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1.
Biomolecules ; 11(9)2021 08 27.
Artículo en Inglés | MEDLINE | ID: mdl-34572495

RESUMEN

Members of the DUF34 (domain of unknown function 34) family, also known as the NIF3 protein superfamily, are ubiquitous across superkingdoms. Proteins of this family have been widely annotated as "GTP cyclohydrolase I type 2" through electronic propagation based on one study. Here, the annotation status of this protein family was examined through a comprehensive literature review and integrative bioinformatic analyses that revealed varied pleiotropic associations and phenotypes. This analysis combined with functional complementation studies strongly challenges the current annotation and suggests that DUF34 family members may serve as metal ion insertases, chaperones, or metallocofactor maturases. This general molecular function could explain how DUF34 subgroups participate in highly diversified pathways such as cell differentiation, metal ion homeostasis, pathogen virulence, redox, and universal stress responses.


Asunto(s)
GTP Fosfohidrolasas/metabolismo , Genómica , Metales/metabolismo , Chaperonas Moleculares/metabolismo , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Sitios de Unión , Análisis por Conglomerados , Biología Computacional , Escherichia coli/metabolismo , Ácido Fólico/biosíntesis , GTP Fosfohidrolasas/química , Homeostasis , Iones , Proteínas Hierro-Azufre/metabolismo , Dominios Proteicos , Publicaciones
2.
Plant Cell ; 33(10): 3367-3385, 2021 10 11.
Artículo en Inglés | MEDLINE | ID: mdl-34352110

RESUMEN

Folates are indispensable for plant development, but their molecular mode of action remains elusive. We synthesized a probe, "5-F-THF-Dayne," comprising 5-formyl-tetrahydrofolate (THF) coupled to a photoaffinity tag. Exploiting this probe in an affinity proteomics study in Arabidopsis thaliana, we retrieved 51 hits. Thirty interactions were independently validated with in vitro expressed proteins to bind 5-F-THF with high or low affinity. Interestingly, the interactors reveal associations beyond one-carbon metabolism, covering also connections to nitrogen (N) metabolism, carbohydrate metabolism/photosynthesis, and proteostasis. Two of the interactions, one with the folate biosynthetic enzyme DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 1 (AtDHFR-TS1) and another with N metabolism-associated glutamine synthetase 1;4 (AtGLN1;4), were further characterized. In silico and experimental analyses revealed G35/K36 and E330 as key residues for the binding of 5-F-THF in AtDHFR-TS1 and AtGLN1;4, respectively. Site-directed mutagenesis of AtGLN1;4 E330, which co-localizes with the ATP-binding pocket, abolished 5-F-THF binding as well as AtGLN1;4 activity. Furthermore, 5-F-THF was noted to competitively inhibit the activities of AtDHFR-TS1 and AtGLN1;4. In summary, we demonstrated a regulatory role for 5-F-THF in N metabolism, revealed 5-F-THF-mediated feedback regulation of folate biosynthesis, and identified a total of 14 previously unknown high-affinity binding cellular targets of 5-F-THF. Together, this sets a landmark toward understanding the role of folates in plant development.


Asunto(s)
Arabidopsis/metabolismo , Carbono/metabolismo , Ácido Fólico/biosíntesis , Leucovorina/metabolismo , Nitrógeno/metabolismo , Proteoma/metabolismo , Proteínas de Plantas/metabolismo
3.
Mol Cell Proteomics ; 20: 100127, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34332122

RESUMEN

Aging is associated with increased risk of ocular disease, suggesting that age-associated molecular changes in the eye increase its vulnerability to damage. Although there are common pathways involved in aging at an organismal level, different tissues and cell types exhibit specific changes in gene expression with advanced age. Drosophila melanogaster is an established model system for studying aging and neurodegenerative disease that also provides a valuable model for studying age-associated ocular disease. Flies, like humans, exhibit decreased visual function and increased risk of retinal degeneration with age. Here, we profiled the aging proteome and metabolome of the Drosophila eye and compared these data with age-associated transcriptomic changes from both eyes and photoreceptors to identify alterations in pathways that could lead to age-related phenotypes in the eye. Of note, the proteomic and metabolomic changes observed in the aging eye are distinct from those observed in the head or whole fly, suggesting that tissue-specific changes in protein abundance and metabolism occur in the aging fly. Our integration of the proteomic, metabolomic, and transcriptomic data reveals that changes in metabolism, potentially due to decreases in availability of B vitamins, together with chronic activation of the immune response, may underpin many of the events observed in the aging Drosophila eye. We propose that targeting these pathways in the genetically tractable Drosophila system may help to identify potential neuroprotective approaches for neurodegenerative and age-related ocular diseases. Data are available via ProteomeXchange with identifier PXD027090.


