Corrigendum: Exploring the molecular mechanism of hepatitis virus inducing hepatocellular carcinoma by microarray data and immune infiltrates analysis.

[This corrects the article DOI: 10.3389/fimmu.2022.1032819.].

Pore Environment Optimization of Microporous Metal-Organic Frameworks with Huddled Pyrazine Pillars for C2H2/CO2 Separation.

Metal-organic frameworks (MOFs) have been proven promising in addressing many critical issues related to gas separation and purification. However, it remains a great challenge to optimize the pore environment of MOFs for purification of specific gas mixtures. Herein, we report the rational construction of three isostructural microporous MOFs with the 4,4',4"-tricarboxyltriphenylamine (H3TCA) ligand, unusual hexaprismane Ni6O6 cluster, and functionalized pyrazine pillars [PYZ-x, x = -H (DZU-10), -NH2 (DZU-11), and -OH (DZU-12)], where the building blocks of Ni6O6 clusters and huddled pyrazine pillars are reported in porous MOFs for the first time. These building blocks have enabled the resulting materials to exhibit good chemical stability and variable pore chemistry, which thus contribute to distinct performances toward C2H2/CO2 separation. Both single-component isotherms and dynamic column breakthrough experiments demonstrate that DZU-11 with the PYZ-NH2 pillar outperforms its hydrogen and hydroxy analogues. Density functional theory calculations reveal that the higher C2H2 affinity of DZU-11 over CO2 is attributed to multiple electrostatic interactions between C2H2 and the framework, including strong C≡C···H-N (2.80 Å) interactions. This work highlights the potential of pore environment optimization to construct smart MOF adsorbents for some challenging gas separations.

Exploring the molecular mechanism of hepatitis virus inducing hepatocellular carcinoma by microarray data and immune infiltrates analysis.

The number of new cases of hepatocellular carcinoma (HCC) worldwide reached 910,000, ranking the sixth, 80% HCC is associated with viruses, so exploring the molecular mechanism of viral carcinogenicity is imperative. The study showed that both HBV and HCV associated HCC and non-viral HCC have the same molecular phenotype (low gene expression and inhibition of immune pathways), but in the tumor immune micro-environment, there is excessive M2-type macrophage polarization in virus-associated hepatocellular carcinoma. To address this phenomenon, the data sets were analyzed and identified five hub genes (POLR2A, POLR2B, RPL5, RPS6, RPL23A) involved in viral gene expression and associated with PI3K-Akt-mTOR pathway activation by six algorithms. In addition, numerous studies have reported that M2-type macrophages participate in the hepatic fibro-pathological process of the development of HCC and are regulated by the PI3K-Akt-mTOR pathway. On this basis, the study showed that hepatitis virus causes abnormal expression of hub genes, leading to the activation of the pathway, which in turn promote the differentiation of M2-type macrophages and eventually promote the formation of liver fibrosis, leading to the occurrence of HCC. In addition, these hub genes are regulated by transcription factors and m6A enzyme, and have good prognosis and diagnostic value. With regard to drug reuse, the results suggest that patients with virus-related HCC for whom Cytidine triphosphate disodium salt and Guanosine-5'-Triphosphate are used as supplementary therapy, and may have a better prognosis. In conclusion, the study has identified novel molecules that are carcinogenic to hepatitis viruses and are expected to serve as molecular markers and targets for diagnosis and treatment.

The In Vitro Effect of Psoralen on Glioma Based on Network Pharmacology and Potential Target Research.

