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1.
Food Chem ; 449: 139304, 2024 Aug 15.
Artículo en Inglés | MEDLINE | ID: mdl-38608611

RESUMEN

To evaluate the effect of high voltage pulsed electric field (PEF) treatment (10-20 kV/cm, 5-15 min) on the structural characteristics and sensitization of crude extracts of arginine kinase from Fenneropenaeus chinensis. By simulated in vitro gastric juice digestion (SGF), intestinal juice digestion (SIF) and enzyme-linked immunosorbent assay (ELISA), AK sensitization was reduced by 42.5% when treated for 10 min at an electric field intensity of 15 kV/cm. After PEF treatment, the α-helix content decreased, and the α-helix content gradually changed to ß-sheet and ß-turn. Compared to the untreated group, the surface hydrophobicity increased and the sulfhydryl content decreased. SEM and AFM analyses showed that the treated sample surface formed a dense porous structure and increased roughness. The protein content, dielectric properties, and amino acid content of sample also changed significantly with the changes in the treatment conditions. Non-thermal PEF has potential applications in the development of hypoallergenic foods.


Asunto(s)
Arginina Quinasa , Penaeidae , Animales , Arginina Quinasa/química , Arginina Quinasa/inmunología , Arginina Quinasa/metabolismo , Penaeidae/química , Penaeidae/enzimología , Penaeidae/inmunología , Electricidad , Interacciones Hidrofóbicas e Hidrofílicas , Proteínas de Insectos/química , Proteínas de Insectos/metabolismo , Humanos , Alérgenos/química , Alérgenos/inmunología
2.
Mol Nutr Food Res ; 68(9): e2300911, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38629315

RESUMEN

SCOPE: Arginine kinase (AK) is an important enzyme for energy metabolism of invertebrate cells by participating in the maintenance of constant levels of ATP. However, AK is also recognized as a major allergen in insects and crustaceans capable of cross-reactivity with sera of patients sensitized to orthologous proteins. In the perspective of introducing insects or their derivatives in the human diet in Western world, it is of primary importance to evaluate possible risks for allergic consumers. METHODS AND RESULTS: This work reports the identification and characterization of AK from Hermetia illucens commonly known as the black soldier fly, a promising insect for human consumption. To evaluate allergenicity of AK from H. illucens, putative linear and conformational epitopes are identified by bioinformatics analyses, and Dot-Blot assays are carried out by using sera of patients allergic to shrimp or mites to validate the cross-reactivity. Gastrointestinal digestion reduces significantly the linear epitopes resulting in lower allergenicity, while the secondary structure is altered at increasing temperatures supporting the possible loss or reduction of conformational epitopes. CONCLUSION: The results indicate that the possible allergenicity of AK should be taken in consideration when dealing with novel foods containing H. illucens or its derivatives.


Asunto(s)
Alérgenos , Arginina Quinasa , Hipersensibilidad a los Alimentos , Animales , Humanos , Alérgenos/inmunología , Secuencia de Aminoácidos , Arginina Quinasa/química , Arginina Quinasa/genética , Arginina Quinasa/metabolismo , Reacciones Cruzadas , Dípteros/inmunología , Insectos Comestibles/inmunología , Epítopos/inmunología , Hipersensibilidad a los Alimentos/inmunología , Proteínas de Insectos/inmunología , Proteínas de Insectos/metabolismo , Proteínas de Insectos/genética , Simuliidae/inmunología
3.
Molecules ; 27(3)2022 Jan 28.
Artículo en Inglés | MEDLINE | ID: mdl-35164149

RESUMEN

Arginine kinase (AK) plays a crucial role in the survival of Daphnia magna, a water flea and a common planktonic invertebrate sensitive to water pollution, owing to the production of bioenergy. AK from D. magna (DmAK) has four highly conserved histidine residues, namely, H90, H227, H284, and H315 in the amino acid sequence. In contrast to DmAK WT (wild type), the enzyme activity of the H227A mutant decreases by 18%. To identify the structure-function relationship of this H227A mutant enzyme, the crystal 3D X-ray structure has been determined and an unfolding assay using anilino-1-naphthalenesulfonic acid (ANS) fluorescence has been undertaken. The results revealed that when compared to the DmAK WT, the hydrogen bonding between H227 and A135 was broken in the H227A crystal structure. This suggests that H227 residue, closed to the arginine binding site, plays an important role in maintaining the structural stability and maximizing the enzyme activity through hydrogen bonding with the backbone oxygen of A135.


