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1.
Front Microbiol ; 15: 1400700, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38993489

RESUMEN

Stenotrophomonas maltophilia (S. maltophilia) is an emerging opportunistic pathogen that exhibits resistant to a majority of commonly used antibiotics. Phages have the potential to serve as an alternative treatment for S. maltophilia infections. In this study, a lytic phage, A1432, infecting S. maltophilia YCR3A-1, was isolated and characterized from a karst cave. Transmission electron microscopy revealed that phage A1432 possesses an icosahedral head and a shorter tail. Phage A1432 demonstrated a narrow host range, with an optimal multiplicity of infection of 0.1. The one-step growth curve indicated a latent time of 10 min, a lysis period of 90 min, a burst size of 43.2 plaque-forming units per cell. In vitro bacteriolytic activity test showed that phage A1432 was capable to inhibit the growth of S. maltophilia YCR3A-1 in an MOI-dependent manner after 2 h of co-culture. BLASTn analysis showed that phage A1432 genome shares the highest similarity (81.46%) with Xanthomonas phage Xoo-sp2 in the NCBI database, while the query coverage was only 37%. The phage contains double-stranded DNA with a genome length of 61,660 bp and a GC content of 61.92%. It is predicted to have 79 open reading frames and one tRNA, with no virulence or antibiotic resistance genes. Phylogenetic analysis using terminase large subunit and DNA polymerase indicated that phage A1432 clustered with members of the Bradleyvirinae subfamily but diverged into a distinct branch. Further phylogenetic comparison analysis using Average Nucleotide Identity, proteomic phylogenetic analysis, genomic network analysis confirmed that phage A1432 belongs to a novel genus within the Bradleyvirinae subfamily, Mesyanzhinovviridae family. Additionally, phylogenetic analysis of the so far isolated S. maltophilia phages revealed significant genetic diversity among these phages. The results of this research will contribute valuable information for further studies on their morphological and genetic diversity, will aid in elucidating the evolutionary mechanisms that give rise to them.

2.
Zookeys ; 1205: 39-50, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38938266

RESUMEN

The genus Elegansovella Hirschmann, 1989 (Mesostigmata: Uropodina: Urodinychidae) is resurrected for species of the Uroobovellaelegans-group. This genus differs from the other taxa of Uroobovella Berlese, 1903 sensu lato based on the shape of the idiosoma and the caudal and dorsal setae. Three species from the Uroobovellaelegans-group are transferred to the genus Elegansovella, as E.pectintata (Hirschmann, 1973), comb. nov., E.pectinatasimilis (Hiramatsu, 1980), comb. nov. and E.serangensis (Hiramatsu, 1980), comb. nov. The other seven species from this species group are transferred to Monstrobovella gen. nov., as M.crustosa (Vitzthum, 1926), comb. nov., M.enodis (Hiramatsu, 1985), comb. nov., M.faceta (Hiramatsu & Hirschmann, 1978), comb. nov., M.facetaoides (Hiramatsu & Hirschmann, 1978), comb. nov., M.imadatei (Hiramatsu, 1980), comb. nov., M.incerta (Hiramatsu & Hirschmann, 1978), comb. nov. and M.incertaoides (Hiramatsu & Hirschmann, 1978), comb. nov. The new genus differs from Elegansovella by the shape of the idiosoma and the shape of marginal and dorsal setae. Six Monstrobovella species occur in the Oriental Realm and only one species is known from the Neotropical region. The present paper contains the description of a second Neotropical species of Monstrobovella (M.mancocapaci sp. nov.) which was found in Peru. The new species differs from its Neotropical congener in the dorsal and marginal setation.

3.
Zookeys ; 1203: 355-375, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38855792

RESUMEN

A new family of antipatharian corals, Ameripathidae (Cnidaria: Anthozoa: Antipatharia), is established for Ameripathespseudomyriophylla Opresko & Horowitz, gen. et sp. nov. The new family resembles Myriopathidae and Stylopathidae in terms of the morphology of the polyps and tentacles and the pinnulate branching of the corallum. Phylogenetic analysis using a genomic data set of 741 conserved element loci indicates that the new family is sister to a clade containing the Myriopathidae, Stylopathidae, Antipathidae, and Aphanipathidae.

