this is only fully evident for the more viscous PhCN and HMPA. The influence of solvent dynamics is higher in the radical with the lowest activation barrier.

Effect of ortho substitution on the charge localization of dinitrobenzene radical anions.

Optical and electron paramagnetic resonance spectroscopies were used to study the radical anions of several m-dinitrobenzenes and p-dinitrobenzenes with substituents on ortho positions relative to the nitro groups. 1,4-Dinitrobenzene, 1,4-dimethyl-2,5-dinitrobenzene, and 2,5-dinitrobenzene-1,4-diamine radical anions are delocalized (class III) mixed valence species, but in the dinitrodurene radical anion the nitro groups are forced out of the ring plane due to the steric hindrance, which results in localization of the charge. The radical anions m-dinitrobenzene, 2,6-dinitrotoluene, and dinitromesitylene are all localized (class II) mixed valence species, as is common for m-dinitrobenzenes, and the rate of intramolecular electron transfer reaction strongly decreases with the number of methyl substituents. The same mechanism of rotation of the nitro groups out of the ring plane due to steric hindrance caused by neighboring methyl groups is also responsible for slowing the reaction. However, 2,6-dinitroaniline radical anion and 2,6-dinitrophenoxide radical dianion are charge-delocalized because the strong electron releasing amino and oxido groups increase the conjugation between the two charge-bearing units.

Solvent effects on the coexistence of localized and delocalized 4,4'-dinitrotolane radical anion by resonance Raman spectroscopy.

The resonance Raman spectrum of the simple alkyne bridge in 4,4'-dinitrotolane radical anion shows two distinct bands, providing proof of the solvent-dependent coexistence of charge-localized and -delocalized species. The Raman spectra of normal modes primarily involving the charge-bearing -PhNO(2) units also support the coexistence of two solvent-dependent electronic species. The temperature dependence of the spectra of the bridging unit shows an inverse relationship between the solvent reorganization energy (lambda(s)) and the temperature.

Insights into the mechanisms of toxicity and tolerance to the agricultural fungicide mancozeb in yeast, as suggested by a chemogenomic approach.

Abstract Saccharomyces cerevisiae was used to uncover the mechanisms underlying tolerance and toxicity of the agricultural fungicide mancozeb, linked to cancer and Parkinson's disease development. Chemogenomics screening of a yeast deletion mutant collection revealed 286 genes that provide protection against mancozeb toxicity. The most significant Gene Ontology (GO) terms enriched in this dataset are associated to transcriptional machinery, vacuolar organization and biogenesis, intracellular trafficking, and cellular pH regulation. Clustering based on physical and genetic interactions further highlighted the role of oxidative stress response, protein degradation and carbohydrate/energy metabolism in mancozeb stress tolerance. Mancozeb was found to act in yeast as a thiol-reactive compound, but not as a free radical or reative oxygen species (ROS) inducer, leading to massive oxidation of protein cysteins, consistent with the requirement of genes involved in glutathione biosynthesis and reduction and in protein degradation to provide mancozeb resistance. The identification of Botrytis cinerea homologues of yeast mancozeb tolerance determinants is expected to guide studies on mancozeb mechanisms of action and tolerance in phytopathogenic fungi. The generated networks of protein-protein associations of yeast mancozeb tolerance determinants and their human orthologues share a high degree of similarity. This toxicogenomics analysis may, thus, increase the understanding of mancozeb toxicity and adaptation mechanisms in humans.

Electron transfer within charge-localized dinitroaromatic radical anions.

Rate constants for the intramolecular electron-transfer reaction in the 2,7-dinitronaphthalene (2(-)), 4,4'-dinitrotolane (3(-)), and 2,2'-dimethyl-4,4'-dinitrobiphenyl (4(-)) radical anions in several polar aprotic solvents were estimated by simulating their ESR spectra at different temperatures. At 298 K, the rate constants are in the 2.0-8.0 x 10(9) s(-1) range for 2(-) and 3(-) and in the 0.4-2.6 x 10(9) s(-1) range for 4(-). The rate constants of 3(-) and 4(-), when corrected for changes in the activation energy (taken as the changes in lambda, the transition energy of the mixed valence band), correlate with the inverse of the solvent relaxation time, showing that the reaction is controlled by solvent dynamics. Solvent effects are only found for 2(-) in benzonitrile (PhCN), the most viscous solvent studied. Calculations of the rate constants using the Kramers-based theory adapted to the adiabatic limit fit the Eyring plots of 2(-) in PhCN and of 3(-) and 4(-) both in MeCN and PhCN rather well.

