Analysis of subcellular energy metabolism in five Lacertidae lizards across varied environmental conditions.

Aerobic respiration is the main energy source for most eukaryotes, and efficient mitochondrial energy transfer greatly influences organismal fitness. To survive environmental changes, cells have evolved to adjust their biochemistry. Thus, measuring energy metabolism at the subcellular level can enhance our understanding of individual performance, population dynamics, and species distribution ranges. We investigated three important metabolic traits at the subcellular level in five lacertid lizard species sampled from different elevations, from sea level up to 2000 m. We examined hemoglobin concentration, two markers of oxidative stress (catalase activity and carbonyl concentration) and maximum rate of metabolic respiration at the subcellular level (potential metabolic activity at the electron transport system). The traits were analysed in laboratory acclimated adult male lizards to investigate the adaptive metabolic responses to the variable environmental conditions at the local sampling sites. Potential metabolic activity at the cellular level was measured at four temperatures - 28 °C, 30 °C, 32 °C and 34 °C - covering the range of preferred body temperatures of the species studied. Hemoglobin content, carbonyl concentration and potential metabolic activity did not differ significantly among species. Interspecific differences were found in the catalase activity, Potential metabolic activity increased with temperature in parallel in all five species. The highest response of the metabolic rate with temperature (Q10) and Arrhenius activation energy (Ea) was recorded in the high-mountain species Iberolacerta monticola.

Influence of surface water and groundwater on functional traits and trade-off strategies of oasis communities at the end of the Keriya River, China.

Plant functional traits reflect the capacity of plants to adapt to their environment and the underlying optimization mechanisms. However, few studies have investigated trade-off strategies for functional traits in desert-wetland ecosystems, the mechanisms by which surface water disturbance and groundwater depth drive functional trait variation at the community scale, and the roles of intraspecific and interspecific variation. Therefore, this study analyzed specific differences in community-weighted mean traits among habitat types and obtained the relative contribution of intraspecific and interspecific variation by decomposing community-weighted mean traits, focusing on the Daliyabuyi Oasis in the hinterland of the Taklamakan Desert. We also explored the mechanisms by which surface water and groundwater influence different sources of variability specifically. The results showed that plant height, relative chlorophyll content, leaf thickness, leaf nitrogen content, and nitrogen-phosphorus ratio were the key traits reflecting habitat differences. As the groundwater depth becomes shallower and surface water disturbance intensifies, plant communities tend to have higher leaf nitrogen content, nitrogen-phosphorus ratio, and relative chlorophyll content and lower height. Surface water, groundwater, soil water content, and total soil nitrogen can influence interspecific and intraspecific variation in these traits through direct and indirect effects. As arid to wet habitats change, plant trade-off strategies for resources will shift from conservative to acquisitive. The study concluded that community functional traits are mainly contributed by interspecific variation, but consideration of intraspecific variation and the covariation effects that exist between it and interspecific variation can help to further enhance the understanding of the response of community traits in desert-wetland ecosystems to environmental change. Surface water disturbance has a non-negligible contribution to this adaptation process and plays a higher role than groundwater depth.

Inter- and intraspecific diversity of Salix bark phenolic profiles - A resource for the pharmaceutical industry.

Due to their content of phenolic compounds, willow bark preparations are used as an herbal remedy. The large diversity of phenolic secondary metabolites in Salix still provides a resource for the identification of bioactive compounds in particular species, including species not yet in focus from a phytopharmaceutical perspective. The present study describes the bark phenolic profile of 13 Salix species analyzed by HPLC-MS: Salix alba, Salix babylonica, Salix daphnoides, Salix fragilis, Salix hastata, Salix myrsinifolia, Salix pentandra, Salix purpurea, Salix repens (including subspecies S. repens ssp. arenaria and S. repens ssp. repens), Salix rosmarinifolia, Salix sachalinensis, Salix triandra and Salix viminalis. The analyzed profiles comprised the chemical groups of salicylates, flavonoids, procyanidins, phenolic acid derivatives, and some unclassified phenolics. Particular compounds were detected in species where they have not been previously reported. Apart from interspecific diversity, qualitative variability within species was observed as certain components were detected only in some of the analyzed genotypes. The knowledge on specific phenolic profiles of species and genotypes is the basis for the selection of suitable willow bark material with certain desired bioactive properties. Furthermore, the high inter- and intraspecific variability points out the necessity for product standardization of willow bark raw material.

