RESUMEN
In a parasitological survey of fishes from Moreton Bay (southeastern Queensland, Australia), 169 teleost fishes, representing 54 species from 28 families, were examined for larval cestodes. Of these 54 species, 36 were found to be infected by metacestodes. Metacestodes were characterised by morphological and molecular data (the D1-D3 region of the 28S rDNA gene); these data were analysed in parallel to inform larval type allocation. Metacestodes collected represented eight morphological types, seven previously reported (Types I, II, IV, V, VI, VII, and X) and one novel type (Type XVI). Phylogenetic analyses were conducted to genetically match larval types to adult cestodes. Six of the eight larval types found were matched to adult forms: Type I metacestodes matched species of Phoreiobothrium Linton, 1889 (Onchobothriidae); Type II metacestodes matched species of Acanthobothrium van Beneden, 1849 (Onchobothriidae); Type IV metacestodes matched species of Scyphophyllidium Woodland, 1927 and Alexandercestus Ruhnke & Workman, 2013 (Phyllobothriidae); Type VI metacestodes matched species of Anthobothrium van Beneden, 1850 (Tetraphyllidea incertae sedis); Type X metacestodes matched species of Ambitalveolus Caira & Jensen, 2022 (Tetraphyllidea incertae sedis); and Type XVI metacestodes matched species of Platybothrium Linton, 1890 (Onchobothriidae). Based on phylogenetic topology, Type V metacestodes are inferred to match Pedibothrium Linton, 1909 (Balanobothriidae) and Type VII metacestodes are inferred to match Spongiobothrium Linton, 1889 (Rhinebothriidae). These findings support and extend the unified morphological type system proposed previously, but suggest that morphological types will ultimately be informative to identify metacestodes to a group of related genera rather than any distinct genus.
Asunto(s)
Bahías , Cestodos , Peces , Filogenia , ARN Ribosómico 28S , Animales , Peces/parasitología , Cestodos/clasificación , Cestodos/genética , Cestodos/anatomía & histología , ARN Ribosómico 28S/genética , Queensland , Especificidad de la Especie , Larva/clasificación , Larva/anatomía & histología , ADN Ribosómico/genéticaRESUMEN
The present study aims at clarifying the poorly known phylogenetic relationships and systematics of cestodes of the family Davaineidae Braun, 1900 (Cyclophyllidea), primarily the genus Raillietina Fuhrmann, 1920 and of the subfamily Inermicapsiferinae (Anoplocephalidae) from mammals (mostly rodents, 31 new isolates) and birds (eight new isolates). Phylogenetic analyses are based on sequences of the large subunit ribosomal RNA gene (28S) and mitochondrial NADH dehydrogenase subunit 1 gene (nad1). The main phylogenetic pattern emerging from the present analysis is the presence of three independent lineages within the main clade of the subfamily Davaineinae, one of which is almost entirely confined to species from rodents and the other two show a mixture of species from birds and mammals. It is suggested that the major diversification of the main clade took place in birds, possibly in galliforms. The subsequent diversification included repeated host shifts from birds to mammals and to other birds, and from rodents to other mammals, showing that colonisation of new host lineages has been the main driver in the diversification of davaineine cestodes. It is also shown that all isolates of Inermicapsifer Janicki, 1910, mainly from rodents, form a monophyletic group positioned among Raillietina spp. in the "rodent lineage", indicating that the genus Inermicapsifer is a member of the family Davaineidae. This means that the subfamily Inermicapsiferinae and the family Inermicapsiferidae should be treated as synonyms of the Davaineidae, specifically the subfamily Davaineinae. Three additional genera generally included in the Inermicapsiferinae, i.e. Metacapsifer Spasskii, 1951, Pericapsifer Spasskii, 1951 and Thysanotaenia Beddard, 1911, are also assigned here to the Davaineidae (subfamily Davaineinae). Raillietina spp. were present in all three main lineages and appeared as multiple independent sublineages from bird and mammalian hosts, verifying the non-monophyly of the genus Raillietina and suggesting a presence of multiple new species and genera.