4.
Sci Rep ; 14(1): 13819, 2024 06 15.
Artículo en Inglés | MEDLINE | ID: mdl-38879636

RESUMEN

Culture-dependent and metagenomic binning techniques were employed to gain an insight into the diversification of gut bacteria in Rhinopithecius bieti, a highly endangered primate endemic to China. Our analyses revealed that Bacillota_A and Bacteroidota were the dominant phyla. These two phyla species are rich in carbohydrate active enzymes, which could provide nutrients and energy for their own or hosts' survival under different circumstances. Among the culturable bacteria, one novel bacterium, designated as WQ 2009T, formed a distinct branch that had a low similarity to the known species in the family Sphingobacteriaceae, based on the phylogenetic analysis of its 16S rRNA gene sequence or phylogenomic analysis. The ANI, dDDH and AAI values between WQ 2009T and its most closely related strains S. kitahiroshimense 10CT, S. pakistanense NCCP-246T and S. faecium DSM 11690T were significantly lower than the accepted cut-off values for microbial species delineation. All results demonstrated that WQ 2009T represent a novel genus, for which names Rhinopithecimicrobium gen. nov. and Rhinopithecimicrobium faecis sp. nov. (Type strain WQ 2009T = CCTCC AA 2021153T = KCTC 82941T) are proposed.


Asunto(s)
Microbioma Gastrointestinal , Metagenómica , Filogenia , ARN Ribosómico 16S , Animales , Microbioma Gastrointestinal/genética , Metagenómica/métodos , ARN Ribosómico 16S/genética , Bacteroidetes/genética , Bacteroidetes/aislamiento & purificación , Bacteroidetes/clasificación
5.
Zookeys ; 1204: 241-259, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38882563

RESUMEN

The first phylogenetic inference of Calopterini and Eurrhacini focused on Calocladon and related taxa was carried out. A data matrix composed of 46 species and 51 morphological characters was assembled and analyzed using parsimony and model-based approaches. Eurrhacini were recovered monophyletic. Furthermore, phylogenetic analyses highly supported the Calocladon clade including also Atlanticolycus, Cladocalon, and Gorhamium gen. nov. as its sister clade. Our trees consistently recovered monophyly of the new genus with two new species: Gorhamiumbidentatum sp. nov. (Panama, Baru Volcano) and G.unidentatum sp. nov. from the Pacific slopes of Ecuador. A revised key to the genera of Eurrhacini is given and illustrations of distinguishing characters are provided. Phylogenetic relationships of Eurrhacini and character evolution are discussed.

6.
Emerg Infect Dis ; 30(8)2024 Jun 21.
Artículo en Inglés | MEDLINE | ID: mdl-38907366

RESUMEN

We report discovery of a new bacterial genus and species of the family Pasteurellaceae by using phylogenetic and metabolic analysis. The bacterium, Emayella augustorita, was isolated from blood cultures of a patient in France diagnosed with an adenocarcinoma of the intestines and who was treated with a biliary prosthesis placement.

7.
Sci Rep ; 14(1): 13705, 2024 06 14.
Artículo en Inglés | MEDLINE | ID: mdl-38871833

RESUMEN

Of the early Eocene amber deposits known across the world, Belgian amber has been mostly absent from the relevant literature. We reinvestigated amber held in the palaeobotanical collection of the Royal Belgian Institute of Natural Sciences, Brussels, which derived from three localities in Belgium that originated from two geographical areas (Leval-Trahegnies and Orp-le-Grand). Using Fourier transform infrared (FTIR) spectroscopy we show the close chemical relationship of Belgian amber to the early Eocene Oise amber from the Paris Basin, and highlight the potential effect of weathering on the amber chemistry. The amber derives from a very similar botanical source as the Oise amber (Combretaceae or Leguminosae-Caesalpinioideae), but from different coeval basins. The two Leval-Trahegnies localities provided amber that exhibit different stages of weathering (heavily fissured and crazed, darkened) and lacking any inclusions. The Orp-le-Grand locality provided the least weathered amber, with one amber piece containing two inclusions: a mite and a new genus and species of hemipteran (Cativolcus uebruum gen. et sp. nov.), and a second one that preserved the impression of insect wings pressed into the surface.