Variation in Seed Dormancy of Chaco Seasonally Dry Forest Species: Effects of Seed Traits and Population Environmental Conditions.

The persistence of subtropical seasonally dry forests urgently requires the implementation of ex situ conservation and restoration programs. We studied variation in seed traits and dormancy of six native species growing in seasonally dry Chaco forests of Argentina. We documented high intra- and interspecific variability in seed traits and dormancy. Fresh seeds of Geoffroea decorticans and Parasenegalia visco (Fabaceae) were water-permeable and nondormant (ND), while those of Parkinsonia praecox and Vachellia aroma (Fabaceae) were water-impermeable and had physical dormancy (PY). Seeds of Schnopsis lorentzii (Anacardiaceae) and Sarcomphalus mistol (Rhamnaceae) were water-permeable and had physiological dormancy (PD). Mechanical and chemical scarification were the most effective methods to break PY, and dry storage for 3 months was effective in breaking PD. Seeds of large-seeded species were ND or had PD, and those of small-seeded species had PY. Species inhabiting moist habitats had ND seeds, whereas those from seasonally dry habitats had seeds with PY or PD. These results suggest that seed traits and dormancy are species-specific and that intraspecific variation in seed traits is likely associated with high phenotypic plasticity of species in response to local environmental heterogeneity. These findings should be considered at the time of implementation of conservation techniques and for seed sourcing decisions for restoration.

Large-scale spatial variability in urban tolerance of birds.

Quantifying intraspecific and interspecific trait variability is critical to our understanding of biogeography, ecology and conservation. But quantifying such variability and understanding the importance of intraspecific and interspecific variability remain challenging. This is especially true of large geographic scales as this is where the differences between intraspecific and interspecific variability are likely to be greatest. Our goal is to address this research gap using broad-scale citizen science data to quantify intraspecific variability and compare it with interspecific variability, using the example of bird responses to urbanization across the continental United States. Using more than 100 million observations, we quantified urban tolerance for 338 species within randomly sampled spatial regions and then calculated the standard deviation of each species' urban tolerance. We found that species' spatial variability in urban tolerance (i.e. standard deviation) was largely explained by the variability of urban cover throughout a species' range (R2  = 0.70). Variability in urban tolerance was greater in species that were more tolerant of urban cover (i.e. the average urban tolerance throughout their range), suggesting that generalist life histories are better suited to adapt to novel anthropogenic environments. Overall, species differences explained most of the variability in urban tolerance across spatial regions. Together, our results indicate that (1) intraspecific variability is largely predicted by local environmental variability in urban cover at a large spatial scale and (2) interspecific variability is greater than intraspecific variability, supporting the common use of mean values (i.e. collapsing observations across a species' range) when assessing species-environment relationships. Further studies, across different taxa, traits and species-environment relationships are needed to test the role of intraspecific variability, but nevertheless, we recommend that when possible, ecologists should avoid using discrete categories to classify species in how they respond to the environment.

CO2 -responsiveness of leaf isoprene emission: Why do species differ?

Leaf isoprene emission rate, I, decreases with increasing atmospheric CO2 concentration with major implications for global change. There is a significant interspecific variability in [CO2 ]-responsiveness of I, but the extent of this variation is unknown and its reasons are not understood. We hypothesized that the magnitude of emission reduction reflects the size and changeability of precursor pools responsible for isoprene emission (dimethylallyl diphosphate, DMADP and 2-methyl-erythritol 2,4-cyclodiphosphate, MEcDP). Changes in I and intermediate pool sizes upon increase of [CO2 ] from 400 to 1500 µmol/mol were studied in nine woody species spanning boreal to tropical ecosystems. I varied 10-fold, total substrate pool size 37-fold and the ratio of DMADP/MEcDP pool sizes 57-fold. At higher [CO2 ], I was reduced on average by 65%, but [CO2 ]-responsiveness varied an order of magnitude across species. The increase in [CO2 ] resulted in concomitant reductions in both substrate pools. The variation in [CO2 ]-responsiveness across species scaled with the reduction in pool sizes, the substrate pool size supported and the share of DMADP in total substrate pool. This study highlights a major interspecific variation in [CO2 ]-responsiveness of isoprene emission and conclusively links this variation to interspecific variability in [CO2 ] effects on substrate availability and intermediate pool size.