Glioma is an aggressive tumor, currently there is no satisfactory management available. Psoralen, as a natural product, has been found to have an effect of treating cancer in recent years, but its effect on glioma has not been explored. In this study, we investigated the in vitro inhibition effect and potential targets of psoralen on glioma through network pharmacology and in vitro glioma treatment experiments. First, we used network pharmacology to preliminarily predict the 21 core genes of psoralen in the treatment of glioma, including PIK3CA, PIK3CB, PIK3CG, and JAK2. The CCK-8 method was used to detect the effect of psoralen on the proliferation of glioma U87 and U251 cells, and the results showed that psoralen could significantly inhibit the proliferation of U87 and U251 cells. The flow cytometry was used to detect the apoptosis and cell cycle changes, and it was found that psoralen could significantly promote the early apoptosis of U87 and U251 cells and had a significant cycle arrest effect on the two cells. The cell scratch test showed that psoralen could significantly inhibit the migration of U87 and U251 cells. The relative expression levels of PIK3CA, PIK3CB, PIK3CG, and JAK2 were analyzed by Real-time Quantitative polymerase chain reaction (QT-PCR), and the results showed that psoralen could inhibit the gene expression of PIK3CA, PIK3CB, PIK3CG, and JAK2. Later, Western blotting (WB) experiments showed that psoralen could inhibit the protein expressions of PI3K and JAK2. This study has preliminarily explored and verified the antiglioma effect of psoralen in the form of inhibiting cell proliferation and migration, promoting cell apoptosis and organizing cell cycle in vitro. And may play a role by inhibiting the expression of PIK3CA, PIK3CB, PIK3CG, JAK2 gene and PI3K, JAK2 protein, psoralen has become a potential antiglioma drug.

Trace removal of benzene vapour using double-walled metal-dipyrazolate frameworks.

In principle, porous physisorbents are attractive candidates for the removal of volatile organic compounds such as benzene by virtue of their low energy for the capture and release of this pollutant. Unfortunately, many physisorbents exhibit weak sorbate-sorbent interactions, resulting in poor selectivity and low uptake when volatile organic compounds are present at trace concentrations. Herein, we report that a family of double-walled metal-dipyrazolate frameworks, BUT-53 to BUT-58, exhibit benzene uptakes at 298 K of 2.47-3.28 mmol g-1 at <10 Pa. Breakthrough experiments revealed that BUT-55, a supramolecular isomer of the metal-organic framework Co(BDP) (H2BDP = 1,4-di(1H-pyrazol-4-yl)benzene), captures trace levels of benzene, producing an air stream with benzene content below acceptable limits. Furthermore, BUT-55 can be regenerated with mild heating. Insight into the performance of BUT-55 comes from the crystal structure of the benzene-loaded phase (C6H6@BUT-55) and density functional theory calculations, which reveal that C-H···X interactions drive the tight binding of benzene. Our results demonstrate that BUT-55 is a recyclable physisorbent that exhibits high affinity and adsorption capacity towards benzene, making it a candidate for environmental remediation of benzene-contaminated gas mixtures.

Interpenetrated metal-organic frameworks with enhanced photoluminescence for selective recognition of m-xylene from xylene isomers.

Two novel luminescent metal-organic frameworks (MOFs), [Zn3(TCA)2(BPB)2]n (DZU-101, where H3TCA = 4,4',4''-tricarboxyltriphenylamine and BPB = 1,4-bis(pyrid-4-yl)benzene) and [Zn3(TCA)2(BPB)DMA]n (DZU-102), based on the same ligands and metal ions were synthesized by regulating the amount of water in the solvothermal reaction system. Structural analyses show that the two MOFs have pillar-layered frameworks with Zn3 clusters connected by the TCA3- and BPB ligands. Interestingly, DZU-102 possessed a two-fold interpenetrated framework distinct from the individual network of DZU-101. As a result, DZU-102 showed a visual fluorescence color change from chartreuse to azure in m-xylene, while the fluorescence color was turquoise in p-/o-xylene with no change. Furthermore, compared with p/o-xylene, the fluorescence emission peak of DZU-102 in m-xylene suspension produced an obvious blue shift. Moreover, selective fluorescence sensing experiments were also carried out, which demonstrated that the degree of peak shift was related to the concentration of m-xylene, indicating the potential application of DZU-102 in fluorescence sensing of m-xylene from xylene isomers and further revealed the application of structural interpenetration for luminescence tuning of MOFs.

Pillar-Layered Metal-Organic Frameworks Based on a Hexaprismane [Co6(µ3-OH)6] Cluster: Structural Modulation and Catalytic Performance in Aerobic Oxidation Reaction.