Asunto(s)
Ámbar , Fósiles , Bélgica , Ámbar/química , Animales , Francia , Espectroscopía Infrarroja por Transformada de Fourier , Ácaros , Hemípteros/anatomía & histología , Paleontología/métodos
8.
Insects ; 15(6)2024 Jun 11.
Artículo en Inglés | MEDLINE | ID: mdl-38921157

RESUMEN

The abundance of insects in Burmese amber illustrates a highly diverse insect community from the mid-Cretaceous period; yet, records of crickets (Grylloidea) are notably scarce. In this study, we describe two new genera with three new species, Palaeotrigonidium concavoculus gen. et sp. nov., Palaeotrigonidium defectivus sp. nov., and Tricalcaratus longilineus gen. et sp. nov., based on three specimens collected in north Myanmar. These new species can be placed within the Trigonidiidae (Orthoptera: Grylloidea) by their triangular head, compound eyes that protrude in dorsal view, and a body entirely covered with robust setae, particularly noticeable in the head and pronotum; however, subfamily assignments are not possible. Another known species, Birmaninemobius hirsutus, Xu et al., 2020, from Myanmar amber is redescribed based on a new specimen and a recheck of the holotype.

9.
Insects ; 15(5)2024 May 08.
Artículo en Inglés | MEDLINE | ID: mdl-38786894

RESUMEN

Despite being the most widespread blister beetle subfamily, Nemognathinae is unfairly understudied in China. In this study, a new genus and species, Sinostenoria yangi Pan, from northern China is described and illustrated. The antennae, elytra, hind wings, and claws of the new genus form a truly unique set of characteristics never observed in other genera of Nemognathini Laporte de Castelnau, 1840. Three species from China are newly recorded and illustrated: Megatrachelus sibiricus (Tauscher, 1812), Zonitomorpha dollei (Fairmaire 1889), and Stenodera djakonovi Aksentjev, 1978. The genus Oreomeloe Tan, 1981, is transferred from the tribe Meloini Gyllenhal, 1910, to Nemognathini based on an examination of the types. Aiming to test the morphology-based placement of the new genus, we conducted molecular phylogenetic analyses using two mitochondrial (COI, 16S) and three nuclear markers (28S, CAD, ITS2). The results confirm our tribal assignment of the new genus and support a clade that consists of Sinostenoriagen. n., Longizonitis Pan and Bologna, 2018, Stenoria cf. grandiceps, and Ctenopus cf. persicus.

10.
Zookeys ; 1202: 135-154, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38800562

RESUMEN

We report a new land snail species representing a new genus from the mountainous area of Zhejiang, China. The snail has a depressed shell with granules all over the surface. The soft part of the new taxon is characterized by the presence of a mantle lobe whose form is reviewed herein across a wide range of helicoid snails, the presence of a developed epiphallic papilla, and the absence of a penial sheath, a dart sac apparatus and a flagellum. As indicated by a molecular-based phylogeny (16S + ITS2), the new taxon is deeply nested in the eastern Asian camaenid genera and shows a close relationship with the camaenids distributed in Central China.

11.
Zookeys ; 1200: 199-213, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38756345

RESUMEN

Pooleagen. nov. is described for two noctuid species from southwestern United States: Pooleagrandimacula Barnes & McDunnough, comb. nov., previously in Oxycnemis Grote, and Pooleapsaphidoidessp. nov.Poolea is compared to Oxycnemis (Amphipyrinae, Psaphidini, Triocnemidina) and is retained in the same subtribe. Adult moths and male and female genitalia of Poolea species are illustrated along with those of Oxycnemisadvena Grote, the genus type species. Pertinent recent taxonomic changes to Amphipyrinae classification are reviewed.