Asunto(s)
Cestodos , Infecciones por Cestodos , Filogenia , Roedores , Animales , Cestodos/clasificación , Cestodos/genética , Roedores/parasitología , Infecciones por Cestodos/veterinaria , Infecciones por Cestodos/parasitología , Aves , ARN Ribosómico 28S/genética , ARN Ribosómico 28S/análisis , NADH Deshidrogenasa/genéticaRESUMEN
This study investigated the prevalence, morphology, molecular identification, and histopathological effects of larval tapeworms (plerocercoids) infecting the skeletal muscles of the Indian halibut (Psettodes erumei) collected from the coastal waters of the Arabian Gulf. Numerous oval or round blastocysts, measuring 13-26 mm, were found embedded within the muscular tissues of the Indian halibut, rendering the fish unsuitable for human consumption. Morphological and molecular analyses identified the plerocercoids as Dasyrhynchus giganteus (family Dasyrhynchidae), with an overall prevalence of 15.4%. The seasonal prevalence was the highest in summer (14.6%), followed by spring (10.6%), winter (4.4%), and autumn (3.5%). Infection rates increased with fish size. Histopathological examination revealed fibrous connective tissue capsules surrounding the larvae, causing muscular atrophy and degenerative changes, with few inflammatory eosinophilic cells. Molecular and phylogenetic analysis of the 28S rDNA gene sequences confirmed the specimens as D. giganteus, clustered closely with other sequences of D. giganteus with 100% bootstrap values. This study provided valuable insights into the parasitic infection dynamics, seasonal variation, molecular identification, and histopathological effects, highlighting the importance of monitoring fish for food safety and public health implications.
Asunto(s)
Cestodos , Infecciones por Cestodos , Enfermedades de los Peces , Filogenia , Estaciones del Año , Animales , Enfermedades de los Peces/parasitología , Enfermedades de los Peces/epidemiología , Enfermedades de los Peces/patología , Prevalencia , Cestodos/genética , Cestodos/clasificación , Infecciones por Cestodos/veterinaria , Infecciones por Cestodos/epidemiología , Infecciones por Cestodos/patología , Infecciones por Cestodos/parasitología , Lenguado/parasitología , Músculo Esquelético/parasitología , Músculo Esquelético/patología , ARN Ribosómico 28S/genéticaRESUMEN
A comparative analysis of taxonomic diversity on shrew cestodes among four islands in the Sea of Japan and the Sea of Okhotsk (Sakhalin, Kunashir, Hokkaido, and Moneron) was performed. Cestode species shared among the islands were identified and their host specificity was investigated. On Sakhalin Island, 33 species of the families Hymenolepididae, Dilepididae and Mesocestoididae were recorded in four shrew species (Sorex caecutiens, S. gracillimus, S. minutissimus and S. unguiculatus). In S. caecutiens, S. gracillimus, and S. unguiculatus on Kunashir Island, 22 species of the same families were found and, on Hokkaido Island, 23 species of the families Hymenolepididae and Dilepididae were recorded. On Moneron Island, three species of cestodes were registered in S. tundrensis. The Sakhalin-Hokkaido-Kunashir complex of shrew cestodes includes eastern-Palearctic, trans-Palearctic and endemic species. High endemism (~22%) of shrew tapeworms in the Sakhalin-Kunashir-Hokkaido Islands was noted as compared to continental territories. The different numbers of cestode species in S. unguiculatus (31), S. caecutiens (29), S. gracillimus (19) and S. minutissimus (1) were found. It was concluded that the cestodes species diversity of shrews of Sakhalin-Kunashir-Hokkaido depended primarily on the history of island formation, their modern physical and geographical features, the abundance of definitive and intermediate cestodes hosts and, to a lesser extent, on the size and remoteness of the islands from the mainland and the diversity of host species.