Asunto(s)
Envejecimiento/metabolismo , Proteínas de Drosophila/metabolismo , Proteínas del Ojo/metabolismo , Ojo/metabolismo , Ácido Fólico/biosíntesis , Mitocondrias/metabolismo , Envejecimiento/genética , Animales , Proteínas de Drosophila/genética , Drosophila melanogaster/metabolismo , Proteínas del Ojo/genética , Masculino , Metaboloma , Metabolómica , Proteómica
4.
Int J Mol Sci ; 22(4)2021 Feb 09.
Artículo en Inglés | MEDLINE | ID: mdl-33572433

RESUMEN

Methotrexate (MTX) is a commonly used antimetabolite, which inhibits folate and DNA synthesis to be effective in the treatment of various malignancies. However, MTX therapy is hindered by the lack of target tumor selectivity. We have designed, synthesized and evaluated a novel glucose-methotrexate conjugate (GLU-MTX) both in vitro and in vivo, in which a cleavable linkage allows intracellular MTX release after selective uptake through glucose transporter-1 (GLUT1). GLU-MTX inhibited the growth of colorectal (DLD-1), breast (MCF-7) and lung (A427) adenocarcinomas, squamous cell carcinoma (SCC-25), osteosarcoma (MG63) cell lines, but not in WI-38 healthy fibroblasts. In tumor cells, GLU-MTX uptake increased 17-fold compared to unconjugated MTX. 4,6-O-ethylidene-α-D-glucose (EDG), a GLUT1 inhibitor, significantly interfered with GLU-MTX induced growth inhibition, suggesting a glucose-mediated drug uptake. Glu-MTX also caused significant tumor growth delay in vivo in breast cancer-bearing mice. These results show that our GLUT-MTX conjugate can be selectively uptake by a range of tumor cells to cause their significant growth inhibition in vitro, which was also confirmed in a breast cancer model in vivo. GLUT1 inhibitor EDG interfered with these effects verifying the selective drug uptake. Accordingly, GLU-MTX offers a considerable tumor selectivity and may offer cancer growth inhibition at reduced toxicity.


Asunto(s)
Antimetabolitos Antineoplásicos/administración & dosificación , Neoplasias de la Mama/tratamiento farmacológico , Portadores de Fármacos/química , Glucosa/química , Metotrexato/administración & dosificación , Animales , Antimetabolitos Antineoplásicos/farmacocinética , Neoplasias de la Mama/patología , Línea Celular Tumoral/trasplante , Modelos Animales de Enfermedad , Liberación de Fármacos/efectos de los fármacos , Ensayos de Selección de Medicamentos Antitumorales , Femenino , Ácido Fólico/biosíntesis , Transportador de Glucosa de Tipo 1/antagonistas & inhibidores , Transportador de Glucosa de Tipo 1/metabolismo , Humanos , Inyecciones Intravenosas , Metotrexato/farmacocinética , Ratones
5.
J Appl Microbiol ; 130(5): 1412-1424, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-32955761

RESUMEN

Lactic acid bacteria (LAB), widely used as starter cultures for the fermentation of a large variety of food, can improve the safety, shelf life, nutritional value and overall quality of the fermented products. In this regard, the selection of strains delivering health-promoting compounds is now the main objective of many researchers. Although most LAB are auxotrophic for several vitamins, it is known that certain strains have the capability to synthesize B-group vitamins. This is an important property since humans cannot synthesize most vitamins, and these could be obtained by consuming LAB fermented foods. This review discusses the use of LAB as an alternative to fortification by the chemical synthesis to increase riboflavin and folate concentrations in food. Moreover, it provides an overview of the recent applications of vitamin-producing LAB with anti-inflammatory/antioxidant activities against gastrointestinal tract inflammation. This review shows the potential uses of riboflavin and folates producing LAB for the biofortification of food, as therapeutics against intestinal pathologies and to complement anti-inflammatory/anti-neoplastic treatments.


Asunto(s)
Ácido Fólico/biosíntesis , Alimentos Fortificados , Enfermedades Inflamatorias del Intestino/terapia , Lactobacillales/metabolismo , Mucositis/terapia , Riboflavina/biosíntesis , Animales , Antioxidantes/análisis , Fermentación , Alimentos Fermentados , Ácido Fólico/análisis , Humanos , Lactobacillales/aislamiento & purificación , Riboflavina/análisis , Vitaminas/análisis , Vitaminas/biosíntesis
6.
Microb Genom ; 6(11)2020 11.
Artículo en Inglés | MEDLINE | ID: mdl-32969787

RESUMEN

Trimethoprim is a synthetic antibacterial agent that targets folate biosynthesis by competitively binding to the di-hydrofolate reductase enzyme (DHFR). Trimethoprim is often administered synergistically with sulfonamide, another chemotherapeutic agent targeting the di-hydropteroate synthase (DHPS) enzyme in the same pathway. Clinical resistance to both drugs is widespread and mediated by enzyme variants capable of performing their biological function without binding to these drugs. These mutant enzymes were assumed to have arisen after the discovery of these synthetic drugs, but recent work has shown that genes conferring resistance to sulfonamide were present in the bacterial pangenome millions of years ago. Here, we apply phylogenetics and comparative genomics methods to study the largest family of mobile trimethoprim-resistance genes (dfrA). We show that most of the dfrA genes identified to date map to two large clades that likely arose from independent mobilization events. In contrast to sulfonamide resistance (sul) genes, we find evidence of recurrent mobilization in dfrA genes. Phylogenetic evidence allows us to identify novel dfrA genes in the emerging pathogen Acinetobacter baumannii, and we confirm their resistance phenotype in vitro. We also identify a cluster of dfrA homologues in cryptic plasmid and phage genomes, but we show that these enzymes do not confer resistance to trimethoprim. Our methods also allow us to pinpoint the chromosomal origin of previously reported dfrA genes, and we show that many of these ancient chromosomal genes also confer resistance to trimethoprim. Our work reveals that trimethoprim resistance predated the clinical use of this chemotherapeutic agent, but that novel mutations have likely also arisen and become mobilized following its widespread use within and outside the clinic. Hence, this work confirms that resistance to novel drugs may already be present in the bacterial pangenome, and stresses the importance of rapid mobilization as a fundamental element in the emergence and global spread of resistance determinants.


