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1.
IEEE/ACM Trans Comput Biol Bioinform ; 18(4): 1315-1324, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-31514149

RESUMEN

Biological targets are most commonly proteins such as enzymes, ion channels, and receptors. They are anything within a living organism to bind with some other entities (like an endogenous ligand or a drug), resulting in change in their behaviors or functions. Exploring potential drug-target interactions (DTIs) are crucial for drug discovery and effective drug development. Computational methods were widely applied in drug-target interactions, since experimental methods are extremely time-consuming and resource-intensive. In this paper, we proposed a novel deep learning-based prediction system, with a new negative instance generation, to identify DTIs. As a result, our method achieved an accuracy of 0.9800 on our created dataset. Another dataset derived from DrugBank was used to further assess the generalization of the model, which yielded a good performance with accuracy of 0.8814 and AUC value of 0.9527 on the dataset. The outcome of our experimental results indicated that the proposed method, involving the credible negative generation, can be employed to discriminate the interactions between drugs and targets. Website: http://www.dlearningapp.com/web/DrugCNN.htm.


Asunto(s)
Biología Computacional/métodos , Desarrollo de Medicamentos/métodos , Descubrimiento de Drogas/métodos , Redes Neurales de la Computación , Algoritmos , Aprendizaje Profundo , Preparaciones Farmacéuticas/química , Preparaciones Farmacéuticas/metabolismo , Proteínas/química , Proteínas/metabolismo
2.
Sensors (Basel) ; 18(12)2018 Nov 27.
Artículo en Inglés | MEDLINE | ID: mdl-30486481

RESUMEN

Regarding the growth of crops, one of the important factors affecting crop yield is insect disasters. Since most insect species are extremely similar, insect detection on field crops, such as rice, soybean and other crops, is more challenging than generic object detection. Presently, distinguishing insects in crop fields mainly relies on manual classification, but this is an extremely time-consuming and expensive process. This work proposes a convolutional neural network model to solve the problem of multi-classification of crop insects. The model can make full use of the advantages of the neural network to comprehensively extract multifaceted insect features. During the regional proposal stage, the Region Proposal Network is adopted rather than a traditional selective search technique to generate a smaller number of proposal windows, which is especially important for improving prediction accuracy and accelerating computations. Experimental results show that the proposed method achieves a heightened accuracy and is superior to the state-of-the-art traditional insect classification algorithms.

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