Asunto(s)
Biodiversidad , Cestodos , Especificidad del Huésped , Islas , Musarañas , Animales , Cestodos/clasificación , Cestodos/aislamiento & purificación , Cestodos/genética , Musarañas/parasitología , Japón , Infecciones por Cestodos/veterinaria , Infecciones por Cestodos/parasitología , Infecciones por Cestodos/epidemiologíaRESUMEN
Diphyllobothriosis, a fish-borne zoonosis in South America, is mainly caused by the Pacific broad tapeworm Adenocephalus pacificus Nybelin, 1931, a parasite of considerable concern in fishery resources due to its impact on public health. A new diphyllobothrid, Diphyllobothrium sprakeri Hernández-Orts et al. Parasites Vectors 14:219, 2021, was recently described from sea lions from the Pacific Coast, but marine fish acting as intermediate hosts are unknown. The objective of this study was to confirm the presence of plerocercoid larvae of Diphyllobothriidae Lühe, 1910 (Cestoda: Diphyllobothriidea) in nine fish species of commercial importance in Peru. Of a total of 6999 fish (5861 Engraulis ringens, 853 Sciaena deliciosa, 6 Sciaena callaensis, 171 Scomber japonicus, 40 Trachurus murphyi, 40 Ariopsis seemanni, 18 Merluccius peruanus, 5 Sarda chiliensis, and 5 Coryphaena hippurus), 183 were infected with plerocercoid larvae, representing a total prevalence of 2.61% and a mean intensity of 3.2. Based on mtDNA cox1 sequences of 43 plerocercoids, a phylogenetic analysis revealed that 41 belong to A. pacificus and two to D. sprakeri. These findings are first molecular data for D. sprakeri larvae, and the infections of E. ringens and T. murphyi by plerocercoid larvae represent the first records of intermediate/paratenic hosts for this species. Hence, the findings of the current study enhance our understanding of the presence of diphyllobothriid species in commercial fish from the Southeastern Pacific Ocean and their potential impact on seafood safety for local human populations.
Asunto(s)
Enfermedades de los Peces , Peces , Larva , Animales , Perú/epidemiología , Enfermedades de los Peces/parasitología , Enfermedades de los Peces/epidemiología , Peces/parasitología , Prevalencia , Larva/clasificación , Larva/crecimiento & desarrollo , Larva/genética , Filogenia , Infecciones por Cestodos/veterinaria , Infecciones por Cestodos/parasitología , Infecciones por Cestodos/epidemiología , Cestodos/genética , Cestodos/clasificación , Cestodos/aislamiento & purificación , Diphyllobothrium/genética , Diphyllobothrium/clasificación , Diphyllobothrium/aislamiento & purificación , Difilobotriosis/epidemiología , Difilobotriosis/parasitología , Difilobotriosis/veterinaria , ADN de Helmintos/genéticaRESUMEN
Despite the importance of the electric catfish (Malapterurus electricus) and the African giant catfish (Heterobranchus bidorsalis) in the foodweb of Lake Nasser, Egypt, little is known about their diseases and parasitic fauna. This work describes, for the first time, cestodiasis in M. electricus and H. bidorsalis. Corallobothrium solidum and Proteocephalus sp. were identified morphologically and molecularly from M. electricus and H. bidorsalis, respectively. Using PCR, sequencing, and phylogenetic analysis, the two cestodes shared rRNA gene sequence similarities yet were unique and the two new sequences for the proteocephalid genera were submitted to the GenBank database. The prevalence of infection was 75% and 40% for the two fish species, respectively. Infections significantly increased in the summer and spring and were higher in female fish than in male fish. The intestine was the preferred site of the two adult cestodes. However, in the case of C. solidum some larval cestodes were found outside the intestine in between the skin and abdominal musculature, attached to the mesentery, and within intestinal tunica muscularis. Desquamation of the intestinal epithelium and inflammation at the site of infection in addition to congestion of the intestinal wall of the tapeworm infected fish were evident, indicating that C. solidum and Proteocephalus sp. impacted the infected fish. The larval stages of C. solidum attempted to penetrate the intestine and sometimes they were encircled within fibrous layers infiltrated with inflammatory cells. The infected fish's musculature was free of cestode infections. Preventive measures should be implemented to prevent the spread of infections.