Interpretation of mixed-valence compound optical spectra near the class II/III border: dinitrobiphenyl and dinitrophenanthrene radical anions.

The optical spectra of 4,4'-dinitrobiphenyl and other similar 9-bond bridged radical anions show that these mixed-valence compounds are predominantly charge-localized in the high lambda(S) solvent MeCN, charge-delocalized in the low lambda(S) solvent HMPA, and show intermediate behavior in DMF. Hush analysis of the localized charge-transfer band in MeCN allowed the calculation of the electronic coupling between nitro groups (Hab). Hab changes with bridge structure, depending mainly on the twist angle between the two aromatic rings: Hab is higher for the planar 9,9-dimethyl-2,7-dinitrofluorene radical anion (1100 cm(-1)) and about one-half of this value for the more twisted 2,2'-dimethyl-4,4'-dinitrobiphenyl radical anion (540 cm(-1)). The reorganization energy lambda decreases as Hab increases. We suggest that this is due to a decrease of the internal reorganization energy lambda(v) as the Class II/Class III borderline is approached, and that lambda(v) should be zero at the borderline. Subtracting from the experimental spectra the fraction corresponding to the delocalized part (taken as the spectrum in HMPA or THF), we get localized charge-transfer bands that show a significant cutoff effect at the low energy side, as predicted by classical Marcus-Hush theory.

Structure and redox properties of radicals derived from one-electron oxidised methylxanthines.

The repair of the one electron oxidised form of a xanthine derivative by another xanthine derivative was studied by reacting aqueous binary mixtures of xanthine derivatives with sulphate radical anion (SO(4)( -)) and following the concentration of both compounds as a function of time. The relative behaviour observed enabled the establishment of a qualitative order of antioxidant capacities for the several xanthines studied in acidic and neutral media. The same order was confirmed quantitatively by measuring the reduction potentials of the xanthines by cyclic voltammetry. Theoretical DFT calculations were used to calculate the relative stabilities of the tautomers of each xanthine neutral radical. It was also demonstrated that the deprotonation of a xanthine radical cation never occurs from N1, unless no other possibility is available. At high pH values, it was possible to obtain the ESR spectra of the radical anions derived from 1-methylxanthine, 3-methylxanthine and xanthosine. The theoretical calculations also enabled the assignment of the ESR hyperfine coupling constants of the spectra of these radical anions. The coupling constants calculated are in good agreement with the experimental values.

Experimental and computational studies of nuclear substituted 1,1'-dimethyl-2,2'-bipyridinium tetrafluoroborates.

The synthesis and spectral properties of a new 2,2'-bipyridinium ion, 1,1'-dimethyl-4,4'-(dimethylamino)-2,2'-bipyridinium bis(tetrafluoroborate) are reported. Rotation of the dimethylamino group is slow at room temperature on the 400 MHz 1H and 100 MHz 13C NMR time scales. Complete line shape fit of the dynamically broadened NMR spectra was used to determine the activation barriers for this process. The first complete set of UV-vis spectra for a 2,2'-bipyridinium dication and its one- and two-electron reduced products was reported. TD-DFT calculations were used to help assign the origin of the long wavelength absorptions in these species. The effect of substituents on the energies and conformational potential energy surfaces of all three species were also examined using the B3LYP/6-31G(d) computational method.

Charge localization in a 17-bond mixed-valence quinone radical anion.

Optical spectra in dimethylformamide are reported for the radical anions of benzoquinone, its tetramethyl and tetrachloro analogues, and tetra-ortho-alkyl derivatives of biphenyl, stilbene, terphenyl, quadriphenyl, and 1,4-bis(2-phenylethenyl)benzene quinones. The first absorption bands for all but the quadriphenyl quinone show vibrational fine structure, demonstrating that they are delocalized (Class III) mixed-valence compounds. The quadriphenyl quinone radical anion shows a wide Gaussian-shaped band having a band maximum that is strongly dependent on solvent, typical of localized (Class II) mixed-valence compounds. The simple O charge-bearing unit of these compounds maintains charge delocalization in examples with unusually large bridges.

Solvent control of charge localization in 11-bond bridged dinitroaromatic radical anions.