Asunto(s)
Acinetobacter baumannii/genética , Antibacterianos/farmacología , Tetrahidrofolato Deshidrogenasa/genética , Resistencia al Trimetoprim/genética , Trimetoprim/farmacología , Acinetobacter baumannii/efectos de los fármacos , Acinetobacter baumannii/aislamiento & purificación , Evolución Biológica , Escherichia coli/efectos de los fármacos , Escherichia coli/genética , Ácido Fólico/biosíntesis , Humanos , Pruebas de Sensibilidad Microbiana , Sulfonamidas/farmacología
7.
mSphere ; 5(3)2020 06 24.
Artículo en Inglés | MEDLINE | ID: mdl-32581079

RESUMEN

While the folate biosynthetic pathway has provided a rich source of antibacterial, antiprotozoal, and anticancer therapies, it has not yet been exploited to develop uniquely antifungal agents. Although there have been attempts to develop fungal-specific inhibitors of dihydrofolate reductase (DHFR), the protein itself has not been unequivocally validated as essential for fungal growth or virulence. The purpose of this study was to establish dihydrofolate reductase as a valid antifungal target. Using a strain with doxycycline-repressible transcription of DFR1 (PTETO-DFR1 strain), we were able to demonstrate that Dfr1p is essential for growth in vitro Furthermore, nutritional supplements of most forms of folate are not sufficient to restore growth when Dfr1p expression is suppressed or when its activity is directly inhibited by methotrexate, indicating that Candida albicans has a limited capacity to acquire or utilize exogenous sources of folate. Finally, the PTETO-DFR1 strain was rendered avirulent in a mouse model of disseminated candidiasis upon doxycycline treatment. Collectively, these results confirm the validity of targeting dihydrofolate reductase and, by inference, other enzymes in the folate biosynthetic pathway as a strategy to devise new and efficacious therapies to combat life-threatening invasive fungal infections.IMPORTANCE The folate biosynthetic pathway is a promising and understudied source for novel antifungals. Even dihydrofolate reductase (DHFR), a well-characterized and historically important drug target, has not been conclusively validated as an antifungal target. Here, we demonstrate that repression of DHFR inhibits growth of Candida albicans, a major human fungal pathogen. Methotrexate, an antifolate, also inhibits growth but through pH-dependent activity. In addition, we show that C. albicans has a limited ability to take up or utilize exogenous folates as only the addition of high concentrations of folinic acid restored growth in the presence of methotrexate. Finally, we show that repression of DHFR in a mouse model of infection was sufficient to eliminate host mortality. Our work conclusively establishes DHFR as a valid antifungal target in C. albicans.


Asunto(s)
Antifúngicos/farmacología , Candida albicans/efectos de los fármacos , Candida albicans/enzimología , Proteínas Fúngicas/antagonistas & inhibidores , Tetrahidrofolato Deshidrogenasa/metabolismo , Animales , Vías Biosintéticas , Candida albicans/patogenicidad , Candidiasis/tratamiento farmacológico , Desarrollo de Medicamentos/métodos , Femenino , Ácido Fólico/biosíntesis , Antagonistas del Ácido Fólico/farmacología , Humanos , Ratones , Ratones Endogámicos BALB C , Pruebas de Sensibilidad Microbiana , Virulencia
8.
Probiotics Antimicrob Proteins ; 12(4): 1439-1450, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-32462507

RESUMEN

Several species of eukaryotic organisms living in the high mountain areas of Armenia with naturally occurring levels of radiation have high adaptive responses to radiation. We speculate on the role of the gastrointestinal microbiota in this protection against radiation. Therefore, seventeen microorganisms with high antagonistic activities against several multi-drug-resistant pathogens were isolated from the human and animal gut microbiota, as well as from traditional Armenian fermented products. These strains were tested in vivo on Wistar rats to determine their ability to protect the eukaryotic host against radiation damages. The efficiency of the probiotics' application and the dependence on pre- and post-radiation nutrition of rats were described. The effects of Lactobacillus rhamnosus Vahe, isolated from a healthy breastfed infant, and Lactobacillus delbrueckii IAHAHI, isolated from the fermented dairy product matsuni, on the survival of irradiated rats, and their blood leucocyte and glucose levels, were considered to be the most promising, based on this study's results.


