RESUMEN
We previously engineered Escherichia coli to overproduce medium- to long-chain saturated and monounsaturated methyl ketones, which could potentially be applied as diesel fuel blending agents or in the flavor and fragrance industry. Recent efforts at strain optimization have focused on cofactor balance, as fatty acid-derived pathways face the systematic metabolic challenge of net NADPH consumption (in large part, resulting from the key fatty acid biosynthetic enzyme FabG [ß-ketoacyl-ACP reductase]) and net NADH production. In this study, we attempted to mitigate cofactor imbalance by heterologously expressing NADH-dependent, rather than NADPH-dependent, versions of FabG identified in previous studies. Of the four NADH-dependent versions of FabG tested in our previously best-reported methyl ketone-producing strain (EGS1895), the version from Acholeplasma laidlawii (Al_FabG) showed the greatest increase in methyl ketone yield in shake flasks (35-75% higher than for an RFP negative-control strain, depending on sugar loading). An improved strain (EGS2920) attained methyl ketone titers during fed-batch fermentation of 5.4 ± 0.5 g/L, which were, on average, ca. 40% greater than those for the base strain (EGS1895) under fermentation conditions optimized in this study. Shotgun proteomic data for strains EGS2920 and EGS1895 during fed-batch fermentation were consistent with the goal of alleviating NADPH limitation through expression of Al_FabG. For example, relative to strain EGS1895, strain EGS2920 significantly upregulated glucose-6-phosphate isomerase (directing flux into glycolysis rather than the NADPH-producing pentose phosphate pathway) and downregulated MaeB (a NADP+ -dependent malate dehydrogenase). Overall, the results suggest that heterologous expression of NADH-dependent FabG in E. coli may improve sustained production of fatty acid-derived renewable fuels and chemicals.
Asunto(s)
Oxidorreductasas de Alcohol/biosíntesis , Coenzimas/metabolismo , Escherichia coli/metabolismo , Cetonas/metabolismo , NAD/metabolismo , Proteínas Recombinantes/biosíntesis , Acholeplasma laidlawii/enzimología , Acholeplasma laidlawii/genética , Oxidorreductasas de Alcohol/genética , Escherichia coli/enzimología , Escherichia coli/genética , Ácidos Grasos/metabolismo , Fermentación , Expresión Génica , Proteínas Recombinantes/genéticaRESUMEN
Glucolipids in Bacillus subtilis are synthesized by UgtP processively transferring glucose from UDP-glucose to diacylglycerol. Here we conclude that the abnormal morphology of a ugtP mutant is caused by lack of glucolipids, since the same morphology arises after abolition of glucolipid production by disruption of pgcA and gtaB, which are involved in UDP-glucose synthesis. Conversely, expression of a monoglucosyldiacylglycerol (MGlcDG) produced by 1,2-diacylglycerol 3-glucosyltransferase from Acholeplasma laidlawii (alMGS) almost completely suppressed the ugtP disruptant phenotype. Activation of extracytoplasmic function (ECF) sigmas (SigM, SigV, and SigX) in the ugtP mutant was decreased by alMGS expression, and was suppressed to low levels by MgSO4 addition. When alMGS and alDGS (A. laidlawii 1,2-diacylglycerol-3-glucose (1-2)-glucosyltransferase producing diglucosyldiacylglycerol (DGlcDG)) were simultaneously expressed, SigX activation was repressed to wild type level. These observations suggest that MGlcDG molecules are required for maintenance of B. subtilis cell shape and regulation of ECF sigmas, and DGlcDG regulates SigX activity.
Asunto(s)
Acholeplasma laidlawii/enzimología , Bacillus subtilis/citología , Bacillus subtilis/genética , Glucosiltransferasas/genética , Mutación , Factor sigma/metabolismo , Acholeplasma laidlawii/genética , Bacillus subtilis/metabolismo , Expresión Génica , Glucosiltransferasas/metabolismo , Uridina Difosfato Glucosa/metabolismoRESUMEN
The Cpx stress response system is induced by various environmental and cellular stimuli. It is also activated in Escherichia coli strains lacking the major phospholipid, phosphatidylethanolamine (PE). However, it is not known whether CpxA directly senses changes in the lipid bilayer or the presence of misfolded proteins due to the lack of PE in their membranes. To address this question, we used an in vitro reconstitution system and vesicles with different lipid compositions to track modulations in the activity of CpxA in different lipid bilayers. Moreover, the Cpx response was validated in vivo by monitoring expression of a PcpxP-gfp reporter in lipid-engineered strains of E. coli. Our combined data indicate that CpxA responds specifically to different lipid compositions.
