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Research Highlight: Bourbour et al., 2024. Feeding en route: Prey availability and traits influence prey selection by an avian predator on migration. Journal of Animal Ecology. Diet selection plays a key role in the eco-evolutionary dynamics of animals, exhibiting substantial variability across species, environments and seasons. The complex interplay between movement capability, hunting strategies, habitat use, prey traits and availability shapes the foraging patterns of avian predators. However, detailed information on how these birds exploit their extensive territories remains limited. In this study, Bourbour et al. utilised a novel integration of eDNA metabarcoding and citizen science to explore predator-prey interactions between migrating sharp-shinned hawks (Accipiter striatus) and an ephemeral avian prey community along North America's Pacific flyway. The research identified 1396 detections from the diet (65 species) of 588 migrating sharp-shinned hawks. Hawks' diet composition correlated with prey abundance indices sourced from the eBird database throughout the migration season, highlighting the significant impact of prey availability-shaped by migration tendency, flocking behaviour, and habitat-on raptor-songbird interactions. Notably, the study also found significant differences in prey size between male and female hawks, indicating that sexual dimorphism has led to diverse foraging strategies during migration. These findings underscore the potential of combining eDNA metabarcoding with citizen science to deepen our understanding of the foraging ecology of highly mobile and wide-ranging birds, as well as to monitor complex and vast ecosystems.
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Asteraceae is the world's richest plant family and is found on all continents, in environments ranging from the coast to the highest mountains. The family shows all growth forms and, as in other angiosperm families, species richness is concentrated in tropical regions. South America has the highest diversity of Asteraceae in the world, yet taxonomic and distributional knowledge gaps remain. This study compiles an updated catalog of Asteraceae native to South America, based on national and regional checklists and ongoing large-scale flora projects. The resulting checklist includes a total of 6,940 species and 564 genera native to South America to date, which represent about a quarter of the family's global diversity. Countries already considered to be megadiverse show the greatest diversity, such as Brazil with 2,095 species, followed by Peru (1,588), Argentina (1,377), and Colombia (1,244), with this diversity mainly focused on the Brazilian Highlands and the Andes. Species endemism also peaks in Brazil, but Sørensen distances reveal the Chilean flora to be eminently different from the rest of the continent. Tribes better represented in the continent are Eupatorieae, Senecioneae and Astereae, also with a remarkably presence of entirely South American subfamilies representing earliest diverging lineages of the Asteraceae, such as Barnadesioideae, Wunderlichioideae, Famatinanthoideae, and Stifftioideae. It is estimated that the discovery and description curves have not yet stabilized, and the number of species is likely to increase by 5 to 10% in the coming years, posing major challenges to continental-scale conservation.
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Zea mays L is a crucial crop for Brazil, ranking second in terms of production and sixth in terms of exports. In Brazil, the second season, or off-season, accounts for 80 % of the overall maize output, which primarily occurs after the soybean main season. A maize yield forecast model for the off-season was developed and implemented throughout Brazilian territory due to its importance to the country's economy and food security. The model was built using multiple linear regressions that connected outputs simulated from a land surface model used in large-scale analysis for agriculture (JULES-crop), to agrometeorological indicators. The application of the developed model occurred every 10 days from the sowing until the maturation. A comparison of the forecasting model was verified with the official off-season maize yields for the years 2003-2016. Agrometeorological indicators during the reproductive phase accounted for 60 % of the interannual variability in maize production. When outputs simulated by JULES-crop were included, the forecasting model achieved Nash-Sutcliffe modeling efficiency (EF) of 0.77 in the maturation and EF = 0.72 in the filling-grain stage, suggesting that this approach can generate useful predictions for final maize yield beginning on the 80th day of the cycle. Outputs of JULES crop enhanced modeling performance during the vegetative stage, reducing the standard deviation error in prediction from 0.59 to 0.49 Mg ha-1.
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Companies dedicated to the large-scale propagation of plant species are known as biofactories or agricultural biotechnology companies. Globally, there are a large number of biofactories (large-scale production) or plant tissue culture laboratories (small-scale production) in charge of supplying commercial propagules of plants of economic interest. Each biofactory implements technological developments such as temporary immersion (TIS) systems that allow them to reduce costs. This chapter analyzes some of the biofactories established globally, the main plant species propagated, and whether or not they implement the use of TIS.