Cytogenomics of Deschampsia P. Beauv. (Poaceae) Species Based on Sequence Analyses and FISH Mapping of CON/COM Satellite DNA Families.

The genus Deschampsia P. Beauv. (Poaceae) involves a group of widespread polymorphic species, and many of them are highly tolerant to stressful environmental conditions. Genome diversity and chromosomal phylogeny within the genus are still insufficiently studied. Satellite DNAs, including CON/COM families, are the main components of the plant repeatome, which contribute to chromosome organization. For the first time, using PCR-based (Polymerase Chain Reaction) techniques and sequential BLAST (Basic Local Alignment Search Tool) and MSA (Multiple Sequence Alignment) analyses, we identified and classified CON/COM repeats in genomes of eleven Deschampsia accessions and three accessions from related genera. High homology of CON/COM sequences were revealed in the studied species though differences in single-nucleotide alteration profiles detected in homologous CON/COM regions indicated that they tended to diverge independently. The performed chromosome mapping of 45S rDNA, 5S rDNA, and CON/COM repeats in six Deschampsia species demonstrated interspecific variability in localization of these cytogenetic markers and facilitated the identification of different chromosomal rearrangements. Based on the obtained data, the studied Deschampsia species were distinguished into karyological groups, and MSA-based schematic trees were built, which could clarify the relationships within the genus. Our findings can be useful for further genetic and phylogenetic studies.

Morphological divergences as drivers of diet segregation between two sympatric species of Serrapinnus (Characidae: Cheirodontinae) in macrophyte stands in a neotropical floodplain lake

Diet and morphology of Serrapinnus notomelas and Serrapinnus sp.1 were investigated across ontogeny, as a way to elucidate the key elements linked to the resource partitioning (a main driver for species coexistence). Fish sampling was conducted monthly between October 2010 and March 2012. Individuals were captured, identified, and classified into juvenile or adult. Our results show ontogenetic and interspecific differences in feeding abilities and morphological traits. Differences in body shape (relative area of the dorsal fin, length of head, height of the caudal peduncle, the aspect ratio of the pectoral and pelvic fin) favored divergent swimming performances (more maneuverability in S. notomelas and continuous swimming to Serrapinnus sp.1). We also observed divergences in trophic apparatus traits and correlations with different diets. In this context, it is highlighted that understanding the relationship between morphology and diet can assist in elucidating the processes that permeate the coexistence between sympatric species, and between ontogenetic periods. Besides, the relevant contribution of the measures of the trophic apparatus (gill raker length, the number of teeth cuspids, and intestinal coefficient) in trophic segregation seems to be a strong evidence in favor of the proposed discriminatory and predictive capacities of these traits.(AU)

Dieta e morfologia de Serrapinnus notomelas e Serrapinnus sp.1 foram investigadas ao longo da ontogenia, como forma de elucidar os principais elementos ligados à partição de recursos (principal fator para a coexistência entre espécies). Foram realizadas coletas de peixes mensalmente entre outubro de 2010 e março de 2012. Os indivíduos foram capturados, identificados e classificados em juvenis ou adultos. Nossos resultados mostram diferenças ontogenéticas e interespecíficas na alimentação e características morfológicas. Diferenças na forma corporal (área da nadadeira dorsal, comprimento da cabeça, altura do pedúnculo caudal, proporção das nadadeiras peitorais e pélvicas) favoreceram desempenhos de natação divergentes (maior manobrabilidade para S. notomelas e natação contínua para Serrapinnus sp.1). Também observamos divergências nas características do aparato trófico e correlações com diferentes dietas. Nesse contexto, destaca-se que compreender a relação entre morfologia e dieta pode auxiliar na elucidação dos processos que permeiam a coexistência entre espécies simpátricas e entre períodos ontogenéticos. Além disso, a relevante contribuição das medidas do aparato trófico (número de cúspide nos dentes, rastros branquiais e coeficiente intestinal) na segregação trófica parece ser uma forte evidência a favor das propostas de capacidades discriminatórias e preditivas dessas características.(AU)

Direct Effects of Temperature on Growth of Different Tropical Phytoplankton Species.