Asunto(s)
Proteínas Bacterianas/química , Proteínas de Escherichia coli/química , Membrana Dobles de Lípidos/química , Modelos Moleculares , Fosfatidiletanolaminas/química , Proteínas Quinasas/química , Procesamiento Proteico-Postraduccional , Transducción de Señal , Acholeplasma laidlawii/enzimología , Acholeplasma laidlawii/metabolismo , Arabidopsis/enzimología , Arabidopsis/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Cardiolipinas/química , Cardiolipinas/metabolismo , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Genes Reporteros , Glicosiltransferasas/genética , Glicosiltransferasas/metabolismo , Proteínas Fluorescentes Verdes/genética , Proteínas Fluorescentes Verdes/metabolismo , Membrana Dobles de Lípidos/metabolismo , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Fosfatidiletanolaminas/metabolismo , Fosfatidilgliceroles/química , Fosfatidilgliceroles/metabolismo , Fosforilación , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Proteínas Quinasas/metabolismo , Proteínas Recombinantes de Fusión/metabolismo , Propiedades de SuperficieRESUMEN
Intracellular vesicles are abundant in eukaryotic cells but absent in the Gram-negative bacterium Escherichia coli. However, strong overexpression of a monotopic glycolipid-synthesizing enzyme, monoglucosyldiacylglycerol synthase from Acholeplasma laidlawii (alMGS), leads to massive formation of vesicles in the cytoplasm of E. coli. More importantly, alMGS provides a model system for the regulation of membrane properties by membrane-bound enzymes, which is critical for maintaining cellular integrity. Both phenomena depend on how alMGS binds to cell membranes, which is not well understood. Here, we carry out a comprehensive investigation of the membrane binding of alMGS by combining bioinformatics methods with extensive biochemical studies, structural modeling and molecular dynamics simulations. We find that alMGS binds to the membrane in a fairly upright manner, mainly by residues in the N-terminal domain, and in a way that induces local enrichment of anionic lipids and a local curvature deformation. Furthermore, several alMGS variants resulting from substitution of residues in the membrane anchoring segment are still able to generate vesicles, regardless of enzymatic activity. These results clarify earlier theories about the driving forces for vesicle formation, and shed new light on the membrane binding properties and enzymatic mechanism of alMGS and related monotopic GT-B fold glycosyltransferases.
Asunto(s)
Proteínas Bacterianas/fisiología , Vesículas Citoplasmáticas/enzimología , Glicosiltransferasas/fisiología , Acholeplasma laidlawii/enzimología , Secuencia de Aminoácidos , Sustitución de Aminoácidos , Proteínas Bacterianas/química , Sitios de Unión , Membrana Celular/enzimología , Escherichia coli/enzimología , Escherichia coli/ultraestructura , Glicosiltransferasas/química , Membrana Dobles de Lípidos/química , Simulación de Dinámica Molecular , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Unión Proteica , Estructura Secundaria de Proteína , Estructura Terciaria de ProteínaRESUMEN
The membrane protein monoglucosyldiacylglycerol synthase (MGS) from Acholeplasma laidlawii is responsible for the creation of intracellular membranes when overexpressed in Escherichia coli (E. coli). The present study investigates time dependent changes in composition and properties of E. coli membranes during 22h of MGS induction. The lipid/protein ratio increased by 38% in MGS-expressing cells compared to control cells. Time-dependent screening of lipids during this period indicated differences in fatty acid modeling. (1) Unsaturation levels remained constant for MGS cells (~62%) but significantly decreased in control cells (from 61% to 36%). (2) Cyclopropanated fatty acid content was lower in MGS producing cells while control cells had an increased cyclopropanation activity. Among all lipids, phosphatidylethanolamine (PE) was detected to be the most affected species in terms of cyclopropanation. Higher levels of unsaturation, lowered cyclopropanation levels and decreased transcription of the gene for cyclopropane fatty acid synthase (CFA) all indicate the tendency of the MGS protein to force E. coli membranes to alter its usual fatty acid composition.
