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1.
Gene ; 930: 148860, 2024 Dec 20.
Artículo en Inglés | MEDLINE | ID: mdl-39151675

RESUMEN

Since ectoine is a high-value product, overviewing strategies for identifying novel microbial sources becomes relevant. In the current study, by following a genome mining approach, the ectoine biosynthetic cluster in a tropical marine strain of Nocardiopsis dassonvillei (NCIM 5124) was located and compared with related organisms. Transcriptome analysis of Control and Test samples (with 0 and 5% NaCl, respectively) was carried out to understand salt induced stress response at the molecular level. There were 4950 differentially expressed genes with 25 transcripts being significantly upregulated in Test samples. NaCl induced upregulation of the ectoine biosynthesis cluster and some other genes (stress response, chaperone/Clp protease, cytoplasm, ribonucleoprotein and protein biosynthesis). The production of ectoine as a stress response molecule was experimentally validated via LCMS analysis. The investigation sheds light on the responses exhibited by this actinomycete in coping up with salt stress and provides a foundation for understanding salt induced molecular interactions.


Asunto(s)
Aminoácidos Diaminos , Transcriptoma , Aminoácidos Diaminos/metabolismo , Aminoácidos Diaminos/biosíntesis , Actinobacteria/genética , Actinobacteria/metabolismo , Perfilación de la Expresión Génica/métodos , Genómica/métodos , Genoma Bacteriano , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Familia de Multigenes , Estrés Salino/genética , Cloruro de Sodio/farmacología
2.
Microb Cell Fact ; 23(1): 237, 2024 Aug 31.
Artículo en Inglés | MEDLINE | ID: mdl-39217338

RESUMEN

BACKGROUND: Ectoine as an amino acid derivative is widely applied in many fields, such as the food industry, cosmetic manufacturing, biologics, and therapeutic agent. Large-scale production of ectoine is mainly restricted by the cost of fermentation substrates (e.g., carbon sources) and sterilization. RESULTS: In this study, Halomonas cupida J9 was shown to be capable of synthesizing ectoine using xylose as the sole carbon source. A pathway was proposed in H. cupida J9 that synergistically utilizes both WBG xylose metabolism and EMP glucose metabolism for the synthesis of ectoine. Transcriptome analysis indicated that expression of ectoine biosynthesis module was enhanced under salt stress. Ectoine production by H. cupida J9 was enhanced by improving the expression of ectoine biosynthesis module, increasing the intracellular supply of the precursor oxaloacetate, and utilizing urea as the nitrogen source. The constructed J9U-P8EC achieved a record ectoine production of 4.12 g/L after 60 h of xylose fermentation. Finally, unsterile production of ectoine by J9U-P8EC from either a glucose-xylose mixture or corn straw hydrolysate was demonstrated, with an output of 8.55 g/L and 1.30 g/L of ectoine, respectively. CONCLUSIONS: This study created a promising H. cupida J9-based cell factory for low-cost production of ectoine. Our results highlight the potential of J9U-P8EC to utilize lignocellulose-rich agriculture waste for open production of ectoine.


Asunto(s)
Aminoácidos Diaminos , Biomasa , Fermentación , Halomonas , Lignina , Xilosa , Aminoácidos Diaminos/metabolismo , Aminoácidos Diaminos/biosíntesis , Lignina/metabolismo , Xilosa/metabolismo , Halomonas/metabolismo , Halomonas/genética , Tolerancia a la Sal , Glucosa/metabolismo
3.
Sci Rep ; 14(1): 15704, 2024 07 08.
Artículo en Inglés | MEDLINE | ID: mdl-38977706

RESUMEN

Halophiles are one of the classes of extremophilic microorganisms that can flourish in environments with very high salt concentrations. In this study, fifteen bacterial strains isolated from various crop rhizospheric soils of agricultural fields along the Southwest coastline of Saurashtra, Gujarat, and identified by 16S rRNA gene sequencing as Halomonas pacifica, H. stenophila, H. salifodinae, H. binhaiensis, Oceanobacillus oncorhynchi, and Bacillus paralicheniformis were investigated for their potentiality to produce extremozymes and compatible solute. The isolates showed the production of halophilic protease, cellulase, and chitinase enzymes ranging from 6.90 to 35.38, 0.004-0.042, and 0.097-0.550 U ml-1, respectively. The production of ectoine-compatible solute ranged from 0.01 to 3.17 mg l-1. Furthermore, the investigation of the ectoine-compatible solute production at the molecular level by PCR showed the presence of the ectoine synthase gene responsible for its biosynthesis in the isolates. Besides, it also showed the presence of glycine betaine biosynthetic gene betaine aldehyde dehydrogenase in the isolates. The compatible solute production by these isolates may be linked to their ability to produce extremozymes under saline conditions, which could protect them from salt-induced denaturation, potentially enhancing their stability and activity. This correlation warrants further investigation.


