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1.
J Food Sci ; 89(5): 2909-2920, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38551034

RESUMEN

The accurate detection of biogenic amines (BAs) is an important means of ensuring the quality and safety of cephalopod seafood products. In this study, the pre-column derivatization of high-performance liquid chromatography (HPLC) was optimized using dansyl chloride (Dns-Cl) to detect BAs in octopus, cuttlefish, and squid. The reasons for the formation of BAs were investigated by assessing their decarboxylase activity and the rates of decomposition. The findings demonstrated that using Dns-Cl to optimize pre-column derivatization enabled the separation of nine different BAs. The detection limits ranged from 0.07 to 0.25 mg/L, and the results exhibited a high level of linearity (R2 ≥ 0.997). The decarboxylase activity and biodegradation rate positively correlated with the formation of BAs at temperatures below 0°C. Notably, the decarboxylase activity of octopus, cuttlefish, and squid exhibited a significant increase with prolonged storage time, and formyltransferase and carbamate kinase may be the key decarboxylase in cephalopod products. These findings serve as a valuable reference for further investigations into the mechanisms behind BAs production and the development of control technologies for BAs in cephalopod products. This study has successfully demonstrated the effectiveness of the Dns-Cl pre-column derivatization-HPLC method in accurately and efficiently detecting BAs in octopus, cuttlefish, and squid. Moreover, it highlights the influence of decarboxylase content and biodegradation rate on the formation of BAs. Importantly, this method can serve as a reference for detecting BAs in various seafood products.


Asunto(s)
Aminas Biogénicas , Cefalópodos , Compuestos de Dansilo , Alimentos Marinos , Animales , Cromatografía Líquida de Alta Presión/métodos , Compuestos de Dansilo/química , Cefalópodos/química , Aminas Biogénicas/análisis , Alimentos Marinos/análisis , Decapodiformes/química , Límite de Detección , Carboxiliasas/metabolismo
2.
Biochim Biophys Acta Gen Subj ; 1867(9): 130427, 2023 09.
Artículo en Inglés | MEDLINE | ID: mdl-37454915

RESUMEN

BACKGROUND & AIMS: Transport functions of albumin are of clinical and pharmacological interest and are determined by albumin's properties like posttranslational modifications or bound ligands. Both are affected in pathological conditions and in therapeutic grade albumin solutions. The term effective albumin concentration was introduced as a measure of functionally intact albumin. Our aim was to evaluate the impact of ligands and modifications with different approaches as a measure of effective albumin. APPROACH & RESULTS: We used a spin labelled fatty acid and dansylsarcosine to characterize binding properties of albumin i) prepared from plasma of patients and healthy control donors, ii) measured directly out of plasma, iii) research grade albumin, iv) in vitro modified albumin, and v) therapeutic infusion solutions before and after removal of stabilizers. Bilirubin is the main determinant for binding function in patients' albumin. In in vitro prepared albumin bound fatty acids correlated with impaired binding. Human nonmercaptalbumin1, not human nonmercaptalbumin2, showed reduced binding properties. Binding and transport function of therapeutic albumin was severely impaired and restored by filtration. Glycation of research grade albumin had no effect on the binding of dansylsarcosine and only a minor effect on fatty acid binding. CONCLUSIONS: Our results suggest that effective albumin -in terms of binding properties- is primarily determined by bound ligands and only to a minor extent by posttranslational modifications. Characterizing albumin directly from plasma better reflects the physiological situation whereas in the case of therapeutic grade albumin stabilizers should be removed to make its binding properties accessible.


Asunto(s)
Albúminas , Ácidos Grasos , Humanos , Ligandos , Albúminas/metabolismo , Compuestos de Dansilo/química , Compuestos de Dansilo/metabolismo
3.
Anal Chim Acta ; 1272: 341467, 2023 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-37355326