Temperature increase may influence competition among phytoplankton species, potentially intensifying cyanobacteria blooms that can be favored by direct and indirect effects of temperature. In this study, we aimed to clarify how cyanobacteria can be favored by the direct effects of increased temperature compared to diatoms and chlorophytes. Strains of the most representative species of a eutrophic coastal lagoon (Microcystis aeruginosa, Planktothrix agardhii, Desmodesmus communis, and Cyclotella meneghiniana) were used to test the hypothesis that cyanobacteria would be favored by the direct effect of temperature increase. First, we evaluated the effect of temperature increase on growth in monocultures (batch and chemostats) at 25 and 30 °C and after in mixed cultures (chemostats). In batch monocultures, the cyanobacteria showed higher growth rates in 30 °C than in 25 °C. However, in continuous culture experiments (chemostats), growth rates of M. aeruginosa and P. agardhii were not affected by temperature, but the strains showed higher biovolume in steady-state with the temperature increase. In continuous mixed cultures, M. aeruginosa was always dominant and C. meneghiniana was excluded, regardless of temperature tested. D. communis was able to coexist with lower biomass. This study shows that rising temperatures can be detrimental to diatoms, even for a tropical strain. Although some studies indicate that the dominance of cyanobacteria in warmer climates may be due to the indirect effect of warming that will promote physical conditions in the environment more favorable to cyanobacteria, the outcomes of mixed cultures demonstrate that the direct effect of temperature can also favor the dominance of cyanobacteria.

A novel approach for real-time monitoring of leaf wounding responses demonstrates unprecedently fast and high emissions of volatiles from cut leaves.

Wounding is a key plant stress that results in a rapid, within seconds to a few minutes, release of ubiquitous stress volatiles and stored volatiles in species with storage structures. Understanding the timing and extent of wound-dependent volatile elicitation is needed to gain an insight into different emission controls, but real-time monitoring of plant emissions through wounding treatments has been hampered by the need to stop the measurements to perform the wounding, slow stabilization of gas flows upon chamber closure and smearing out the signal by large chambers and long sampling lines. We developed a novel leaf cutter that allows to rapidly perform highly precise leaf cuts within the leaf chamber. The cutter was fitted to the standard Walz GFS-3000 portable gas-exchange system leaf chamber and chamber exhaust air for analysis with a proton transfer reaction time-of-flight mass-spectrometer (PTR-TOF-MS) was taken right at the leaf chamber outlet. Wounding experiments in four species of contrasting leaf structure demonstrated significant species differences in timing, extent and blend of emitted volatiles, and showed unprecedently high emission rates of several stress volatiles and stored monoterpenes. In light of the rapid rise of release of de novo synthesized and stored volatiles, the results of this study suggest that past studies have underestimated the rate of elicitation and maximum emission rates of wound-dependent volatiles.

Metabolome variability for two Mediterranean sponge species of the genus Haliclona: specificity, time, and space.

INTRODUCTION: The study of natural variation of metabolites brings valuable information on the physiological state of the organisms as well as their phenotypic traits. In marine organisms, metabolome variability has mostly been addressed through targeted studies on metabolites of ecological or pharmaceutical interest. However, comparative metabolomics has demonstrated its potential to address the overall and complex metabolic variability of organisms. OBJECTIVES: In this study, the intraspecific (temporal and spatial) variability of two Mediterranean Haliclona sponges (H. fulva and H. mucosa) was investigated through an untargeted and then targeted metabolomics approach and further compared to their interspecific variability. METHODS: Samples of both species were collected monthly during 1 year in the coralligenous habitat of the Northwestern Mediterranean sae at Marseille and Nice. Their metabolomic profiles were obtained by UHPLC-QqToF analyses. RESULTS: Marked variations were noticed in April and May for both species including a decrease in Shannon's diversity and concentration in specialized metabolites together with an increase in fatty acids and lyso-PAF like molecules. Spatial variations across different sampling sites could also be observed for both species, however in a lesser extent. CONCLUSIONS: Synchronous metabolic changes possibly triggered by physiological factors like reproduction and/or environmental factors like an increase in the water temperature were highlighted for both Mediterranean Haliclona species inhabiting close habitats but displaying different biosynthetic pathways. Despite significative intraspecific variations, metabolomic variability remains minor when compared to interspecific variations for these congenerous species, therefore suggesting the predominance of genetic information of the holobiont in the observed metabolome.

