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1.
J Environ Manage ; 366: 121630, 2024 Jul 09.
Artículo en Inglés | MEDLINE | ID: mdl-38986381

RESUMEN

The coupling of microscale zero-valent iron (mZVI) and anaerobic bacteria (AB) has gained increasing attention due to its ability to enhance dechlorination efficiency by combining the advantages of chemical and microbial reduction. However, the implementation of these coupling technologies at the field scale is challenging in terms of sustainability goals due to the coexistence of various natural electron acceptors in groundwater, which leads to limited electron selectivity and increased secondary risk. Therefore, this study used trichloroethylene (TCE) as a probe contaminant and nitrate (NO3-) as a typical co-occurring natural electron acceptor to optimize the overall sustainable remediation performance of an mZVI/AB coupled system by adjusting the mZVI particle size and dosage. Results revealed that mZVI particles of different sizes exhibit different microorganism activation capabilities. In contrast to its 2 µm and 7 µm counterparts, the 30 µm mZVI/AB system demonstrated a strong dosage-dependency in TCE removal and its product selectivity. Finally, multi-criteria analysis (MCA) methods were established to comprehensively rank the alternatives, and 30 µm mZVI (15 g/L dosage) was determined to be the best remediation strategy with the highest total sustainability score under all studied hydro-chemical conditions when equal weights were applied to technical, environmental, and economic indicators. Our work provides a paradigm for comprehensively assessing the sustainable remediation performance of chlorinated aliphatic hydrocarbons polluted groundwater in practical applications.

2.
Talanta ; 278: 126519, 2024 Jul 08.
Artículo en Inglés | MEDLINE | ID: mdl-39002261

RESUMEN

There is growing interest in developing diamond electrodes with defined geometries such as, for example, micrometer-sized electrode arrays to acquire signals for electroanalysis. For electroanalytical sensing applications, it is essential to achieve precise conductive patterns on the insulating surface. This work provides a novel approach to boron-doped diamond patterning using nichrome masking for selective seeding on an oxidized silicon substrate. The optimized process involves nichrome deposition, sonication, chemical etching, seeding, and tailored chemical vapor deposition of boron-doped diamond with an intrinsic layer to suppress boron diffusion. Through a systematic investigation, it was determined that isolated boron-doped diamond band electrodes can be efficiently produced on non-conductive silica. Additionally, the influence of boron doping on electrochemical performance was studied, with higher doping enhancing the electrochemical response of band electrodes. To demonstrate sensing capabilities, boron-doped diamond bands were used to detect posaconazole, an antifungal drug, exploiting its electroactive behaviour. A linear correlation between posaconazole concentration and oxidation peak current was observed over 1.43 × 10-8 - 5.71 × 10-6 M with a 1.4 × 10-8 M detection limit. The developed boron-doped diamond microbands could significantly impact the field of electroanalysis, facilitating detection of diverse biologically relevant molecules. Overall, this diamond patterning approach overcomes major challenges towards all-diamond electrochemical sensor chips.

3.
MRS Commun ; 14(3): 261-266, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38966401

RESUMEN

Microelectrode arrays (MEAs) have applications in drug discovery, toxicology, and basic research. They measure the electrophysiological response of tissue cultures to quantify changes upon exposure to biochemical stimuli. Unfortunately, manual addition of chemicals introduces significant noise in the recordings. Here, we report a simple-to-fabricate fluidic system that addresses this issue. We show that cell cultures can be successfully established in the fluidic compartment under continuous flow conditions and that the addition of chemicals introduces minimal noise in the recordings. This dynamic cell culture system represents an improvement over traditional tissue culture wells used in MEAs, facilitating electrophysiology measurements.