Asunto(s)
Arginina Quinasa/química , Proteínas de Artrópodos/química , Daphnia/enzimología , Animales , Arginina Quinasa/genética , Arginina Quinasa/metabolismo , Proteínas de Artrópodos/genética , Proteínas de Artrópodos/metabolismo , Cristalografía por Rayos X , Daphnia/química , Daphnia/genética , Daphnia/metabolismo , Estabilidad de Enzimas , Modelos Moleculares , Mutación Puntual , Conformación Proteica , Especificidad por Sustrato
4.
J Sci Food Agric ; 102(8): 3435-3445, 2022 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-34837649

RESUMEN

BACKGROUND: Molluscan shellfish, including oysters, often cause allergic reactions in sensitive people throughout the world. It has been demonstrated that arginine kinase (AK) is one of the major allergens of oyster. The present study aimed to evaluate the immunoreactivity and structure of oyster AK as affected by heat treatment, pH change, and in vitro digestion. What is more, the immunoglobulin E-binding epitopes of this allergen were also predicted and validated. RESULTS: Thermal and pH assays revealed that AK was unstable at temperature >40 °C or pH ≤5.0 by sodium dodecyl sulfate polyacrylamide gel electrophoresis and circular dichroism, and the digestibility assays suggested that AK was more easily digested by pepsin than by trypsin and chymotrypsin. The potential epitopes were predicted through immunoinformatics tools, and seven linear epitopes were identified by indirect competition enzyme-linked immunosorbent assay with pooled sera and individual serum from oyster-allergic patients. The critical amino acids in each epitope were also confirmed using mutant peptides. These linear epitopes and critical amino acids were apt to distribute on the outer surface of homology-based AK model. Moreover, the three denaturants (sodium dodecyl sulfate, ß-mercaptoethanol, and urea) can destroy the spatial structure of AK and increase or reduce its allergenicity by denaturation treatments. CONCLUSION: Processing conditions lay the foundation for the variation of allergenicity. Seven linear epitopes and their critical amino acids were identified by indirect competitive enzyme-linked immunosorbent assay. These findings will be helpful in allergy diagnosis and development of hypoallergenic products in the near future. © 2021 Society of Chemical Industry.


Asunto(s)
Arginina Quinasa , Crassostrea , Alérgenos/química , Secuencia de Aminoácidos , Aminoácidos , Animales , Arginina Quinasa/química , Arginina Quinasa/metabolismo , Epítopos/química , Humanos , Dodecil Sulfato de Sodio
5.
Fish Shellfish Immunol ; 109: 82-86, 2021 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-33352337

RESUMEN

Arginine kinase (AK, EC 2.7.3.3) plays an important role in cells with high, fluctuating energy requirements. In invertebrates, AK is the major phosphagen kinase that modulates the energy metabolism. Here, the full-length cDNA sequence encoding arginine kinase (EcAK) was obtained from the Exopalaemon carinicauda. The complete nucleotide sequence of EcAK contained a 1068 bp open reading frame (ORF) encoding EcAK precursor of 355 amino acids. The genomic DNA fragment of EcAK with the corresponding cDNA sequence is composed of 4 exons and 3 introns. The domain architecture of the deduced EcAK protein contained an ATP-gua_PtransN domain and an ATP-gua_Ptrans domain. EcAK mRNA was predominantly expressed in the muscle. The expression of EcAK in the prawns challenged with Vibrio parahaemolyticus and Aeromonas hydrophila changed in a time-dependent manner. Then, EcAK was recombinantly expressed in Pichia pastoris and the purified recombinant EcAK had the same enzymatic characterization as AK from the muscle of Euphausia superba. In conclusion, EcAK may play the same biological activity in E. carinicauda as those from other crustaceans.


Asunto(s)
Arginina Quinasa/genética , Arginina Quinasa/inmunología , Regulación de la Expresión Génica/inmunología , Inmunidad Innata/genética , Palaemonidae/genética , Palaemonidae/inmunología , Aeromonas hydrophila/fisiología , Secuencia de Aminoácidos , Animales , Arginina Quinasa/química , Proteínas de Artrópodos/química , Proteínas de Artrópodos/genética , Proteínas de Artrópodos/inmunología , Secuencia de Bases , Perfilación de la Expresión Génica , Alineación de Secuencia , Vibrio parahaemolyticus/fisiología
6.
J Insect Sci ; 20(4)2020 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-32706873