Functional traits of the understory plant community of a pyrogenic longleaf pine forest across environmental gradients.

Understanding and predicting the response of plant communities to environmental changes and disturbances such as fire requires an understanding of the functional traits present in the system, including within and across species variability, and their dynamics over time. These data are difficult to obtain as few studies provide comprehensive information for more than a few traits or species, rarely cover more than a single growing season, and usually present only summary statistics of trait values. As part of a larger study seeking to understand the dynamics of plant communities in response to different prescribed fire regimes, we measured the functional traits of the understory plant communities located in over 140 permanent plots spanning strong gradients in soil moisture in a pyrogenic longleaf pine forest in North Carolina, USA, over a four-year period from 2011 and 2014. We present over 120,000 individual trait measurements from over 130 plant species representing 91 genera from 47 families. We include data on the following 18 traits: specific leaf area, leaf dry matter content, leaf area, leaf length, leaf width, leaf perimeter, plant height, leaf nitrogen, leaf carbon, leaf carbon to nitrogen ratio, water use efficiency, time to ignition, maximum flame height, maximum burn temperature, mass-specific burn time, mass-specific smolder time, branching architecture, and the ratio of leaf matter consumed by fire. We also include information on locations, soil moisture, relative elevation, soil bulk density, and fire histories for each site.

Five species, many genotypes, broad phenotypic diversity: When agronomy meets functional ecology.

PREMISE OF THE STUDY: Current ecological theory can provide insight into the causes and impacts of plant domestication. However, just how domestication has impacted intraspecific genetic variability (ITV) is unknown. We used 50 ecotypes and 35 cultivars from five grassland species to explore how selection drives functional trait coordination and genetic differentiation. METHODS: We quantified the extent of genetic diversity among different sets of functional traits and determined how much genetic diversity has been generated within populations of natural ecotypes and selected cultivars. KEY RESULTS: In general, the cultivars were larger (e.g., greater height, faster growth rates) and had larger and thinner leaves (greater SLA). We found large (average 63%) and trait-dependent (ranging from 14% for LNC to 95.8% for growth rate) genetic variability. The relative extent of genetic variability was greater for whole-plant than for organ-level traits. This pattern was consistent within ecotypes and within cultivars. However, ecotypes presented greater ITV variability. CONCLUSIONS: The results indicated that genetic diversity is large in domesticated species with contrasting levels of heritability among functional traits and that selection for high yield has led to indirect selection of some associated leaf traits. These findings open the way to define which target traits should be the focus in selection programs, especially in the context of community-level selection.

Dynamics of δ(15)N isotopic signatures of different intertidal macroalgal species: Assessment of bioindicators of N sources in coastal areas.

δ(15)N of annual (Ulva sp., Porphyra sp.) and perennial intertidal seaweed species (Chondrus crispus, Fucus sp.) collected on 17 sampling points along the French coast of the English Channel in 2012 and 2013 were assessed on their suitability as bioindicators of N pollution in coastal areas. A sine function applied for δ(15)N time series data showed for all the species the same seasonal trend with lowest δ(15)N values in April and highest in summer but with no significant interspecific differences of amplitude (α) and phase angle (ϕ). This model provides a useful tool for monitoring the inter-annual changes of N pollution. An interspecific variability of δ(15)N values was observed, probably due to their tolerance to emersion. An in vitro study for comparing the kinetic acquisition of the isotopic signal and N uptake mechanisms of each species underlined the influence of algal physiology on the δ(15)N interspecific variability.

Individual and mixture effects of selected pharmaceuticals on larval development of the estuarine shrimp Palaemon longirostris.