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Agricultura , Inmersión , Biotecnología , Laboratorios , ReproducciónRESUMEN
Temporary immersion systems (TIS) have been used for orchid micropropagation. The main advantage of TIS use for micropropagation is that the explant is periodically immersed in nutrient media, and then, the nutrient solution is drained, which allows the explant tissue to stay in air. The current review resumes the application of TIS in orchid propagation. Fifty-three papers are discussed considering: explant, culture media, TIS bioreactor type, frequency and immersion time, and the TIS effects in acclimatization phase.
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Aclimatación , Inmersión , Reactores Biológicos , Medios de Cultivo , NutrientesRESUMEN
Governments around the globe are paving the way for healthcare services that can have a profound impact on the overall well-being and development of their nations. However, government programs to implement health information technologies on a large-scale are challenging, especially in developing countries. In this article, the process and outcomes of the large-scale implementation of a hospital information system for the management of Brazilian university hospitals are analyzed. Based on a qualitative approach, this research involved 21 hospitals and comprised a documentary search, interviews with 24 hospital managers and two system user focus groups, and a questionnaire of 736 respondents. Generally, we observed that aspects relating to the wider context of system implementation (macro level), the managerial structure, cultural nuances, and political dynamics within each hospital (meso level), as well as the technology, work activities, and individuals themselves (micro level) acted as facilitators and/or obstacles to the implementation process. The dynamics and complex interactions established between these aspects had repercussions on the process, including the extended time necessary to implement the national program and the somewhat mixed outcomes obtained by hospitals in the national network. Mostly positive, these outcomes were linked to the eight emerging dimensions of practices and work processes; planning, control, and decision making; transparency and accountability; optimization in the use of resources; productivity of professionals; patient information security; safety and quality of care; and improvement in teaching and research. We argued here that to maximize the potential of information technology in healthcare on a large-scale, an integrative and cooperative vision is required, along with a high capacity for change management, considering the different regional, local, and institutional contexts.
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Sistemas de Información en Salud , Sistemas de Información en Hospital , Humanos , Hospitales Universitarios , Brasil , Grupos FocalesRESUMEN
Over large regions exposed to natural disasters, cascading effects resulting from complex or concatenated natural processes may represent a large portion of total risk. Populated high-mountain environments are a major concern, and methods for large-scale quantitative risk analyses are urgently required to improve risk mitigation. This article presents a comprehensive quantitative rockfall risk assessment over a large archetypal valley of the Andean mountains, in Central Chile, which integrates a wide spectrum of elements at risk. Risk is expressed as an expected damage both in monetary terms and casualties, at different scales relevant for decision making. Notably, total rockfall risk is divided into its main drivers, which allows quantifying seismically induced rockfall risk. For this purpose, the local seismic hazard is quantified and the yield acceleration, that is, acceleration required to initiate rockfall, is determined at the regional scale. The probability of failure is thereafter derived in terms of annual frequency of rockfall initiation and integrated in the quantitative risk assessment (QRA) process. Our results show the significant role of seismic activity as the triggering mechanism of rockfalls, and highlight elements at risk that have a major contribution to the total risk. Eventually a sensitivity analysis is conducted to (i) assess the robustness of obtained risk estimates to the data and modeling choices and (ii) identify the most influential assumptions. Our approach evidences the feasibility of large-scale QRAs in sensitive environments and opens perspectives for refining QRAs in similar territories significantly affected by cascading effects and multihazards.
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Anthropogenic Marine Litter (AML) accumulating on beaches causes damage to coastal ecosystems and high costs to local communities. Volunteers sampled AML on 130 beaches along the central and southern East Pacific coasts, with AML densities ranging from 0.46 to 2.26 items m-2 in the different countries. AML composition was dominated by plastics and cigarette butts, the latter especially in Mexico and Chile. The accumulation of AML in the upper zones of the beaches and substantial proportions of cigarette butts, glass and metal pointed mainly to local sources. Statistical modelling of litter sources on continental beaches revealed that tourism, access and related infrastructure (e.g. parking lots) best explained AML densities, while plastic densities were also influenced by the distance from river mouths and national Gross Domestic Product. Large-scale monitoring can be a useful tool to evaluate the effectiveness of public policies that should primarily focus on land sources.