12.
Insects ; 15(4)2024 Apr 09.
Artículo en Inglés | MEDLINE | ID: mdl-38667389

RESUMEN

In recent years, as more and more fossil species of berothids from Myanmar have been reported, the species and morphological diversity of Berothidae continues to increase. Herein, one new species of Berothidae, Aggregataberotha paucipunctata sp. nov., and one new genus, Sejunctaberotha gen. nov., with three new species (Sejunctaberotha sphaerica gen. et sp. nov., Sejunctaberotha tenuis gen. et sp. nov. and Sejunctaberotha transversa gen. et sp. nov.) are described from mid-Cretaceous Myanmar amber. A. paucipunctata sp. nov. is assigned to Aggregataberotha Wang, Huang & Wang, 2022, based on the characteristics of the similar female terminalia and wing venation, but can be different from A. punctate regarding the pale pterostigma and a few detailed features of wing venation. Additionally, representatives of Sejunctaberotha gen. nov. are remarkably different from the representatives of the other genera within Berothidae in the configuration of wing venation. For example, Sejunctaberotha gen. nov. has simple subcostal veinlets, obviously free Sc and RA at the apex present both in fore- and hindwings, a single ra-rp crossvein connecting the RA with RP3, a single rp-m crossvein locating before the origin of the MP, a simple CuP and no gradate veins. Interestingly, in one of the specimens of Sejunctaberotha gen. nov., a pair of spherical bulges was found at the end of the antennae. The new genus Sejunctaberotha gen. nov. suggests that Berothidae had a higher potential diversification during the Mesozoic Era.

13.
Zookeys ; 1192: 197-212, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38425444

RESUMEN

Hitherto, only two species of the thysanopteran suborder Terebrantia have been reported from mid-Cretaceous Kachin amber (Myanmar). This is here expanded through the discovery of two new genera and species, described and figured as Parallelothripsseparatusgen. et sp. nov. and Didymothripsabdominalisgen. et sp. nov., both of the family Stenurothripidae. Both taxa have key apomorphies of the Stenurothripidae, allowing for a confident assignment as to family. Both species have characteristic comb-like anteromarginal setae, which are discussed along with structural differences between the two sexes. Cycad pollen was found on the thrips' bodies, providing further evidence that Thysanoptera were pollinators of gymnosperms during the mid-Cretaceous.

14.
Zookeys ; 1193: 49-61, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38455092

RESUMEN

A new genus and species of Encyrtidae (Hymenoptera: Chalcidoidea), Apteronotus Kang, Hu & Luo, gen. nov. (type species A.indigus Kang, Hu & Luo, sp. nov.), associated with insects inhabiting Oxytropis spp., and three newly recorded species for China, Copidosomaclavatum, Ericydnusaeneus and Tetracnemuskozlovi, are described from the Altun Mountain Nature Reserve, Xinjiang. Detailed illustrations of all species were included to support the identification and further study.

