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1.
Braz. J. Pharm. Sci. (Online) ; 58: e20205, 2022. tab, graf
Artículo en Inglés | LILACS | ID: biblio-1403727

RESUMEN

Abstract Several factors contribute to the resistance of some pathogenic microorganisms and this fact requires the search for new therapeutic alternatives. The genus Cyperus (family Cyperaceae) groups species that present chemical compounds of pharmacological interest, mainly with antimicrobial action. Thus, the present work was carried out to investigate the antimicrobial activities, antioxidants and the phytochemical profile of Cyperus articulatus L. and Cyperus iria L. Hydroalcoholic extracts (1:1, v:v) of the aerial and underground parts of these species were used to analyze the total phenol content and to evaluate the in vitro antioxidant activity against the DPPH (2,2-diphenyl-1-picrylhydrazyl). The ethyl acetate and chloroform phases resulting from liquid-liquid partitioning of C. articulatus and C. iria extracts were evaluated in antimicrobial assays and subject to high performance liquid chromatography (HPLC-DAD) analysis. The chromatograms obtained by HPLC-DAD allowed us to identify four compounds: chlorogenic acid, catechin, quercetin, and quercitrin. The hydroalcoholic extracts of C. articulatus and C. iria showed a weak antioxidant activity with IC50 of 395.57 and 321.33 µg/mL (aerial parts), and 1,114.01 and 436.82 µg/mL (underground parts), respectively. Regarding antimicrobial activity, the chloroform phase of C. iria showed the best result at the concentration of only 31.2 µg/mL against the pathogens Candida albicans and Staphylococcus aureus. The ethyl acetate phases of the aerial parts of C. articulatus and C. iria did not show antimicrobial activity


Asunto(s)
Cyperaceae/clasificación , Cyperus/efectos adversos , Fitoquímicos , Antiinfecciosos/análisis , Antioxidantes/análisis , Plantas Medicinales/efectos adversos , Candida albicans , Cromatografía Líquida de Alta Presión/métodos , Concentración 50 Inhibidora
2.
Chromosoma ; 129(3-4): 285-297, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-33165742

RESUMEN

For a long time, the Cyperid clade (Thurniceae-Juncaceae-Cyperaceae) was considered a group of species possessing holocentromeres exclusively. The basal phylogenetic position of Prionium serratum (Thunb.) Drège (Thurniceae) within Cyperids makes this species an important specimen to understand the centromere evolution within this clade. In contrast to the expectation, the chromosomal distribution of the centromere-specific histone H3 (CENH3), alpha-tubulin and different centromere-associated post-translational histone modifications (H3S10ph, H3S28ph and H2AT120ph) demonstrate a monocentromeric organisation of P. serratum chromosomes. Analysis of the high-copy repeat composition resulted in the identification of two centromere-localised satellite repeats. Hence, monocentricity was the ancestral condition for the Juncaceae-Cyperaceae-Thurniaceae Cyperid clade, and holocentricity in this clade has independently arisen at least twice after differentiation of the three families, once in Juncaceae and the other one in Cyperaceae. In this context, methods suitable for the identification of holocentromeres are discussed.


Asunto(s)
Cromosomas de las Plantas , Cyperaceae/clasificación , Cyperaceae/genética , Filogenia , Centrómero/genética , ADN Satélite , Genoma de Planta , Genómica/métodos , Secuenciación de Nucleótidos de Alto Rendimiento , Hibridación Fluorescente in Situ , Proteínas de Plantas/genética
3.
Sci Data ; 7(1): 175, 2020 06 11.
Artículo en Inglés | MEDLINE | ID: mdl-32528014

RESUMEN

Kobresia plants are important forage resources in the Qinghai-Tibet Plateau and are essential in maintaining the ecological balance of grasslands. Therefore, it is beneficial to obtain Kobresia genome resources and study the adaptive characteristics of Kobresia plants in the Qinghai-Tibetan Plateau. We assembled the genome of Kobresia littledalei C. B. Clarke, which was about 373.85 Mb in size. 96.82% of the bases were attached to 29 pseudo-chromosomes, combining PacBio, Illumina and Hi-C sequencing data. Additional investigation of the annotation identified 23,136 protein-coding genes. 98.95% of these were functionally annotated. According to phylogenetic analysis, K. littledalei in Cyperaceae separated from Poaceae about 97.6 million years ago after separating from Ananas comosus in Bromeliaceae about 114.3mya. For K. littledalei, we identified a high-quality genome at the chromosome level. This is the first time a reference genome has been established for a species of Cyperaceae. This genome will help additional studies focusing on the processes of plant adaptation to environments with high altitude and cold weather.