RESUMEN

Several parts of the world regularly consume termites. Arthropod arginine kinase proteins often cross-react with human immunoblobulin E (IgE) antibodies and they are considered pan-allergens. The Formosan subterranean termite Coptotermes formosanus (C. formosanus (Shiraki) [Isoptera: Rhinotermitidae]), along with cockroaches, belong to the order Blattodea and they are common household pests in tropical and subtropical parts of the world. An sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) band migrating at approximately 37 kDa in C. formosanus termite extracts cross-reacted with IgE from five cockroach allergic patient samples by immunoblot. Liquid chromatography-mass spectrometry analysis of gel slices from the corresponding region of a gel indicated several peptides from the excised region were identical to the American cockroach arginine kinase allergen, Per a 9. The sequence of the full-length C. formosanus arginine kinase gene indicates the protein it encodes is 96% identical to American cockroach Per a 9, 94% identical to German cockroach Bla g 9, and 82-84% identical to shrimp arginine kinase proteins Pen m 2, Lit v 2, and Cra c 2. Full-length C. formosanus arginine kinase was fused to a glutathione S-transferase tag and recombinantly expressed and purified from Escherichia coli by affinity chromatography. The recombinant protein was recognized by IgE from 11 of 12 cockroach or shrimp allergic samples, but did not cross-react with dust mite allergic or peanut/tree nut allergic samples. The results of this study indicate the C. formosanus arginine kinase cross-reacts with cockroach and shrimp allergic IgE, and if consumed would likely act as an allergen.


Asunto(s)
Arginina Quinasa/genética , Expresión Génica , Proteínas de Insectos/genética , Isópteros/genética , Secuencia de Aminoácidos , Animales , Arginina Quinasa/química , Arginina Quinasa/metabolismo , Secuencia de Bases , Clonación Molecular , Proteínas de Insectos/química , Proteínas de Insectos/metabolismo , Isópteros/enzimología , Alineación de Secuencia
7.
Aquat Toxicol ; 222: 105452, 2020 May.
Artículo en Inglés | MEDLINE | ID: mdl-32092594

RESUMEN

Arginine kinase (AK), an important member of the phosphokinase family, is involved in temporal and spatial adenosine triphosphate (ATP) buffering systems. AK plays an important role in physiological function and metabolic regulations, in particular tissues with high and fluctuating energy demands. In present study, four AK genes were firstly identified from Yesso scallop (Patinopecten yessoensis) genome, respectively named PyAK1-4. PyAKs have highly conserved structures with a six-exon/five-exon structure, except for PyAK3. PyAK3 contains an unusual two-domain structure and a "bridge intron" between the two domains, which may originate from gene duplication and subsequent fusion. Phylogenetic analysis showed that all PyAKs belonged to an AK supercluster together with other AK proteins from Mollusca, Platyhelminthes, Arthropoda, and Nematode. A transcriptome database demonstrated that PyAK3 and PyAK4 were the main functional executors with high expression level during larval development and in adult tissues, while PyAK1 and PyAK2 were expressed at a low level. Furthermore, both PyAK2 and PyAK3 showed notably high expression in the male gonad, and PyAK4 was broadly expressed in almost all tissues with the highest level in striated muscle, indicating a tissue-specific expression pattern of PyAKs. In addition, quantitative real-time PCR results demonstrated that the expression of PyAK2, PyAK3 and PyAK4 were significantly upregulated in response to pH stress, especially in an extremely acidifying condition (pH 6.5), revealing the possible involvement of PyAKs in energetic homeostasis during environmental changes. Collectively, a comprehensive analysis of PyAKs was conducted in P. yessoensis. The diversity of PyAKs and their specific expression patterns promote a better understanding of energy metabolism in the growth, development and environmental response of P. yessoensis.


Asunto(s)
Arginina Quinasa/metabolismo , Pectinidae/enzimología , Estrés Fisiológico/efectos de los fármacos , Transcriptoma/efectos de los fármacos , Contaminantes Químicos del Agua/toxicidad , Aclimatación/efectos de los fármacos , Aclimatación/genética , Animales , Arginina Quinasa/química , Arginina Quinasa/genética , Bases de Datos Genéticas , Metabolismo Energético/efectos de los fármacos , Metabolismo Energético/genética , Genoma , Concentración de Iones de Hidrógeno , Pectinidae/genética , Filogenia , Estructura Secundaria de Proteína , Reacción en Cadena en Tiempo Real de la Polimerasa , Agua de Mar/química , Alineación de Secuencia , Estrés Fisiológico/genética
8.
J Agric Food Chem ; 67(17): 4958-4966, 2019 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-30966750

RESUMEN

The mud crab ( Scylla paramamosain) is widely consumed but can cause a severe food allergic reaction. To reduce allergenicity to arginine kinase (AK), site-directed mutagenesis was used to destroy disulfide bonds or mutate critical amino acids of conformational epitopes. Three hypoallergenic mutant AKs (mAK1, mAK2, and mAK3) were generated, with the immunoreactivity decreasing by 54.2, 40.1, and 71.4%, respectively. In comparison to recombinant AK (rAK), the structure of mAKs was clearly changed. Additionally, antisense peptides were designed on the basis of linear epitopes and pepsin-cutting sites of AK. Five peptide aptamers were screened by molecular docking and then analyzed by the immunoglobulin E inhibition enzyme-linked immunosorbent assay and human Laboratory of Allergic Diseases 2 mast cell degranulation assay. The peptide aptamers could significantly inhibit allergenicity of rAK and mAKs, and the inhibitory effect of peptide aptamer 3 was slightly better than the others. These results provide synergistic methods to reduce allergenicity to AK, which could be applied to other shellfish allergens.