Asunto(s)
Escherichia coli/metabolismo , Ácidos Grasos/metabolismo , Glucosiltransferasas/metabolismo , Acholeplasma laidlawii/enzimología , Acholeplasma laidlawii/genética , Acholeplasma laidlawii/metabolismo , Membrana Celular/enzimología , Membrana Celular/metabolismo , Escherichia coli/enzimología , Escherichia coli/genética , Lípidos de la Membrana/metabolismo , Proteínas de la Membrana/metabolismo , Metiltransferasas/metabolismo , Modelos Moleculares , Fosfatidiletanolaminas/metabolismo , Estructura Secundaria de ProteínaRESUMEN
Certain membrane proteins involved in lipid synthesis can induce formation of new intracellular membranes in Escherichia coli, i.e., intracellular vesicles. Among those, the foreign monotopic glycosyltransferase MGS from Acholeplasma laidlawii triggers such massive lipid synthesis when overexpressed. To examine the mechanism behind the increased lipid synthesis, we investigated the lipid binding properties of MGS in vivo together with the correlation between lipid synthesis and MGS overexpression levels. A good correlation between produced lipid quantities and overexpressed MGS protein was observed when standard LB medium was supplemented with four different lipid precursors that have significant roles in the lipid biosynthesis pathway. Interestingly, this correlation was highest concerning anionic lipid production and at the same time dependent on the selective binding of anionic lipid molecules by MGS. A selective interaction with anionic lipids was also observed in vitro by (31)P NMR binding studies using bicelles prepared with E. coli lipids. The results clearly demonstrate that the discriminative withdrawal of anionic lipids, especially phosphatidylglycerol, from the membrane through MGS binding triggers an in vivo signal for cells to create a "feed-forward" stimulation of lipid synthesis in E. coli. By this mechanism, cells can produce more membrane surface in order to accommodate excessively produced MGS molecules, which results in an interdependent cycle of lipid and MGS protein synthesis.
Asunto(s)
Acholeplasma laidlawii/enzimología , Proteínas Bacterianas/metabolismo , Escherichia coli/metabolismo , Glucosiltransferasas/metabolismo , Lípidos de la Membrana/metabolismo , Fosfolípidos/biosíntesis , Acetatos/metabolismo , Acholeplasma laidlawii/genética , Aniones/química , Aniones/metabolismo , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Unión Competitiva , Electroforesis en Gel de Poliacrilamida , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Glucosiltransferasas/química , Glucosiltransferasas/genética , Membrana Dobles de Lípidos/química , Membrana Dobles de Lípidos/metabolismo , Espectroscopía de Resonancia Magnética , Lípidos de la Membrana/química , Modelos Moleculares , Análisis Multivariante , Mutación , Fosfolípidos/química , Unión Proteica , Estructura Terciaria de Proteína , Espectroscopía Infrarroja por Transformada de Fourier , Transformación GenéticaRESUMEN
We identified a glycoside hydrolase family 94 homolog (ACL0729) from Acholeplasma laidlawii PG-8A as a laminaribiose (1,3-ß-D-glucobiose) phosphorylase (EC 2.4.1.31). The recombinant ACL0729 produced in Escherichia coli catalyzed phosphorolysis of laminaribiose with inversion of the anomeric configuration in a typical sequential bi bi mechanism releasing α-D-glucose 1-phosphate and D-glucose. Laminaritriose (1,3-ß-D-glucotriose) was not an efficient substrate for ACL0729. The phosphorolysis is reversible, enabling synthesis of 1,3-ß-D-glucosyl disaccharides by reverse phosphorolysis with strict regioselectivity from α-D-glucose 1-phosphate as the donor and suitable monosaccharide acceptors (D-glucose, 2-deoxy-D-arabino-hexopyranose, D-xylose, D-glucuronic acid, 1,5-anhydro-D-glucitol, and D-mannose) with C-3 and C-4 equatorial hydroxyl groups. The D-glucose and 2-deoxy-D-arabino-hexopyranose caused significantly strong competitive substrate inhibition compared with other glucobiose phosphorylases reported, in which the acceptor competitively inhibited the binding of the donor substrate. By contrast, none of the examined disaccharides served as acceptor in the synthetic reaction.