Asunto(s)
ARN Ribosómico 16S , Rizosfera , Microbiología del Suelo , ARN Ribosómico 16S/genética , Aminoácidos Diaminos/biosíntesis , Aminoácidos Diaminos/metabolismo , India , Productos Agrícolas/microbiología , Celulasa/metabolismo , Celulasa/genética , Celulasa/biosíntesis , Quitinasas/metabolismo , Quitinasas/genética , Tolerancia a la Sal/genética , Filogenia , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Péptido Hidrolasas/metabolismo , Péptido Hidrolasas/genética , Bacterias/genética , Bacterias/metabolismo , Bacterias/aislamiento & purificación , Bacterias/clasificación , Bacillus/genética , Bacillus/metabolismo , Bacillus/aislamiento & purificación
4.
Int J Biol Macromol ; 275(Pt 2): 133612, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-38960226

RESUMEN

Ectoine, so-called tetrahydropyrimidine, is an important osmotic adjustment solute and widely applied in cosmetics and protein protectant. Some attempts have been made to improve the ectoine productivity. However, the strains with both high ectoine production capacity and high glucose conversion were still absent so far. Aim to construct a strain for efficiently producing ectoine, ectoine synthetic gene cluster ectABC from Pseudomonas stutzeri was overexpressed in E. coli BL21 (DE3). The ection production was improved by 382 % (ectoine titer increased from 1.73 g/L to 8.33 g/L) after the rational design of rate-limiting enzyme L-2,4-diaminobutyrate transaminase EctBps (protein engineering) combined with the metabolic engineering that focused on the enrichment and conversion of precursors. The final strain YW20 was applied to overproduce ectoine in fed-batch fermentation and yield 68.9 g/L of ectoine with 0.88 g/L/h of space-time yield and the highest glucose conversion reported [34 % (g/g)]. From the fermentation broth, ectoine was purified with 99.7 % purity and 79.8 % yield. This study successfully provided an engineered strain as well as an efficient method for the industrial bio-synthesis and preparation of ectoine.


Asunto(s)
Aminoácidos Diaminos , Escherichia coli , Ingeniería Metabólica , Ingeniería de Proteínas , Transaminasas , Ingeniería Metabólica/métodos , Aminoácidos Diaminos/biosíntesis , Aminoácidos Diaminos/metabolismo , Aminoácidos Diaminos/genética , Transaminasas/genética , Transaminasas/metabolismo , Ingeniería de Proteínas/métodos , Escherichia coli/genética , Escherichia coli/metabolismo , Fermentación , Pseudomonas stutzeri/genética , Pseudomonas stutzeri/enzimología , Glucosa/metabolismo , Familia de Multigenes
5.
N Biotechnol ; 83: 56-65, 2024 Nov 25.
Artículo en Inglés | MEDLINE | ID: mdl-38945523

RESUMEN

Chinese hamster ovary (CHO) cells represent the most preferential host cell system for therapeutic monoclonal antibody (mAb) production. Enhancing mAb production in CHO cells can be achieved by adding chemical compounds that regulate the cell cycle and cell survival pathways. This study investigated the impact of ectoine supplementation on mAb production in CHO cells. The results showed that adding ectoine at a concentration of 100 mM on the 3rd day of cultivation improved mAb production by improving cell viability and extending the culture duration. RNA sequencing analysis revealed differentially expressed genes associated with cell cycle regulation, cell proliferation, and cellular homeostasis, in particular promotion of cell cycle arrest, which was then confirmed by flow cytometry analysis. Ectoine-treated CHO cells exhibited an increase in the number of cells in the G0/G1 phase. In addition, the cell diameter was also increased. These findings support the hypothesis that ectoine enhances mAb production in CHO cells through mechanisms involving cell cycle arrest and cellular homeostasis. Overall, this study highlights the potential of ectoine as a promising supplementation strategy to enhance mAb production not only in CHO cells but also in other cell lines.