RESUMEN

Liquid chromatography mass spectrometry (LC-MS) has been increasingly used for metabolome analysis. One of the critical steps in the LC-MS metabolome analysis workflow is related to metabolite identification. Among the measured parameters, peak mass is commonly used to search against a database for potential metabolite matches. Higher accuracy mass measurement allows the use of a narrower mass tolerance window for mass search. While various types of mass analyzers can routinely measure a peak mass with an error of less than a few ppm, mass measurement accuracy is not uniform for peaks with different intensities, particularly for quadrupole time-of-flight (QTOF) MS. Herein we present a simple and convenient method to determine the relation between peak intensity and mass error in LC-QTOF-MS-based metabolome analysis, followed by intensity-dependent mass search (IDMS) of a database for metabolite matches. This method is based on running a series of sodium formate mass calibrants, as part of the standard operating procedure (SOP) in LC-MS data acquisition, and then curve-fitting the measured mass errors and peak intensities. We show that, in two different quadrupole time-of-flight (QTOF) mass analyzers, mass accuracy is generally reduced as peak intensity decreases, which is independent of m/z values in the range commonly used for metabolite detection (e.g., m/z < 1000). We demonstrate the improvement in metabolite matches using IDMS in the analyses of dansyl labeled standards and human urine samples. We have implemented the IDMS method in the freely available MCID database at www.mycompoundid.org, which is composed of 8021 known human endogenous metabolites and their predicted metabolic products (375,809 compounds from one metabolic reaction and 10,583,901 compounds from two reactions).


Asunto(s)
Metaboloma , Metabolómica , Humanos , Marcaje Isotópico/métodos , Compuestos de Dansilo/química , Metabolómica/métodos , Cromatografía Liquida/métodos , Espectrometría de Masas/métodos
4.
J Chromatogr A ; 1705: 464167, 2023 Aug 30.
Artículo en Inglés | MEDLINE | ID: mdl-37348224

RESUMEN

Herein, a standalone software equipped with a graphic user interface (GUI) is developed to predict liquid chromatography mass spectrometry (LC-MS) retention times (RTs) of dansylated metabolites. Dansylation metabolomics strategy developed by Li et al. narrows down a vast chemical space of metabolites into the metabolites containing amines and phenolic hydroxyls. Combined with differential isotope labeling, e.g., 12C-reagent labeled individual samples spiked with a 13C-reagent labeled reference or pooled sample, LC-MS analysis of the dansylated samples enables accurate relative quantification of all labeled metabolites. Herein, the LC-RTs for dansylated metabolites are predicted using an artificial neural network (ANN) machine-learning model. For the ANN modeling, 315 dansylated urine metabolites obtained from the DnsID database are used. The ANN LC-RT prediction model was reliable, with a mean absolute deviation of 0.74 min for the 30 min LC run. In the RT model, a deviation of more than 2 min was observed in only 3.2% of the total 315 metabolites, while a deviation of 1.5 min or more was observed in 11% of the metabolites. Furthermore, it was found that the LC-RT prediction was also reliable even for metabolites containing both amine and phenolic functional groups that can undergo dansylation on either one of the two functional groups, resulting in the generation of two isomeric forms. This RT-prediction model is embedded into a user-friendly GUI and can be used for identifying nontargeted dansylated metabolites with unknown RTs, along with accurate mass measurements. Furthermore, it is demonstrated that the developed software can help identify metabolites from a urine sample of an anonymous healthy pregnant woman.


Asunto(s)
Metaboloma , Metabolómica , Humanos , Femenino , Compuestos de Dansilo/química , Cromatografía Liquida/métodos , Metabolómica/métodos , Espectrometría de Masas/métodos , Aminas/orina , Fenoles , Marcaje Isotópico
5.
Anal Chem ; 95(16): 6629-6636, 2023 04 25.
Artículo en Inglés | MEDLINE | ID: mdl-37039432