Embedding a functional metal-oxo cluster within the matrix of metal-organic frameworks (MOFs) is a feasible approach for the development of advanced porous materials. Herein, three isoreticular pillar-layered MOFs (Co6-MOF-1-3) based on a unique [Co6(µ3-OH)6] cluster were designed, synthesized, and structurally characterized. For these Co6-MOFs, tuning of the framework backbone was facilitated due to the existence of second ligands, which results in adjustable apertures (8.8 to 13.4 Å) and high Brunauer-Emmett-Teller surfaces (1896-2401 m2 g-1). As the [Co6(µ3-OH)6] cluster has variable valences, these MOFs were then utilized as heterogeneous catalysts for the selective oxidation of styrene and benzyl alcohol, showing high conversion (>90%) and good selectivity. The selectivity of styrene to styrene oxide surpassed 80% and that of benzyl alcohol to benzaldehyde was up to 98%. The calculated TOF values show that the increase of reaction rate is positively correlated with the enlargement of pore sizes in these MOFs. Further, a stability test and cycling experiment proved that these Co6-MOFs have well-observed stability and recyclability.

A Green-Emission Metal-Organic Framework-Based Nanoprobe for Imaging Dual Tumor Biomarkers in Living Cells.

The modular nature of metal-organic frameworks (MOFs) permits their tunable structure and function for target application, such as in biomedicine. Herein, a green-emission Zr(IV)-MOF (BUT-88) was constructed from a customized luminescent carbazolyl ligand. BUT-88 represents the first bcu-type MOF with both organic linker and metal node in eight connections and shows medium-sized pores, rich accessible linking sites, and good water stability and biocompatibility. In virtue of these merits, BUT-88 was then fabricated into a MOF-based fluorescent nanoprobe, drDNA-BUT-88. Using it, the live-cell imaging of dual tumor biomarkers was achieved for the first time upon a MOF-based probe, offering enhanced detection precision in early cancer diagnosis. Particularly, the probe showed efficient ratiometric fluorescent sensing toward the cytoplasmic biomarker microRNA-21, further improving the detection accuracy at the cellular level. In this work, the elaborate combination of MOF engineering and the fluorescent detection technique has contributed a facile biosensing platform, unlocking more possibilities of MOF chemistry.

Combining unsaturated metal sites and narrow pores within a Co(ii)-based MOF towards CO2 separation and transformation.

A Co(ii)-based MOF, {[Co3(L)2(bpb)(DMA)(H2O)]·Solvents}n (RH-1), with a unique interpenetrated framework has been solvothermally prepared. Because of its unsaturated metal sites and narrow pores inside the framework, RH-1 demonstrated excellent selective CO2 adsorption over N2 and CH4 and good performance in catalytic CO2 conversion to cyclic carbonates under mild conditions.

Two microporous CoII-MOFs with dual active sites for highly selective adsorption of CO2/CH4 and CO2/N2.

Simultaneously involving abundant [NH2(CH3)2]+ cations and uncoordinated carboxylate oxygen atoms as dual active sites, two microporous CoII-MOFs (LCU-105 and LCU-106, LCU = Liaocheng University) both exhibit highly selective adsorption of CO2/CH4 and CO2/N2. GCMC theoretical simulations provide good verification of the experimental results.

Ligand Rigidification for Enhancing the Stability of Metal-Organic Frameworks.

Metal-organic frameworks (MOFs) have been developing at an unexpected rate over the last two decades. However, the unsatisfactory chemical stability of most MOFs hinders some of the fundamental studies in this field and the implementation of these materials for practical applications. The stability in a MOF framework is mostly believed to rely upon the robustness of the M-L (M = metal ion, L = ligand) coordination bonds. However, the role of organic linkers as agents of stability to the framework, particularly the linker rigidity/flexibility, has been mostly overlooked. In this work, we demonstrate that a ligand-rigidification strategy can enhance the stability of MOFs. Three series of ligand rotamers with the same connectivity but different flexibility were prepared. Thirteen Zr-based MOFs were constructed with the Zr6O4(OH4)(-CO2) n units ( n = 8 or 12) and corresponding ligands. These MOFs allow us to evaluate the influence of ligand rigidity, connectivities, and structure on the stability of the resulting materials. It was found that the rigidity of the ligands in the framework strongly contributes to the stability of corresponding MOFs. Furthermore, water adsorption was performed on some chemically stable MOFs, showing excellent performance. It is expected that more MOFs with excellent stability could be designed and constructed by utilizing this strategy, ultimately promoting the development of MOFs with higher stability for synthetic chemistry and practical applications.