Asunto(s)
Aminoácidos Diaminos , Anticuerpos Monoclonales , Puntos de Control del Ciclo Celular , Cricetulus , Proteínas Recombinantes , Animales , Células CHO , Anticuerpos Monoclonales/farmacología , Anticuerpos Monoclonales/biosíntesis , Puntos de Control del Ciclo Celular/efectos de los fármacos , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/farmacología , Aminoácidos Diaminos/farmacología , Aminoácidos Diaminos/biosíntesis , Supervivencia Celular/efectos de los fármacos , Cricetinae , Proliferación Celular/efectos de los fármacos
6.
Sheng Wu Gong Cheng Xue Bao ; 40(6): 1620-1643, 2024 Jun 25.
Artículo en Chino | MEDLINE | ID: mdl-38914483

RESUMEN

Compatible solutes are highly water-soluble organic osmolytes produced by microorganisms to adapt to extreme environments, such as high salinity and osmotic pressure. Among these, ectoine plays a crucial role in repairing and protecting nucleic acids, protein, biofilms, and cells. As a result, it has found widespread applications in cosmetics, biological agents, the enzyme industry, medicine, and other fields. Currently, the market value of ectoine is around US$ 1 000/kg, with a global demand reaching 15 000 tons per year. Although halophilic bacteria serve as the natural source of ectoine synthesis, its production in high-salinity media presents challenges such as equipment corrosion and high cost for industrial production. Advancements in functional genomics, systems biology, and synthetic biology have paved the way for the development of high-yielding cell factories through metabolic engineering, leading to significant progress. For example, engineered Escherichia coli achieved a maximum ectoine titer of 131.8 g/L, with a productivity of 1.37 g/(L·h). This review aims to explore the biosynthetic pathway, biochemical characteristics of key enzymes, and the biosynthesis of ectoine, shedding light on current research status and offering insights for industrial-scale ectoine production.


Asunto(s)
Aminoácidos Diaminos , Ingeniería Metabólica , Aminoácidos Diaminos/biosíntesis , Aminoácidos Diaminos/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Vías Biosintéticas , Hidroliasas
7.
Appl Microbiol Biotechnol ; 108(1): 353, 2024 May 31.
Artículo en Inglés | MEDLINE | ID: mdl-38819481

RESUMEN

Hydroxyectoine is an important compatible solute that holds potential for development into a high-value chemical with broad applications. However, the traditional high-salt fermentation for hydroxyectoine production presents challenges in treating the high-salt wastewater. Here, we report the rational engineering of Halomonas salifodinae to improve the bioproduction of hydroxyectoine under lower-salt conditions. The comparative transcriptomic analysis suggested that the increased expression of ectD gene encoding ectoine hydroxylase (EctD) and the decreased expressions of genes responsible for tricarboxylic acid (TCA) cycle contributed to the increased hydroxyectoine production in H. salifodinae IM328 grown under high-salt conditions. By blocking the degradation pathway of ectoine and hydroxyectoine, enhancing the expression of ectD, and increasing the supply of 2-oxoglutarate, the engineered H. salifodinae strain HS328-YNP15 (ΔdoeA::PUP119-ectD p-gdh) produced 8.3-fold higher hydroxyectoine production than the wild-type strain and finally achieved a hydroxyectoine titer of 4.9 g/L in fed-batch fermentation without any detailed process optimization. This study shows the potential to integrate hydroxyectoine production into open unsterile fermentation process that operates under low-salinity and high-alkalinity conditions, paving the way for next-generation industrial biotechnology. KEY POINTS: • Hydroxyectoine production in H. salifodinae correlates with the salinity of medium • Transcriptomic analysis reveals the limiting factors for hydroxyectoine production • The engineered strain produced 8.3-fold more hydroxyectoine than the wild type.


Asunto(s)
Aminoácidos Diaminos , Fermentación , Halomonas , Ingeniería Metabólica , Halomonas/genética , Halomonas/metabolismo , Ingeniería Metabólica/métodos , Aminoácidos Diaminos/biosíntesis , Aminoácidos Diaminos/metabolismo , Aminoácidos Diaminos/genética , Ciclo del Ácido Cítrico/genética , Perfilación de la Expresión Génica , Cloruro de Sodio/metabolismo , Salinidad , Oxigenasas de Función Mixta/genética , Oxigenasas de Función Mixta/metabolismo , Ácidos Cetoglutáricos/metabolismo
8.
Microb Cell Fact ; 23(1): 127, 2024 May 02.
Artículo en Inglés | MEDLINE | ID: mdl-38698430