RESUMEN

Dipeptides have recently attracted considerable attention due to their newly found biological functions and potential biomarkers of diseases. Global analysis of dipeptides (400 common dipeptides in total number) in samples of complex matrices would enable functional studies of dipeptides and biomarker discovery. In this work, we report a method for high-coverage detection and accurate relative quantification of dipeptides. This method is based on differential chemical isotope labeling (CIL) of dipeptides with dansylation and liquid chromatography Orbitrap tandem mass spectrometry (LC-Orbitrap-MS). An optimized LC gradient ensured the separation of dansyl-dipeptides, including positional isomers (e.g., leucine- and isoleucine-containing dipeptides). MS/MS collision energy in Orbitrap MS was optimized to provide characteristic fragment ion information to sequence dansyl-dipeptides. Using the optimized conditions, a CIL standard library consisting of retention time, MS, and MS/MS information of a whole set of 400 dansyl-dipeptides was constructed to facilitate rapid dipeptide identification. For qualitative analysis of dipeptides in real samples, IsoMS data processing software's parameters were tuned to improve the coverage of dipeptide annotation. Data-dependent acquisition was also carried out to improve the reliability of dipeptide identification. As examples of applications, we successfully identified a total of 321 dipeptides in rice wines and 105 dipeptides in human serum samples. For quantitative analysis, we demonstrated that the intensity ratios of the peak pairs from 96% of the dansyl-dipeptides detectable in a 1:1 mixture of 12C- and 13C-labeled rice wine samples were within ±20% of an expected value of 1.0. More than 90% of dipeptides were detected with a relative standard deviation of less than 10%, showing good performance of relative quantification.


Asunto(s)
Metabolómica , Espectrometría de Masas en Tándem , Humanos , Cromatografía Líquida de Alta Presión , Cromatografía Liquida/métodos , Compuestos de Dansilo/química , Marcaje Isotópico/métodos , Metaboloma , Metabolómica/métodos , Reproducibilidad de los Resultados , Espectrometría de Masas en Tándem/métodos , Dipéptidos/análisis
6.
Anal Chim Acta ; 1226: 340255, 2022 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-36068057

RESUMEN

Chemical isotope labeling (CIL) LC-MS is a powerful tool for metabolome analysis with markedly improved metabolomic coverage and quantification accuracy over the conventional LC-MS technique. In addition, with differential isotope labeling, each labeled metabolite is detected as a peak pair in the mass spectra, offering the possibility of differentiating true metabolite peaks from the singlet noise or background peaks. In this study, we examined the effects of instrument type on the detectability of true metabolites with a focus on the comparison of quadrupole time-of-flight (QTOF) and Orbitrap mass spectrometers. Using the same ultra-high-performance liquid chromatography setup and optimized running conditions for QTOF and Orbitrap, we compared the total number of peak pairs detected and identified from the two instruments using human urine and serum as the test samples. Many common peak pairs were detected from the two instruments; however, there were a significant number of unique peak pairs detected in each type of instrument. By combining the datasets obtained using QTOF and Orbitrap, the total number of peak pairs detected could be significantly increased. We also examined the effect of mass resolving power on peak pair detection in Orbitrap (60,000 vs. 120,000 resolution). The observed differences in peak pair detectability were much less than those of QTOF vs. Orbitrap. However, the type of peak pairs detected using different resolutions could be somewhat different, offering the possibility of increasing the overall number of peak pairs by combining the two datasets obtained at two different resolutions. The results from this study clearly indicate that instrument type can have a profound effect on metabolite detection in CIL LC-MS. Therefore, comparison of metabolome data generated using different instruments needs to be carefully done. Moreover, future research (e.g., hardware modifications) is warranted to minimize the differences in order to generate more reproducible metabolome data from different types of instruments.


Asunto(s)
Compuestos de Dansilo , Marcaje Isotópico , Humanos , Cromatografía Liquida/métodos , Compuestos de Dansilo/química , Marcaje Isotópico/métodos , Metaboloma , Metabolómica/métodos , Espectrometría de Masas en Tándem
7.
Angew Chem Int Ed Engl ; 61(44): e202208138, 2022 11 02.
Artículo en Inglés | MEDLINE | ID: mdl-35922902

RESUMEN

Although chemoselective labeling strategies show great potential in in-depth description of metabolomics, the associated time and expense limit applications in high-throughput and routine analysis. We report a fast and effective chemoselective labeling strategy based on multifunctionalized monolithic probes. A rapid pH-responsive boronate ester reaction was employed to immobilize and release probe molecules from substrate in 5 min. The mesoporous surface and hierarchically porous channels of the substrate allowed for accelerated labeling reactions. Moreover, the discernible boron beacons allowed for recognition of labeled metabolites with no need for expensive isotopic encoding. This new strategy has been successfully used for submetabolome analysis of yeast cells, serum, and faeces samples, with improved sensitivity for short chain fatty acids up to 1 600 times compared with non-labeled liquid chromatography-mass spectrometry (LC-MS) methods.