15.
Insects ; 15(3)2024 Mar 08.
Artículo en Inglés | MEDLINE | ID: mdl-38535377

RESUMEN

Nippolachnus Matsumura, 1917 is a small aphid genus from the tribe Tuberolachnini (Hemiptera: Lachninae) occurring in Southeast Asia. Species from this genus are quite characteristic and stand out among lachnids for their morphology and ecological associations. We have performed a revision and phylogenetic analyses to elucidate the relationships within Nippolachnus and other representatives of Tuberolachnini. Here, the taxonomy of the genus is revised based on morphological data to include seven species, three of them newly described: Nippolachnus chakrabartiisp. nov. from India, Nippolachnus sinensissp. nov. from China, and Nippolachnus malayaensissp. nov. from Indonesia. Nippolachnus appear to be non monophyletic genus and a new genus, Indolachnusgen. nov., is described to accommodate Nippolachnus himalayensis (van der Goot, 1917) as Indolachnus himalayensis (van der Goot, 1917) comb. nov. The new genus is a sister group to the remaining Nippolachnus species, which created a monophyletic clade. Neonippolachnus Shinji, 1924 syn. nov. is recognised as a synonym of Nippolachnus, and Neonippolachnus betulae Shinji, 1924 syn. nov. as a synonym of Nippolachnus micromeli Shinji, 1924. For the first time, a scanning electron microscopy study of the sexual generation of N. piri Matsumura, 1917 has been performed. Apterous and alate viviparous females of N. bengalensis Basu and Hille Ris Lambers, 1968, N. piri, and N. micromeli, and alate viviparous females of N. xitianmushanus Zhang and Zhong, 1982 are re-described and illustrated, as well as apterous and alate viviparous females of I. himalayensiscomb. nov. Hitherto unknown morphs of N. micromeli, N. piri, and N. xitianmushanus are described. A lectotype and paralectotypes of N. xitianmushanus are designated herein. Notes on distribution and host plants are given, and keys to apterous and alate viviparous females of the genera Nippolachnus and Indolachnus are also provided.

16.
Zookeys ; 1192: 9-27, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38419745

RESUMEN

The first freshwater amphibian representative of Crinocheta (Oniscidea) from the Neotropics is described from caves within the Brazilian Cerrado biome, state of Mato Grosso do Sul. Kadiweuoniscusrebellisgen. et sp. nov. is placed in the family Philosciidae. The present work represents a significant contribution to future studies seeking to understand the ecological and evolutionary processes of Crinocheta within the Neotropical region. Moreover, it highlights the importance of biodiversity surveys in subterranean environments toward effective conservation efforts of these unique habitats and their surroundings.

17.
Mol Phylogenet Evol ; 194: 108040, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38395320

RESUMEN

Fern-spore-feeding (FSF) is rare and found in only four families of Lepidoptera. Stathmopodidae is the most speciose family that contains FSF species, and its subfamily Cuprininae exclusively specializes on FSF. However, three species of Stathmopodinae also specialize on FSF. To better understand the evolutionary history of FSF and, more generally, the significance of specialization on a peculiar host, a phylogenetic and taxonomic revision for this group is necessary. We reconstructed the most comprehensive molecular phylogeny, including one mitochondrial and four nuclear genes, of Stathmopodidae to date, including 137 samples representing 62 species, with a particular focus on the FSF subfamily, Cuprininae, including 33 species (41% of named species) from 6 of the 7 Cuprininae genera. Species from two other subfamilies, Stathmopodinae and Atkinsoniinae, were also included. We found that FSF evolved only once in Stathmopodidae and that the previous hypothesis of multiple origins of FSF was misled by inadequate taxonomy. Moreover, we showed that (1) speciation/extinction rates do not differ significantly between FSF and non-FSF groups and that (2) oligophage is the ancestral character state in Cuprininae. We further revealed that a faster rate of accumulating specialists over time, and thus a higher number of specialists, was achieved by a higher transition rate from oligophagages to specialists compared to the transition rate in the opposite direction. We finish by describing three new genera, Trigonodagen. nov., Petalagen. nov., and Pediformisgen. nov., and revalidating five genera: Cuprina, Calicotis, Thylacosceles, Actinoscelis, Thylacosceloides in Cuprininae, and we provide an updated taxonomic key to genera and a revised global checklist of Cuprininae.


