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1.
Artículo en Inglés | MEDLINE | ID: mdl-38017017

RESUMEN

Extracellular vesicles (EVs) are emerging as crucial materials for precision theragnostic applications. However, current separation methods are time-consuming, costly, and not scalable and deliver limited yields or purity. Here, we present EV precipitation by ionic strength modulation (ExoPRISM), a simple, low-cost, user-friendly, and readily adaptable approach for separating EVs in high yields without compromising their biological functions. Adding an electrolyte solution to blood plasma in small increments generates the sequential precipitation of proteins and EVs, allowing for fractional separation of EVs using low-speed centrifugation. The coprecipitated electrolytes are easily washed away, and the entire EV separation and washing process takes less than an hour. This approach successfully separates EVs from a broad range of volumes and types of biological fluids, including culture medium, urine, plasma, and serum, showing promise as a robust tool for next-generation liquid biopsies and regenerative medicine.

2.
Anal Bioanal Chem ; 409(12): 3261-3269, 2017 May.
Artículo en Inglés | MEDLINE | ID: mdl-28255921

RESUMEN

Recombinase polymerase amplification (RPA) is an elegant method for the rapid, isothermal amplification of nucleic acids. Here, we elucidate the optimal surface chemistry for rapid and efficient solid-phase RPA, which was fine-tuned in order to obtain a maximum signal-to-noise ratio, defining the optimal DNA probe density, probe-to-lateral spacer ratio (1:0, 1:1, 1:10 and 1:100) and length of a vertical spacer of the probe as well as investigating the effect of different types of lateral spacers. The use of different labelling strategies was also examined in order to reduce the number of steps required for the analysis, using biotin or horseradish peroxidase-labelled reverse primers. Optimisation of the amplification temperature used and the use of surface blocking agents were also pursued. The combination of these changes facilitated a significantly more rapid amplification and detection protocol, with a lowered limit of detection (LOD) of 1 · 10-15 M. The optimised protocol was applied to the detection of Francisella tularensis in real samples from hares and a clear correlation with PCR and qPCR results observed and the solid-phase RPA demonstrated to be capable of detecting 500 fM target DNA in real samples. Graphical abstract Relative size of thiolated lateral spacers tested versus the primer and the uvsx recombinase protein.


Asunto(s)
ADN Bacteriano/genética , Técnicas Electroquímicas/métodos , Francisella tularensis/genética , Técnicas de Amplificación de Ácido Nucleico/métodos , Animales , Sondas de ADN/análisis , Sondas de ADN/genética , ADN Bacteriano/análisis , Francisella tularensis/aislamiento & purificación , Límite de Detección , Modelos Moleculares , Conejos , Recombinasas/química , Relación Señal-Ruido , Tularemia/diagnóstico , Tularemia/microbiología , Tularemia/veterinaria
3.
Anal Bioanal Chem ; 408(30): 8611-8620, 2016 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-27220649

RESUMEN

Electrochemical detection of solid-phase isothermal recombinase polymerase amplification (RPA) of Piscirickettsia salmonis in salmon genomic DNA is reported. The electrochemical biosensor was constructed by surface functionalization of gold electrodes with a thiolated forward primer specific to the genomic region of interest. Solid-phase RPA and primer elongation were achieved in the presence of the specific target sequence and biotinylated reverse primers. The formation of the subsequent surface-tethered duplex amplicons was electrochemically monitored via addition of streptavidin-linked HRP upon completion of solid-phase RPA. Successful quantitative amplification and detection were achieved in less than 1 h at 37 °C, calibrating with PCR-amplified genomic DNA standards and achieving a limit of detection of 5 · 10-8 µg ml-1 (3 · 103 copies in 10 µl). The presented system was applied to the analysis of eight real salmon samples, and the method was also compared to qPCR analysis, observing an excellent degree of correlation. Graphical abstract Schematic of use of electrochemical RPA for detection of Psiricketessia salmonis in salmon liver.


Asunto(s)
ADN Bacteriano/análisis , Técnicas Electroquímicas , Enfermedades de los Peces/diagnóstico , Técnicas de Amplificación de Ácido Nucleico , Piscirickettsia/genética , Infecciones por Piscirickettsiaceae/veterinaria , Animales , Técnicas Biosensibles/instrumentación , Biotinilación , Cartilla de ADN/química , Electrodos , Enzimas Inmovilizadas/química , Enfermedades de los Peces/microbiología , Oro/química , Peroxidasa de Rábano Silvestre/química , Límite de Detección , Piscirickettsia/aislamiento & purificación , Infecciones por Piscirickettsiaceae/diagnóstico , Infecciones por Piscirickettsiaceae/microbiología , Recombinasas/química , Salmón/microbiología
4.
Anal Chim Acta ; 827: 95-102, 2014 May 27.
Artículo en Inglés | MEDLINE | ID: mdl-24833000

RESUMEN

The development of a solid-contact potentiometric sensor based on conducting rubbers using a carbon nanotubes ink is described here. Commercial rubbers are turned into conductive ones by a simple and versatile method, i.e. painting an aqueous dispersion of single-walled carbon nanotubes on the polymer surface. On this substrate, both the working ion-selective electrode and the reference electrode are built in order to form an integrated potentiometric cell. As a proof-of-principle, selective potassium electrodes are fully characterized giving comparable performances to conventional electrodes (sensitivity, selectivity, stability, linear range, limit of detection and reproducibility). As an application of the rubber-based electrodes, a bracelet was constructed to measure potassium levels in artificial sweat. Since rubbers are ubiquitous in our quotidian life, this approach offers great promise for the generation of chemical information through daily objects.


Asunto(s)
Electroquímica/instrumentación , Tinta , Nanotubos de Carbono/química , Goma/química , Conductividad Eléctrica , Potasio/análisis , Potasio/química , Potenciometría , Propiedades de Superficie
5.
Biosens Bioelectron ; 54: 674-8, 2014 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-24334283

RESUMEN

Solid-phase isothermal DNA amplification was performed exploiting the homology protein recombinase A (recA). The system was primarily tested on maleimide activated microtitre plates as a proof-of-concept and later translated to an electrochemical platform. In both cases, forward primer for Francisella tularensis holarctica genomic DNA was surface immobilised via a thiol or an amino moiety and then elongated during the recA mediated amplification, carried out in the presence of specific target sequence and reverse primers. The formation of the subsequent surface tethered amplicons was either colorimetrically or electrochemically monitored using a horseradish peroxidase (HRP)-labelled DNA secondary probe complementary to the elongated strand. The amplification time was optimised to amplify even low amounts of DNA copies in less than an hour at a constant temperature of 37°C, achieving a limit of detection of 1.3×10(-13) M (4×10(6) copies in 50 µL) for the colorimetric assay and 3.3×10(-14) M (2×10(5) copies in 10 µL) for the chronoamperometric assay. The system was demonstrated to be highly specific with negligible cross-reactivity with non-complementary targets or primers.


Asunto(s)
ADN Bacteriano/genética , Francisella tularensis/genética , Reacción en Cadena de la Polimerasa/instrumentación , Secuencia de Bases , Sondas de ADN/genética , ADN Bacteriano/metabolismo , Diseño de Equipo , Humanos , Límite de Detección , Datos de Secuencia Molecular , Reacción en Cadena de la Polimerasa/métodos , Recombinasas/metabolismo , Tularemia/microbiología
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