Nanocage-Based Porous Metal-Organic Frameworks Constructed from Icosahedrons and Tetrahedrons for Selective Gas Adsorption.

Two isostructural nanocage-based porous Ni/Co(II)-MOFs have been hydrothermally synthesized, which were interestingly composed of icosahedron and tetrahedron cages with a new (3,8)-connected 3D topology. Moreover, the stable Ni-MOF exhibits good selective CO2/CH4 and CO2/N2 adsorption owing to its exposed nitrogen active sites.

Constructing new metal-organic frameworks with complicated ligands from "One-Pot" in situ reactions.

Metal-organic frameworks (MOFs) have emerged as one of the most fascinating libraries of porous materials. In spite of their myriad merits, practical application of most MOFs is restricted due to their high preparation cost because of the complicated organic ligands involved. To address this limitation, we propose to use simple and cheap organic precursors to synthesize MOFs with complicated ligands via "one-pot" in situ reactions of these precursors along with the formation of new MOFs. In this work, we have carefully screened several organic reactions, through which target ligands were generated in situ from easily available reactants during the MOF construction. With this "one-pot" approach, the fabrication of a series of novel MOFs by integrating the organic covalent bond and the coordinate bond has thus been realized through the judicious selection of organic reactions, which effectively simplifies the MOF synthesis process and thus reduces the cost.

Structure modulation from unstable to stable MOFs by regulating secondary N-donor ligands.

Four new Zn(ii)/Cd(ii)-based metal-organic frameworks (MOFs), namely {[Cd(tmdb)(bib)0.5]·solvents}n (YZ-7, YZ stands for the initials of the author Yong-Zheng Zhang), {[Cd(tmdb)(bmib)0.5]·solvents}n (YZ-8), {[Zn2(tmdb)2(bmib)]·solvents}n (YZ-9) and {[Zn2(tmdb)2(bmip)2]·solvents}n (YZ-10) have been solvothermally synthesized by using a semi-rigid ligand, 4,4'-(H-1,2,4-triazol-1-yl)methylene-dibenzoic acid (H2tmdb), and a series of secondary bis-imidazole ligands (bib = 1,4-bis(1H-imidazol-1-yl)benzene, bmib = 1,4-bis(2-methyl-1H-imidazol-1-yl)benzene, and bmip = 1,3-bis(2-methyl-1H-imidazol-1-yl)propane). By tuning the flexibility of the auxiliary ligands, these MOFs could be modulated from unstable (YZ-7-YZ-9) to stable (YZ-10) frameworks. Therefore, the gas adsorption properties of YZ-10 are further studied. Interestingly, it shows excellent CO2 selective uptake over CH4 and N2. At 298 K, both selectivities of CO2/CH4 and CO2/N2 show increasing trends and significantly reach 133.2 and 19.9 at 1 atm, respectively. Also, YZ-10 shows uncommon H2 selective uptake over N2 at 77 K. Moreover, the luminescence properties of YZ-8-YZ-10 were studied in the solid state at room temperature.

Tuning Water Sorption in Highly Stable Zr(IV)-Metal-Organic Frameworks through Local Functionalization of Metal Clusters.

Water adsorption of metal-organic frameworks (MOFs) is attracting intense interest because of their potential applications in atmospheric water harvesting, dehumidification, and adsorption-based heating and cooling. In this work, through using a hexacarboxylate ligand, four new isostructural Zr(IV)-MOFs (BUT-46F, -46A, -46W, and -46B) with rare low-symmetric 9-connected Zr6 clusters were synthesized and structurally characterized. These MOFs are highly stable in water, HCl aqueous solution (pH = 1), and NaOH aqueous solution (pH = 10) at room temperature, as well as in boiling water. Interestingly, the rational modification of the metal clusters in these MOFs with different functional groups (HCOO-, CH3COO-, H2O/OH, and PhCOO-) enables the precise tuning of their water adsorption properties, which is quite important for given application. Furthermore, all four MOFs show excellent regenerability under mild conditions and good cyclic performance in water adsorption.

