Evaluation of Cross-Species Transferability of SSR Markers in Foeniculum vulgare.

Fennel (Foeniculum vulgare) is a species belonging to the Apiaceae family, well known for its nutritional and pharmacological properties. Despite the economic and agricultural relevance, its genomic and transcriptomic data remain poor. Microsatellites-also known as simple sequence repeats (SSRs)-are codominant markers widely used to perform cross-amplification tests starting from markers developed in related species. SSRs represent a powerful tool, especially for those species lacking genomic information. In this study, a set of primers previously designed in Daucus carota for polymorphic SSR loci was tested in commercial varieties and breeding lines of fennel in order to: (i) test their cross-genera transferability, (ii) look at their efficiency in assessing genetic diversity, and (iii) identify their usefulness for marker-assisted selection (MAS) in breeding programs. Thirty-nine SSR markers from carrot were selected and tested for their transferability score, and only 23% of them resulted suitable for fennel. The low rate of SSR transferability between the two species evidences the difficulties of the use of genomic SSR in cross-genera transferability.

Gas distribution in a two-compartment model during volume or pressure ventilation: role of elastic elements.

The results of the studies on pulmonary gas distribution during constant-flow controlled-volume inflation (VCV) and inspiratory constant pressure inflation (PCV) in experimental studies are conflicting. In a mathematical model, with the characteristics of two lung compartments including tissue viscoelastic properties, pulmonary gas distribution was tested by simulating PCV and VCV at same inflation volumes. The compartmental distributions of the tidal volume were compared during CMV and PCV in different configurations obtained by changing the elastic and viscoelastic properties in each compartment, but maintaining the same total values of respiratory mechanics measured in patients. In all instances PCV resulted in a slightly higher air-trapping than in VCV mode. Heterogeneous elastic properties diverted most of the tidal volume towards the less compromised compartment. However, both ventilatory modes provided similar compartmental gas distribution, but during VCV compartmental peak pressures were higher in the sicker compartment respect to PCV. The use of PCV could grant a less remarkable pressure variability able to reduce the potential ventilator-associated lung injury. Moreover, the parameters measured during an end-inspiratory pause could not pinpoint unique characteristics for each configuration.

Effects of viscoelasticity on volume distribution in a two-compartmental model of normal and sick lungs.

Among the models describing respiratory mechanics none has been published with the characteristics of two lung compartments including the viscoelastic properties. We used such a model to describe the inspiratory compartmental volume distribution under homogeneous and inhomogeneous conditions. The present mathematical model was tested against actual data and proven accurate. The volume distribution was studied using data from normal subjects and from patients with COPD and ARDS. In a normal lung, changes in viscoelastic constants in one compartment can modify substantially the volume distribution diverting more or less gas to the other compartment. In diseased compartments, the increase of viscoelasticity increased the difference between the compartments and the opposite was true in the less affected compartment. In conclusion, the viscoelastic properties are of paramount importance in determining gas distribution in normal and sick lungs.