Asunto(s)
Acholeplasma laidlawii/enzimología , Disacáridos/biosíntesis , Glucosiltransferasas/metabolismo , Clonación Molecular , Disacáridos/química , Activación Enzimática , Glucosiltransferasas/química , Glucosiltransferasas/genética , Concentración de Iones de Hidrógeno , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , TemperaturaRESUMEN
Membrane proteins are essential to many cellular processes. However, the systematic study of membrane protein structure has been hindered by the difficulty in obtaining large quantities of these proteins. Protein overexpression using Escherichia coli is commonly used to produce large quantities of protein, but usually yields very little membrane protein. Furthermore, optimization of the expressing conditions, as well as the choice of detergent and other buffer components, is thought to be crucial for increasing the yield of stable and homogeneous protein. Herein we report high-yield expression and purification of a membrane-associated monotopic protein, the glycosyltransferase monoglucosyldiacylglycerol synthase (alMGS), in E. coli. Systematic optimization of protein expression was achieved through controlling a few basic expression parameters, including temperature and growth media, and the purifications were monitored using a fast and efficient size-exclusion chromatography (SEC) screening method. The latter method was shown to be a powerful tool for fast screening and for finding the optimal protein-stabilizing conditions. For alMGS it was found that the concentration of detergent was just as important as the type of detergent, and a low concentration of n-dodecyl-beta-D-maltoside (DDM) (approximately 1x critical micelle concentration) was the best for keeping the protein stable and homogeneous. By using these simply methods to optimize the conditions for alMGS expression and purification, the final expression level increase by two orders of magnitude, reaching 170 mg of pure protein per litre culture.
Asunto(s)
Proteínas Bacterianas/aislamiento & purificación , Glicosiltransferasas/aislamiento & purificación , Proteínas de la Membrana/aislamiento & purificación , Proteínas Recombinantes/aislamiento & purificación , Acholeplasma laidlawii/enzimología , Acholeplasma laidlawii/genética , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Membrana Celular/química , Cromatografía en Gel , Escherichia coli/genética , Glicosiltransferasas/genética , Glicosiltransferasas/metabolismo , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , SolubilidadRESUMEN
Serological properties of fructosobisphosphatases (FBPases) of Bacillus subtilis 668 and PGD agent of cereals--the mollicute Acholplasma laidlawii var. granulum st. 118 (Alg 118) were studied in a comparative aspect with the help of the reaction of double diffusion in gel according to Ouchterlony. It was established for each of microorganisms that their extracellular and intracellular enzymes are similar in serologic respect, and each of them is composed of two antigens, one of them being identical in the both microorganisms, while the other displays only partial identity, since it reacts with antibodies in heterological systems with formation of a precipitation line looking as a "spur". That indicates to the fact that antisera to those enzymes contain antibodies both to general determinants of antigens which are compared (FBPases here), and to the determinant absent in one of them. Basing on the investigation results it is concluded that FBPase of B. subtilis is rather similar than identical, in serological aspect, to the enzyme Alg 118 of the same name.
Asunto(s)
Acholeplasma laidlawii , Bacillus subtilis/enzimología , Grano Comestible/microbiología , Fructosa-Bifosfatasa/química , Enfermedades de las Plantas/microbiología , Acholeplasma laidlawii/enzimología , Acholeplasma laidlawii/inmunología , Acholeplasma laidlawii/patogenicidad , Anticuerpos Antibacterianos/análisis , Antígenos Bacterianos/análisis , Bacillus subtilis/inmunología , Bacillus subtilis/aislamiento & purificación , Electroforesis en Gel de Poliacrilamida , InmunodifusiónRESUMEN
In the prokaryote Acholeplasma laidlawii, membrane bilayer properties are sensed and regulated by two interface glycosyltransferases (GTs), synthesizing major nonbilayer- (alMGS GT) and bilayer-prone glucolipids. These enzymes are of similar structure, as many soluble GTs, but are sensitive to lipid charge and curvature stress properties. Multivariate and bioinformatic sequence analyses show that such interface enzymes, in relation to soluble ones of similar fold, are characterized by high cationic charge, certain distances between small and cationic amino acids, and by amphipathic helices. Varying surface contents of Lys/Arg pairs and Trp indicate different membrane-binding subclasses. A predicted potential (cationic) binding helix from alMGS was structurally verified by solution NMR and CD. The helix conformation was induced by a zwitterionic as well as anionic lipid environment, and the peptide was confined to the bilayer interface. Bilayer affinity of the peptide, analyzed by surface plasmon resonance, was higher than that for soluble membrane-seeking proteins/peptides and rose with anionic lipid content. Interface intercalation was supported by phase equilibria in membrane lipid mixtures, analyzed by 31P NMR and DSC. An analogous, potentially binding helix has a similar location in the structurally determined Escherichia coli cell wall precursor GT MurG. These two helices have little sequence conservation in alMGS and MurG homologues but maintain their amphipathic character. The evolutionary modification of the alMGS binding helix and its location close to the acceptor substrate site imply a functional importance in enzyme catalysis, potentially providing a mechanism by which glycolipid synthesis will be sensitive to membrane surface charge and intrinsic curvature strain.