Asunto(s)
Aptámeros de Péptidos/genética , Arginina Quinasa/genética , Arginina Quinasa/inmunología , Proteínas de Artrópodos/genética , Proteínas de Artrópodos/inmunología , Braquiuros/inmunología , Hipersensibilidad a los Mariscos/inmunología , Adolescente , Adulto , Alérgenos/química , Alérgenos/genética , Alérgenos/inmunología , Secuencia de Aminoácidos , Animales , Aptámeros de Péptidos/inmunología , Arginina Quinasa/química , Proteínas de Artrópodos/química , Braquiuros/enzimología , Braquiuros/genética , Epítopos/química , Epítopos/genética , Epítopos/inmunología , Femenino , Humanos , Inmunoglobulina E/inmunología , Masculino , Simulación del Acoplamiento Molecular , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Adulto Joven
9.
Artículo en Inglés | MEDLINE | ID: mdl-30641133

RESUMEN

Arginine kinase (AK) plays a critical role in insect energy metabolism and has been proposed to be a potential insecticide target for commercial exploitation. In this study, the full length cDNA encoding a typical group 1 insect AK (FoAK) was isolated from the western flower thrips (WFT), Frankliniella occidentalis (Pergande). Sequence analysis showed that FoAK contains an open reading frame of 1068 nucleotides, which encods a protein of 355 amino acid residues including the signature sequence pattern of ATP-guanidino kinases. Genomic structure analysis showed that the coding region of FoAK contains five exons connected by four introns. RT-qPCR analysis revealed that the mRNA expression of FoAK was developmentally regulated with the lowest level in prepupal stage. Enzymatic activity analysis of the recombinant enzymes expressed in Escherichia coli showed that FoAK is highly stereo specific for L-arginine versus D-arginine and the apparent Michaelis constant for L-arginine (KmArg) is comparable to that of AKs from a variety of species. This research should enable further investigation of the function as well as in vitro screening for inhibitors of FoAK.


Asunto(s)
Arginina Quinasa , Expresión Génica , Proteínas de Insectos , Especies Introducidas , Thysanoptera , Animales , Arginina Quinasa/biosíntesis , Arginina Quinasa/química , Arginina Quinasa/genética , Proteínas de Insectos/biosíntesis , Proteínas de Insectos/química , Proteínas de Insectos/genética , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética , Thysanoptera/enzimología , Thysanoptera/genética
10.
Food Chem ; 271: 597-605, 2019 Jan 15.
Artículo en Inglés | MEDLINE | ID: mdl-30236721

RESUMEN

Shellfish are one of the most common causes of food allergy. Arginine kinase (AK) is known as an important allergen in shellfish. In the present study, AK from crab (Scylla paramamosain) was purified and its crystal structure was determined. A comparison of AK from S. paramamosain to AKs of other species showed high amino acid sequence and secondary structure identity, while the superposition of crystal structures of AKs from different species revealed only slight differences. Similarity of the linear epitope regions among species was observed in the epitope alignment of AKs; conformational epitopes were located in the regions where secondary structure was conserved. The structure of S. paramamosain AK is an accurate template for the analysis of the IgE binding pattern, and the structure conservation and epitope similarity of AKs among species could help to inform our understanding of the cross-reactivity and contribute to the prediction of cross-reactivity related epitopes.


Asunto(s)
Arginina Quinasa/química , Arginina Quinasa/inmunología , Braquiuros/enzimología , Hipersensibilidad a los Mariscos , Alérgenos/química , Alérgenos/inmunología , Secuencia de Aminoácidos , Animales , Inmunoglobulina E , Alineación de Secuencia
11.
Protein J ; 37(6): 581-588, 2018 12.
Artículo en Inglés | MEDLINE | ID: mdl-30328548