4.
Sci Total Environ ; 946: 174171, 2024 Oct 10.
Artículo en Inglés | MEDLINE | ID: mdl-38917897

RESUMEN

Despite being one of the most pristine regions in the world, Antarctica is currently also one of the most vulnerable to climate change. Antarctic vegetation comprises mostly lichens and bryophytes, complemented in some milder regions of Maritime Antarctica by two vascular plant species. Shifts in the spatial patterns of these three main vegetation groups have already been observed in response to climate change, highlighting the urgent need for the development of comprehensive large-scale ecological models of the effects of climate change. Besides climate, Antarctic terrestrial vegetation is also strongly influenced by non-climatic microscale conditions related to abiotic and biotic factors. Nevertheless, the quantification of their importance in determining vegetation patterns remains unclear. The objective of this work was to quantify the importance of abiotic and biotic microscale conditions in determining the spatial cover patterns of the major functional types, lichens, vascular plants and bryophytes, explicitly determining the likely confinement of each functional type to the microscale conditions, i.e., their ecological niche. Microscale explained >60 % of the spatial variation of lichens and bryophytes and 30 % of vascular plants, with the niche analysis suggesting that each of the three functional types may be likely confined to specific microscale conditions in the studied gradient. Models indicate that the main microscale ecological filters are abiotic but show the potential benefits of including biotic variables and point to the need for further clarification of vegetation biotic interactions' role in these ecosystems. Altogether, these results point to the need for the inclusion of microscale drivers in ecological models to track and forecast climate change effects, as they are crucial to explain present vegetation patterns in response to climate, and for the interpretation of ecological model results under a climate change perspective.


Asunto(s)
Briófitas , Cambio Climático , Ecosistema , Líquenes , Regiones Antárticas , Líquenes/fisiología , Plantas , Monitoreo del Ambiente
5.
mBio ; 15(7): e0114424, 2024 Jul 17.
Artículo en Inglés | MEDLINE | ID: mdl-38916345

RESUMEN

The cAMP receptor proteins (CRPs) play a critical role in bacterial environmental adaptation by regulating global gene expression levels via cAMP binding. Here, we report the structure of DdrI, a CRP family protein from Deinococcus radiodurans. Combined with biochemical, kinetic, and molecular dynamics simulations analyses, our results indicate that DdrI adopts a DNA-binding conformation in the absence of cAMP and can form stable complexes with the target DNA sequence of classical CRPs. Further analysis revealed that the high-affinity cAMP binding pocket of DdrI is partially filled with Tyr113-Arg55-Glu65 sidechains, mimicking the anti-cAMP-mediated allosteric transition. Moreover, the second syn-cAMP binding site of DdrI at the protein-DNA interface is more negatively charged compared to that of classical CRPs, and manganese ions can enhance its DNA binding affinity. DdrI can also bind to a target sequence that mimics another transcription factor, DdrO, suggesting potential cross-talk between these two transcription factors. These findings reveal a class of CRPs that are independent of cAMP activation and provide valuable insights into the environmental adaptation mechanisms of D. radiodurans.IMPORTANCEBacteria need to respond to environmental changes at the gene transcriptional level, which is critical for their evolution, virulence, and industrial applications. The cAMP receptor protein (CRP) of Escherichia coli (ecCRP) senses changes in intracellular cAMP levels and is a classic example of allosteric effects in textbooks. However, the structures and biochemical activities of CRPs are not generally conserved and there exist different mechanisms. In this study, we found that the proposed CRP from Deinococcus radiodurans, DdrI, exhibited DNA binding ability independent of cAMP binding and adopted an apo structure resembling the activated CRP. Manganese can enhance the DNA binding of DdrI while allowing some degree of freedom for its target sequence. These results suggest that CRPs can evolve to become a class of cAMP-independent global regulators, enabling bacteria to adapt to different environments according to their characteristics. The first-discovered CRP family member, ecCRP (or CAP) may well not be typical of the family and be very different to the ancestral CRP-family transcription factor.