RESUMEN

BACKGROUND: Methane is a greenhouse gas with a significant potential to contribute to global warming. The biological conversion of methane to ectoine using methanotrophs represents an environmentally and economically beneficial technology, combining the reduction of methane that would otherwise be combusted and released into the atmosphere with the production of value-added products. RESULTS: In this study, high ectoine production was achieved using genetically engineered Methylomicrobium alcaliphilum 20Z, a methanotrophic ectoine-producing bacterium, by knocking out doeA, which encodes a putative ectoine hydrolase, resulting in complete inhibition of ectoine degradation. Ectoine was confirmed to be degraded by doeA to N-α-acetyl-L-2,4-diaminobutyrate under nitrogen depletion conditions. Optimal copper and nitrogen concentrations enhanced biomass and ectoine production, respectively. Under optimal fed-batch fermentation conditions, ectoine production proportionate with biomass production was achieved, resulting in 1.0 g/L of ectoine with 16 g/L of biomass. Upon applying a hyperosmotic shock after high-cell-density culture, 1.5 g/L of ectoine was obtained without further cell growth from methane. CONCLUSIONS: This study suggests the optimization of a method for the high production of ectoine from methane by preventing ectoine degradation. To our knowledge, the final titer of ectoine obtained by M. alcaliphilum 20ZDP3 was the highest in the ectoine production from methane to date. This is the first study to propose ectoine production from methane applying high cell density culture by preventing ectoine degradation.


Asunto(s)
Aminoácidos Diaminos , Metano , Methylococcaceae , Aminoácidos Diaminos/metabolismo , Aminoácidos Diaminos/biosíntesis , Metano/metabolismo , Methylococcaceae/metabolismo , Methylococcaceae/genética , Fermentación , Biomasa , Ingeniería Genética , Proteínas Bacterianas/metabolismo , Proteínas Bacterianas/genética , Ingeniería Metabólica/métodos , Técnicas de Cultivo Celular por Lotes
9.
ACS Synth Biol ; 13(7): 2081-2090, 2024 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-38607270

RESUMEN

Ectoine is a compatible solute that functions as a cell protector from various stresses, protecting cells and stabilizing biomolecules, and is widely used in medicine, cosmetics, and biotechnology. Microbial fermentation has been widely used for the large-scale production of ectoine, and a number of fermentation strategies have been developed to increase the ectoine yield, reduce production costs, and simplify the production process. Here, Corynebacterium glutamicum was engineered for ectoine production by heterologous expression of the ectoine biosynthesis operon ectBAC gene from Halomonas elongata, and a series of genetic modifications were implemented. This included introducing the de3 gene from Escherichia coli BL21 (DE3) to express the T7 promoter, eliminating the lysine transporter protein lysE to limit lysine production, and performing a targeted mutation lysCS301Y on aspartate kinase to alleviate feedback inhibition of lysine. The new engineered strain Ect10 obtained an ectoine titer of 115.87 g/L in an optimized fed-batch fermentation, representing the highest ectoine production level in C. glutamicum and achieving the efficient production of ectoine in a low-salt environment.


Asunto(s)
Aminoácidos Diaminos , Corynebacterium glutamicum , Escherichia coli , Fermentación , Halomonas , Ingeniería Metabólica , Aminoácidos Diaminos/biosíntesis , Aminoácidos Diaminos/metabolismo , Aminoácidos Diaminos/genética , Corynebacterium glutamicum/genética , Corynebacterium glutamicum/metabolismo , Ingeniería Metabólica/métodos , Halomonas/genética , Halomonas/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Lisina/metabolismo , Lisina/biosíntesis , Regiones Promotoras Genéticas , Operón/genética , Aspartato Quinasa/genética , Aspartato Quinasa/metabolismo , Sistemas de Transporte de Aminoácidos Básicos
10.
Biomolecules ; 11(8)2021 08 16.
Artículo en Inglés | MEDLINE | ID: mdl-34439884

RESUMEN

Wastewater treatment plants and other remediation facilities serve important roles, both in public health, but also as dynamic research platforms for acquiring useful resources and biomolecules for various applications. An example of this is methanotrophic bacteria within anaerobic digestion processes in wastewater treatment plants. These bacteria are an important microbial source of many products including ectoine, polyhydroxyalkanoates, and methanobactins, which are invaluable to the fields of biotechnology and biomedicine. Here we provide an overview of the methanotrophs' unique metabolism and the biochemical pathways involved in biomolecule formation. We also discuss the potential biomedical applications of these biomolecules through creation of beneficial biocompatible products including vaccines, prosthetics, electronic devices, drug carriers, and heart stents. We highlight the links between molecular biology, public health, and environmental science in the advancement of biomedical research and industrial applications using methanotrophic bacteria in wastewater treatment systems.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Bacterias Gramnegativas/metabolismo , Metano/metabolismo , Polihidroxialcanoatos/biosíntesis , Purificación del Agua/métodos , Reactores Biológicos , Biotecnología
11.
Amino Acids ; 53(6): 801-812, 2021 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-33950299