Asunto(s)
Ésteres , Metaboloma , Compuestos de Dansilo/química , Marcaje Isotópico , Boro , Metabolómica/métodos
8.
Anal Chem ; 94(33): 11650-11658, 2022 08 23.
Artículo en Inglés | MEDLINE | ID: mdl-35926115

RESUMEN

We report a segmented spectrum scan method using Orbitrap MS in chemical isotope labeling (CIL) liquid chromatography-mass spectrometry (LC-MS) for improving the metabolite detection efficiency. In this method, the full m/z range is divided into multiple segments with the scanning of each segment to produce multiple narrow-range spectra during the LC data acquisition. These segmented spectra are separately processed to extract the peak pair information with each peak pair arising from a differentially labeled metabolite in the analysis of a mixture of 13C and 12C reagent-labeled samples. The sublists of peak pairs are merged to form the final peak pair list from the LC-MS run. Various experimental conditions, including automatic gain control (AGC) values, mass resolutions, segment m/z widths, number of segments, and total data acquisition time in the LC run, were examined to arrive at an optimal setting in the segment scan for increasing the number of detectable metabolites while maintaining the same analysis time as in the full scan. The optimal method used a segment width of 120 m/z with 60k resolution for a 16 min CIL LC-MS run. Using dansyl-labeled human urine samples as an example, we demonstrated that this method could detect 5867 peak pairs or metabolites (not features), compared to 3765 peak pairs detectable in a full scan, representing a 56% gain. Out of 5867 peak pairs, 5575 (95.0%) could be identified or mass-matched. The relative quantification accuracy was slightly reduced (81% peak pairs were within ±25% of the expected peak ratio of 1.0 in full, compared to 87% in the full scan) due to the inclusion of more low-abundance peak pairs in the segment scan. The peak ratio measurement precision was not significantly affected by the segment scan. We also showed the increase of the peak pair number detectable from 3843 in the full scan to 7273 (89% gain) using the Orbitrap operated at 120k resolution with a 60 m/z segment width when multiple repeat sample injections were used. Thus, segment scan Orbitrap MS is an enabling method for detecting coeluting metabolites in CIL LC-MS for increasing the metabolomic coverage.


Asunto(s)
Compuestos de Dansilo , Marcaje Isotópico , Humanos , Isótopos de Carbono/química , Cromatografía Liquida/métodos , Compuestos de Dansilo/química , Marcaje Isotópico/métodos , Espectrometría de Masas/métodos , Metaboloma , Metabolómica/métodos
9.
J Fluoresc ; 32(1): 215-226, 2022 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-34694547

RESUMEN

A new and innovative fluorescent structure was constructed on Cyclotriveratrylene affiliated to Dansyl chloride (DNSC) and was used to detect Cr (III) and Fe (III) among the various cations by using spectrofluorimetric method. The characterization of the new compound was carried out using the 1H-NMR, 13C-NMR, and ESI-MS techniques. The interaction and role of DNSC-CTV with cations was reviewed. A change in the spectra of absorption directed to the conclusion that there is substantial interaction of Cr (III) and Fe (III) with DNSC-CTV. Furthermore the interaction of the ligand DNSC-CTV with the metal ions Chromium (III) and Iron (III) showed quenching in the emission spectra. Quantum yield of the complexes were calculated and the stern volmer analysis was done to deduce the quenching mechanism of fluorescence to being either static or dynamic. The molecule DNSC-CTV was further studied with the help of computational methods such as molecular docking to study the binding interactions and properties of the molecule.


Asunto(s)
Técnicas Biosensibles/métodos , Cromo/análisis , Colorantes Fluorescentes , Fluorometría/métodos , Hierro/análisis , Espectrometría de Fluorescencia/métodos , Cationes , Compuestos de Dansilo/química , Simulación del Acoplamiento Molecular , Compuestos Policíclicos/química
10.
J Fluoresc ; 32(1): 227-233, 2022 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-34705194

RESUMEN

A simple pH fluorescent probe based on dansyl derivative (Bu-Dns) was synthesized via one-step reaction between dansyl chloride and 4-bromobutan-1-amine hydrobromide. The obtained probe showed good selectivity and sensitivity toward H+ in acidic medium over two pH units (~4-2). At pH > 4, Bu-Dns solution emitted yellow fluorescent light, which became gradually weaker with decreasing pH value. At pH below 2, complete fluorescence quenching occurred. The pH response of Bu-Dns was ascribed to the protonation of dimethylamine group. The lack of influence of metal ion on pH response increases the prevalence of Bu-Dns in the potential detection of pH variation in acidic aqueous media. More importantly, it can sense the intracellular pH change in acidic range.