Asunto(s)
Proteínas Bacterianas , Proteína Receptora de AMP Cíclico , AMP Cíclico , Deinococcus , Unión Proteica , Deinococcus/genética , Deinococcus/metabolismo , Proteína Receptora de AMP Cíclico/metabolismo , Proteína Receptora de AMP Cíclico/genética , Proteína Receptora de AMP Cíclico/química , Proteínas Bacterianas/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/química , AMP Cíclico/metabolismo , Sitios de Unión , ADN Bacteriano/genética , ADN Bacteriano/metabolismo , Simulación de Dinámica Molecular , Conformación Proteica , Proteínas de Unión al ADN/metabolismo , Proteínas de Unión al ADN/genética , Proteínas de Unión al ADN/química , Regulación Bacteriana de la Expresión Génica
6.
Biosensors (Basel) ; 14(6)2024 May 23.
Artículo en Inglés | MEDLINE | ID: mdl-38920570

RESUMEN

Blood tests are widely used in modern medicine to diagnose certain illnesses and evaluate the overall health of a patient. To enable testing in resource-limited areas, there has been increasing interest in point-of-care (PoC) testing devices. To process blood samples, liquid mixing with active pumps is usually required, making PoC blood testing expensive and bulky. We explored the possibility of processing approximately 2 µL of whole blood for image flow cytometry using capillary structures that allowed test times of a few minutes without active pumps. Capillary pump structures with five different pillar shapes were simulated using Ansys Fluent to determine which resulted in the fastest whole blood uptake. The simulation results showed a strong influence of the capillary pump pillar shape on the chip filling time. Long and thin structures with a high aspect ratio exhibited faster filling times. Microfluidic chips using the simulated pump design with the most efficient blood uptake were fabricated with polydimethylsiloxane (PDMS) and polyethylene oxide (PEO). The chip filling times were tested with 2 µL of both water and whole blood, resulting in uptake times of 24 s for water and 111 s for blood. The simulated blood plasma results deviated from the experimental filling times by about 35% without accounting for any cell-induced effects. By comparing the flow speed induced by different pump pillar geometries, this study offers insights for the design and optimization of passive microfluidic devices for inhomogenous liquids such as whole blood in sensing applications.


Asunto(s)
Microfluídica , Sistemas de Atención de Punto , Humanos , Técnicas Biosensibles , Dimetilpolisiloxanos , Dispositivos Laboratorio en un Chip , Técnicas Analíticas Microfluídicas , Citometría de Flujo
7.
Sci Total Environ ; 937: 173597, 2024 Aug 10.
Artículo en Inglés | MEDLINE | ID: mdl-38810741

RESUMEN

Microfluidics, also called lab-on-a-chip, represents an emerging research platform that permits more precise and manipulation of samples at the microscale or even down to the nanoscale (nanofluidic) including picoliter droplets, microparticles, and microbes within miniaturized and highly integrated devices. This groundbreaking technology has made significant strides across multiple disciplines by providing an unprecedented view of physical, chemical, and biological events, fostering a holistic and an in-depth understanding of complex systems. The application of microfluidics to address the challenges in environmental science is likely to contribute to our better understanding, however, it's not yet fully developed. To raise researchers' interest, this discussion first delineates the valuable and underutilized environmental applications of microfluidic technology, ranging from environmental surveillance to acting as microreactors for investigating interfacial dynamic processes, and facilitating high-throughput bioassays. We highlight, with examples, how rationally designed microfluidic devices lead to new insights into the advancement of environmental science and technology. We then critically review the key challenges that hinder the practical adoption of microfluidic technologies. Specifically, we discuss the extent to which microfluidics accurately reflect realistic environmental scenarios, outline the areas to be improved, and propose strategies to overcome bottlenecks that impede the broad application of microfluidics. We also envision new opportunities and future research directions, aiming to provide guidelines for the broader utilization of microfluidics in environmental studies.


Asunto(s)
Ciencia Ambiental , Microfluídica , Microfluídica/métodos , Monitoreo del Ambiente/métodos , Dispositivos Laboratorio en un Chip
8.
Int J Biol Macromol ; 271(Pt 1): 132510, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38821797

RESUMEN

Gum Arabic underwent enzymatic modification with curcumin oxidation products, prompting self-assembly in water at lower concentrations than native gum Arabic, which was fully soluble. The resulting particles displayed a narrow size distribution, suggestive of a micellization mechanism akin to Critical Micellization Concentration (CMC) in surfactants or Critical Aggregation Concentration (CAC) in polymers. Accurately determining CAC is vital for utilizing polymers in molecule encapsulation, but precise measurement is challenging, requiring multiple techniques. Initially, CAC was probed via turbidity measurements, dynamic light scattering (DLS), and isothermal calorimetric titration (ITC), yielding a range of 0.0015 to 0.01 %. Micro-scale thermophoresis (MST) was then employed for the first time to define CAC more precisely, facilitated by the intrinsic fluorescence of modified gum Arabic. Using MST, CAC was pinpointed at 0.001 % (w/v), a novel approach. Furthermore, MST revealed a low EC50 value of 0.007 % (w/t) for self-assembly, signifying uniformity among GAC sub-units and assembly stability upon dilution.