Asunto(s)
Microbioma Gastrointestinal/fisiología , Lacticaseibacillus rhamnosus/metabolismo , Lactobacillus delbrueckii/metabolismo , Probióticos/farmacología , Traumatismos por Radiación/prevención & control , Tolerancia a Radiación/efectos de los fármacos , Animales , Biotina/biosíntesis , Productos Lácteos Cultivados , Ácido Fólico/biosíntesis , Humanos , Lactobacillus delbrueckii/crecimiento & desarrollo , Lacticaseibacillus rhamnosus/crecimiento & desarrollo , Recuento de Leucocitos , Masculino , Estado Nutricional/fisiología , Estado Nutricional/efectos de la radiación , Dosis de Radiación , Traumatismos por Radiación/metabolismo , Traumatismos por Radiación/microbiología , Traumatismos por Radiación/mortalidad , Tolerancia a Radiación/fisiología , Radiometría , Ratas , Ratas Wistar , Riboflavina/biosíntesis , Análisis de Supervivencia , Vitamina B 6/biosíntesis , Irradiación Corporal Total , Rayos X
9.
Genomics ; 112(5): 3142-3149, 2020 09.
Artículo en Inglés | MEDLINE | ID: mdl-32450257

RESUMEN

Lactic acid bacteria have been attracting increased attentions recent years because of harboring probiotic properties. In present study, a Lactobacillus pentosus strain ZFM94 was screened from healthy infant feces and its probiotic characteristics were investigated. We found that ZFM94 was resistant to environmental stresses (temperature, pH and NaCl), tolerant to gastrointestinal juice and bile salts, with inhibitory action against pathogens and capacity of folate production etc. Additionally, complete genome sequence of the strain was analyzed to highlight the probiotic features at genetic level. Genomic characteristics along with the experimental studies is critically important for building an appropriate probiotic profile of novel strains. Genes that correspond to phenotypes mentioned above were identified. Moreover, genes potentially related to its adaptation, such as carbon metabolism and carbohydrate transporter, carbohydrate-active enzymes, and a novel gene cluster RaS-RiPPs, were also revealed. Together, ZFM94 could be considered as a potential probiotic candidate.


Asunto(s)
Genoma Bacteriano , Lactobacillus pentosus/genética , Probióticos , Antibacterianos/metabolismo , Adhesión Bacteriana , Metabolismo de los Hidratos de Carbono/genética , Carbono/metabolismo , Ácido Fólico/biosíntesis , Jugo Gástrico , Genómica , Humanos , Lactante , Lactobacillus pentosus/enzimología , Lactobacillus pentosus/aislamiento & purificación , Lactobacillus pentosus/metabolismo , Proteínas de Transporte de Membrana/genética , Péptidos/genética , Filogenia , Estrés Fisiológico
10.
FEMS Microbiol Lett ; 367(9)2020 05 01.
Artículo en Inglés | MEDLINE | ID: mdl-32275307

RESUMEN

Lactic acid bacteria (LAB) can be used to increase the folate in foods by in situ fortification. Seventy LAB were screened for their ability to produce folate during growth in de Man, Rogosa and Sharpe/M17 broth. Lactobacillus casei, Lactobacillus plantarum, Lactobacillus paracasei subsp. paracasei, Lactobacillus rhamnosus, Lactobacillus delbrueckii subsp. bulgaricus, Streptococcus thermophilus, Lactococcus lactis subsp. lactis, Enterococcus faecium and Enterococcus lactis were able to synthetize folates in the medium, even if to a different extent. The 47 folate-producing strains were further analyzed by microbiological assay, for total, extra and intracellular folate. Enterococcus faecium VC223 and E. lactis BT161 were able to produce in cultural medium 123,625.74 ± 8.00 ng/ml and 384.22 ± 5.00 ng/ml of folate, respectively. Five strains were further examined for their ability to synthesize folate in cheese. The folate content increased with ripening up to by 54% after 30 d when L. casei VC199 was used and up to 108% and 113% after 60 d, with L. paracasei SE160 and E. lactis BT161 respectively exceeding 100 ng/100g. Results encourage the use of specific LAB to obtain natural folate bio-enriched dairy products improving folate intake.


Asunto(s)
Queso/microbiología , Ácido Fólico/biosíntesis , Microbiología de Alimentos , Lactobacillales/crecimiento & desarrollo , Lactobacillales/metabolismo , Enterococcus/crecimiento & desarrollo , Enterococcus/metabolismo , Lactobacillales/aislamiento & purificación , Lactobacillus/crecimiento & desarrollo , Lactobacillus/metabolismo , Lactococcus/crecimiento & desarrollo , Lactococcus/metabolismo , Streptococcus/crecimiento & desarrollo , Streptococcus/metabolismo , Vitaminas/biosíntesis
11.
Appl Microbiol Biotechnol ; 104(8): 3331-3337, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-32112134

RESUMEN

Recent studies have shown that inflammatory diseases are becoming more frequent throughout the world. The causes of these disorders are multifactorial and include genetic, immunological, and environmental factors, and intestinal microbiota dysbiosis. The use of beneficial microorganisms has shown to be useful in the prevention and treatment of disorders such as colitis, mucositis, and even colon cancer by their immune-stimulating properties. It has also been shown that certain vitamins, especially riboflavin and folate derivatives, have proven to be helpful in the treatment of these diseases. The application of vitamin-producing lactic acid bacteria, especially strains that produce folate and riboflavin together with immune-stimulating strains, could be used as adjunct treatments in patients suffering from a wide range of inflammatory diseases since they could improve treatment efficiency and prevent undesirable side effects in addition to their nutrition values. In this review, the most up to date information on the current knowledge and uses of vitamin-producing lactic acid bacteria is discussed in order to stimulate further studies in this field.