Asunto(s)
Glucosiltransferasas/química , Membrana Dobles de Lípidos/química , Acholeplasma laidlawii/enzimología , Secuencia de Aminoácidos , Rastreo Diferencial de Calorimetría , Dicroismo Circular , Glucosiltransferasas/metabolismo , Modelos Moleculares , Datos de Secuencia Molecular , Resonancia Magnética Nuclear Biomolecular , Alineación de Secuencia , Resonancia por Plasmón de SuperficieRESUMEN
The reactions of glycolysis or gluconeogenesis proceed in good coordination in the cells of microorganisms, and each stage of these processes is distinctly regulated. Under such conditions fructose-bisphosphatase (FBPase) activity (the enzyme level being constant in the cells of microorganisms) is inhibited by adenosine-5'-monophosphate (AMP) and is activated by phosphoenolpyruvate (PEP) depending on the kind of the source of carbon (glycolytic or glyconeogenic) used for microorganism growth. It is evident that the corresponding regulation of FBPase should be absent in the extracellular environment where one cannot observe a distinct coordination of functioning of the enzyme systems. The investigation results prove that both AMP and PEP, under their individual testing in concentrations up to 20 microM did not practically affect activity of extracellular FBPase, and at higher concentrations they sharply decreased its activity (200 microM AMP by 70%, and PEP - by 75%). Under joint use of PEP and AMP (in concentration 200 microM and 500 microM) one could observe mutual neutralization of the effect of these substances on FBPase; as a result, its activity decreased only by 15% under AMP concentration of 500 microM, and by 25% at AMP concentration of 200 microM, that is in complete agreement with the data of individual testing of the above substances. PEP in high concentrations has displayed itself as a more active repressor of FBPase activity than AMP. AgNO3 in concentrations to 20 microM has manifested itself as a moderate stimulator of FBPase activity and even in the concentration of 200 microM it decreased the enzyme activity by 50% only. The data obtained are rather different than those described in literature for cellular FBPases of microorganisms. It is known that AMP is a powerful inhibitor of its FBPases activity (Ki = 5 microM) while PEP activates it (Ka = 20 microM).
Asunto(s)
Acholeplasma laidlawii/enzimología , Adenosina Monofosfato/farmacología , Espacio Extracelular/enzimología , Fructosa-Bifosfatasa/metabolismo , Fosfoenolpiruvato/farmacología , Nitrato de Plata/farmacología , Acholeplasma laidlawii/efectos de los fármacos , Acholeplasma laidlawii/metabolismo , Interacciones Farmacológicas , Espacio Extracelular/efectos de los fármacos , Espacio Extracelular/metabolismo , Gluconeogénesis/efectos de los fármacos , Glucólisis/efectos de los fármacosRESUMEN
The influence of 16 substances-effectors on the extracellular mollicute fructosobisphosphatase (FBPhase) was studied for the first time. These effectors are used, as a rule, when studying properties of this enzyme biopreparations newly isolated from the cells of animals, plants and cells of microorganisms. It was established that optimum pH for FBPhase of mollicutes is whithin 7.3-7.5 and on the basis of this index it is attributed to the group of the "neutral" of these enzymes. Cations of K, Mn, Mg, NH4, Tl and phosphoenolpyruvate (PEP) increase its activity. Cations of Li and adenosin 5'-monophosphate (AMP) proved to be the inhibitors of mollicute FBPhase activity. Chelators (EDTA, citrate, imidasol pyruvate, L-histidine) activated it inconsiderably (by 10-20%). Cations of Zn, in contrast to those of other tested metals, in low concentrations (0.1 - 0.2 microM) inhibited FBPhase activity, but when increasing their concentration (6 microM and above) activated the enzyme even better than it was observed for Mn and Mg cations, the necessary components of the reacting mixtures. Thus, when determining the components of the reacting mixtures with the purpose to study the properties of mollicute FBPhase and to regulate its activity in the in vitro systems under pH values optimal for the enzyme, the monovalent (NH4, K, Tl) and bivalent (Mg, Mn, Zn) cations may be introduced in their compositions as activators, AMP and Li cations should be used as inhibitors. Other substances which were studied when making their work proved to be inessential effectors is respect of mollicute FBPhase.