Asunto(s)
Cyperaceae/clasificación , Genoma de Planta , Filogenia , Cromosomas de las Plantas , Tibet
4.
Mol Phylogenet Evol ; 145: 106727, 2020 04.
Artículo en Inglés | MEDLINE | ID: mdl-31899222

RESUMEN

Trichophoreae is a nearly cosmopolitan Cyperaceae tribe that contains ~17 species displaying striking variation in size, inflorescence complexity, and perianth morphology. Although morphologically distinct, the status of its three genera (Cypringlea, Oreobolopsis and Trichophorum) is controversial because recent phylogenetic studies have suggested they might not be reciprocally monophyletic. However, previous analyses have shown conflicting topologies and consistently poor support due to an initial rapid diversification of the tribe. We analysed restriction-site associated DNA sequencing (RADseq) data from nearly all species of the clade, combined with five Sanger-based markers (matK, ndhF, rps16, ETS-1f, ITS) sampled extensively within species. This approach allowed us to resolve deep and shallow relationships within Trichophoreae for the first time, despite an anomaly zone spanning several successive short branches that produced considerable gene tree incongruence. Analyses reveal a primary phylogenetic split of the tribe into two clades roughly corresponding to an East Asian-North American disjunction that dates back to the mid-Miocene, with both clades comprised of a mixture of reduced unispicate and larger taxa with highly compound inflorescences. Morphological characters traditionally used in the circumscription of Trichophoreae genera are shown to be homoplasious. Several of these characters correlate best with climatic conditions, with the most reduced species occurring in open habitats at high latitudes and altitudes. Close relatives with highly compound inflorescences are found in temperate or subtropical forest understories. Cypringlea and Oreobolopsis are deeply nested within Trichophorum, and we merge all three genera into a more broadly circumscribed Trichophorum. We also show that Scirpus filipes is another previously unrecognized East Asian species of Trichophorum with highly compound inflorescences.


Asunto(s)
Cyperaceae/clasificación , Teorema de Bayes , Biodiversidad , Cyperaceae/anatomía & histología , Cyperaceae/genética , ADN de Plantas/química , ADN de Plantas/metabolismo , ADN Ribosómico/química , ADN Ribosómico/metabolismo , Funciones de Verosimilitud , Filogenia , Filogeografía , Plastidios/genética , Análisis de Secuencia de ADN
5.
Sci Total Environ ; 650(Pt 1): 505-514, 2019 Feb 10.
Artículo en Inglés | MEDLINE | ID: mdl-30205341

RESUMEN

Plants are particularly sensitive to climate change in alpine ecosystem of the Tibetan Plateau. The various mountain micro-climates provide a natural gradient for space-for-time substitution research that plant responses to climate change. In this study, we surveyed the plant community in term of species composition, diversity and biomass across 189 sites on a hill of the Tibetan Plateau and analysed the individual and integrated effects of soil temperature and moisture on the plant community. The results showed that, at the quadrat scale, there were decrease in richness of 1.08 species for every 1 °C increase in soil temperature and 3.56 species for every 10% decrease in soil moisture. The integrated effects of increasing soil temperature and decreasing moisture are expected to lead to a rapid decrease in species richness. Biomass had no significant correlation with soil temperature but significantly decreased with soil moisture decreasing (p < 0.01). Biomass would decrease when soil moisture was below 20%, no matter how the change of soil temperature. We also found that gramineae and perennial forbs were sensitive to climate change. With soil temperature increased, the proportion of gramineae increased, whereas the proportion of perennial forbs decreased. The integrated effects of soil temperature increasing and moisture decreasing caused a shift from sedge-controlled to gramineae-controlled communities in alpine meadow. This study not only enhances our understanding of mountain plant community dynamics under climate change, but also predicts the shift of vegetation response to climate change on high-elevation alpine meadow.


Asunto(s)
Cambio Climático , Pradera , Plantas/clasificación , Altitud , Biodiversidad , Biomasa , Cyperaceae/clasificación , Cyperaceae/crecimiento & desarrollo , Ecosistema , Desarrollo de la Planta , Poaceae/clasificación , Poaceae/crecimiento & desarrollo , Suelo/química , Temperatura , Tibet , Agua
6.
PLoS One ; 13(9): e0203478, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30260979

RESUMEN

Scleria subgen. Hypoporum (Cyperaceae), with 68 species, is the second largest subgenus in Scleria. Species of this pantropically distributed subgenus generally occur in seasonally or permanently wet grasslands or on shallow soils over sandstone or lateritic outcrops, less often they can be found in (open) woodlands. Previous studies established the monophyly of the subgenus, but the relationships between the species remained uncertain. In this study, DNA sequence data of 61 taxa of Scleria subgen. Hypoporum, where possible represented by multiple accessions from across their distributional range, were obtained for four molecular markers: the coding chloroplast marker ndhF, the chloroplast intron rps16 and the nuclear ribosomal regions ETS and ITS. Phylogenetic trees were constructed using Bayesian inference and maximum likelihood approaches. A species tree was constructed to summarise the results. The results indicate the existence of three sections: the monotypic, pantropically occurring, Scleria sect. Lithospermae, a new section from central and south America containing two species, and Scleria sect. Hypoporum, also pantropically distributed, containing the remainder of the species of the subgenus. Relationships in the latter section are not fully resolved. However, three or four different clades can be distinguished supported by some morphological characters. Our results indicate at least six new species in Scleria sect. Hypoporum. The new section and species are described in a taxonomical treatment. Their morphology is compared with (morphologically) closely related species.