Asunto(s)
Inflamación/terapia , Enfermedades Inflamatorias del Intestino/terapia , Lactobacillales/metabolismo , Probióticos/uso terapéutico , Vitaminas/biosíntesis , Animales , Antiinflamatorios/uso terapéutico , Ensayos Clínicos como Asunto , Colitis/tratamiento farmacológico , Ácido Fólico/biosíntesis , Humanos , Inflamación/complicaciones , Enfermedades Inflamatorias del Intestino/clasificación , Riboflavina/biosíntesis , Vitamina K
12.
Gut Microbes ; 11(4): 820-841, 2020 07 03.
Artículo en Inglés | MEDLINE | ID: mdl-31955643

RESUMEN

Infection with Helicobacter pylori causes chronic inflammation and is a risk factor for gastric cancer. Antibiotic treatment or increased dietary folate prevents gastric carcinogenesis in male INS-GAS mice. To determine potential synergistic effects, H. pylori-infected male INS-GAS mice were fed an amino acid defined (AAD) diet with increased folate and were treated with antibiotics after 18 weeks of H. pylori infection. Antibiotic therapy decreased gastric pathology, but dietary folate had no effect. However, the combination of antibiotics and the AAD diet induced anemia, gastric hemorrhage, and mortality. Clinical presentation suggested hypovitaminosis K potentially caused by dietary deficiency and dysbiosis. Based on current dietary guidelines, the AAD diet was deficient in vitamin K. Phylloquinone administered subcutaneously and via a reformulated diet led to clinical improvement with no subsequent mortalities and increased hepatic vitamin K levels. We characterized the microbiome and menaquinone profiles of antibiotic-treated and antibiotic-free mice. Antibiotic treatment decreased the abundance of menaquinone producers within orders Bacteroidales and Verrucomicrobiales. PICRUSt predicted decreases in canonical menaquinone biosynthesis genes, menA and menD. Reduction of menA from Akkermansia muciniphila, Bacteroides uniformis, and Muribaculum intestinale were confirmed in antibiotic-treated mice. The fecal menaquinone profile of antibiotic-treated mice had reduced MK5 and MK6 and increased MK7 and MK11 compared to antibiotic-free mice. Loss of menaquinone-producing microbes due to antibiotics altered the enteric production of vitamin K. This study highlights the role of diet and the microbiome in maintaining vitamin K homeostasis.


Asunto(s)
Antibacterianos/uso terapéutico , Disbiosis/etiología , Alimentos Formulados/efectos adversos , Hemorragia Gastrointestinal/etiología , Microbioma Gastrointestinal , Infecciones por Helicobacter/tratamiento farmacológico , Deficiencia de Vitamina K/etiología , Aminoácidos/administración & dosificación , Anemia/dietoterapia , Anemia/etiología , Animales , Antibacterianos/efectos adversos , Bacterias/efectos de los fármacos , Bacterias/genética , Bacterias/metabolismo , Dieta , Suplementos Dietéticos , Ácido Fólico/administración & dosificación , Ácido Fólico/biosíntesis , Ácido Fólico/genética , Microbioma Gastrointestinal/efectos de los fármacos , Infecciones por Helicobacter/microbiología , Helicobacter pylori/efectos de los fármacos , Hígado/metabolismo , Masculino , Ratones , Vitamina K 1/administración & dosificación , Vitamina K 1/metabolismo , Vitamina K 2/metabolismo
13.
Probiotics Antimicrob Proteins ; 12(4): 1524-1541, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-31981112

RESUMEN

The genus Streptococcus includes various species, remarkably different in their behavior, applications, virulence, and safety. Taxonomically Streptococcus infantarius subsp. infantarius belonging to the Streptococcus bovis group, which includes several pathogen species, however, has been found as predominant species in some African dairy products that are widely consumed and considered to be safe. Streptococcus infantarius subsp. infantarius' safety may be questioned due to the association of this species with clinical cases. In this study, isolates from dairy origin were selected based on their bacteriocinogenic potential and differentiated by their RAPD-PCR profiles. Two strains were identified by 16S rRNA sequencing as St. infantarius subsp. infantarius and investigated regarding their potential beneficial properties and factors related to virulence and safety. A series of in vitro tests included properties related to survival in the gastrointestinal tract and beneficial intestinal activities. Production of bacteriocin/s, detection of related genes, and partial characterization of expressed antimicrobial protein were evaluated. Genes related to folate biosynthesis were detected in both studied strains. Evaluation of physiological tests related to strains virulence, adhesion, and resistance to antibiotics and detections of virulence and biogenic amines production-related genes were also investigated. Taking in consideration all the aspects of the specific nature of St. infantarius subsp. infantarius K1-4 and K5-1 (beneficial properties and virulence characteristics), both strains cannot be considered safe for human or other animals application, even though they have been isolated from dairy products. This study is highlighting the importance of evaluation for presence of potential virulence factors in newly characterized strains in order to be confident in their safety.