RESUMEN

Plants catalyze the biosynthesis of a large number of non-protein amino acids, which are usually toxic for other organisms. In this review, the chemistry and metabolism of N-heterocyclic non-protein amino acids from plants are described. These N-heterocyclic non-protein amino acids are composed of ß-substituted alanines and include mimosine, ß-pyrazol-1-yl-L-alanine, willardiine, isowillardiine, and lathyrine. These ß-substituted alanines consisted of an N-heterocyclic moiety and an alanyl side chain. This review explains how these individual moieties are derived from their precursors and how they are used as the substrate for biosynthesizing the respective N-heterocyclic non-protein amino acids. In addition, known catabolism and possible role of these non-protein amino acids in the actual host is explained.


Asunto(s)
Alanina/análogos & derivados , Aminoácidos Diaminos/biosíntesis , Plantas/metabolismo , Uracilo/biosíntesis , Alanina/biosíntesis
12.
Microb Cell Fact ; 20(1): 76, 2021 Mar 26.
Artículo en Inglés | MEDLINE | ID: mdl-33771157

RESUMEN

Ectoine and hydroxyectoine as typical representatives of compatible solutes are not only essential for extremophiles to survive in extreme environments, but also widely used in cosmetic and medical industries. Ectoine was traditionally produced by Halomonas elongata through a "bacterial milking" process, of which the marked feature is using a high-salt medium to stimulate ectoine biosynthesis and then excreting ectoine into a low-salt medium by osmotic shock. The optimal hydroxyectoine production was achieved by optimizing the fermentation process of Halomonas salina. However, high-salinity broth exacerbates the corrosion to fermenters, and more importantly, brings a big challenge to the subsequent wastewater treatment. Therefore, increasing attention has been paid to reducing the salinity of the fermentation broth but without a sacrifice of ectoine/hydroxyectoine production. With the fast development of functional genomics and synthetic biology, quite a lot of progress on the bioproduction of ectoine/hydroxyectoine has been achieved in recent years. The importation and expression of an ectoine producing pathway in a non-halophilic chassis has so far achieved the highest titer of ectoine (~ 65 g/L), while rational flux-tuning of halophilic chassis represents a promising strategy for the next-generation of ectoine industrial production. However, efficient conversion of ectoine to hydroxyectoine, which could benefit from a clearer understanding of the ectoine hydroxylase, is still a challenge to date.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Vías Biosintéticas , Fermentación , Halomonas/metabolismo , Aminoácidos Diaminos/análisis , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Reactores Biológicos/microbiología , Halomonas/genética , Presión Osmótica , Salinidad
13.
Biotechnol Lett ; 43(4): 825-834, 2021 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-33502660

RESUMEN

OBJECTIVES: For the stress from fermenters, downstream processing equipment, and wastewater treatment to be alleviated, lowering salt-dependence in the ectoine synthesis process is of great significance in the moderately halotolerant Halomonas hydrothermalis Y2. RESULTS: In H. hydrothermalis Y2, the σ70- and σ38-controlled promoters of ectA are predicted to be involved in the osmotic regulation of ectoine synthesis. By substituting the ectA promoter with a promoter P265 that identified in the outer membrane pore protein E of H. hydrothermalis Y2, the salt dependence of ectoine synthesis was significantly decreased. In the 500-ml flask containing various NaCl contents, the engineered strain (p/Y2/△ectD/△doeA) showed a remarkably enhanced ability in ectoine synthesis, especially under lower saline stress. After a 36-h fed-batch fermentation in the 1-l fermenter, p/Y2/△ectD/△doeA synthesized 11.5 g ectoine l-1 in the presence of 60 g NaCl-1 l, with a high 0.32 g ectoine l-1 h-1 productivity, a specific productivity of 512.2 mg ectoine per g cell dry weight (CDW)-1, and an excretion ratio of 67 % ectoine. CONCLUSIONS: As no impaired growth was observed in strain p/Y2/△ectD/△doeA while ectoine synthesis was increased, this promoter engineering strategy provides a practical protocol for lowering the salt-dependence of ectoine synthesis in this moderately halotolerant strain.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Proteínas Bacterianas/genética , Técnicas de Cultivo Celular por Lotes/métodos , Halomonas/crecimiento & desarrollo , Proteínas de la Membrana Bacteriana Externa/genética , Reactores Biológicos/microbiología , Medios de Cultivo/química , Fermentación , Perfilación de la Expresión Génica , Regulación Bacteriana de la Expresión Génica , Ingeniería Genética , Halomonas/metabolismo , Regiones Promotoras Genéticas , Cloruro de Sodio/química
14.
Biotechnol Prog ; 37(1): e3073, 2021 01.
Artículo en Inglés | MEDLINE | ID: mdl-32862555