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Leucemia Mieloide Aguda , Residuos , Humanos , Residuos/análisis , Monitoreo del Ambiente , Ecosistema , Playas , PlásticosRESUMEN
Microsatellites, also known as SSRs or STRs, are polymorphic DNA regions with tandem repetitions of a nucleotide motif of size 1-6 base pairs with a broad range of applications in many fields, such as comparative genomics, molecular biology, and forensics. However, the majority of researchers do not have computational training and struggle while running command-line tools or very limited web tools for their SSR research, spending a considerable amount of time learning how to execute the software and conducting the post-processing data tabulation in other tools or manually-time that could be used directly in data analysis. We present EasySSR, a user-friendly web tool with command-line full functionality, designed for practical use in batch identifying and comparing SSRs in sequences, draft, or complete genomes, not requiring previous bioinformatic skills to run. EasySSR requires only a FASTA and an optional GENBANK file of one or more genomes to identify and compare STRs. The tool can automatically analyze and compare SSRs in whole genomes, convert GenBank to PTT files, identify perfect and imperfect SSRs and coding and non-coding regions, compare their frequencies, abundancy, motifs, flanking sequences, and iterations, producing many outputs ready for download such as PTT files, interactive charts, and Excel tables, giving the user the data ready for further analysis in minutes. EasySSR was implemented as a web application, which can be executed from any browser and is available for free at https://computationalbiology.ufpa.br/easyssr/. Tutorials, usage notes, and download links to the source code can be found at https://github.com/engbiopct/EasySSR.
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The high complexity of the oral microbiota of healthy dogs and the close exposure of humans to companion animals represent a risk of the transmission of potential zoonotic microorganisms to humans, especially through dog bites, including multidrug-resistant ones. Nonetheless, a limited number of comprehensive studies have focused on the diversity of the microorganisms that inhabit the oral cavities of healthy dogs, particularly based on modern molecular techniques. We investigated bacterial and fungal organisms in the oral cavities of 100 healthy dogs based on a combination of conventional and selective microbiological culture, mass spectrometry (MALDI-TOF MS), and next-generation sequencing. In addition, in vitro antimicrobial susceptibility patterns of isolates and mecA resistance gene were assessed. A total of 213 bacteria and 20 fungi were isolated. Staphylococcus pseudintermedius (40/100 = 40%), α-hemolytic Streptococcus (37/100 = 37%), and Pasteurella stomatis (22/100 = 22%) were the most prevalent bacteria diagnosed by microbiological culture and MALDI-TOF MS, whereas Aspergillus (10/100 = 10%) was the most common fungi identified. Based on next-generation sequencing of selected 20 sampled dogs, Porphyromonas (32.5%), Moraxella (16.3%), Fusobacterium (12.8%), Conchiformibius (9.5%), Bergeyella (5%), Campylobacter (3.8%), and Capnocytophaga (3.4%) genera were prevalent. A high multidrug resistance rate was observed in Staphylococcus pseudintermedius isolates, particularly to azithromycin (19/19 = 100%), penicillin (15/19 = 78.9%), and sulfamethoxazole/trimethoprim (15/19 = 78.9%). In addition, the mecA resistance gene was detected in 6.1% (3/49) of coagulase-positive staphylococci. Here, we highlight the microbial complexity of the oral mucosa of healthy dogs, including potential zoonotic microorganisms and multidrug-resistant bacteria, contributing with the investigation of the microbiota and antimicrobial resistance patterns of the microorganisms that inhabit the oral cavity of healthy dogs.