Asunto(s)
Curcumina , Goma Arábiga , Oxidación-Reducción , Agua , Goma Arábiga/química , Curcumina/química , Agua/química , Micelas
9.
ACS Appl Mater Interfaces ; 16(21): 27596-27604, 2024 May 29.
Artículo en Inglés | MEDLINE | ID: mdl-38760008

RESUMEN

Carbon nanotube (CNT) films are extensively researched as a promising material for wearable thermoelectric generators (TEGs) owing to their good flexibility and high thermoelectric conversion ability. Miniaturizing a pair of p- and n-type thermocouples and increasing the number of repeating elements can effectively increase the power of TEGs. However, conventional p-n patterning methods, such as dipping and printing, have a coarse resolution at the submillimeter level, thereby limiting the miniaturization rate. This study developed an aerosol doping system as a fine n-doping method. A dopant aerosol with a <3 µm diameter was formed through ultrasonic nebulization and air separation, while n-doping was achieved by exposing the CNT film to the dopant aerosol. Microscale p-n patterning of 1 µm was achieved through exposure using small-sized aerosols at an exceptionally slow rate of 3 Å/min. This resolution is 100 times higher than those of conventional p-n patterning methods. The developed aerosol doping system for CNTs can also be used on organic semiconductor materials, such as PEDOT/PSS and perovskite materials. Therefore, it has the potential to significantly impact the realization of Internet of Things (IoT) terminals, such as flexible TEGs, transistors, and solar cells.

10.
J Biol Chem ; 300(6): 107396, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38777142

RESUMEN

Fatty acid binding proteins (FABPs) are a family of amphiphilic transport proteins with high diversity in terms of their amino acid sequences and binding preferences. Beyond their main biological role as cytosolic fatty acid transporters, many aspects regarding their binding mechanism and functional specializations in human cells remain unclear. In this work, the binding properties and thermodynamics of FABP3, FABP4, and FABP5 were analyzed under various physical conditions. For this purpose, the FABPs were loaded with fatty acids bearing fluorescence or spin probes as model ligands, comparing their binding affinities via microscale thermophoresis (MST) and continuous-wave electron paramagnetic resonance (CW EPR) spectroscopy. The CW EPR spectra of non-covalently bound 5- and 16-DOXYL stearic acid (5/16-DSA) deliver in-depth information about the dynamics and chemical environments of ligands inside the binding pockets of the FABPs. EPR spectral simulations allow the construction of binding curves, revealing two different binding states ('intermediately' and 'strongly' bound). The proportion of bound 5/16-DSA depends strongly on the FABP concentration and the temperature but with remarkable differences between the three isoforms. Additionally, the more dynamic state ('intermediately bound') seems to dominate at body temperature with thermodynamic preference. The ligand binding studies were supplemented by aggregation studies via dynamic light scattering and bioinformatic analyses. Beyond the remarkably fine-tuned binding properties exhibited by each FABP, which were discernible with our EPR-centered approach, the results of this work attest to the power of simple spectroscopic experiments to provide new insights into the ligand binding mechanisms of proteins in general on a molecular level.