RESUMEN

Halomonas elongate produces ectoine to protect itselt from environmental stresses. In this research, important factors in the production of ectoine were optimized using statistical methods to achieve the best production efficiency in bioreactor. Screening important variables (ectoine, hydroxyectoine, l-aspartic acid, and glutamate) on H. elongate growth showed that ectoine and l-aspartic acid directly affect ectoine production. Two nanostructures, multiwalled carbon nanotube (MWCNT) and iron oxide nanoparticle (Fe2 O3 NPs), were used to increase the availability of substrate for the microorganism. The results showed that Fe2 O3 nanoparticles and MWCNT could have a negative or positive effect on bacterial growth and ectoine production depending on the concentration of nanoparticles. At optimized conditions, the amounts of bacterial growth and ectoine production in fermenter were 10.4 g/L and 14.25 g/L, respectively. Therefore, it could be concluded that nanoparticles improve bacterial growth and ectoine production at optimized concentrations.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Reactores Biológicos/microbiología , Halomonas/metabolismo , Hierro/química , Nanopartículas del Metal/química , Nanotubos de Carbono/química
15.
Pharmacol Res ; 164: 105389, 2021 02.
Artículo en Inglés | MEDLINE | ID: mdl-33352226

RESUMEN

The compatible solute ectoine is one of the most abundant and powerful cytoprotectant in the microbial world. Due to its unique ability to stabilize biological membranes and macromolecules it has been successfully commercialized as ingredient of various over-the-counter drugs, achieving primarily epithelial protection. While trying to elucidate the mechanism of its cell protective properties in in-vitro studies, a significant anti-inflammatory effect was documented for the small molecule. The tissue protective potential of ectoine considerably improved organ quality during preservation. In addition, ectoine and derivatives have been demonstrated to significantly decrease inflammatory cytokine production, thereby alleviating the inflammatory response following organ transplantation, and launching new therapeutic options for pathologies such as Inflammatory Bowel Disease (IBD) and Chronic Obstructive Pulmonary Disease (COPD). In this review, we aim to summarize the knowledge of this fairly nascent field of the anti-inflammatory potential of diverse ectoines. We also point out that this promising field faces challenges in its biochemical and molecular substantiations, including defining the molecular mechanisms of the observed effects and their regulation. However, based on their potent cytoprotective, anti-inflammatory, and non-toxic properties we believe that ectoines represent promising candidates for risk free interventions in inflammatory pathologies with steeply increasing demands for new therapeutics.


Asunto(s)
Aminoácidos Diaminos/administración & dosificación , Antiinflamatorios/administración & dosificación , Enfermedades Inflamatorias del Intestino/tratamiento farmacológico , Enfermedades Pulmonares/tratamiento farmacológico , Aminoácidos Diaminos/biosíntesis , Aminoácidos Diaminos/farmacocinética , Animales , Antiinflamatorios/farmacocinética , Disponibilidad Biológica , Sistemas de Liberación de Medicamentos , Eucariontes/metabolismo , Humanos , Células Procariotas/metabolismo
16.
Mar Biotechnol (NY) ; 22(5): 651-660, 2020 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-32827070