Asunto(s)
Bagres , Cestodos , Infecciones por Cestodos , Enfermedades de los Peces , Lagos , Filogenia , Animales , Enfermedades de los Peces/parasitología , Enfermedades de los Peces/epidemiología , Cestodos/genética , Cestodos/clasificación , Cestodos/aislamiento & purificación , Egipto/epidemiología , Infecciones por Cestodos/veterinaria , Infecciones por Cestodos/epidemiología , Infecciones por Cestodos/parasitología , Bagres/parasitología , Femenino , MasculinoRESUMEN
The rhinebothriidean tapeworm family Escherbothriidae has recently been expanded to include the genus Ivanovcestus , species of which parasitise arhynchobatid skates. Similarities in morphology and host associations between Ivanovcestus and Semiorbiseptum - a genus yet to be assigned to one of the families in the order Rhinebothriidea - led us to explore the possibility that Semiorbiseptum might also belong in the Escherbothriidae. Morphological similarities with Scalithrium ivanovae , Scalithrium kirchneri and Rhinebothrium scobinae , all of which also parasitise arhynchobatid skates, raised questions regarding the generic placements of these species. In addition, new collections from the skate Sympterygia brevicaudata revealed two new species that morphologically resemble species of Ivanovcestus . A combination of morphological and molecular data were used to assess the generic placement of the newly discovered species and refine our understanding of the membership of the family Escherbothriidae. Sequence data for the D1-D3 region of the 28S rDNA gene were generated de novo for 14 specimens of 7 rhinebothriidean species and combined with comparable published data to represent all 6 families in the Rhinebothriidea in the analysis. The phylogenetic tree resulting from maximum likelihood analysis strongly supports the inclusion of the genus Semiorbiseptum in the family Escherbothriidae. Our work also suggests that the skate-hosted species previously assigned to Scalithrium and Rhinebothrium are also members of Semiorbiseptum and that Ivanovcestus is a junior synonym of Semiorbiseptum . Six species are transferred to Semiorbiseptum , bringing the total number of species in the genus to ten. The diagnosis of Semiorbiseptum is amended to accommodate the additional species. A second species in the previously monotypic type genus of the family, Escherbothrium , is described. The diagnosis of the Escherbothriidae is amended to include the new and transferred species. This study underscores the importance of integrating morphological and molecular data in bringing resolution to cestode systematics. We believe our findings provide a robust foundation for future research into the evolutionary history and host associations of cestodes within the order Rhinebothriidea and beyond. These also highlight the importance of expanding our understanding of skate-hosted cestodes. ZooBank: urn:lsid:zoobank.org:pub:8052AFCA-5FBD-4430-95F4-0E5E368DEA3D.
Asunto(s)
Cestodos , Filogenia , Rajidae , Cestodos/genética , Cestodos/clasificación , Animales , Rajidae/parasitología , Especificidad de la Especie , ARN Ribosómico 28S/genéticaRESUMEN
Currently comprising 12 species infecting the gastrointestinal tracts of diurnal raptors (Falconiformes, Accipitriformes), species of Cladotaenia are diagnosed by their branching uterus, testes in two fields reaching the same level anteriorly, and small rostellum armed with taenioid hooks arranged in two rows. In this study we describe a new species of Cladotaenia recovered from a number of Australasian harriers Circus approximans, from the southern half of South Island, New Zealand. The new species is distinguished from other species by its single circle of hooks. It is closest, morphologically, to C. circi, but differs in the shape of the terminal proglottids and the number of uterine branches. Sequences of 28S and cox1 gene are presented. Genetically, Cladotaenia anomala n. sp. is closest to Cladotaenia globifera but differs morphologically in the size of the suckers, testes and eggs. This description constitutes the first record of a Cladotaenia species in New Zealand. We discuss some potential routes this parasite may have taken to arrive in New Zealand.
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Cestodos , Escarabajos , Parásitos , Animales , Femenino , Nueva Zelanda , Especificidad de la Especie , Cestodos/genética , AvesRESUMEN
Evidence that the innate immune system can respond with forms of memory upon reinfection has been accumulating over the past few years. These phenomena of "immune priming" in invertebrates, and "trained immunity" in vertebrates, are contrary to previous belief that immune memory and specificity are restricted to the adaptive immune system. However, while trained immunity is usually a response with rather low specificity, immune priming has shown highly specific responses in certain species. To date, it is largely unknown how specificity in innate immune memory can be achieved in response to different parasite types. Here, we revisited a system where an exceptionally high degree of innate immune specificity had been demonstrated for the first time, consisting of the copepod Macrocyclops albidus and its natural parasite, the tapeworm Schistocephalus solidus. Using homologous (same family) vs. heterologous (different family) priming-challenge experiments, we first confirm that copepods exposed to the same parasite family benefit from reduced secondary infections. We further focused on exposed-but-not-infected copepods in primary exposure to employ a transcriptomic approach, distinguishing between immunity that was either specific or unspecific regarding the discrimination between tapeworm types. A weighted gene co-expression network (WGCN) revealed differences between specific and unspecific immunity; while both involved histone modification regulation, specific immunity involved gene-splicing factors, whereas unspecific immunity was primarily involved in metabolic shift. We found a functional enrichment in spliceosome in specific immunity, whereas oxidative phosphorylation and carbon metabolism were enriched in unspecific immunity. Our findings allow discrimination of specific and unspecific components of an innate immune memory, based on gene expression networks, and deepen our understanding of basic aspects of immune systems.