Zr(IV)-Based Metal-Organic Framework with T-Shaped Ligand: Unique Structure, High Stability, Selective Detection, and Rapid Adsorption of Cr2O72- in Water.

Dichromate is known for severe health impairments to organisms. New and valid strategies have been developed to rapidly detect and efficiently remove this pollutant. Constructing stable luminescent metal-organic frameworks (MOFs) for dichromate recognition and removal from aqueous solution could provide a feasible resolution to this problem. Herein, a new luminescent Zr(IV)-MOF, Zr6O4(OH)7(H2O)3(BTBA)3 (BUT-39, BUT = Beijing University of Technology) was constructed through the reaction of a newly designed functionalized T-shaped ligand 4,4',4″-(1 H-benzo[ d]imidazole-2,4,7-triyl)tribenzoic acid (H3BTBA) with zirconium salt. BUT-39 has a unique porous framework structure, in which Zr6 cluster acts as a rare low-symmetric 9-connected node and BTBA3- as a T-shaped 3-connected linker. As far as we know, this represents the first case of a (3,9)-connected Zr(IV)-MOF. BUT-39 could retain its framework integrity in boiling water, 2 M HCl aqueous solution, and pH 12 NaOH aqueous solution. Due to its good water stability and strong fluorescent emission, BUT-39 is then employed in fluorescence sensing for various ions in aqueous solution and shows good performance toward Cr2O72- selectively, at a low concentration and a short response time (<1 min). Simultaneously, it also exhibits excellent capacity to rapidly capture Cr2O72- (within 1 min) with a high uptake up to 1 mmol g-1. Taking advantage of its excellent stability, sensitive and selective sensing, as well as rapid and high adsorption, BUT-39 is expected to be useful in Cr2O72- detection in and removal from water.

Functionalized Base-Stable Metal-Organic Frameworks for Selective CO2 Adsorption and Proton Conduction.

Metal-organic frameworks (MOFs) have shown great potential for application in various fields, including CO2 capture and proton conduction. For promoting their practical applications, both optimization of a given property and enhancement of chemical stability are crucial. In this work, three base-stable isostructural MOFs, [Ni8 (OH)4 (H2 O)2 (BDP-X)6 ] (Ni-BDP-X; H2 BDP=1,4-bis(4-pyrazolyl)benzene, X=CHO, CN, COOH) with different functional groups, are designed, synthesized, and used in CO2 capture and proton conduction experiments. They possess face-centered cubic topological structures with functional nanoscale cavities. Importantly, these MOFs are fairly stable to maintain their structures in boiling water and 4 M sodium hydroxide solution at room temperature. Functionalization endows them with tunable properties. In gas adsorption studies, these MOFs exhibit selective adsorption of CO2 over CH4 and N2 , and in particular the introduction of COOH groups provides the highest selectivity. In addition, the COOH-functionalized Ni-BDP exhibits a high proton conductivity of 2.22×10-3  S cm-1 at 80 °C and approximately 97 % relative humidity.

Water-Stable In(III)-Based Metal-Organic Frameworks with Rod-Shaped Secondary Building Units: Single-Crystal to Single-Crystal Transformation and Selective Sorption of C2H2 over CO2 and CH4.