RESUMEN

Paramecium tetraurelia expresses four types of arginine kinase (AK1-AK4). In a previous study, we showed that AK3 is characterized by typical arginine substrate inhibition, where enzymatic activity markedly decreases near a concentration of 1 mM of arginine substrate. This is in sharp contrast to the three other AK types, which obey the Michaelis-Menten reaction curve. Since cellular arginine concentration in another ciliate Tetrahymena is estimated to be 3-15 mM in vivo, Paramecium AK3 likely functions in conditions that are strongly affected by substrate inhibition. The purpose of this work is to find some novel aspect on the kinetic mechanism of the substrate inhibition of Paramecium AK3 enzyme. Substrate inhibition kinetics for AK3 were analyzed using three models and their validity were evaluated with three static parameters (R2, AICc, and Sy.x). The most accurate model indicated that not only ES but also the SES complex reacts to form products, the latter being the complex with two substrates in the active center. The maximum reaction rate for the SES complex, VmaxSES = 30.4 µmol Pi/min/mg protein, was one-eighth of the ES complex, VmaxES = 241.7. The dissociation constant for the SES complex (KiSES: 0.34 mM) was two times smaller than that of the ES complex (KsES: 0.61 mM), suggesting that after the primary binding of the arginine substrate (ES complex formation), the binding of a second arginine to the secondarily induced inhibitory site is accelerated to form an SES complex with a lower VmaxSES. The same kinetics were used for the S79A, S80A, and V81A mutants. The results indicate that the S79 residue is significantly involved in the process of binding the second arginine substrate. Herein, the KiSES value was ten times (3.62 mM) the value for the wild-type (0.34 mM), weakening substrate inhibition. In contrast, VmaxES and VmaxSES values for the mutants decreased by one-third, except for the VmaxSES of the S79A mutant, which had a value that was comparable with the value for the wild-type.


Asunto(s)
Arginina Quinasa/química , Paramecium/enzimología , Proteínas Protozoarias/química , Sustitución de Aminoácidos , Arginina Quinasa/genética , Sitios de Unión , Cinética , Mutación Missense , Paramecium/genética , Proteínas Protozoarias/genética , Especificidad por Sustrato/genética
12.
Talanta ; 189: 353-358, 2018 Nov 01.
Artículo en Inglés | MEDLINE | ID: mdl-30086930

RESUMEN

A sequential "turn-off" surface enhance Raman scattering (SERS) assay platform for the detection of protein arginine kinase McsB is constructed based on arginine N-phosphorylation process. The positive charged peptide initiates the aggregation of labelled Au nanoparticles (AuNPs) to form ''Hot Spots'', resulting to a higher SERS intensity. However, the aggregation of AuNPs could also be disbanded by the addition of McsB in which the peptides are phosphorylated on arginine residues, leading to the sharp decline of SERS signal, on account of two negative charges on the phosphate group. By this strategy, a novel ''turn-off'' SERS biosensor for McsB detection based on arginine N-phosphorylation was established with high sensitivity, selectivity and simplicity. Compared with other non-enzymatic amplification methods, the sensitivity of this newly demonstrated method was improved effectively. The detection limit for McsB is 46 pM. Besides, some controlled experiments show that the assay possesses good selectivity, which is mainly decided by the specificity of kinase. Since some kinases are important biomarkers, this assay could make great contribution in biomarkers detection in complex matrices which is based on signal amplification.


Asunto(s)
Arginina Quinasa/química , Arginina Quinasa/metabolismo , Arginina/metabolismo , Pruebas de Enzimas/métodos , Nitrógeno/metabolismo , Espectrometría Raman , Secuencia de Aminoácidos , Bacillus subtilis/enzimología , Oro/química , Nanopartículas del Metal/química , Fosforilación
13.
J Agric Food Chem ; 66(11): 2934-2943, 2018 Mar 21.
Artículo en Inglés | MEDLINE | ID: mdl-29499608

RESUMEN

The Maillard reaction was established to reduce the sensitization of tropomyosin (TM) and arginine kinase (AK) from Scylla paramamosain, and the mechanism of the attenuated sensitization was investigated. In the present study, the Maillard reaction conditions were optimized for heating at 100 °C for 60 min (pH 8.5) with arabinose. A low level of allergenicity in mice was shown by the levels of allergen-specific antibodies, and more Th1 and less Th2 cells cytokines produced and associated transcription factors with the Maillard reacted allergen (mAllergen). The tolerance potency in mice was demonstrated by the increased ratio of Th1/Th2 cytokines. Moreover, mass spectrometry analysis showed that some key amino acids of IgE-binding epitopes (K112, R125, R133 of TM; K33, K118, R202 of AK) were modified by the Maillard reaction. The Maillard reaction with arabinose reduced the sensitization of TM and AK, which may be due to the masked epitopes.