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Cestodos , Infecciones por Cestodos , Copépodos , Parásitos , Animales , Inmunidad Entrenada , Interacciones Huésped-Parásitos , Cestodos/genética , Infecciones por Cestodos/parasitología , Memoria InmunológicaRESUMEN
Detection of intestinal parasites in fish typically requires autopsy, resulting in the sacrifice of the fish. Here, we describe a non-lethal method for detecting the tapeworm Eubothrium crassum in fish using anal swabs and real-time PCR detection. Two assays were developed to detect cytochrome oxidase I (COI) mitochondrial DNA and 18S ribosomal DNA sequences of E. crassum, respectively. The assays were tested on swab samples from confirmed pathogen free Atlantic salmon (Salmo salar L.) and on samples from farmed Atlantic salmon, where the presence and intensity of parasites had been established through autopsy. The COI assay was shown to be specific to E. crassum, while the 18S assay also amplified the closely related E. salvelini, a species infecting Arctic charr (Salvelinus alpinus L.) in freshwater. The COI assay detected E. crassum in all field samples regardless of parasite load while the 18S assay failed to detect the parasite in two samples. The results thus demonstrates that this non-lethal approach can effectively detect E. crassum and can be a valuable tool in assessing the prevalence of infection in farmed salmon, aiding in treatment decisions and evaluating treatment effectiveness.
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Cestodos , Infecciones por Cestodos , Enfermedades de los Peces , Salmo salar , Animales , Salmo salar/genética , Reacción en Cadena en Tiempo Real de la Polimerasa/veterinaria , Enfermedades de los Peces/diagnóstico , Enfermedades de los Peces/parasitología , Cestodos/genética , Infecciones por Cestodos/diagnóstico , Infecciones por Cestodos/veterinaria , Infecciones por Cestodos/parasitología , Trucha/parasitologíaRESUMEN
The most common equine tapeworm, Anoplocephala perfoliata, has often been neglected amongst molecular investigations and has been faced with limited treatment options. However, the recent release of a transcriptome dataset has now provided opportunities for in-depth analysis of A. perfoliata protein expression. Here, global, and sub-proteomic approaches were utilized to provide a comprehensive characterization of the A. perfoliata soluble glutathione transferases (GST) (ApGST). Utilizing both bioinformatics and gel-based proteomics, GeLC and 2D-SDS PAGE, the A. perfoliata 'GST-ome' was observed to be dominated with Mu class GST representatives. In addition, both Sigma and Omega class GSTs were identified, albeit to a lesser extent and absent from affinity chromatography approaches. Moreover, 51 ApGSTs were localized across somatic (47 GSTs), extracellular vesicles (EVs) (Whole: 1 GST, Surface: 2 GSTs) and EV depleted excretory secretory product (ESP) (9 GSTs) proteomes. In related helminths, GSTs have shown promise as novel anthelmintic or vaccine targets for improved helminth control. Thus, provides potential targets for understanding A. perfoliata novel infection mechanisms, hostparasite relationships and anthelmintic treatments.
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Antihelmínticos , Cestodos , Infecciones por Cestodos , Animales , Caballos , Glutatión Transferasa/genética , Glutatión Transferasa/metabolismo , Proteómica , Infecciones por Cestodos/veterinaria , Cestodos/genéticaRESUMEN
Ligula intestinalis (Cestoda: Diphyllobothriidae) is an emerging model organism for studies on parasite population biology and host-parasite interactions. However, a well-resolved genome and catalogue of its gene content has not been previously developed. Here, we present the first genome assembly of L. intestinalis, based on Oxford Nanopore Technologies, Illumina and Omni-C sequencing methodologies. We use transcriptome profiling to compare plerocercoid larvae and adult worms and identify differentially expressed genes (DEGs) associated with these life stages. The genome assembly is 775.3 mega (M)bp in size, with scaffold N50 value of 118 Mbp and encodes 27 256 predicted protein-coding sequences. Over 60% of the genome consists of repetitive sequences. Synteny analyses showed that the 10 largest scaffolds representing 75% of the genome display high correspondence to full chromosomes of cyclophyllidean tapeworms. Mapping RNA-seq data to the new reference genome, we identified 3922 differentially expressed genes in adults compared with plerocercoids. Gene ontology analyses revealed over-represented genes involved in reproductive development of the adult stage (e.g. sperm production) and significantly enriched DEGs associated with immune evasion of plerocercoids in their fish host. This study provides the first insights into the molecular biology of L. intestinalis and provides the most highly contiguous assembly to date of a diphyllobothriid tapeworm useful for population and comparative genomic investigations of parasitic flatworms.