Asunto(s)
Acholeplasma laidlawii/enzimología , Cationes Bivalentes/farmacología , Cationes Monovalentes/farmacología , Quelantes/farmacología , Fructosa-Bifosfatasa/metabolismo , Zinc/farmacología , Acholeplasma laidlawii/genética , Adenosina Monofosfato/farmacología , Concentración de Iones de Hidrógeno , Fosfoenolpiruvato Carboxilasa/metabolismo , Tenericutes/enzimologíaRESUMEN
Molecular weight of extracellular fructosobisphosphatase of Acholeplasma laidlawii var. granulum strain 118--an agent of pale-green dwarf of cereals has been determined. This enzyme is the basic factor of pathogenicity of this organism, and, maybe, of all phytoplasmas, owing to realization of the enzyme noncontrolled function in the plant organism, its habit acquires the disease symptoms characteristic of "yellows". It has been established that in the native condition the extracellular fructosobisphosphatase of Acholeplasma laidlawii var. granulum st. 118 has molecular weight 230 000 +/- 5 000 Da, and in denaturating ones--56 600 Da, i.e., the enzyme in the native condition consists of four equal subunits. The subunit composition is peculiar to fructosobisphosphatase of other microorganisms already described in literature; fructosobisphosphatase of the mollicute as to its parameters both in native and denaturated conditions occupies the intermediate place among them.
Asunto(s)
Acholeplasma laidlawii/enzimología , Espacio Extracelular/enzimología , Fructosa-Bifosfatasa/química , Subunidades de Proteína/química , Factores de Virulencia/química , Acholeplasma laidlawii/citología , Electroforesis en Gel de Poliacrilamida , Fructosa-Bifosfatasa/metabolismo , Peso Molecular , Subunidades de Proteína/metabolismo , Factores de Virulencia/metabolismoRESUMEN
1,2-Diacylglycerol 3-glucosyltransferase is associated with the membrane surface catalyzing the synthesis of the major nonbilayer-prone lipid alpha-monoglucosyl diacylglycerol (MGlcDAG) from 1,2-DAG in the cell wall-less Acholeplasma laidlawii. Phosphatidylglycerol (PG), but not neutral or zwitterionic lipids, seems to be essential for an active conformation and function of the enzyme. Surface plasmon resonance analysis was employed to study association of the enzyme with lipid bilayers. Binding kinetics could be well fitted only to a two-state model, implying also a (second) conformational step. The enzyme bound less efficiently to liposomes containing only zwitterionic lipids, whereas increasing molar fractions of the anionic PG or cardiolipin (CL) strongly promoted binding by improved association (k(a1)), and especially a decreased rate of return (k(d2)) from the second state. This yielded a very low overall dissociation constant (K(D)), corresponding to an essentially irreversible membrane association. Both liposome binding and consecutive activity of the enzyme correlated with the PG concentration. The importance of the electrostatic interactions with anionic lipids was shown by quenching of both binding and activity with increasing NaCl concentrations, and corroborated in vivo for an active enzyme-green fluorescent protein hybrid in Escherichia coli. Nonbilayer-prone lipids substantially enhanced enzyme-liposome binding by promoting a changed conformation (decreasing k(d2)), similar to the anionic lipids, indicating the importance of hydrophobic interactions and a curvature packing stress. For CL and the nonbilayer lipids, effects on enzyme binding and consecutive activity were not correlated, suggesting a separate lipid control of activity. Similar features were recorded with polylysine (cationic) and polyglutamate (anionic) peptides present, but here probably dependent on the selective charge interactions with the enzyme N- and C-domains, respectively. A lipid-dependent conformational change and PG association of the enzyme were verified by circular dichroism, intrinsic tryptophan, and pyrene-probe fluorescence analyses, respectively. It is concluded that an electrostatic association of the enzyme with the membrane surface is accompanied by hydrophobic interactions and a conformational change. However, specific lipids, the curvature packing stress, and proteins or small molecules bound to the enzyme can modulate the activity of the bound A. laidlawii MGlcDAG synthase.
Asunto(s)
Acholeplasma laidlawii/enzimología , Glucosiltransferasas/metabolismo , Membrana Dobles de Lípidos/metabolismo , Animales , Aniones , Dicroismo Circular , Cisteína/química , Cisteína/metabolismo , Glucosiltransferasas/química , Proteínas Fluorescentes Verdes , Cinética , Membrana Dobles de Lípidos/química , Liposomas/química , Proteínas Luminiscentes/química , Proteínas Luminiscentes/metabolismo , Meliteno/química , Meliteno/metabolismo , Microscopía Fluorescente , Modelos Moleculares , Fosfatidilgliceroles/química , Fosfatidilgliceroles/metabolismo , Unión Proteica , Pirenos/química , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Espectrometría de Fluorescencia , Resonancia por Plasmón de Superficie , Propiedades de SuperficieRESUMEN
Part of the gyrase A gene (gyrA) of Acholeplasma laidlawii was cloned and incorporated directly downstream from a 6 x His tag segment of the pQE expression vector. The 23-kDa fusion protein was expressed as a 6 x His-tagged protein in Escherichia coli. The fusion protein was purified and used as an antigen for rabbit immunization. Western immunoblot analysis revealed that the antiserum raised against the gyrase A fragment had a specific affinity for a 108-kDa protein of A. laidlawii and cross-reacted with a 107.5-kDa protein of Acholeplasma axanthum, a 107-kDa protein of Acholeplasma granularum, and 95-97-kDa proteins of several phytoplasma-infected plants. The antiserum could also detect phytoplasmas in infected plant sap. These results demonstrate that the gyrase A protein (GyrA) of A. laidlawii shares antigenicity with the GyrA of other Acholeplasma species and also with those of phytoplasmas including some from a few groups with unrelated 16S rRNAs.