Asunto(s)
Colorantes Fluorescentes/síntesis química , Imagen Molecular/métodos , Compuestos de Dansilo/química , Fluorescencia , Células HeLa , Humanos , Concentración de Iones de Hidrógeno , Soluciones , Agua/química
11.
Int J Mol Sci ; 22(17)2021 Aug 25.
Artículo en Inglés | MEDLINE | ID: mdl-34502095

RESUMEN

Sphingosine-1-phosphate (S1P) synthesized by sphingosine kinase (SPHK) is a signaling molecule, involved in cell proliferation, growth, differentiation, and survival. Indeed, a sharp increase of S1P is linked to a pathological outcome with inflammation, cancer metastasis, or angiogenesis, etc. In this regard, SPHK/S1P axis regulation has been a specific issue in the anticancer strategy to turn accumulated sphingosine (SPN) into cytotoxic ceramides (Cers). For these purposes, there have been numerous chemicals synthesized for SPHK inhibition. In this study, we investigated the comparative efficiency of dansylated PF-543 (DPF-543) on the Cers synthesis along with PF-543. DPF-543 deserved attention in strong cytotoxicity, due to the cytotoxic Cers accumulation by ceramide synthase (CerSs). DPF-543 exhibited dual actions on Cers synthesis by enhancing serine palmitoyltransferase (SPT) activity, and by inhibiting SPHKs, which eventually induced an unusual environment with a high amount of 3-ketosphinganine and sphinganine (SPA). SPA in turn was consumed to synthesize Cers via de novo pathway. Interestingly, PF-543 increased only the SPN level, but not for SPA. In addition, DPF-543 mildly activates acid sphingomyelinase (aSMase), which contributes a partial increase in Cers. Collectively, a dansyl-modified DPF-543 relatively enhanced Cers accumulation via de novo pathway which was not observed in PF-543. Our results demonstrated that the structural modification on SPHK inhibitors is still an attractive anticancer strategy by regulating sphingolipid metabolism.


Asunto(s)
Ceramidas/biosíntesis , Inhibidores Enzimáticos/farmacología , Fosfotransferasas (Aceptor de Grupo Alcohol)/antagonistas & inhibidores , Pirrolidinas/química , Sulfonas/química , Animales , Línea Celular , Supervivencia Celular/efectos de los fármacos , Compuestos de Dansilo/química , Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/toxicidad , Humanos , Metanol/química , Esfingosina/metabolismo , Especificidad por Sustrato , Porcinos
12.
Molecules ; 26(9)2021 May 06.
Artículo en Inglés | MEDLINE | ID: mdl-34066554

RESUMEN

Catecholamines and steroids are well-known neurotransmitters and hormones that rapidly change the excitability of neurons. Alopecia areata is a disease for which the exact cause is unknown, but it is considered to be associated with stress, and so the simultaneous analysis of catecholamines and steroids is required for the diagnosis of alopecia areata. Thus, we herein report the simultaneous analysis of catecholamines and steroids bearing different functional groups for the first time, during which it was necessary to carry out a serial hydrolysis procedure. Following hydrolysis of the urine samples to produce the free forms from the urinary conjugates, ethyl acetate extractions were carried out, and chemical derivatization was performed using dansyl chloride to increase the sensitivity of the liquid chromatography-tandem mass spectrometry method. The matrix effects and recoveries of this analytical method were validated, giving values of 85.4-122.9% and 88.8-123.0%, respectively. In addition, the method accuracy and precision were assessed, giving values of 0.4-21.5% and 2.0-21.6% for the intra-day and inter-day precisions, respectively. This validated method was then applied to identify differences between patients with and without alopecia areata, wherein the metanephrine content was found to be significantly higher in the alopecia areata patient group. This quantitative profiling method can also be applied to steroid-dependent diseases, as well as catecholamine-related diseases.