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Cestodos , Infecciones por Cestodos , Animales , Masculino , Semen , Cestodos/genética , Infecciones por Cestodos/parasitología , Peces/genética , Perfilación de la Expresión Génica , TranscriptomaRESUMEN
This paper provides new morphological and molecular data for identifying Monoecocestus species from rodents: a) morphological update of Monoecocestus spp., b) morphological data on Anoplocephalidae taxa from Sigmodontinae rodents, c) analyses of the genetic distances between the specimens studied and other Anoplocephalidae from rodents available in GenBank, and phylogenetic inferences. A total of 25 specimens of Holochilus spp. were examined from four provinces of Argentina. Cestodes specimens were removed from the rodents small intestines. Conventional studies were used for the morphological and molecular analysis. Four taxa of Monoecocestus were identified. Monoecocestus threlkeldi was identified as first record in Holochilus chacarius and from Argentina. Molecular and morphological aspects of Monoecocestus sp.1, Monoecocestus sp.2 and Monoecocestus sp.3 were described. Specimens belonging to the genus Monoecocestus may represent closely related species, demonstrating the importance of using integrative taxonomic approaches to understand biological diversity. The continuity of the studies on Anoplocephalidae will allows to advance in investigation of molecular analyses and ecological aspects that determine parasite-host-environment relationship.
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Cestodos , Infecciones por Cestodos , Enfermedades de los Roedores , Animales , Roedores/genética , Sigmodontinae/genética , Filogenia , Cestodos/genética , Cestodos/anatomía & histologíaRESUMEN
Las infecciones causadas por parásitos del tracto digestivo humano representan un problema de salud pública global. En países industrializados, sus particulares características epidemiológicas (baja prevalencia general de enteroparásitos), económicas (elevados costes laborales) y clínicas (incremento constante del número de muestras y determinaciones diagnósticas a realizar) han causado que las técnicas moleculares estén progresivamente reemplazando a la microscopía convencional como método de diagnóstico de primera línea de estos patógenos en el laboratorio clínico moderno. Los métodos basados en PCR, particularmente los desarrollados para la detección simultánea de varios agentes que causan la misma etiología (diagnóstico sindrómico), representan ya una opción coste-efectiva que permite automatizar procesos, optimizar flujos de trabajo, comparar resultados entre diferentes laboratorios y facilitar la acreditación de procedimientos diagnósticos. En esta revisión se detalla de forma clara y concisa el estado actual del diagnóstico molecular de las principales especies de parásitos intestinales humanos, particularmente de los protozoos entéricos causantes de diarrea (Cryptosporidium spp., Giardia duodenalis, Entamoeba histolytica), de los miembros más destacados de los filos Microsporidia (Enterocytozoon bieneusi) y Stramenopiles (Blastocystis sp.), así como de los helmintos transmitidos por suelo (Ancylostoma spp., Ascaris lumbricoides, Necator americanus, Strongyloides stercoralis y Trichuris trichiura) y alimentos (Anisakis spp., Clonorchis sinensis, Fasciola spp., Taenia solium, y Trichinella spiralis). Especial atención se ha prestado a la descripción de técnicas y formatos disponibles, a sus prestaciones diagnósticas y a los marcadores genéticos más usados, tanto para la detección en laboratorios clínicos como para el genotipado en centros de referencia e investigación
Infections causes by parasites of the gastrointestinal tract are a global public health problem. In industrialised countries, their particular epidemiological (low general prevalence of enteroparasites), economic (high labour costs) and clinical characteristics (constant increase in the number of samples and diagnostic determinations to be performed) have led molecular techniques to progressively replace conventional microscopy as the first-line diagnostic method of these pathogens in modern clinical laboratories. PCR-based techniques, particularly those developed for the simultaneous detection of the various agents that can cause the same infectious disease (syndromic diagnosis), already represent a cost-effective option that allow process automisation, workflow optimisation, and comparison of results among different laboratories, and facilitate accreditation of diagnostic procedures. This review clearly and concisely discusses the current situation of the molecular diagnosis of the main species of intestinal parasites in humans, particularly the enteric protozoans causing diarrhoea (Cryptosporidium spp., Giardia duodenalis, Entamoeba histolytica), the most important members the Microsporidia phyla (Enterocytozoon bieneusi) and Stramenopiles phyla (Blastocystis sp.), as well as the helminths transmitted by soil (Ancylostoma spp., Ascaris lumbricoides, Necator americanus, Strongyloides stercoralis and Trichuris trichiura) and food (Anisakis spp., Clonorchis sinensis, Fasciola spp., Taenia solium, and Trichinella spiralis). Special attention is paid to the description of available techniques and formats, to their diagnostic benefits and the most widely used genetic markers for their detection, both in clinical laboratories and genotyping in referral and research centres
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Humanos , Parasitosis Intestinales/diagnóstico , Marcadores Genéticos , Reacción en Cadena de la Polimerasa/clasificación , Parásitos/genética , Parásitos/clasificación , Sensibilidad y Especificidad , Helmintos/clasificación , Helmintos/genética , Amebozoos/genética , Cestodos/genéticaRESUMEN
Abstract Forty specimens of the Narrowstripe cardinal fish Apogon exostigma were examined for gastrointestinal helminthes, and 62.5% were infected with a new trypanorhynchid larval cestode parasite. The morphology of its larval stage was studied based on light and scanning electron microscopy. The data revealed plerocercoid larvae characterized by a pyriform body lined with prominent microtriches; the acraspedote scolex had four overlapping bothridia; four tentacles protruded through the pars bothridialis; the armature of the tentacles was homeocanthous, homeomorphous, and consisted of falcate compact rose-thorn-shaped tentacular hooks; four oval-shaped bulbs in pars bulbosa; and short appendix at terminal end of the body. Molecular analysis of the 18S rRNA sequences verified the taxonomy of this parasite and supported its morphology. We discovered that there was a close identity (up to 87%) with alternative species obtained for comparison from GenBank. The data also showed that there were high blast scores and low divergence values between this parasite and other Tentaculariidae species. The phyletic analysis showed that parasite sequences in conjunction with existing data places this trypanorhynchid species among the Tentaculariidae. This species is deeply embedded within genus Nybelinia with close relationships to Nybelinia queenslandensis as a putative sister taxon.
Resumo Quarenta espécimes do peixe cardinal Apogon exostigma da Narrowstripe foram examinados para identificar helmintos gastrointestinais, destes 62,5% foram infectados com um novo parasito larval cestóide tripanorrinquídeo. A morfologia de seu estágio larval foi estudada na microscopia de luz e eletrônica de varredura. Os dados revelaram larvas plerocercoides caracterizadas por uma forma piriforme com um corpo revestido por microtrícinos proeminentes; o escolex acraspedótico tinha quatro sobreposições; quatro tentáculos se projetavam através da pars botridialis; a armadura dos tentáculos era homeocante, homeomorfa e consistia de ganchos tentaculares em forma de espinhos, em forma de falcão; quatro bulbos ovais em pars bulbosa; e apêndice curto na extremidade terminal do corpo. A análise molecular das sequências de RNAr 18S verificou a taxonomia desse parasita e apoiou sua morfologia. Descobrimos que havia uma identidade próxima (até 87%) com espécies alternativas obtidas para comparação do GenBank. Os dados também mostraram que houve altos escores de brusone e baixos valores de divergência entre este parasita e outras espécies de Tentaculariidae. A análise filética mostrou que as sequências de parasitas em conjunto com os dados existentes colocam esta espécie de tripanorimidídeo entre os Tentaculariidae. Esta espécie está profundamente enraizada no gênero Nybelinia, tendo relações próximas com Nybelinia queenslandensis como um putativo táxon irmão.