Asunto(s)
Acholeplasma laidlawii/enzimología , Acholeplasma/enzimología , Anticuerpos Antibacterianos/inmunología , Girasa de ADN/inmunología , Enfermedades de las Plantas/microbiología , Acholeplasma/inmunología , Acholeplasma laidlawii/inmunología , Secuencia de Aminoácidos , Especificidad de Anticuerpos , Proteínas Bacterianas/inmunología , Secuencia de Bases , Clonación Molecular , Reacciones Cruzadas , Girasa de ADN/genética , Magnoliopsida/microbiología , Datos de Secuencia Molecular , Reacción en Cadena de la Polimerasa , Proteínas Recombinantes/inmunología , Homología de Secuencia de Ácido Nucleico , Especificidad de la EspecieRESUMEN
Synthesis of the nonbilayer-prone alpha-monoglucosyldiacylglycerol (MGlcDAG) is crucial for bilayer packing properties and the lipid surface charge density in the membrane of Acholeplasma laidlawii. The gene for the responsible, membrane-bound glucosyltransferase (alMGS) (EC ) was sequenced and functionally cloned in Escherichia coli, yielding MGlcDAG in the recombinants. Similar amino acid sequences were encoded in the genomes of several Gram-positive bacteria (especially pathogens), thermophiles, archaea, and a few eukaryotes. All of these contained the typical EX(7)E catalytic motif of the CAZy family 4 of alpha-glycosyltransferases. The synthesis of MGlcDAG by a close sequence analog from Streptococcus pneumoniae (spMGS) was verified by polymerase chain reaction cloning, corroborating a connection between sequence and functional similarity for these proteins. However, alMGS and spMGS varied in dependence on anionic phospholipid activators phosphatidylglycerol and cardiolipin, suggesting certain regulatory differences. Fold predictions strongly indicated a similarity for alMGS (and spMGS) with the two-domain structure of the E. coli MurG cell envelope glycosyltransferase and several amphipathic membrane-binding segments in various proteins. On the basis of this structure, the alMGS sequence charge distribution, and anionic phospholipid dependence, a model for the bilayer surface binding and activity is proposed for this regulatory enzyme.
Asunto(s)
Acholeplasma laidlawii/enzimología , Glucosiltransferasas/metabolismo , Secuencia de Aminoácidos , Secuencia de Bases , Membrana Celular/enzimología , Clonación Molecular , Cartilla de ADN , ADN Complementario , Glucosiltransferasas/química , Glucosiltransferasas/genética , Datos de Secuencia Molecular , Homología de Secuencia de AminoácidoRESUMEN
Nucleotide sequence of Acholeplasma laidlawii genome site PG-8B (1000 n.p.), containing topoisomerase IV subunit genes (parE and parC), has been determined. Sequenced genome site contains a gene fragment coding for the C-terminal region of ParE and gene fragment coding for N-terminal region of ParC. Topoisomerase IV subunite genes in A. laidlawii genome are situated near each other and overlapping by 4 nucleotides. Selection in liquid nutrient medium with ascending antibiotic concentrations resulted in derivation of A. laidlawii PG-8B cells resistant to ciprofloxacin, a fluoroquinolone. The resistant clones contain a mutation in the parC QRDR region determining fluoroquinolone resistance: Ser(91) (corresponding to Ser(80) in Escherichia coli ParC) replacement) for Leu.