Asunto(s)
Proteínas de Cloroplastos/genética , Cyperaceae/clasificación , Cyperaceae/genética , NADH Deshidrogenasa/genética , Filogenia , Proteínas de Plantas/genética , América Central , ADN de Plantas/genética , América del Sur
7.
Mol Phylogenet Evol ; 126: 196-209, 2018 09.
Artículo en Inglés | MEDLINE | ID: mdl-29679713

RESUMEN

We investigated the monophyly of Costularia (25 species), a genus of tribe Schoeneae (Cyperaceae) that illustrates a remarkable distribution pattern from southeastern Africa, over Madagascar, the Mascarenes and Seychelles, to Malesia and New Caledonia. A further species, Tetraria borneensis, has been suggested to belong to Costularia. Relationships and divergence times were inferred using an existing four marker phylogeny of Cyperaceae tribe Schoeneae expanded with newly generated sequence data mainly for Costularia s.l. species. Phylogenetic reconstruction was executed using Bayesian inference and maximum likelihood approaches. Divergence times were estimated using a relaxed molecular clock model, calibrated with fossil data. Based on our results, Tetraria borneensis is not related to the species of Costularia. Costularia s.l. is composed of four distinct evolutionary lineages. Two lineages, one including the type species, are part of the Oreobolus clade, i.e. a much reduced genus Costularia restricted to southeastern Africa, Madagascar, the Mascarenes and Seychelles, and a small endemic genus from New Caledonia for which a new genus Chamaedendron is erected based on Costularia subgenus Chamaedendron. The other two lineages are part of the Tricostularia clade, i.e. a separate single-species lineage from the Seychelles for which a new genus (Xyroschoenus) is described, and Costularia subgenus Lophoschoenus. For the latter, more research is needed to test whether they are congeneric with the species placed in the reticulate-sheathed Tetraria clade.


Asunto(s)
Cyperaceae/clasificación , Cyperaceae/genética , Filogenia , África , Teorema de Bayes , Biodiversidad , Cyperaceae/anatomía & histología , Funciones de Verosimilitud , Madagascar , Nueva Caledonia , Análisis de Secuencia de ADN , Seychelles , Factores de Tiempo
8.
PLoS One ; 12(12): e0189769, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-29281689

RESUMEN

Plants growing in high-mountain environments may share common morphological features through convergent evolution resulting from an adaptative response to similar ecological conditions. The Carex flava species complex (sect. Ceratocystis, Cyperaceae) includes four dwarf morphotypes from Circum-Mediterranean mountains whose taxonomic status has remained obscure due to their apparent morphological resemblance. In this study we investigate whether these dwarf mountain morphotypes result from convergent evolution or common ancestry, and whether there are ecological differences promoting differentiation between the dwarf morphotypes and their taxonomically related large, well-developed counterparts. We used phylogenetic analyses of nrDNA (ITS) and ptDNA (rps16 and 5'trnK) sequences, ancestral state reconstruction, multivariate analyses of macro- and micromorphological data, and species distribution modeling. Dwarf morphotype populations were found to belong to three different genetic lineages, and several morphotype shifts from well-developed to dwarf were suggested by ancestral state reconstructions. Distribution modeling supported differences in climatic niche at regional scale between the large forms, mainly from lowland, and the dwarf mountain morphotypes. Our results suggest that dwarf mountain morphotypes within this sedge group are small forms of different lineages that have recurrently adapted to mountain habitats through convergent evolution.


Asunto(s)
Evolución Biológica , Cyperaceae/genética , Adaptación Fisiológica , Cyperaceae/clasificación , Cyperaceae/fisiología , Región Mediterránea , Modelos Teóricos , Filogenia , Especificidad de la Especie
9.
Mol Ecol ; 26(15): 4027-4044, 2017 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-28437593