Asunto(s)
Bacteriocinas/farmacología , Leche/microbiología , Streptococcus/genética , Streptococcus/patogenicidad , Factores de Virulencia/farmacología , Animales , Antibacterianos/farmacología , Adhesión Bacteriana/efectos de los fármacos , Bacteriocinas/biosíntesis , Materiales Biomiméticos/farmacología , Brasil , Farmacorresistencia Bacteriana/genética , Escherichia coli/efectos de los fármacos , Escherichia coli/crecimiento & desarrollo , Femenino , Ácido Fólico/biosíntesis , Jugo Gástrico/química , Cabras , Humanos , Listeria/efectos de los fármacos , Listeria/crecimiento & desarrollo , Pruebas de Sensibilidad Microbiana , Filogenia , ARN Ribosómico 16S/genética , Técnica del ADN Polimorfo Amplificado Aleatorio , Salmonella/efectos de los fármacos , Salmonella/crecimiento & desarrollo , Staphylococcus/efectos de los fármacos , Staphylococcus/crecimiento & desarrollo , Streptococcus/efectos de los fármacos , Streptococcus/aislamiento & purificación , Virulencia , Factores de Virulencia/biosíntesis
14.
Clin Transl Oncol ; 22(8): 1227-1239, 2020 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-31919760

RESUMEN

The previous reports have established a strong link between diet, lifestyle, and gut microbiota population with the onset of the colorectal cancer (CRC). Administration of probiotics has become a particular interest in prevention and treatment of CRC. As potential dietary complements, probiotics might be able to lower the risk of CRC and manage the safety of traditional cancer therapies such as surgery, radiation therapy, and chemotherapy. This review investigates the promising effects of probiotics as biotherapeutics, with due attention to possible clinical application of yeast probiotics in prevention and treatment of CRC. In addition, various underlying anti-cancer mechanisms are covered here based on scientific evidence and findings from numerous experimental studies. Application of probiotics as biotherapeutics in CRC, however, needs to be approved by human clinical trials. It is of prime concern, to find potential probiotic strains, effective doses for administrations and regimes, and molecular mechanisms involved in prevention and treatment.


Asunto(s)
Neoplasias Colorrectales/prevención & control , Probióticos/uso terapéutico , Levaduras , Antineoplásicos/uso terapéutico , Ensayos Clínicos como Asunto , Neoplasias Colorrectales/etiología , Neoplasias Colorrectales/terapia , Bases de Datos Factuales , Progresión de la Enfermedad , Ácido Fólico/biosíntesis , Microbioma Gastrointestinal , Humanos , Inflamación/prevención & control , Sistema de Señalización de MAP Quinasas/fisiología , Probióticos/efectos adversos , Saccharomyces boulardii/fisiología , Saccharomyces cerevisiae/fisiología , Transducción de Señal , Levaduras/fisiología , beta-Glucanos/metabolismo
15.
J Immunotoxicol ; 17(1): 10-20, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-31909636

RESUMEN

Mucosal-associated invariant T-cells (MAIT) can react to metabolites of the vitamins riboflavin and folate which are produced by the human gut microbiota. Since several studies showed that the pesticide chlorpyrifos (CPF) and glyphosate (GLP) can impair the gut microbiota, the present study was undertaken to investigate the impact of CPF and GLP treatment on the metabolism of gut microbiota and the resulting bacteria-mediated modulation of MAIT cell activity. Here, Bifidobacterium adolescentis (B. adolescentis), Lactobacillus reuteri (L. reuteri), and Escherichia coli (E. coli) were treated with CPF (50-200 µM) or GLP (75-300 mg/L) and then used in MAIT cell stimulation assays as well as in vitamin and proteome analyses. All three bacteria were nonpathogenic and chosen as representatives of a healthy human gut microflora. The results showed that E. coli activated MAIT cells whereas B. adolescentis and L. reuteri inhibited MAIT cell activation. CPF treatment significantly increased E. coli-mediated MAIT cell activation. Treatment of B. adolescentis and L. reuteri with CPF and GLP weakened the inhibition of MAIT cell activation. Riboflavin and folate production by the test bacteria was influenced by CPF treatment, whereas GLP had only minor effects. Proteomic analysis of CPF-treated E. coli revealed changes in the riboflavin and folate biosynthesis pathways. The findings here suggest that the metabolism of the analyzed bacteria could be altered by exposure to CPF and GLP, leading to an increased pro-inflammatory immune response.