Asunto(s)
Arginina Quinasa/química , Braquiuros/química , Braquiuros/inmunología , Tropomiosina/química , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Alérgenos/química , Alérgenos/inmunología , Animales , Arginina Quinasa/inmunología , Niño , Preescolar , Culinaria , Epítopos/química , Epítopos/inmunología , Femenino , Calor , Humanos , Inmunoglobulina E/inmunología , Lactante , Reacción de Maillard , Masculino , Ratones , Ratones Endogámicos BALB C , Persona de Mediana Edad , Mariscos/análisis , Hipersensibilidad a los Mariscos/inmunología , Células TH1/inmunología , Células Th2/inmunología , Tropomiosina/inmunología , Adulto Joven
14.
J Agric Food Chem ; 66(11): 2944-2953, 2018 Mar 21.
Artículo en Inglés | MEDLINE | ID: mdl-29481756

RESUMEN

Chinese shrimp ( Penaeus chinensis) is widely cultured and consumed in Asia but is also a major food allergen locally. Although they may be the foundation for preventing and treating allergies, the allergenic epitopes of the major allergens tropomyosin (TM) and arginine kinase (AK) in Penaeus chinensis have not been identified. Here, we applied Immunoinfo-CB (immunoinformatics coupled with competitive-binding strategy) to address the point. Potential allergenic epitopes of TM and AK were predicted by multiple immunoinformatics tools, followed by validating with inhibitory dot-blot assay, indirect competition ELISA, and mast cell degranulation assay. Furthermore, critical amino acids in allergenic epitopes were also identified by Immunoinfo-CB. Our findings provide new insight into allergenic epitopes and critical amino acids of TM and AK responsible for the anaphylactic response. The Immunoinfo-CB therefore offers promises for characterization of IgE-binding epitopes that might be used as new targets for immunotherapy of food allergy.


Asunto(s)
Alérgenos/química , Penaeidae/inmunología , Hipersensibilidad a los Mariscos/inmunología , Alérgenos/inmunología , Secuencia de Aminoácidos , Animales , Arginina Quinasa/química , Arginina Quinasa/inmunología , Unión Competitiva , Mapeo Epitopo , Epítopos/química , Epítopos/inmunología , Inmunoglobulina E/inmunología , Penaeidae/química , Tropomiosina/química , Tropomiosina/inmunología
15.
Int J Biol Macromol ; 111: 247-254, 2018 May.
Artículo en Inglés | MEDLINE | ID: mdl-29325742

RESUMEN

Arginine kinase (AK) catalyzes the reversible phosphorylation of arginine by ATP, yielding the phosphoarginine. Amino acid residues in the guanidine specificity (GS) region play important roles in the guanidine-recognition. However, little is known about roles of amino acid residue G66 in the GS region in proteins folding, activity and structural stability. In this study, a series of G66 mutations were constructed to investigate its roles in AK's structural stability and activity. Our studies revealed that mutations in this conserved site could cause pronounced loss of activity, conformational changes and structural stability. Spectroscopic experiments indicate that G66 mutations influences AK transition from the molten globule intermediate to the native state in folding process. These results provided herein may suggest that amino acid residue G66 may play a relatively important role in AK's activity and structural stability.


Asunto(s)
Aminoácidos/genética , Arginina Quinasa/química , Saltamontes/enzimología , Guanidina/química , Aminoácidos/química , Animales , Arginina Quinasa/genética , Estabilidad de Enzimas , Saltamontes/química , Cinética , Mutación , Desnaturalización Proteica , Pliegue de Proteína , Estructura Terciaria de Proteína
16.
Protein J ; 36(6): 502-512, 2017 12.
Artículo en Inglés | MEDLINE | ID: mdl-29022133

RESUMEN

The cDNA sequence of arginine kinase (AK) from the precious coral Corallium rubrum was assembled from transcriptome sequence data, and the deduced amino acid sequence of 364 residues was shown to conserve the structural features characteristic of AK. Based on the amino acid sequence, the DNA coding C. rubrum AK was synthesized by overlap extension PCR to prepare the recombinant enzyme. The following kinetic parameters were determined for the C. rubrum enzyme: K aArg (0.10 mM), K iaArg (0.79 mM), K aATP (0.23 mM), K iaATP (2.16 mM), and k cat (74.3 s-1). These are comparable with the kinetic parameters of other AKs. However, phylogenetic analysis suggested that the C. rubrum AK sequence has a distinct origin from that of other known cnidarian AKs with unusual two-domain structure. Using oligomers designed from the sequence of C. rubrum AK, the coding region of genomic DNA of another coral Paracorallium japonicum AK was successfully amplified. Although the nucleotide sequences differed between the two AKs at 14 positions in the coding region, all involved synonymous substitutions, giving the identical amino acid sequence. The P. japonicum AK gene contained one intron at a unique position compared with other cnidarian AK genes. Together with the observations from phylogenetic analysis, the comparison of exon/intron organization supports the idea that two distinct AK gene lineages are present in cnidarians. The difference in the nucleotide sequence between the coding regions of C. rubrum and P. japonicum AKs was 1.28%, which is twice that (0.54%) of mitochondrial DNA, is consistent with the general observation that the mitochondrial genome evolves slower than the nuclear one in cnidarians.


