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1.
DNA Seq ; 17(2): 122-8, 2006 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-17076254

RESUMEN

An amphioxus cDNA, AmphiGM2AP, encoding GM2 activator protein was isolated from the gut cDNA library of Branchiostoma belcheri. It is 907 bp long, and its longest open reading frame codes for a precursor protein consisting of 242 amino acid residues with a signal peptide of 14 amino acids. The deduced amino acid sequence includes a conserved domain typical of GM2APs between residues 53 and 224, a single N-linked glycosylation site at position 65 and 8 conserved cysteines. Phylogenetic analysis showed that amphiGM2AP forms a club together with invertebrate GM2APs, indicating that AmphiGM2AP is evolutionarily closely related to invertebrate GM2APs rather than vertebrate ones. Both Northern blotting and in situ hybridization histochemistry analyses revealed a tissue-specific expression pattern of AmphiGM2AP in adult amphioxus with the strongest expression in the digestive system, which is in contrast to the widespread expression pattern of human, mouse and sheep GM2AP genes. It is suggested that AmphiGM2AP is possibly involved in the take-in of digested food components like lipid molecules.


Asunto(s)
Cordados no Vertebrados/genética , Proteína Activadora de G (M2)/genética , Regulación de la Expresión Génica , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Proteína Activadora de G (M2)/química , Perfilación de la Expresión Génica , Biblioteca de Genes , Datos de Secuencia Molecular , Alineación de Secuencia
2.
Acta Biochim Biophys Sin (Shanghai) ; 38(8): 549-55, 2006 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-16894477

RESUMEN

UreG genes have been found in bacteria, fungi and plants but have not yet identified in animals, although a putative UreG-like gene has been documented in sea urchin. In the course of a large-scale sequencing of amphioxus gut cDNA library, we have identified a cDNA with high similarity to UreG genes. Both reverse transcription-polymerase chain reaction and nested polymerase chain reaction, as well as in situ hybridization histochemistry, verified that the cDNA represented an amphioxus UreG gene (AmphiUreG) rather than a microbial contaminant of the cDNA library. This is further supported by the presence of urease activity in amphioxus gut, gill and ovary. AmphiUreG encodes a deduced protein of 200 amino acid residues including a highly conserved P-loop, bearing approximately 46%-49%, 44%-48%, and 29%-37% similarity to fungal, plant and bacterial UreG proteins, respectively. It shows a tissue-specific expression pattern in amphioxus, and is especially abundant in the digestive system. This is the first UreG gene identified in animal species.


Asunto(s)
Proteínas Portadoras/genética , Cordados no Vertebrados/genética , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Proteínas Portadoras/clasificación , Proteínas Portadoras/metabolismo , Cordados no Vertebrados/enzimología , Cordados no Vertebrados/metabolismo , Expresión Génica , Datos de Secuencia Molecular , Filogenia , Reacción en Cadena de la Polimerasa , ARN Mensajero/análisis , Alineación de Secuencia , Distribución Tisular , Ureasa/metabolismo
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