Asunto(s)
Microbioma Gastrointestinal/efectos de los fármacos , Herbicidas/toxicidad , Insecticidas/toxicidad , Activación de Linfocitos/efectos de los fármacos , Células T Invariantes Asociadas a Mucosa/inmunología , Bifidobacterium adolescentis/efectos de los fármacos , Bifidobacterium adolescentis/inmunología , Bifidobacterium adolescentis/metabolismo , Vías Biosintéticas/efectos de los fármacos , Vías Biosintéticas/inmunología , Capa Leucocitaria de la Sangre/citología , Cloropirifos/toxicidad , Escherichia coli/efectos de los fármacos , Escherichia coli/inmunología , Escherichia coli/metabolismo , Ácido Fólico/análisis , Ácido Fólico/biosíntesis , Microbioma Gastrointestinal/inmunología , Glicina/análogos & derivados , Glicina/toxicidad , Voluntarios Sanos , Interacciones Microbiota-Huesped/efectos de los fármacos , Interacciones Microbiota-Huesped/inmunología , Humanos , Mucosa Intestinal/inmunología , Mucosa Intestinal/microbiología , Limosilactobacillus reuteri/efectos de los fármacos , Limosilactobacillus reuteri/inmunología , Limosilactobacillus reuteri/metabolismo , Activación de Linfocitos/inmunología , Proteómica , Riboflavina/análisis , Riboflavina/biosíntesis , Glifosato
16.
ACS Chem Biol ; 14(12): 2841-2850, 2019 12 20.
Artículo en Inglés | MEDLINE | ID: mdl-31609568

RESUMEN

Various riboswitch classes are being discovered that precisely monitor the status of important biological processes, including metabolic pathway function, signaling for physiological adaptations, and responses to toxic agents. Biochemical components for some of these processes might make excellent targets for the development of novel antibacterial molecules, which can be broadly sought by using phenotypic drug discovery (PDD) methods. However, PDD data do not normally provide clues regarding the target for each hit compound. We have developed and validated a robust fluorescent reporter system based on a ZTP riboswitch that identifies numerous folate biosynthesis inhibitors with high sensitivity and precision. The utility of the riboswitch-based PDD strategy was evaluated using Escherichia coli bacteria by conducting a 128 310-compound high-throughput screen, which identified 78 sulfanilamide derivatives among the many initial hits. Similarly, representatives of other riboswitch classes could be employed to rapidly match antibacterial hits with the biological processes they target.


Asunto(s)
Escherichia coli/metabolismo , Antagonistas del Ácido Fólico/farmacología , Ácido Fólico/biosíntesis , Ensayos Analíticos de Alto Rendimiento/métodos , Riboswitch , Antibacterianos/química , Antibacterianos/farmacología , Bacterias/efectos de los fármacos , Descubrimiento de Drogas , Antagonistas del Ácido Fólico/química , Reproducibilidad de los Resultados , Relación Estructura-Actividad
17.
Nature ; 571(7763): 72-78, 2019 07.
Artículo en Inglés | MEDLINE | ID: mdl-31217586

RESUMEN

New antibiotics are needed to combat rising levels of resistance, with new Mycobacterium tuberculosis (Mtb) drugs having the highest priority. However, conventional whole-cell and biochemical antibiotic screens have failed. Here we develop a strategy termed PROSPECT (primary screening of strains to prioritize expanded chemistry and targets), in which we screen compounds against pools of strains depleted of essential bacterial targets. We engineered strains that target 474 essential Mtb genes and screened pools of 100-150 strains against activity-enriched and unbiased compound libraries, probing more than 8.5 million chemical-genetic interactions. Primary screens identified over tenfold more hits than screening wild-type Mtb alone, with chemical-genetic interactions providing immediate, direct target insights. We identified over 40 compounds that target DNA gyrase, the cell wall, tryptophan, folate biosynthesis and RNA polymerase, as well as inhibitors that target EfpA. Chemical optimization yielded EfpA inhibitors with potent wild-type activity, thus demonstrating the ability of PROSPECT to yield inhibitors against targets that would have eluded conventional drug discovery.


Asunto(s)
Antituberculosos/clasificación , Antituberculosos/aislamiento & purificación , Descubrimiento de Drogas/métodos , Eliminación de Gen , Pruebas de Sensibilidad Microbiana/métodos , Mycobacterium tuberculosis/efectos de los fármacos , Mycobacterium tuberculosis/genética , Bibliotecas de Moléculas Pequeñas/farmacología , Antituberculosos/farmacología , Girasa de ADN/metabolismo , Farmacorresistencia Microbiana , Ácido Fólico/biosíntesis , Terapia Molecular Dirigida , Mycobacterium tuberculosis/citología , Mycobacterium tuberculosis/enzimología , Ácidos Micólicos/metabolismo , Reproducibilidad de los Resultados , Bibliotecas de Moléculas Pequeñas/clasificación , Bibliotecas de Moléculas Pequeñas/aislamiento & purificación , Especificidad por Sustrato , Inhibidores de Topoisomerasa II/aislamiento & purificación , Inhibidores de Topoisomerasa II/farmacología , Triptófano/biosíntesis , Tuberculosis/tratamiento farmacológico , Tuberculosis/microbiología
18.
mBio ; 10(3)2019 06 04.
Artículo en Inglés | MEDLINE | ID: mdl-31164458