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Introduction: There is a global effort to address the school dropout phenomenon. The urgency to act on it comes from the harmful evidence that school dropout has on societal and individual levels. Early Warning Systems (EWS) for school dropout at-risk student identification have been developed to anticipate and help schools have a better chance of acting on it. However, several studies point to a doubt that Correct EWS may come too late because they use only publicly available and general student and school information. We hypothesize that having a tool to assess more subjective and inter-relational factors would help anticipate where and when to act to prevent school dropout. This study aimed to develop a multidimensional measure for assessing relational factors for predicting school dropout (SD) risk in the Brazilian context. Methods: We performed several procedures, including (a) the specialized literature review, (b) the item development of the Relational Factors for the Risk of School Dropout Scale (IAFREE in Portuguese), (c) the content validity analysis, (d) a pilot study, and (e) the administration of the IAFREE to a large Brazilian sample of high school and middle school students (N = 15,924). Results: After the theoretical steps, we found content validity for five relational dimensions for SD (Student-School, Student-School Professionals, Student-Family, Student-Community, and Student-Student) that include 12 facets of risk factors. At the empirical stage, confirmatory analysis corroborated the proposed theoretical model with 12 first-order risk factors and 5 s-order dimensions (36 items). Further, through the Item Response Theory analysis, we assessed the individual item parameters of the items, providing a brief measure without losing psychometric quality (IAFREE-12). Discussion: We discuss how this model may fill gaps in Correct EWS models and how to advance it. The IAFREE is a good measure for scholars investigating the risk of SD. These results are important for implementing an early warning system for SD that looks into the complexity of the school dropout phenomenon.
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The presence and levels of transgenic maize in Mexico and the effect this could have on local landraces or closely related species such as teosinte has been the subject of several previous reports, some showing contrasting results. Cultural, social and political factors all affect maize cultivation in Mexico and although since 1998 there has been a moratorium on the commercial cultivation of transgenic maize, Mexico imports maize, mainly from the USA where transgenic cultivars are widely grown. Additionally extensive migration between rural areas in Mexico and the USA and customs of seed exchange between farmers may also play an unintentional role in the establishment of transgenic seed. A comprehensive study of all Mexican maize landraces throughout the country is not feasible, however this report presents data based on analysis of 3204 maize accessions obtained from the central region of Mexico (where permits have never been authorized for cultivation of transgenic maize) and the northern region (where for a short period authorization for experimental plots was granted). The results of the study confirm that transgenes are present in all the geographical areas sampled and were more common in germplasm obtained in the northern region. However, there was no evidence that regions where field trials had been authorized showed higher levels of transgene presence or that the morphology of seed lots harboring transgenic material was significantly modified in favor of expected transgenic phenotypes.
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Zea mays , Animales , Plantas Modificadas Genéticamente/genética , Zea mays/genética , México , Transgenes , Animales Modificados GenéticamenteRESUMEN
Tropical ecosystems are central to the global focus on halting and reversing habitat destruction as a means of mitigating carbon emissions. Brazil has been highlighted as a vital part of global climate agreements because, whilst ongoing land-use change causes it to be the world's fifth biggest greenhouse gas emitting country, it also has one of the greatest potentials to implement ecosystem restoration. Global carbon markets provide the opportunity of a financially viable way to implement restoration projects at scale. However, except for rainforests, the restoration potential of many major tropical biomes is not widely recognised, with the result that carbon sequestration potential may be squandered. We synthesize data on land availability, land degradation status, restoration costs, area of native vegetation remaining, carbon storage potential and carbon market prices for 5475 municipalities across Brazil's major biomes, including the savannas and tropical dry forests. Using a modelling analysis, we determine how fast restoration could be implemented across these biomes within existing carbon markets. We argue that even with a sole focus on carbon, we must restore other tropical biomes, as well as rainforests, to effectively increase benefits. The inclusion of dry forests and savannas doubles the area which could be restored in a financially viable manner, increasing the potential CO2e sequestered >40 % above that offered by rainforests alone. Importantly, we show that in the short-term avoiding emissions through conservation will be necessary for Brazil to achieve it's 2030 climate goal, because it can sequester 1.5 to 4.3 Pg of CO2e by 2030, relative to 0.127 Pg CO2e from restoration. However, in the longer term, restoration across all biomes in Brazil could draw down between 3.9 and 9.8 Pg of CO2e from the atmosphere by 2050 and 2080.