RESUMEN

Salinivibrio proteolyticus M318, a halophilic bacterium isolated from fermented shrimp paste, is able to produce polyhydroxyalkanoate (PHA) from different carbon sources. In this study, we report the whole-genome sequence of strain M138, which comprises 2 separated chromosomes and 2 plasmids, and the complete genome contains 3,605,935 bp with an average GC content of 49.9%. The genome of strain M318 contains 3341 genes, 98 tRNA genes, and 28 rRNA genes. The 16S rRNA gene sequence and average nucleotide identity analysis associated with morphological and biochemical tests showed that this strain has high homology to the reference strain Salinivibrio proteolyticus DSM 8285. The genes encoding key enzymes for PHA and ectoine synthesis were identified from the bacterial genome. In addition, the TeaABC transporter responsible for ectoine uptake from the environment and the operon doeABXCD responsible for the degradation of ectoine were also detected. Strain M318 was able to produce poly(3-hydroxybutyrate) [P(3HB)] from different carbon sources such as glycerol, maltose, glucose, fructose, and starch. The ability to produce ectoines at different NaCl concentrations was investigated. High ectoine content of 26.2% of cell dry weight was obtained by this strain at 18% NaCl. This report provides genetic information regarding adaptive mechanisms of strain M318 to stress conditions, as well as new knowledge to facilitate the application of this strain as a bacterial cell factory for the production of PHA and ectoine.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Polihidroxialcanoatos/biosíntesis , Vibrionaceae/metabolismo , Vías Biosintéticas/genética , Alimentos Fermentados/microbiología , Microbiología de Alimentos , Genoma Bacteriano/genética , Plásmidos , Salinidad , Vibrionaceae/enzimología , Vibrionaceae/genética
17.
Nat Commun ; 11(1): 3313, 2020 07 03.
Artículo en Inglés | MEDLINE | ID: mdl-32620759

RESUMEN

Ectoine, a compatible solute synthesized by many halophiles for hypersalinity resistance, has been successfully produced by metabolically engineered Halomonas bluephagenesis, which is a bioplastic poly(3-hydroxybutyrate) producer allowing open unsterile and continuous conditions. Here we report a de novo synthesis pathway for ectoine constructed into the chromosome of H. bluephagenesis utilizing two inducible systems, which serve to fine-tune the transcription levels of three clusters related to ectoine synthesis, including ectABC, lysC and asd based on a GFP-mediated transcriptional tuning approach. Combined with bypasses deletion, the resulting recombinant H. bluephagenesis TD-ADEL-58 is able to produce 28 g L-1 ectoine during a 28 h fed-batch growth process. Co-production of ectoine and PHB is achieved to 8 g L-1 ectoine and 32 g L-1 dry cell mass containing 75% PHB after a 44 h growth. H. bluephagenesis demonstrates to be a suitable co-production chassis for polyhydroxyalkanoates and non-polymer chemicals such as ectoine.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Halomonas/metabolismo , Hidroxibutiratos/metabolismo , Poliésteres/metabolismo , Biomasa , Vías Biosintéticas/genética , Cromatografía Liquida/métodos , Halomonas/genética , Halomonas/crecimiento & desarrollo , Ingeniería Metabólica/métodos , Polihidroxialcanoatos/química , Polihidroxialcanoatos/metabolismo , Espectrometría de Masas en Tándem/métodos
18.
Curr Microbiol ; 77(8): 1412-1418, 2020 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-32189048

RESUMEN

Ectoine is widely produced by various bacteria as a natural cell protectant against environment stress, e.g., osmotic and temperature stress. Its protective properties therefore exhibit high commercial value, especially in agriculture, medicine, cosmetics, and biotechnology. Here, we successfully constructed an engineered Escherichia coli for the heterologous production of ectoine. Firstly, the ectABC genes from Halomonas elongata were introduced into E. coli MG1655 to produce ectoine without high osmolarity. Subsequently, lysA gene was deleted to weaken the competitive L-lysine biosynthesis pathway and ectoine bioconversion was further optimized, leading to an increase of ectoine titer by 16.85-fold. Finally, at the low cell density of 5 OD600/mL in Erlenmeyer flask, the concentration of extracellular ectoine was increased to 3.05 mg/mL. At the high cell density of 15 OD600/mL, 12.7 g/L of ectoine was achieved in 24 h and the overall yield is 1.27 g/g glycerol and sodium aspartate. Our study herein provides a feasible and valuable biosynthesis pathway of ectoine with a potential for large-scale industrial production using simple and cheap feedstocks.