Asunto(s)
Alopecia Areata/orina , Catecolaminas/orina , Esteroides/orina , Calibración , Cromatografía Liquida , Creatinina/orina , Compuestos de Dansilo/química , Humanos , Hidrólisis , Metanefrina/análisis , Reproducibilidad de los Resultados , Esteroides/química , Espectrometría de Masas en Tándem
13.
J Chromatogr A ; 1643: 462082, 2021 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-33780884

RESUMEN

Herein, the fabrication of a fascinating multifunctional cyclodextrin (CD) chiral stationary phase and its chiral separation performance in capillary electrochromatography are proposed. A facile interfacial polymerization was used to anchor ethanediamine-ß-cyclodextrin (EDA-ß-CD) polymerized with trimesoyl chloride (TMC) and to form the chiral stationary phase (CSP) composite onto the surface wall of the capillary. The characters of prepared columns were confirmed by Fourier transform infrared spectroscopy (FT-IR), X-ray Photoelectron Spectrometer (XPS), scanning electron microscopy (SEM) and energy dispersive X-ray spectrometry (EDS). This novel CSP offers multi-typical interactions including hydrogen bonding, π-interaction, hydrophobic and electrostatic interaction as well as steric effects which contribute to prominent chiral recognition for Dansyl-DL-amino acids in CEC modes. The EDA-ß-CD modified column showed eminent enantioseparation performance towards five Dansyl-DL-amino acids (the DL-forms of valine, threonine, leucine, phenylalanine, serine). Besides, the prepared columns were perfectly reproducible and stable. The relative standard deviations of the enantiomer retention times for intra-day (n = 5), inter-day (n = 3) runs and column-to-columns (n = 3) are below 0.54%, 1.35% and 4.89%, individually. This innovative chiral stationary phase shows a broader application view and scope in chiral recognition domain.


Asunto(s)
Aminoácidos/análisis , Electrocromatografía Capilar/métodos , Compuestos de Dansilo/química , beta-Ciclodextrinas/química , Aminoácidos/aislamiento & purificación , Compuestos de Dansilo/análisis , Compuestos de Dansilo/aislamiento & purificación , Etilenodiaminas/química , Leucina/análogos & derivados , Leucina/análisis , Leucina/aislamiento & purificación , Fenilalanina/análisis , Fenilalanina/aislamiento & purificación , Reproducibilidad de los Resultados , Espectroscopía Infrarroja por Transformada de Fourier , Estereoisomerismo
14.
Molecules ; 26(4)2021 Feb 17.
Artículo en Inglés | MEDLINE | ID: mdl-33671270

RESUMEN

The aim of this work was to characterize biogenic amines (BAs) in different parts of Lycium barbarum L. using HPLC with dansyl chloride derivatization, and jointly, to provide referential data for further exploration and utilization of Lycium barbarum L. The linear correlation coefficients for all BAs were above 0.9989. The limits of detection and quantification were 0.015-0.075 and 0.05-0.25 µg/mL, respectively. The relative standard deviations for the intra-day and inter-day precision were 0.66-2.69% and 0.91-4.38%. The described method has good repeatability and intermediate precision for the quantitative determination of BAs in different parts of Lycium barbarum L. Satisfactory recovery for all amines was obtained (79.3-110.3%). The result showed that there were four kinds of BAs. The highest putrescine content (20.9 ± 3.2 mg/kg) was found in the flower. The highest histamine content (102.7 ± 5.8 mg/kg) was detected in the bark, and the highest spermidine (13.3 ± 1.6 mg/kg) and spermine (23.7 ± 2.0 mg/kg) contents were detected in the young leaves. The high histamine (HIS) content in the bark may be one of the reasons why all of the parts of Lycium barbarum L., except the bark, are used for medicine or food in China. Meanwhile, the issue of the high concentration of HIS should be considered when exploiting or utilizing the bark of Lycium barbarum L.