Asunto(s)
Acholeplasma laidlawii/enzimología , Antiinfecciosos/farmacología , ADN-Topoisomerasas de Tipo II/genética , Mutación , Secuencia de Aminoácidos , Secuencia de Bases , Cartilla de ADN , Topoisomerasa de ADN IV , ADN-Topoisomerasas de Tipo II/química , Farmacorresistencia Microbiana/genética , Fluoroquinolonas , Datos de Secuencia Molecular , Homología de Secuencia de AminoácidoAsunto(s)
Acholeplasma laidlawii/genética , ADN-Topoisomerasas de Tipo II/genética , Transportadoras de Casetes de Unión a ATP/genética , Transportadoras de Casetes de Unión a ATP/metabolismo , Acholeplasma laidlawii/enzimología , Adenosina Trifosfato/metabolismo , Secuencia de Aminoácidos , Secuencia de Bases , Southern Blotting , Cartilla de ADN , Genoma Bacteriano , Datos de Secuencia Molecular , Mutación , Sistemas de Lectura Abierta , Reacción en Cadena de la Polimerasa , Homología de Secuencia de AminoácidoRESUMEN
In membranes of Acholeplasma laidlawii a single glucosyltransferase step between the major, nonbilayer-prone monoglucosyl-diacylglycerol (MGlcDAG) and the bilayer-forming diglucosyl-diacylglycerol (DGlcDAG) is important for maintenance of lipid phase equilibria and curvature packing stress. This DGlcDAG synthase is activated in a cooperative fashion by phosphatidylglycerol (PG), but in vivo PG amounts are not enough for efficient DGlcDAG synthesis. In vitro, phospholipids with an sn-glycero-3-phosphate backbone, and no positive head group charge, functioned as activators. Different metabolic, soluble phosphates could supplement PG for activation, depending on type, amount, and valency. Especially efficient were the glycolytic intermediates fructose 1,6-bisphosphate and ATP, active at cellular concentrations on the DGlcDAG but not on the preceding MGlcDAG synthase. Potencies of different phosphatidylinositol (foreign lipid) derivatives differed with numbers and positions of their phosphate moieties. A selective stimulation of the DGlcDAG, but not the MGlcDAG synthase, by minor amounts of double-stranded DNA was additive to the best phospholipid activators. These results support two types of activator sites on the enzyme: (i) lipid-phosphate ones close to the membrane interphase, and (ii) soluble (or particulate)-phosphate ones further out from the surface. Thereby, the nonbilayer (MGlcDAG) to bilayer (DGlcDAG) lipid balance may be integrated with the metabolic status of the cell and potentially also to membrane and cell division.
Asunto(s)
Acholeplasma laidlawii/enzimología , ADN/metabolismo , Glucosiltransferasas/metabolismo , Membrana Dobles de Lípidos , Lípidos de la Membrana/metabolismo , Fosfatos/metabolismo , Fosfolípidos/metabolismo , Activación Enzimática , Glucosiltransferasas/química , Magnesio/metabolismo , Conformación ProteicaRESUMEN
In the single membrane of Acholeplasma laidlawii, a specific glucosyltransferase (DGlcDAG synthase) synthesizes the major, bilayer-forming lipid diglucosyldiacylglycerol (DGlcDAG) from the preceding major, nonbilayer-prone monoglucosyldiacylglycerol (MGlcDAG). This is crucial for the maintenance of phase equilibria close to a potential bilayer-nonbilayer transition and a nearly constant spontaneous curvature for the membrane bilayer lipid mixture. The glucolipid pathway is also balanced against the phosphatidylglycerol (PG) pathway to maintain a certain lipid surface charge density. The DGlcDAG synthase was purified approximately 5000-fold by three chromatographic techniques and identified as a minor 40 kDa membrane protein. In CHAPS mixed micelles, a cooperative dependence on anionic lipid activators was confirmed, with PG as the best. The dependence of the enzyme on the soluble UDP-glucose substrate followed Michaelis-Menten kinetics, while the kinetics for the other (lipid) substrate MGlcDAG exhibited cooperativity, with Hill coefficients in the range of 3-5. Vmax and the Hill coefficient, but not Km, for the MGlcDAG substrate were increased by increased PG concentrations, but above 3 mol % MGlcDAG, the rate of synthesis was constant. Hence, the DGlcDAG synthase is more affected by the lipid activator than by the lipid substrate at physiological lipid concentrations. The enzyme was shown to be sensitive to curvature "stress" changes, i.e., was stimulated by various nonbilayer lipids but inhibited by certain others. Certain phosphates were also stimulatory. With the two purified MGlcDAG and DGlcDAG synthases reconstituted together in the presence of a potent nonbilayer lipid, the strong responses in the amounts of MGlcDAG and DGlcDAG synthesized mimicked the responses in vivo. This supports the important regulatory functions of these enzymes.