Few ecotoxicological studies incorporate within the experimental design environmental variability and mixture effects when assessing the impact of pollutants on organisms. We have studied the combined effects of selected pharmaceutical compounds and environmental variability in terms of salinity and temperature on survival, development and body mass of larvae of the estuarine shrimp Palaemon longirostris. Drug residues found in coastal waters occur as mixture, and the evaluation of combined effects of simultaneously occurring compounds is indispensable for their environmental risk assessment. All larval stages of P. longirostris were exposed to the nonsteroidal anti-inflammatory drug (NSAID) diclofenac sodium (DS: 40 and 750 µg L(-1)), the lipid regulator clofibric acid (CA: 17 and 361 µg L(-1)) and the fungicide clotrimazole (CLZ: 0.14 and 4 µg L(-1)). We observed no effect on larval survival of P. longirostris with the tested pharmaceuticals. However, and in contrast to previous studies on larvae of the related marine species Palaemon serratus, CA affected development through an increase in intermoult duration and reduced growth without affecting larval body mass. These developmental effects in P. longirostris larvae were similar to those observed in the mixture of DS and CA confirming the toxic effects of CA. In the case of CLZ, its effects were similar to those observed previously in P. serratus: high doses affected development altering intermoult duration, tended to reduce the number of larval instars and decreased significantly the growth rate. This study suggests that an inter-specific life histories approach should be taken into account to assess the effect of emergent compounds in coastal waters.

Assessment of the Effects of Light Availability on Growth and Competition Between Strains of Planktothrix agardhii and Microcystis aeruginosa.

In this study, we tested the hypothesis that Planktothrix agardhii strains isolated from a tropical water body were better competitors for light than Microcystis aeruginosa strains. These cyanobacteria are common in eutrophic systems, where light is one of the main drivers of phytoplankton, and Planktothrix is considered more shade-adapted and Microcystis more high-light tolerant. First, the effect of light intensities on growth was studied in batch cultures. Next, the minimum requirement of light (I*) and the effect of light limitation on the outcome of competition was investigated in chemostats. All strains showed similar growth at 10 µmol photons m(-2) s(-1), demonstrating the ability of the two species to grow in low light. The optimum light intensity was lower for P. agardhii, but at the highest light intensity, Microcystis strains reached higher biovolume, confirming that P. agardhii has higher sensitivity to high light. Nonetheless, P. agardhii grew in light intensities considered high (500 µmol photons m(-2) s(-1)) for this species. M. aeruginosa showed a higher carrying capacity in light-limited condition, but I* was similar between all the strains. Under light competition, Microcystis strains displaced P. agardhii and dominated. In two cases, there was competitive exclusion and in the other two P. agardhii managed to remain in the system with a low biovolume (≈15%). Our findings not only show that strains of P. agardhii can grow under higher light intensities than generally assumed but also that strains of M. aeruginosa are better competitors for light than supposed. These results help to understand the co-occurrence of these species in tropical environments and the dominance of M. aeruginosa even in low-light conditions.

Long-term responsiveness to free air CO2 enrichment of functional types, species and genotypes of plants from fertile permanent grassland.

To test inter- and intraspecific variability in the responsiveness to elevated CO2, 9-14 different genotypes of each of 12 perennial species from fertile permanent grassland were grown in Lolium perenne swards under ambient (35 Pa) and elevated (60 Pa) atmospheric partial pressure of CO2 (pCO2) for 3 years in a free air carbon dioxide enrichment (FACE) experiment. The plant species were grouped according to their functional types: grasses (L. perenne, L. multiflorum, Arrhenatherum elatius, Dactylis glomerata, Festuca pratensis, Holcus lanatus, Trisetum flavescens), non-legume dicots (Rumex obtusifolius, R. acetosa, Ranunculus friesianus), and legumes (Trifolium repens, T. pratense). Yield (above a cutting height of 4.5 cm) was measured three times per year. The results were as follow. (1) There were highly significant differences in the responsiveness to elevated pCO2 between the three functional types; legumes showed the strongest and grasses the weakest yield increase at elevated pCO2. (2) There were differences in the temporal development of responsiveness to elevated pCO2 among the functional types. The responsiveness of the legumes declined from the first to the second year, while the responsiveness of the non-legume dicots increased over the 3 years. During the growing season, the grasses and the non-legume dicots showed the strongest response to elevated pCO2 during reproductive growth in the spring. (3) There were no significant genotypic differences in responsiveness to elevated pCO2. Our results suggest that, due to interspecific differences in the responsiveness to elevated pCO2, the species proportion within fertile temperate grassland may change if the increase in pCO2 continues. Due to the temporal differences in the responsiveness to elevated pCO2 among species, complex effects of elevated pCO2 on competitive interactions in mixed swards must be expected. The existence of genotypic variability in the responsiveness to elevated pCO2, on which selection could act, was not found under our experimental conditions.