Asunto(s)
Aminas Biogénicas/análisis , Cromatografía Líquida de Alta Presión/métodos , Compuestos de Dansilo/química , Lycium/química , Espectrometría de Masas , Estándares de Referencia , Reproducibilidad de los Resultados , Soluciones
15.
Chem Commun (Camb) ; 57(21): 2653-2656, 2021 Mar 14.
Artículo en Inglés | MEDLINE | ID: mdl-33587737

RESUMEN

Here we present a novel peptide-based fluorescent "turn-on" molecule P1 for detecting RNA, in a double or single strand, AU-rich or CG-rich. Both computational and experimental studies indicate that the detection efficiency depends on the binding affinity of P1 and conformational changes. P1 could be applied for cell imaging without any additional transfection vectors. Selective detection of RNA in cells was determined by RNase digestion. Successful application of P1 for RNA imaging in cell mitosis reveals that it may have broad applications in research, biotechnology and medical science.


Asunto(s)
Compuestos de Dansilo/química , Colorantes Fluorescentes/química , Péptidos/química , ARN/análisis , Compuestos de Dansilo/síntesis química , Compuestos de Dansilo/metabolismo , Colorantes Fluorescentes/síntesis química , Colorantes Fluorescentes/metabolismo , Células HeLa , Humanos , Simulación del Acoplamiento Molecular , Simulación de Dinámica Molecular , Péptidos/síntesis química , Péptidos/metabolismo , ARN/metabolismo , Espectrometría de Fluorescencia
16.
Artículo en Inglés | MEDLINE | ID: mdl-32949926

RESUMEN

A sensitive liquid chromatography-tandem mass spectrometry (LC-MS) method was developed for the screening of five ß-blockers (BBs), including atenolol, metoprolol, bisoprolol, propranolol, and betaxolol, in rabbit plasma. An inhouse prepared hydrazonoyl chloride compound (UOSA54) and dansyl chloride (DNS) were successfully coupled with BBs via the amino functional group and analyzed by LC-MS/MS. The excess hydrazonoyl chloride was characterized by a negligible ionization suppression at the electrospray-ionization (ESI) source, which enables the analysis of BBs at a low concentration level. The relative ESI-MS response of derivatized to underivatized BBs was enhanced 2.3 to 3.7-fold. The developed method could be applied for screening of BBs in samples by searching the most abundant MS product ions, including m/z 169 and 211, in addition to the precursor ion and the cleavage of ether moiety. The method could be applied for trace analysis and screening of BBs abuse. The use of UOSA54 was adventitious over dansylated derivatives because of minimal reaction by-products and the negligible ionization suppression effect. The extraction efficiency of BBs from rabbit plasma was improved to reach 77.5-93.9% using tert-butylamine and Chromabond® C18ec-100 mg column. The optimal reaction conditions were optimized and validated. The linear range of analyzed BBs in rabbit plasma was within the range of 0.1 to 25.0 ng/mL, while the limit of quantification (LO Q) was ranged from 0.10 to 0.25 ng/mL.


Asunto(s)
Antagonistas Adrenérgicos beta/sangre , Cromatografía Liquida/métodos , Compuestos de Dansilo/química , Espectrometría de Masas en Tándem/métodos , Antagonistas Adrenérgicos beta/química , Animales , Límite de Detección , Modelos Lineales , Conejos , Reproducibilidad de los Resultados
17.
Inorg Chem ; 59(15): 10920-10927, 2020 Aug 03.
Artículo en Inglés | MEDLINE | ID: mdl-32654480

RESUMEN

A reversible fluorescent probe DRhFe is devised by linking spirolactam rhodamine and dansylamide through an Fe3+ ionophore N2-hydroxyethyldiethylenetriamine, where Fe3+ chelation generating rhodamine B can switch intramolecular fluorescence resonance energy transfer for ratiometric Fe3+ sensing. Probe DRhFe exhibits an Fe3+-specific emission shift from 483 to 576 nm, and this ratiometric response has been successfully applied to monitor labile Fe3+ fluctuations in cells undergoing ferroptosis.