The optical spectra of 4,4'-dinitrostilbene (1-) and 4,4'-dinitrotolane (2-) radical anions show the narrow band widths and partially resolved vibrational structure exhibited by charge-delocalized dinitroaromatic radical anions in the solvents THF, HMPA, and DMPU (dimethylpropyleneurea). Both show the broad, nearly Gaussian-shaped bands found for charge-localized intervalence compounds in DMF, DMSO, and MeCN, with the transition energy of the band maximum, which equals the vertical reorganization energy (lambda) for localized intervalence compounds, increasing in that order. In contrast, 4,4'-dinitroazobenzene (3-) remains delocalized in these solvents, although the line width required to simulate the vibrational structure increases by 200 cm-1 in DMF and 400 cm-1 in MeCN compared to HMPA. The change from localized to delocalized spectra as a function of solvent establishes the transition energy for which delocalization occurs and demonstrates that, as predicted, the Hush method substantially underestimates the electronic coupling for compounds that lie near the borderline.

Koopmans-based analysis of the optical spectra of p-phenylene-bridged intervalence radical ions.

[Figure: see text]. The optical spectra of 10 p-phenylene-bridged delocalized intervalence compounds MC6H4M*- or *+ are analyzed using the Koopmans-based method, which considers only transitions from filled orbitals to the singly occupied orbital (SOMO), called Hoijtink type A transitions, and from the SOMO to unoccupied orbitals, Hoijtink type B transitions, and ignores configuration interaction. The radical ions with quinonoid structures, those that form ring-M double bonds with M = C(CN)2, NMe2, 3-oxo-9-azabicyclo[3.3.1], NPPh3, and O when the odd electron of the intervalence oxidation level is removed, are calculated to have the lowest-allowed type B transition lying mostly above the lowest-allowed A transition, with B(i)- A(j) decreasing in the order shown from +14 370 to -1390 cm(-1), and the more intense second-lowest-allowed type B transition B(i) - A(j) from +14 940 to +7070 cm(-1). The five radical anions with benzenoid structures, which form ring-M single bonds with X = CN, CO2Me, CHO, C3HMeBF2O2, and NO2 when the odd electron of the intervalence oxidation level is removed, have a B(i)- A(j) value of the opposite sign that increases in magnitude from -2880 to -17 050 cm(-)(1) in the order shown. Configuration interaction is of course present in the observed spectra, and the predictions ignoring it mostly overestimate transition energies by 1900-2600 cm(-1) for the quinonoid compounds (but by 450 cm(-1) for the M = C(CN)2 radical anion), and by 1000-1400 cm(-1) for the benzenoid compounds (2500 cm(-1) for the M = CN radical anion). The very simple Koopmans-based model is useful for considering the optical spectra of these radical ions.

Optical spectra of delocalized dinitroaromatic radical anions revisited.

The optical spectra of nine dinitroaromatic radical anions (1,2- and 1,4-dinitrobenzene, 1,5- and 2,6-dinitro naphthalene, 4,4'-dinitrobiphenyl, 2,7-dinitro-9,9-dimethylfluorene, 2,6-dinitroanthracene, and 2,7- and 1,8-dinitrobiphenylene) in dimethylformamide are reported and analyzed. All have delocalized charge distribution, as demonstrated by the vibrational fine structure that is observed in their optical spectra: All show lowest energy absorption bands that correspond to an alpha-homo (highest occupied molecular orbital) to alpha-lumo (lowest unoccupied) transition, as shown by Koopmans-based UB3LYP calculation of the orbital separation of the neutral at the geometry of the radical anion. These single-point calculations are shown to be significantly more accurate for five of these compounds than the much more complex and expensive TD-DFT method. The two-state model should not be used to estimate the electronic coupling in delocalized intervalence compounds such as these. Neighboring orbital estimation of the electronic couplings show that using the two-state model greatly underestimates electronic coupling here.

Pseudo-para-dinitro[2.2]paracyclophane radical anion, a mixed-valence system poised on the Class II/Class III borderline.

Analysis of optical spectra of a pseudo-para-dinitro[2.2]paracyclophane radical anion using Marcus-Hush theory reveals that its off diagonal coupling element, H(ab), is large enough, relative to its reorganization energy, to change it from a localized class II compound to a delocalized class III compound by changing solvents. The optical spectra, along with frontier orbital analysis, show that the assumption that E(op) = 2H(ab) for class III compounds is not true in this case.