Asunto(s)
Proteína 3 de Unión a Ácidos Grasos , Proteínas de Unión a Ácidos Grasos , Unión Proteica , Proteínas de Unión a Ácidos Grasos/metabolismo , Proteínas de Unión a Ácidos Grasos/química , Humanos , Proteína 3 de Unión a Ácidos Grasos/metabolismo , Proteína 3 de Unión a Ácidos Grasos/química , Espectroscopía de Resonancia por Spin del Electrón , Ligandos , Termodinámica , Ácidos Grasos/metabolismo , Ácidos Grasos/química , Sitios de Unión
11.
Micromachines (Basel) ; 15(5)2024 May 08.
Artículo en Inglés | MEDLINE | ID: mdl-38793202

RESUMEN

Micro-scale positioning techniques have become essential in numerous engineering systems. In the field of fluid mechanics, particle tracking velocimetry (PTV) stands out as a key method for tracking individual particles and reconstructing flow fields. Here, we present an overview of the micro-scale particle tracking methodologies that are predominantly employed for particle detection and flow field reconstruction. It covers various methods, including conventional and data-driven techniques. The advanced techniques, which combine developments in microscopy, photography, image processing, computer vision, and artificial intelligence, are making significant strides and will greatly benefit a wide range of scientific and engineering fields.

12.
Materials (Basel) ; 17(10)2024 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-38793309

RESUMEN

Large-Scale Material Extrusion (LS-MEX) is increasingly being used in small-scale production and prototyping due to its ability to create components in new temporal and spatial dimensions. However, the use of this manufacturing process poses microscopic and macroscopic challenges not encountered in previous small-scale production systems. These challenges arise primarily from the prolonged retention of heat in the material, which leads to insufficient strength in the extruded strands at the macrostructural level. As a result, the component can collapse, a phenomenon known as 'slumping'. Thermal energy also influences microstructural changes, such as crystallisation kinetics, which affect properties such as the strength and stiffness of the final product. The duration and dynamics of thermal energy are influenced by manufacturing parameters and the possible use of additional peripheral equipment, which affects component quality. In this study, the influence of thermal energy on structural processes through simulations of polyamide 6 with 40% carbon fibres (PA6 wt.%40 CF) is investigated. The results show that by adjusting the process parameters and using modification units, the thermal profile of the material can be accurately controlled, which allows the microstructural processes to be precisely controlled. This leads to the targeted modification of the macroscopic material properties. The focus of this work is on the combination of numerical simulations of the LS-MEX process with semi-empirical methods for the analysis of crystallisation processes. The application of the Nakamura model, which is used throughout similar investigations, allows a detailed description and prediction of the crystallisation kinetics during the manufacturing process. The study shows that the absolute degree of crystallisation can be determined with simplified assumptions using a combination of thermal simulations and semi-empirical approaches. It was found that the absolute degree of crystallisation increases from the outer interface of the strand to the print bed across the cross-section. This can be attributed to the specific thermal boundary conditions and the resulting temperature profiles at different points.

13.
J Phycol ; 2024 May 29.
Artículo en Inglés | MEDLINE | ID: mdl-38810139

RESUMEN

Phytoplankton cells are now recognized as dynamic entities rather than as passive and isolated particles because they can actively modulate impacts of selection factors (nutrients, light, turbidity, and mixing) through a wide range of adaptations. Cell shape and/or chain length modulation is one of these processes but has predominantly been studied as an adaptation or an acclimatation to a specific growth limitation (light, nutrients, predation, etc.). In this study we have demonstrated that cell shape and size may have greater roles than previously known in phytoplankton ecology and species adaptation by permitting cell-to-cell signaling and more complex ecological processes that result from it. By exploring microscale biophysical interactions that lead to specific cell reorientation processes, we demonstrated that cell geometry not only modulates cell sinking rates but can also provide fast sensor responses to the cells' environment. Although gyrotaxis has been described in detail for motile phytoplankton cells, our findings illustrate that the reorientation process described here can occur even in non-motile cells within their natural environment. An additional consistent behavior was also recently described for a diatom species (Pseudo-nitzschia delicatessima), and with this study, we extend this observation to Pseudo-nitzschia pungens and Pseudo-nitzschia fraudulenta. Our observations emphasize the generality of this process, which adds a new level of complexity to our understanding of cellular interactions and their network of sensors.