RESUMEN

Many symbionts supplement their host's diet with essential nutrients. However, whether these nutrients also enhance parasitism is unknown. In this study, we investigated whether folate (vitamin B9) production by the tsetse fly (Glossina spp.) essential mutualist, Wigglesworthia, aids auxotrophic African trypanosomes in completing their life cycle within this obligate vector. We show that the expression of Wigglesworthia folate biosynthesis genes changes with the progression of trypanosome infection within tsetse. The disruption of Wigglesworthia folate production caused a reduction in the percentage of flies that housed midgut (MG) trypanosome infections. However, decreased folate did not prevent MG trypanosomes from migrating to and establishing an infection in the fly's salivary glands, thus suggesting that nutrient requirements vary throughout the trypanosome life cycle. We further substantiated that trypanosomes rely on symbiont-generated folate by feeding this vitamin to Glossina brevipalpis, which exhibits low trypanosome vector competency and houses Wigglesworthia incapable of producing folate. Folate-supplemented G. brevipalpis flies were significantly more susceptible to trypanosome infection, further demonstrating that this vitamin facilitates parasite infection establishment. Our cumulative results provide evidence that Wigglesworthia provides a key metabolite (folate) that is "hijacked" by trypanosomes to enhance their infectivity, thus indirectly impacting tsetse species vector competency. Parasite dependence on symbiont-derived micronutrients, which likely also occurs in other arthropod vectors, represents a relationship that may be exploited to reduce disease transmission.IMPORTANCE Parasites elicit several physiological changes in their host to enhance transmission. Little is known about the functional association between parasitism and microbiota-provisioned resources typically dedicated to animal hosts and how these goods may be rerouted to optimize parasite development. This study is the first to identify a specific symbiont-generated metabolite that impacts insect vector competence by facilitating parasite establishment and, thus, eventual transmission. Specifically, we demonstrate that the tsetse fly obligate mutualist Wigglesworthia provisions folate (vitamin B9) that pathogenic African trypanosomes exploit in an effort to successfully establish an infection in the vector's MG. This process is essential for the parasite to complete its life cycle and be transmitted to a new vertebrate host. Disrupting metabolic contributions provided by the microbiota of arthropod disease vectors may fuel future innovative control strategies while also offering minimal nontarget effects.


Asunto(s)
Ácido Fólico/biosíntesis , Simbiosis , Trypanosoma/fisiología , Moscas Tse-Tse/microbiología , Moscas Tse-Tse/parasitología , Wigglesworthia/metabolismo , Animales , Vías Biosintéticas , Femenino , Tracto Gastrointestinal/parasitología , Interacciones Huésped-Parásitos , Masculino
19.
Sci Rep ; 9(1): 5731, 2019 04 05.
Artículo en Inglés | MEDLINE | ID: mdl-30952916

RESUMEN

Tetrahydrofolate and its derivatives, commonly known as folates, are essential for almost all living organisms. Besides acting as one-carbon donors and acceptors in reactions producing various important biomolecules such as nucleic and amino acids, as well as pantothenate, they also supply one-carbon units for methylation reactions. Plants along with bacteria, yeast and fungi synthesize folates de novo and therefore constitute a very important dietary source of folates for animals. All the major steps of folate biosynthesis and metabolism have been identified but only few have been genetically characterized in a handful of model plant species. The possible differences in the folate pathway between various plant and algal species have never been explored. In this study we present a comprehensive comparative study of folate biosynthesis and metabolism of all major land plant lineages as well as green and red algae. The study identifies new features of plant folate metabolism that might open new directions to folate research in plants.


Asunto(s)
Chlorophyta/metabolismo , Embryophyta/metabolismo , Evolución Molecular , Ácido Fólico/metabolismo , Rhodophyta/metabolismo , Ácido Fólico/biosíntesis
20.
Food Microbiol ; 79: 20-26, 2019 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-30621871

RESUMEN

Mandatory fortification of foods with folic acid is being questioned by many scientists principally because of the potential adverse secondary effects associated with their excessive consumption. It has been shown that selected strains of lactic acid bacteria (LAB) are able to produce natural forms of folate and these could be included in foods to prevent deficiencies without causing adverse effects. The aim of this study was to evaluate folate production and fol gene expression by Streptococcus gallolyticus subsp. macedonicus (S. macedonicus) CRL415 under different growth conditions in vitro and to assess its potential probiotic application. Results showed that glucose as the principal carbon source, and incubation at 42 °C under controlled pH conditions (6.0) increased folate production, fol gene expression, and growth of S. macedonicus CRL415. This strain was able to produce elevated folate concentrations during milk fermentation without the need of prolonged incubation times and was able to resist conditions simulating the gastrointestinal tract. In addition, S. macedonicus was susceptible to all required antibiotics, and had a good adhesion level to intestinal cells in vitro, making it a promising candidate for biotechnological application as functional starter cultures in the dairy industry.


Asunto(s)
Ácido Fólico/biosíntesis , Probióticos/metabolismo , Streptococcus/metabolismo , Ácido 4-Aminobenzoico/metabolismo , Animales , Antibacterianos/farmacología , Adhesión Bacteriana , Bilis , Células CACO-2 , Productos Lácteos Cultivados/análisis , Productos Lácteos Cultivados/microbiología , Ácido Fólico/genética , Jugo Gástrico , Regulación Bacteriana de la Expresión Génica , Glucosa/metabolismo , Humanos , Concentración de Iones de Hidrógeno , Pruebas de Sensibilidad Microbiana , Viabilidad Microbiana/efectos de los fármacos , Streptococcus/genética , Streptococcus/crecimiento & desarrollo , Temperatura
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