Asunto(s)
Helechos , Lepidópteros , Animales , Lepidópteros/genética , Filogenia , Insectos , Esporas
18.
Zool Stud ; 62: e51, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-38046785

RESUMEN

Glyptothoa sagara gen. and sp. nov. is described from the host fish Glyptophidium macropus Alcock, 1894 (Ophidiidae), at depths 300 to 650 metres from the southwest coast of India. The mitochondrial cytochrome c oxidase subunit I (COI) gene of the species was sequenced and compared with other closely related branchial cymothoid genera. Both morphological and molecular data corroborate the inclusion of this parasitic isopod as a new genus, and we describe Glyptothoa sagara gen. and sp. nov. The following combinations of characters characterise the genus: cephalon immersed in pereonite 1; dorsum vaulted; all coxae visible in dorsal view; coxae shorter than or as long as pereonites; pereonites 4-7 slightly decrease in width towards one side, slightly asymmetrical, lateral margins slightly constricted, in hunched side; relatively wide pleon, with large lateral gaps between pleonites; antennula narrowly separated by rostrum, slender, shorter than antenna; antenna with 13 articles, buccal cone obscuring antennal bases; brood pouch arising from coxae 1-4, 6; oostegite 1 bilobed; pleopods rami all simple, without proximomedial lamellar lobe, without folds or thickened ridges. The adult life stages, such as females (ovigerous and non-ovigerous), males and transitional stage of the new species are described. The species is currently known only from the type locality and the type host. The ecological remarks of the newly described taxon are also provided. The following species are transferred from Elthusa Schioedte and Meinert, 1884: Glyptothoa myripristae (Bruce, 1990) comb. nov., Glyptothoa propinqua (Richardson, 1904) comb. nov. and Glyptothoa caudata (Schioedte and Meinert, 1884) comb. nov.

19.
Plants (Basel) ; 12(23)2023 Nov 23.
Artículo en Inglés | MEDLINE | ID: mdl-38068578

RESUMEN

A new naviculoid diatom genus, Gandhia gen. nov., was described based on a detailed morphological investigation using light and scanning electron microscopy. Gandhia obtecta (Jüttner and Cox) Kulikovskiy, Glushchenko, Iurmanov, M.Thacker, B.Karthick and Kociolek comb. nov. was previously described as a member of the genus Navicula Bory sensu lato. This species differs from other species in the genus Navicula s.l. by the presence of an internal siliceous lamina covering the alveoli and forming the image of longitudinal lines on either side of the axial area, visible in LM. The presence of this siliceous lamina is similar to laminae in genera such as Pinnularia and Gomphoneis. This unusual morphology is not typical for Navicula sensu stricto, as previously noted by other scientists. Additional investigation of Gandhia obtecta comb. nov. and Gandhia ramosissimoides (H.P. Gandhi) Kulikovskiy, Glushchenko, M.Thacker, B.Karthick and Kociolek comb. nov. from waterbodies of the Western Ghats and the Himalayan region was conducted. Comparison with other species with the same morphological features included two additional species in the genus, namely, Gandhia jakovljevicii (Hustedt) Kulikovskiy, Glushchenko, M.Thacker, B.Karthick, and Kociolek comb. nov. and Gandhia lucida (Pantocsek) Kulikovskiy, Glushchenko, M.Thacker, B.Karthick and Kociolek comb. nov. We discuss the biogeographic patterns of the species, including disjuncts between Europe and Asia.

20.
Zookeys ; 1186: 1-13, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-38107662

RESUMEN

During a nematological survey in the Western Ghats a new nematode belonging to the superfamily Tylencholaimoida (Dorylaimida) extracted from the rhizosphere of the soil of grasses, is described and illustrated. Tahaminaindicagen. nov., sp. nov. is characterized by females with a body length of 1.3-1.4 mm; lip region 8.0 µm wide, approximately one-fourth of the body diameter at the pharyngeal base; amphidial fovea cup-shaped, about one-half as wide as the lip region diameter. Odontostyle 8.0-9.0 µm long, 1.0-1.1 times lip region diameter; guiding ring simple; odontophore rod-like, 10.5-11.5 µm long with basal thickening or minute knobs-like structure; pharynx consisting of a weakly muscular anterior part, expanding abruptly into a cylindrical basal bulb, occupying about two-fifths to one-half of the total pharyngeal length; female genital system monodelphic-opisthodelphic with anterior uterine sac; vulval opening pore-like, and tail elongated with a slight dorsally curved tip. Males not found.

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