14.
Sci Rep ; 14(1): 10298, 2024 May 04.
Artículo en Inglés | MEDLINE | ID: mdl-38704443

RESUMEN

This paper provides the first observational analysis of how droplet separation is impacted by the flinging action of microscale vortices in turbulent clouds over a select radii range and how they vary over cloud cores and along the peripheral edges. It is premised that this mechanism initiates droplet separation within a cloud volume soon after condensational growth, largely in the cloud core, and operates until the cloud droplet radii exceed 20-30 µm when this effect fades rapidly. New observations are presented showing how microscale vortices also impact the settling rates of droplets over a critical size range (6-18 µm) causing them to sediment faster than in still air affecting swept volumes and thereby impacting the rain initiation and formation. Large-scale atmospheric models ignore these microscale effects linked to rapid droplet growth during the early stages of cloud conversion. Previous studies on droplet spatial organization along the cloud edges and inside the deep core have shown that homogeneous Poisson statistics, indicative of the presence of a vigorous in-cloud mixing process at small scales obtained, in contrast to an inhomogeneous distribution along the edges. In this paper, it is established that this marked core region, homogeneity can be linked to microscale vortical activity which flings cloud droplets in the range of 6-18 µm outward. The typical radius of the droplet trajectories or the droplet flung radii around the vortices correlates with the interparticle distance strongly. The correlation starts to diminish as one proceeds from the central core to the cloud fringes because of the added entrainment of cloud-free air. These first results imply that droplet growth in the core is first augmented with this small-scale interaction prior to other more large-scale processes involving entrainment mixing. This first study, combining these amplified velocities are included in a Weather Research and Forecasting- LES case study. Not only are significant differences observed in the cloud morphology when compared to a baseline case, but the 'enhanced' case also shows early commencement of rainfall along with intense precipitation activity compared to the 'standard' baseline case. It is also shown that the modelled equilibrium raindrop spectrum agrees better with observations when the enhanced droplet sedimentation rates mediated by microscale vortices are included in the calculations compared to the case where only still-air terminal velocities are used.

15.
Heliyon ; 10(9): e30678, 2024 May 15.
Artículo en Inglés | MEDLINE | ID: mdl-38765127

RESUMEN

Cellular Automaton (CA) is widely used because of its ability to simulate complex spatiotemporal dynamic processes through applying simple rules. The basis of the CA model is the definition of transformation rules. During a simulation process, the rules determine the change of the cell state. However, existing processing methods calculate the driving factors based on single-point time (start time or end time), making it difficult to reflect the fact that numerous driving factors affecting the cell conversion dynamically change with time. Based on the time dynamics perspective and the data set of multiple time series, this paper designs a method of dynamic adjustment of driving factors of urban expansion on the local cell-scale. It uses linear, exponential, logarithmic, and polynomial fitting to develop a CA model of dynamic adjustment that conforms to the characteristics of local spatial evolution. The main conclusions of the paper are as follows: (1) The polynomial fitting has the highest average R2, indicating that the driving factors experiences large fluctuations over time; (2) Secondly, the simulation result kappa obtained by the four fitting methods is between 0.781-0.810, which is higher than the simulation accuracy obtained by using only a single time point. In other words, the factor does not dynamically fit with time and (3) The fitting accuracy of road density is a key indicator of correct and incorrect simulation parts of construction land. Our results demonstrate that the precision of the CA model may be significantly improved by capturing the time development law of environmental variables affecting urban development at the micro-scale.

16.
Biodivers Data J ; 12: e121454, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38617835

RESUMEN

Background: The Potamophylaxwinneguthi species cluster comprises species with limited distribution, currently documented from Kosovo, Serbia, Bosnia and Herzegovina and Bulgaria. New information: In this paper, we describe a new species, Potamophylaxkosovaensis sp. nov., discovered in two tributaries of the Ibër River Basin, within the Kopaonik Mountains of the Republic of Kosovo. Morphologically, males of this species closely resemble those of P.idliri Ibrahimi, Bilalli & Kucinic, 2022 from Serbia's Jastrebac Mountain and P.humoinsapiens Ibrahimi & Bilalli, 2023 from the Sharr Mountains in the Republic of Kosovo. However, the new species can be distinguished by its smaller aedeagus, thicker and differently-shaped parameres, as well as distinctive patterns and elongated spines on the parameres. Notably, this species is restricted to spring areas, indicating sensitivity to water pollution and habitat degradation. Additionally, we provide a list of caddisfly species found in sympatry with the new species.Potamophylaxkosovaensis sp. nov. is the third known species within the Potamophylaxwinneguthi species cluster, identified in the Republic of Kosovo.