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Secuestro de Carbono , Ecosistema , Brasil , Análisis Costo-Beneficio , Bosques , Carbono , Conservación de los Recursos NaturalesRESUMEN
The history and recent developments of conservation biological control (CBC) in the context of industrialized and small-scale agriculture are discussed from theoretical framework available in the Neotropical region. A historical perspective is presented in terms of the transition of the way pests have been controlled since ancestral times, while some of these techniques persist in some areas cultivated on a small-scale agriculture. The context of industrialized agriculture sets the stage for the transition from chemical pesticides promoted in the green revolution to the more modern concept of IPM and finds in conservation biological an important strategy in relation to more sustainable pest management options meeting new consumer demands for cleaner products and services. However, it also noted that conservation, considered within a more integrative approach, establishes its foundations on an overall increase in floral biodiversity, that is, transversal to both small-scale and industrialized areas. In the latter case, we present examples where industrialized agriculture is implementing valuable efforts in the direction of conservation and new technologies are envisioned within more sustainable plant production systems and organizational commitment having that conservation biological control has become instrumental to environmental management plans. In addition, a metanalysis on the principal organisms associated with conservation efforts is presented. Here, we found that hymenopteran parasitoids resulted in the most studied group, followed by predators, where arachnids constitute a well-represented group, while predatory vertebrates are neglected in terms of reports on CBC. Our final remarks describe new avenues of research needed and highlight the need of cooperation networks to propose research, public outreach, and adoption as strategic to educate costumers and participants on the importance of conservation as main tool in sustainable pest management.
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Control Biológico de Vectores , Plaguicidas , Animales , Control Biológico de Vectores/métodos , Agricultura/métodos , Control de Plagas , Biodiversidad , Conducta PredatoriaRESUMEN
Glial cells are non-neuronal elements of the nervous system (NS) and play a central role in its development, maturation, and homeostasis. Glial cell interest has increased, leading to the discovery of novel study fields. The CRISPR/Cas system has been widely employed for NS understanding. Its use to study glial cells gives crucial information about their mechanisms and role in the central nervous system (CNS) and neurodegenerative disorders. Furthermore, the increasingly accelerated discovery of genes associated with the multiple implications of glial cells could be studied and complemented with the novel screening methods of high-content and single-cell screens at the genome-scale as Perturb-Seq, CRISP-seq, and CROPseq. Besides, the emerging methods, GESTALT, and LINNAEUS, employed to generate large-scale cell lineage maps have yielded invaluable information about processes involved in neurogenesis. These advances offer new therapeutic approaches to finding critical unanswered questions about glial cells and their fundamental role in the nervous system. Furthermore, they help to better understanding the significance of glial cells and their role in developmental biology.
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Object location is a crucial computer vision method often used as a previous stage to object classification. Object-location algorithms require high computational and memory resources, which poses a difficult challenge for portable and low-power devices, even when the algorithm is implemented using dedicated digital hardware. Moving part of the computation to the imager may reduce the memory requirements of the digital post-processor and exploit the parallelism available in the algorithm. This paper presents the architecture of a Smart Imaging Sensor (SIS) that performs object location using pixel-level parallelism. The SIS is based on a custom smart pixel, capable of computing frame differences in the analog domain, and a digital coprocessor that performs morphological operations and connected components to determine the bounding boxes of the detected objects. The smart-pixel array implements on-pixel temporal difference computation using analog memories to detect motion between consecutive frames. Our SIS can operate in two modes: (1) as a conventional image sensor and (2) as a smart sensor which delivers a binary image that highlights the pixels in which movement is detected between consecutive frames and the object bounding boxes. In this paper, we present the design of the smart pixel and evaluate its performance using post-parasitic extraction on a 0.35 µm mixed-signal CMOS process. With a pixel-pitch of 32 µm × 32 µm, we achieved a fill factor of 28%. To evaluate the scalability of the design, we ported the layout to a 0.18 µm process, achieving a fill factor of 74%. On an array of 320×240 smart pixels, the circuit operates at a maximum frame rate of 3846 frames per second. The digital coprocessor was implemented and validated on a Xilinx Artix-7 XC7A35T field-programmable gate array that runs at 125 MHz, locates objects in a video frame in 0.614 µs, and has a power consumption of 58 mW.