Three new water-stable In(III)-based metal-organic frameworks, namely, [In3(TTTA)2(OH)3(H2O)]·(DMA)3 (BUT-70, DMA = N,N-dimethylacetamide), [In3(TTTA)2(CH3O)3] (BUT-70A), and [In3(TTTA)2(OH)3] (BUT-70B), with rod-shaped secondary building units (SBUs) and an new acrylate-based ligand, (2E,2'E,2″E)-3,3',3″-(2,4,6-trimethylbenzene-1,3,5-triyl)-triacrylate (TTTA3-) were obtained and structurally characterized. BUT-70A and -70B were generated in a single-crystal to single-crystal transformation fashion from BUT-70 through guest exchange followed by their removal. The solvents used for guest exchange were methanol and dichloromethane, respectively. Single-crystal structure analyses show that the guest exchange and removal process is accompanied by the substitution of coordinated water molecules of In(III) centers with uncoordinated carboxylate O atoms of TTTA3- ligands. Moreover, hydroxyl groups bridging two In(III) centers are also replaced by methoxyl groups in the transformation from BUT-70 to -70A. Overall, three metal-organic frameworks (MOFs) are constructed by infinite chains consisting of corner-sharing InO4(OR)2 (R = H or Me) octahedral entities, which are interconnected by TTTA3- ligands to form three-dimensional frameworks. Unlike most reported MOFs with infinite chains as SBUs, such as well-known MIL-53 and M-MOF-74, which have one-dimensional channels along the chain direction, the BUT-70 series contain two-dimensional intersecting channels. The Brunauer-Emmett-Teller surface area and pore volume of BUT-70A were estimated to be 460 m2 g-1 and 0.18 cm3 g-1, respectively, which are obviously lower than those of BUT-70B (695 m2 g-1 and 0.29 cm3 g-1). Gas adsorption experiments demonstrated that BUT-70A and -70B are able to selectively adsorb C2H2 over CO2 and CH4. At 1 atm and 298 K, BUT-70A uptakes 3.1 mmol g-1 C2H2, which is 3.6 times that of the CO2 uptake and 7.2 times that of the CH4 uptake. Compared with BUT-70A, BUT-70B presents an even higher C2H2 uptake of 3.9 mmol g-1 at the same conditions, but slightly lower Ideal Adsorbed Solution Theory C2H2/CO2 and C2H2/CH4 selectivities.

Abnormal room temperature phosphorescence of purely organic boron-containing compounds: the relationship between the emissive behaviorand the molecular packing, and the potential related applications.

Purely organic materials with the characteristic of room-temperature phosphorescence (RTP) under ambient conditions demonstrate potential benefits in advanced optoelectronic applications. Exploration of versatile and efficient RTP compounds with low prices is full of challenges due to the slow intersystem crossing process and ultrafast deactivation of the active excited states of organic compounds. Here, a series of boron-containing phosphors were found to present RTP with long-lived lifetimes. Among these commercially available and cheap compounds, (4-methoxyphenyl)boronic acid (PBA-MeO) exhibits long-lived RTP, with a lifetime of 2.24 s, which is among the longest lifetimes of single-component small molecules. Our extensive experiments illustrate that both a rigid conformation and expanded conjugation induced by molecular alignment contribute to the persistent RTP. Because of strong intermolecular interactions via hydrogen bonds, these arylboronic acids easily form crystals and are quite appropriate for anti-forgery materials. Subsequently, we develop a precise, speedy and convenient inkjet printing technology for the fabrication of optoelectronic displays. Furthermore, PBA-MeO is used as an additive to feed Bombyx mori silkworms and shows low toxicity over inorganic materials. Our findings may pave a new way for the development of RTP phosphors and promote their use in practical applications.

A Base-Resistant ZnII -Based Metal-Organic Framework: Synthesis, Structure, Postsynthetic Modification, and Gas Adsorption.

A ZnII -based metal-organic framework (MOF), [Zn2 (bdp-CHO)2 ]⋅(DMF)(CH3 CN)(H2 O)2 (BUT-31) is reported that was synthesized by the reaction between a newly designed aldehyde-tagged polypyrazole ligand 2,5-di(1H-pyrazol-4-yl)benzaldehyde (H2 bdp-CHO) and a zinc salt. BUT-31 has a unique pillared layered framework structure with 3D intersecting channels approximately 3.4-5.4 Šin size. Powder X-ray diffraction and N2 adsorption experiments revealed that BUT-31 is rigid and permanently porous with the Brunauer-Emmett-Teller surface area of 926 m2 g-1 . Notably, this MOF tolerates boiling water and even highly basic aqueous solution (4 m sodium hydroxide), although dilute acid gradually decomposes its framework. Owing the permanent porosity and chemical stability of BUT-31, covalent post-modification of the free aldehyde group exposed on the pore surface was accomplished by treating the MOF in a concentrated ammonia solution (25 %) at near room temperature, giving rise to an imine-functionalized analogue of BUT-31. Gas adsorption results show that the aldehyde- and imine-functionalized MOFs have high CO2 adsorption capacities, as well as CO2 /N2 and CO2 /CH4 adsorption selectivities.