17.
Biotechnol Prog ; : e3476, 2024 Apr 30.
Artículo en Inglés | MEDLINE | ID: mdl-38687144

RESUMEN

High throughput process development (HTPD) is established for time- and resource- efficient chromatographic process development. However, integration with non-chromatographic operations within a monoclonal antibody (mAb) purification train is less developed. An area of importance is the development of low pH viral inactivation (VI) that follows protein A chromatography. However, the lack of pH measurement devices at the micro-scale represents a barrier to implementation, which prevents integration with the surrounding unit operations, limiting overall process knowledge. This study is based upon the design and testing of a HTPD platform for integration of the protein A and low pH VI operations. This was achieved by using a design and simulation software before execution on an automated liquid handler. The operations were successfully translated to the micro-scale, as assessed by analysis of recoveries and molecular weight content. The integrated platform was then used as a tool to assess the effect of pH on HMWC during low pH hold. The laboratory-scale and micro-scale elution pools showed comparable HMWC across the pH range 3.2-3.7. The investigative power of the platform is highlighted by evaluating the resources required to conduct a hypothetical experiment. This results in lower resource demands and increased labor efficiency relative to the laboratory-scale. For example, the experiment can be conducted in 7 h, compared to 105 h, translating to labor hours, 3 h and 28 h for the micro-scale and laboratory-scale, respectively. This presents the opportunity for further integration beyond chromatographic operations within the purification sequence, to establish a fit-to-platform assessment tool for mAb process development.

18.
Microb Cell Fact ; 23(1): 112, 2024 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-38622596

RESUMEN

BACKGROUND: Filamentous fungi have long been recognized for their exceptional enzyme production capabilities. Among these, Trichoderma reesei has emerged as a key producer of various industrially relevant enzymes and is particularly known for the production of cellulases. Despite the availability of advanced gene editing techniques for T. reesei, the cultivation and characterization of resulting strain libraries remain challenging, necessitating well-defined and controlled conditions with higher throughput. Small-scale cultivation devices are popular for screening bacterial strain libraries. However, their current use for filamentous fungi is limited due to their complex morphology. RESULTS: This study addresses this research gap through the development of a batch cultivation protocol using a microbioreactor for cellulase-producing T. reesei strains (wild type, RutC30 and RutC30 TR3158) with offline cellulase activity analysis. Additionally, the feasibility of a microscale fed-batch cultivation workflow is explored, crucial for mimicking industrial cellulase production conditions. A batch cultivation protocol was developed and validated using the BioLector microbioreactor, a Round Well Plate, adapted medium and a shaking frequency of 1000 rpm. A strong correlation between scattered light intensity and cell dry weight underscores the reliability of this method in reflecting fungal biomass formation, even in the context of complex fungal morphology. Building on the batch results, a fed-batch strategy was established for T. reesei RutC30. Starting with a glucose concentration of 2.5 g l - 1 in the batch phase, we introduced a dual-purpose lactose feed to induce cellulase production and prevent carbon catabolite repression. Investigating lactose feeding rates from 0.3 to 0.75 g (l h) - 1 , the lowest rate of 0.3 g (l h) - 1 revealed a threefold increase in cellobiohydrolase and a fivefold increase in ß -glucosidase activity compared to batch processes using the same type and amount of carbon sources. CONCLUSION: We successfully established a robust microbioreactor batch cultivation protocol for T. reesei wild type, RutC30 and RutC30 TR3158, overcoming challenges associated with complex fungal morphologies. The study highlights the effectiveness of microbioreactor workflows in optimizing cellulase production with T. reesei, providing a valuable tool for simultaneous assessment of critical bioprocess parameters and facilitating efficient strain screening. The findings underscore the potential of microscale fed-batch strategies for enhancing enzyme production capabilities, revealing insights for future industrial applications in biotechnology.