Asunto(s)
Compuestos Férricos/análisis , Transferencia Resonante de Energía de Fluorescencia , Colorantes Fluorescentes/química , Compuestos de Dansilo/química , Ferroptosis , Colorantes Fluorescentes/síntesis química , Células HeLa , Humanos , Estructura Molecular , Imagen Óptica , Rodaminas/química
18.
Molecules ; 25(11)2020 Jun 08.
Artículo en Inglés | MEDLINE | ID: mdl-32521655

RESUMEN

Bacterial transglutaminase was used to label human plasma proteins with fluorescent tags. Protein lysines were modified with dansyl-epsilon-aminohexyl-Gln-Gln-Ile-Val-OH (dansylQQIV), while protein glutamines were modified with dansyl cadaverine. Labeled proteins included human butyrylcholinesterase, apolipoprotein A-1, haptoglobin, haptoglobin-related protein, immunoglobulin heavy chain, and hemopexin. Tryptic peptides were analyzed by LC-MS/MS on an Orbitrap Fusion Lumos mass spectrometer. Modified residues were identified in Protein Prospector and Proteome Discoverer searches of mass spectrometry data. The MS/MS fragmentation spectra from dansylQQIV-modified peptides gave intense peaks at 475.2015, 364.1691, 347.1426, 234.0585, and 170.0965 m/z. These signature ions are useful markers for identifying modified peptides. Human butyrylcholinesterase retained full activity following modification by dansylQQIV or dansyl cadaverine.


Asunto(s)
Butirilcolinesterasa/química , Cadaverina/química , Compuestos de Dansilo/química , Glutamina/química , Lisina/química , Espectrometría de Masas en Tándem/métodos , Humanos
19.
Int J Mol Sci ; 21(10)2020 May 18.
Artículo en Inglés | MEDLINE | ID: mdl-32443620

RESUMEN

Starting from dansyl-chloride, in reaction with 1,1-diphenylhydrazine and methoxyamine, two new fluorescent derivatives 1 and 2 were obtained and characterized by NMR, IR, UV-Vis, HR-MS, and fluorescence spectroscopy. The single-crystal X-ray structure was obtained for compound 2. Both compounds generate free radicals by oxidation, as demonstrated by ESR spectroscopy. Compound 1 generates the corresponding hydrazyl-persistent free radical, evidenced directly by ESR spectroscopy, while compound 2 generates in the first instance the methoxyaminyl short-lived free radical, which decomposes rapidly with the formation of the methoxy radical, evidenced by the ESR spin-trapping technique. By oxidation of compounds 1 and 2, their fluorescence is quenched.


Asunto(s)
Compuestos de Dansilo/química , Radicales Libres/síntesis química , Hidroxilaminas/química , Fenilhidrazinas/química , Espectroscopía de Resonancia por Spin del Electrón , Detección de Spin
20.
Anal Chem ; 92(13): 9265-9272, 2020 07 07.
Artículo en Inglés | MEDLINE | ID: mdl-32469506

RESUMEN

Blood metabolomics has been widely used for discovering potential metabolite biomarkers of various diseases. In this study, we report our investigation of the effects of freeze-thaw cycles (FTCs) of human serum samples on quantitative metabolomics using a differential chemical isotope labeling (CIL) LC-MS method. A total of 99 serum samples collected from healthy individuals (47 females and 52 males) were subjected to five FTCs, followed by 12C-/13C-dansylation labeling LC-MS analysis. A total of 2790 peak pairs or metabolites were relatively quantified among the 495 comparative samples, including 150 positively identified metabolites, 235 high-confident putatively identified metabolites and 1949 mass-matched metabolites from database searches. Multivariate analysis of the metabolome data showed a clustering of the third to fifth FTC samples in contrast to the separation of the first and second FTC samples, indicating that the extent of FTC-induced metabolome changes became smaller after the third cycle. The changing patterns among the FTC-effected metabolites were found to be complex. Using sex as a biological factor for grouping, we observed a clear separation of males and females when the samples were subjected to the same number of FTCs. However, when the male- and female-samples with different numbers of FTCs were compared, the number of significant metabolites found in male-female comparison increased dramatically, indicating that FTC effects could lead to a large number of false positives in biomarker discovery. Finally, we proposed a method of detecting the FTC effects by reanalyzing the original samples after subjecting them to an additional FTC.


Asunto(s)
Metaboloma , Metabolómica/métodos , Suero/metabolismo , Área Bajo la Curva , Cromatografía Líquida de Alta Presión , Compuestos de Dansilo/química , Análisis Discriminante , Femenino , Congelación , Humanos , Marcaje Isotópico , Análisis de los Mínimos Cuadrados , Masculino , Espectrometría de Masas , Análisis de Componente Principal , Curva ROC , Suero/química
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