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Algoritmos , Computadores , Movimiento (Física)RESUMEN
BACKGROUND: During large scale combat operations, rising numbers of casualties will likely outstrip in-theater US military medical hospitalization assets. This highlights the importance of identifying those casualties who can return to the fight in order to minimize further medical resource depletion. We describe specific characteristics of casualties returned to duty without requiring evacuation from theater during recent major combat operations. MATERIALS AND METHODS: We conducted a secondary analysis of previously published data from the Department of Defense Trauma Registry during 01 January 2007 through 17 March 2020. We included all adult US military casualties. We categorized casualties according to documented disposition, namely, return to duty within 72 hours without evacuation from theater, return to duty greater than 72 hours without evacuation from theater, and all other casualties. RESULTS: Of 10,182 adult US military casualties, 3,856 (37.9%) returned to duty within 72 hours without evacuation from theater and 220 (2.2%) returned to duty in greater than 72 hours without evacuation from theater. The cohort that rapidly returned to duty had a lower median injury severity score (2) than casualties returning to duty in greater than 72 hours (4) and those evacuated from theater (11). Notably higher proportions of casualties evacuated from theater sustained injuries to the face, thorax, abdomen, and extremities. Modes of transportation were similar across all three groups, though casualties undergoing evacuation from theater were more likely to undergo air transportation during the spectrum of their medical care. CONCLUSIONS: Most combat casualties returning to duty without evacuation from theater did so within 72 hours of hospitalization. Casualties not requiring evacuation from theater were less likely to sustain injuries to the face, thorax, abdomen, and extremities.
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Personal Militar , Triaje , Adulto , Humanos , Puntaje de Gravedad del Traumatismo , Guerra de Irak 2003-2011 , Estudios RetrospectivosRESUMEN
Nowadays, conventional agriculture farms lack high-level automated management due to the limited number of installed sensor nodes and measuring devices. Recent progress of the Internet of Things (IoT) technologies will play an essential role in future smart farming by enabling automated operations with minimum human intervention. The main objective of this work is to design and implement a flexible IoT-based platform for remote monitoring of agriculture farms of different scales, enabling continuous data collection from various IoT devices (sensors, actuators, meteorological masts, and drones). Such data will be available for end-users to improve decision-making and for training and validating advanced prediction algorithms. Unlike related works that concentrate on specific applications or evaluate technical aspects of specific layers of the IoT stack, this work considers a versatile approach and technical aspects at four layers: farm perception layer, sensors and actuators layer, communication layer, and application layer. The proposed solutions have been designed, implemented, and assessed for remote monitoring of plants, soil, and environmental conditions based on LoRaWAN technology. Results collected through both simulation and experimental validation show that the platform can be used to obtain valuable analytics of real-time monitoring that enable decisions and actions such as, for example, controlling the irrigation system or generating alarms. The contribution of this article relies on proposing a flexible hardware and software platform oriented on monitoring agriculture farms of different scales, based on LoRaWAN technology. Even though previous work can be found using similar technologies, they focus on specific applications or evaluate technical aspects of specific layers of the IoT stack.
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Agricultura , Comunicación , Agricultura/métodos , Chile , Granjas , Humanos , Programas InformáticosRESUMEN
Microalgae are regarded as a promising source of biodiesel. In contrast with conventional crops currently used to produce commercial biodiesel, microalgae can be cultivated on non-arable land, besides having a higher growth rate and productivity. However, microalgal biodiesel is not yet regarded as economically competitive, compared to fossil fuels and crop-based biodiesel; therefore, it is not commercially produced. This review provides an overall perspective on technologies with the potential to increase efficiency and reduce the general costs of biodiesel production from microalgae. Opportunities and challenges for large-scale production are discussed. We present the current scenario of Brazilian research in the field and show a successful case in the research and development of microalgal biodiesel in open ponds by Petrobras. This publicly held Brazilian corporation has been investing in research in this sector for over a decade.
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The medial nucleus of the trapezoid body (MNTB) is an integral component of the auditory brainstem circuitry involved in sound localization. The giant presynaptic nerve terminal with multiple active zones, the calyx of Held (CH), is a hallmark of this nucleus, which mediates fast and synchronized glutamatergic synaptic transmission. To delineate how these synaptic structures adapt to reduced auditory afferents due to aging, we acquired and reconstructed circuitry-level volumes of mouse MNTB at different ages (3 weeks, 6, 18, and 24 months) using serial block-face electron microscopy. We used C57BL/6J, the most widely inbred mouse strain used for transgenic lines, which displays a type of age-related hearing loss. We found that MNTB neurons reduce in density with age. Surprisingly we observed an average of approximately 10% of poly-innervated MNTB neurons along the mouse lifespan, with prevalence in the low frequency region. Moreover, a tonotopy-dependent heterogeneity in CH morphology was observed in young but not in older mice. In conclusion, our data support the notion that age-related hearing impairments can be in part a direct consequence of several structural alterations and circuit remodeling in the brainstem.