Asunto(s)
Antozoos/enzimología , Antozoos/genética , Arginina Quinasa/genética , Proteínas Recombinantes/genética , Animales , Antozoos/clasificación , Arginina Quinasa/química , Arginina Quinasa/metabolismo , ADN Complementario/genética , Escherichia coli/genética , Evolución Molecular , Filogenia , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Alineación de Secuencia
17.
J Struct Biol ; 200(3): 258-266, 2017 12.
Artículo en Inglés | MEDLINE | ID: mdl-28495594

RESUMEN

Arginine kinase catalyzes reversible phosphoryl transfer between arginine and ATP. Crystal structures of arginine kinase in an open, substrate-free form and closed, transition state analog (TSA) complex indicate that the enzyme undergoes substantial domain and loop rearrangements required for substrate binding, catalysis, and product release. Nuclear magnetic resonance (NMR) has shown that substrate-free arginine kinase is rigid on the ps-ns timescale (average S2=0.84±0.08) yet quite dynamic on the µs-ms timescale (35 residues with Rex, 12%), and that movements of the N-terminal domain and the loop comprising residues I182-G209 are rate-limiting on catalysis. Here, NMR of the TSA-bound enzyme shows similar rigidity on the ps-ns timescale (average S2=0.91±0.05) and substantially increased µs-ms timescale dynamics (77 residues; 22%). Many of the residues displaying µs-ms dynamics in NMR Carr-Purcell-Meiboom-Gill (CPMG) 15N backbone relaxation dispersion experiments of the TSA complex are also dynamic in substrate-free enzyme. However, the presence of additional dynamic residues in the TSA-bound form suggests that dynamics extend through much of the C-terminal domain, which indicates that in the closed form, a larger fraction of the protein takes part in conformational transitions to the excited state(s). Conformational exchange rate constants (kex) of the TSA complex are all approximately 2500s-1, higher than any observed in the substrate-free enzyme (800-1900s-1). Elevated µs-ms timescale protein dynamics in the TSA-bound enzyme is more consistent with recently postulated catalytic networks involving multiple interconnected states at each step of the reaction, rather than a classical single stabilized transition state.


Asunto(s)
Arginina Quinasa/química , Arginina Quinasa/metabolismo , Adenosina Difosfato/química , Adenosina Difosfato/metabolismo , Arginina/química , Arginina/metabolismo , Humanos , Modelos Moleculares , Nitratos/química , Nitratos/metabolismo , Isótopos de Nitrógeno , Resonancia Magnética Nuclear Biomolecular , Conformación Proteica , Dominios Proteicos
18.
Int J Biol Macromol ; 101: 653-659, 2017 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-28359889

RESUMEN

The ciliate Paramecium tetraurelia contains four arginine kinase genes (AK1-4). We detected cDNA for only three of the AKs (AK1-3) via PCR. Recombinant AK1-4 were expressed in Escherichia coli and their kinetics parameters determined. AK3 showed typical substrate inhibition toward arginine, and enzymatic activity markedly decreased when arginine concentration increased. This is the first example of substrate inhibition in wild-type phosphagen kinases. To explore the substrate inhibition mechanism, site-directed mutations were generated, targeting the amino acid sequence D-D-S-Q-V at positions 77-81 in P. tetraurelia AK3. Among the mutants, substrate inhibition was lost remarkably in the S79A mutant. In spite of high amino acid sequence identity (91%) between P. tetraurelia AK3 and AK4, the enzymatic activity of AK4 was less by 3% than that of AK3. We noticed that the conservative G298 was unusually replaced by R in P. tetraurelia AK4, and we constructed two mutants, R298G/AK4 and G298R/AK3. Enzymatic activity of the former mutant was comparable with that of the wild-type AK3, whereas that of the latter mutant was dramatically reduced. Thus, we concluded that the significantly low activity of P. tetraurelia AK4 is due to the residue R298.