Asunto(s)
Aminoácidos Diaminos/biosíntesis , Escherichia coli/genética , Escherichia coli/metabolismo , Redes y Vías Metabólicas , Ácido Aspártico/metabolismo , Proteínas Bacterianas/genética , Fermentación , Glicerol/metabolismo , Halomonas/genética , Microbiología Industrial , Ingeniería Metabólica
19.
FEBS J ; 287(21): 4641-4658, 2020 11.
Artículo en Inglés | MEDLINE | ID: mdl-32112674

RESUMEN

l-2,4-diaminobutyric acid (DABA) aminotransferases can catalyze the formation of amines at the distal ω-position of substrates, and is the intial and rate-limiting enzyme in the biosynthesis pathway of the cytoprotecting molecule (S)-2-methyl-1,4,5,6-tetrahydro-4-pyrimidine carboxylic acid (ectoine). Although there is an industrial interest in the biosynthesis of ectoine, the DABA aminotransferases remain poorly characterized. Herein, we present the crystal structure of EctB (2.45 Å), a DABA aminotransferase from Chromohalobacter salexigens DSM 3043, a well-studied organism with respect to osmoadaptation by ectoine biosynthesis. We investigate the enzyme's oligomeric state to show that EctB from C. salexigens is a tetramer of two functional dimers, and suggest conserved recognition sites for dimerization that also includes the characteristic gating loop that helps shape the active site of the neighboring monomer. Although ω-transaminases are known to have two binding pockets to accommodate for their dual substrate specificity, we herein provide the first description of two binding pockets in the active site that may account for the catalytic character of DABA aminotransferases. Furthermore, our biochemical data reveal that the EctB enzyme from C. salexigens is a thermostable, halotolerant enzyme with a broad pH tolerance which may be linked to its tetrameric state. Put together, this study creates a solid foundation for a deeper structural understanding of DABA aminotransferases and opening up for future downstream studies of EctB's catalytic character and its redesign as a better catalyst for ectoine biosynthesis. In summary, we believe that the EctB enzyme from C. salexigens can serve as a benchmark enzyme for characterization of DABA aminotransferases. DATABASE: Structural data are available in PDB database under the accession number 6RL5.


Asunto(s)
Aminoácidos Diaminos/química , Aminobutiratos/química , Proteínas Bacterianas/química , Transaminasas/química , Secuencia de Aminoácidos , Aminoácidos Diaminos/biosíntesis , Aminobutiratos/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Sitios de Unión/genética , Vías Biosintéticas/genética , Dominio Catalítico , Chromohalobacter/enzimología , Chromohalobacter/genética , Cristalografía por Rayos X , Modelos Moleculares , Conformación Proteica , Multimerización de Proteína , Estabilidad Proteica , Especificidad por Sustrato , Transaminasas/genética , Transaminasas/metabolismo
20.
Biotechnol Lett ; 42(6): 1003-1017, 2020 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-32062816

RESUMEN

PURPOSE: Numerous applications of compatible salts (osmolytes) as ectoine in food and pharmaceutical industries have been intensively increased nowadays. Decreasing the cost of industrial production of ectoine using low-cost cultivation media and improving the yield through modeling procedures are the main scopes of the present study. METHODS: Three statistical design experiments have been successfully applied for screening the parameters affecting the production process, studying the relations among parameters and optimizing the production using response surface methodology. RESULTS: A novel semi-synthetic medium based on hydrolyzed corn gluten meal has been developed to cultivate moderate halophilic bacterial strains; Vibrio sp. CS1 and Salinivibrio costicola SH3, and support ectoine synthesis under salinity stress. Two regression equations describe the production process in the new medium have been formulated for each bacterial strain. Response surface optimizer of the central composite model predicts the maximum ectoine production is achieved at incubation time; 63.7 h, pH; 7.47 and salinity; 7.27% for Vibrio sp. CS1 whereas these variables should be adjusted at 56.95 h, 7.089 and 10.34%; on the same order regarding Salinivibrio costicola SH3. In application studies, 50 µg ectoine decreases RBCs hemolysis due to streptolysin O toxin by 21.7% within ten minutes. In addition, 2% ectoine succeeds to increase the viability of lactic acid bacteria in Yogurt as a classic example of functional food during the storage period (7 days). CONCLUSION: The present study emphasizes on modeling the process of ectoine production by halophilic bacteria as well as its activity as a cryoprotectant agent.


Asunto(s)
Aminoácidos Diaminos , Concentración Osmolar , Aminoácidos Diaminos/biosíntesis , Aminoácidos Diaminos/metabolismo , Aminoácidos Diaminos/farmacología , Medios de Cultivo/química , Medios de Cultivo/metabolismo , Concentración de Iones de Hidrógeno , Lactobacillales/efectos de los fármacos , Modelos Estadísticos , Salinidad , Vibrio/metabolismo , Vibrionaceae/metabolismo , Yogur/microbiología
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