Asunto(s)
Celulasa , Hypocreales , Trichoderma , Celulasa/metabolismo , Lactosa/metabolismo , Reproducibilidad de los Resultados , Biotecnología , Trichoderma/metabolismo
19.
Lasers Med Sci ; 39(1): 112, 2024 Apr 24.
Artículo en Inglés | MEDLINE | ID: mdl-38656634

RESUMEN

PURPOSE: To measure the dynamic characteristics of the flow field in a complex root canal model activated by two laser-activated irrigation (LAI) modalities at different activation energy outputs: photon-induced photoacoustic streaming (PIPS) and microshort pulse (MSP). METHODS: A phase-locked micro-scale Particle Image Velocimetry (µPIV) system was employed to characterise the temporal variations of LAI-induced velocity fields in the root canal following a single laser pulse. The wall shear stress (WSS) in the lateral root canal was subsequently estimated from the phase-averaged velocity fields. RESULTS: Both PIPS and MSP were able to generate the 'breath mode' of the irrigant current under all tested conditions. The transient irrigation flush in the root canal peaked at speeds close to 6 m/s. However, this intense flushing effect persisted for only about 2000 µs (or 3% of a single laser-pulse activation cycle). For MSP, the maximum WSS magnitude was approximately 3.08 Pa at an activation energy of E = 20 mJ/pulse, rising to 9.01 Pa at E = 50 mJ/pulse. In comparison, PIPS elevated the WSS to 10.63 Pa at E = 20 mJ/pulse. CONCLUSION: Elevating the activation energy can boost the peak flushing velocity and the maximum WSS, thereby enhancing irrigation efficiency. Given the same activation energy, PIPS outperforms MSP. Additionally, increasing the activation frequency may be an effective strategy to improve irrigation performance further.


Asunto(s)
Reología , Humanos , Cavidad Pulpar/efectos de la radiación , Irrigación Terapéutica/métodos , Irrigación Terapéutica/instrumentación , Rayos Láser , Irrigantes del Conducto Radicular , Técnicas Fotoacústicas/métodos , Preparación del Conducto Radicular/métodos , Preparación del Conducto Radicular/instrumentación
20.
Int J Adv Manuf Technol ; 131(7-8): 3631-3649, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38549866

RESUMEN

Precise tooling is vital for defect-free production of micro injection moulded (µ-IM) or hot-embossed products. The demoulding stage of such moulding and forming processes poses a serious challenge to the integrity of thin miniature features because of friction, adhesion, and thermal stresses. Typically, micro moulds involve geometrically textured patterns or features such as linear ridges, pillars, channels, and holes, the characteristic dimensions of which range from 10 to 300 µm. Realistically complex mould designs, containing precision micro features (enhanced fillet radius and positive draft angle) and high surface quality, are presented in this work. Electropolishing based on forward pulse currents (PC) has been used to shape and polish Ni micro moulds that contain sets of micron-scaled linear ridges and star patterns in order to ease the separation of moulded polymeric parts from the metallic mould during ejection and demoulding. The use of forward pulsed currents improved the mould design by increasing the fillet radii and draft angle while keeping the surface roughness low and maintaining a good surface shine. An optimization study of forward PC using a green solution of nickel sulfamate varied EP times (0-70 min) and duty cycles (40, 50, 60, and 70%) at a process conditions of 2.8 V, 50 °C, and 250 rpm. The best topographical and morphological changes were observed for a typical microfluidic channel (w × h, 100 × 110 µm) with an EP time of 70 min and 50% duty cycle: fillet radius increased by 3.8 µm, draft angle by 3.3°, and the channel width reduced by 11.4% while surface roughness changed by 8.6% and surface shine improved by 48.9%. Experimental validation was performed using hot embossing wherein the electropolished Ni mould replicated the micro channels and star patterns in PMMA chips with notably fewer burrs, material pile up, and no feature distortion. Moreover, there was a reduction in the side wall roughness of micro channels in PDMS casting with electropolished Ni mould by 16%. Hence, this work presents a significant scientific contribution to improving the efficiency of micro mould tools and reduces the defects caused by friction and adhesion in replicated polymeric parts.

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