Asunto(s)
Arginina Quinasa/antagonistas & inhibidores , Arginina Quinasa/metabolismo , Inhibidores Enzimáticos/metabolismo , Paramecium tetraurelia/enzimología , Secuencia de Aminoácidos , Arginina Quinasa/química , Arginina Quinasa/genética , Inhibidores Enzimáticos/farmacología , Cinética , Modelos Moleculares , Mutagénesis Sitio-Dirigida , Mutación , Conformación Proteica , ARN Mensajero/genética , ARN Mensajero/metabolismo
19.
J Am Chem Soc ; 139(13): 4846-4853, 2017 04 05.
Artículo en Inglés | MEDLINE | ID: mdl-28287709

RESUMEN

Arginine kinase (AK), which is a member of the phosphagen kinase family, serves as a model system for studying the structural and dynamic determinants of biomolecular enzyme catalysis of all major states involved of the enzymatic cycle. These states are the apo state (substrate free), the Michaelis complex analogue AK:Arg:Mg·AMPPNP (MCA), a product complex analogue AK:pAIE:Mg·ADP (PCA), and the transition state analogue AK:Arg:Mg·ADP:NO3- (TSA). The conformational dynamics of these states have been studied by NMR relaxation dispersion measurements of the methyl groups of the Ile, Leu, and Val residues at two static magnetic fields. Although all states undergo significant amounts of µs-ms time scale dynamics, only the MCA samples a dominant excited state that resembles the TSA, as evidenced by the strong correlation between the relaxation dispersion derived chemical shift differences Δω and the equilibrium chemical shift differences Δδ of these states. The average lifetime of the MCA is 36 ms and the free energy difference to the TSA-like form is 8.5 kJ/mol. It is shown that the conformational energy landscape of the Michaelis complex analogue is shaped in a way that at room temperature it channels passage to the transition state, thereby determining the rate-limiting step of the phosphorylation reaction of arginine. Conversely, relaxation dispersion experiments of the TSA reveal that it samples the structures of the Michaelis complex analogue or the apo state as its dominant excited state. This reciprocal behavior shows that the free energy of the TSA, with all ligands bound, is lower by only about 8.9 kJ/mol than that of the Michaelis or apo complex conformations with the TSA ligands present.


Asunto(s)
Arginina Quinasa/metabolismo , Biocatálisis , Animales , Arginina Quinasa/química , Cangrejos Herradura/enzimología , Modelos Moleculares , Resonancia Magnética Nuclear Biomolecular
20.
J Virol ; 91(5)2017 03 01.
Artículo en Inglés | MEDLINE | ID: mdl-28031362

RESUMEN

Many types of small GTPases are widely expressed in eukaryotes and have different functions. As a crucial member of the Rho GTPase family, Cdc42 serves a number of functions, such as regulating cell growth, migration, and cell movement. Several RNA viruses employ Cdc42-hijacking tactics in their target cell entry processes. However, the function of Cdc42 in shrimp antiviral immunity is not clear. In this study, we identified a Cdc42 protein in the kuruma shrimp (Marsupenaeus japonicus) and named it MjCdc42. MjCdc42 was upregulated in shrimp challenged by white spot syndrome virus (WSSV). The knockdown of MjCdc42 and injection of Cdc42 inhibitors increased the proliferation of WSSV. Further experiments determined that MjCdc42 interacted with an arginine kinase (MjAK). By analyzing the binding activity and enzyme activity of MjAK and its mutant, ΔMjAK, we found that MjAK could enhance the replication of WSSV in shrimp. MjAK interacted with the envelope protein VP26 of WSSV. An inhibitor of AK activity, quercetin, could impair the function of MjAK in WSSV replication. Further study demonstrated that the binding of MjCdc42 and MjAK depends on Cys271 of MjAK and suppresses the WSSV replication-promoting effect of MjAK. By interacting with the active site of MjAK and suppressing its enzyme activity, MjCdc42 inhibits WSSV replication in shrimp. Our results demonstrate a new function of Cdc42 in the cellular defense against viral infection in addition to the regulation of actin and phagocytosis, which has been reported in previous studies. IMPORTANCE The interaction of Cdc42 with arginine kinase plays a crucial role in the host defense against WSSV infection. This study identifies a new mechanism of Cdc42 in innate immunity and enriches the knowledge of the antiviral innate immunity of invertebrates.


Asunto(s)
Arginina Quinasa/metabolismo , Proteínas de Artrópodos/metabolismo , Penaeidae/virología , Replicación Viral , Virus del Síndrome de la Mancha Blanca 1/fisiología , Proteína de Unión al GTP cdc42/metabolismo , Secuencia de Aminoácidos , Animales , Arginina Quinasa/química , Proteínas de Artrópodos/química , Secuencia Conservada , Inducción Enzimática/inmunología , Escherichia coli , Interacciones Huésped-Patógeno , Inmunidad Innata , Simulación del Acoplamiento Molecular , Penaeidae/enzimología , Penaeidae/inmunología , Unión Proteica , Mapas de Interacción de Proteínas , Regulación hacia Arriba , Proteína de Unión al GTP cdc42/química
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