RESUMEN

The extent of the Pleistocene glaciations in the Patagonian Channel region (southwesternmost South America) and their impact on the vegetation there are largely unknown. Whether the regional flora was wiped out completely (tabula rasa) or survived in ice-free pockets (in situ survival) is still an open question. The molecular imprint of either scenario should still be visible in extant populations. Therefore, DNA sequence data of Oreobolus obtusangulus Gaudich. (Cyperaceae) were analysed. This species is an abundant constituent of Patagonian cushion peat bogs, one of the Patagonian Channel region's major vegetation types. Three hundred and eighty-four individuals from 48 populations were sequenced for two chloroplast (ycf3-psaA and trnQUUG -psbK intergenic spacers) and 14 nuclear loci containing simple sequence repeats (SSRs; microsatellites). Phylogenetic reconstructions and the geographic distribution of genetic diversity revealed that the species was split into three main lineages whose general distributions comprise three separate major regions, that is, south-central Chile, Fuego-Patagonia and the East Patagonian Andes, which probably constitute glacial refugia. Postglacial migration fronts formed a suture zone with high levels of genetic diversity in the Northwest Patagonian Andes, where remnants of a supposedly ancestral lineage were also found to be locally restricted to a single population (Huinay). The heavily glaciated Patagonian Channels were likely recolonized from the northwest, and partly from the south. Although the westernmost Patagonian Channel population (Estero Bachem) harboured private SSR alleles (singletons) and showed slightly elevated genetic diversity, it remained unclear whether this population actually survived in situ. This study helps fill a major gap in reconstructing the Pleistocene vegetation history of West and Andean Patagonia.


Asunto(s)
Evolución Biológica , Cyperaceae/clasificación , Variación Genética , Genética de Población , Filogenia , Chile , ADN de Cloroplastos/genética , Haplotipos , Repeticiones de Microsatélite , Filogeografía , Análisis de Secuencia de ADN
10.
Amino Acids ; 49(5): 821-869, 2017 05.
Artículo en Inglés | MEDLINE | ID: mdl-28299478

RESUMEN

Plants are a rich source of amino acids and their individual abundance in plants is of great significance especially in terms of food. Therefore, it is of utmost necessity to create a database of the relative amino acid contents in plants as reported in literature. Since in most of the cases complete analysis of profiles of amino acids in plants was not reported, the units used and the methods applied and the plant parts used were different, amino acid contents were converted into relative units with respect to lysine for statistical analysis. The most abundant amino acids in plants are glutamic acid and aspartic acid. Pearson's correlation analysis among different amino acids showed that there were no negative correlations between the amino acids. Cluster analysis (CA) applied to relative amino acid contents of different families. Alismataceae, Cyperaceae, Capparaceae and Cactaceae families had close proximity with each other on the basis of their relative amino acid contents. First three components of principal component analysis (PCA) explained 79.5% of the total variance. Factor analysis (FA) explained four main underlying factors for amino acid analysis. Factor-1 accounted for 29.4% of the total variance and had maximum loadings on glycine, isoleucine, leucine, threonine and valine. Factor-2 explained 25.8% of the total variance and had maximum loadings on alanine, aspartic acid, serine and tyrosine. 14.2% of the total variance was explained by factor-3 and had maximum loadings on arginine and histidine. Factor-4 accounted 8.3% of the total variance and had maximum loading on the proline amino acid. The relative content of different amino acids presented in this paper is alanine (1.4), arginine (1.8), asparagine (0.7), aspartic acid (2.4), cysteine (0.5), glutamic acid (2.8), glutamine (0.6), glycine (1.0), histidine (0.5), isoleucine (0.9), leucine (1.7), lysine (1.0), methionine (0.4), phenylalanine (0.9), proline (1.1), serine (1.0), threonine (1.0), tryptophan (0.3), tyrosine (0.7) and valine (1.2).


Asunto(s)
Alismataceae/metabolismo , Aminoácidos/metabolismo , Cactaceae/metabolismo , Capparaceae/metabolismo , Cyperaceae/metabolismo , Alismataceae/clasificación , Aminoácidos/aislamiento & purificación , Cactaceae/clasificación , Capparaceae/clasificación , Análisis por Conglomerados , Cyperaceae/clasificación , Filogenia , Análisis de Componente Principal , Especificidad de la Especie
11.
Mol Phylogenet Evol ; 95: 183-95, 2016 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-26702956

RESUMEN

The role of geography and ecology in speciation are often discussed in the context of phylogenetic niche conservatism (PNC), the propensity of lineages to retain ancestral niche related traits. However, a recent paradigm shift focuses instead on measuring divergence of these traits in conjunction with patterns of speciation. Under this framework, we analyzed the diversification of North America's third most diverse family, Cyperaceae ("sedges"), using a modified Parsimony Analysis of Endemicity approach to identify floristic regions and ordination statistics to quantify species distribution in a continuous manner. Utilizing over 200,000 georeferenced specimens, we characterized the geographical distribution and climatic and edaphic niche space occupied by each species. We constructed a supermatrix phylogeny of the North American sedge flora, aided in part by the sequencing of all sedges of Wisconsin, and employed a multifaceted approach to assess the role of geographical and ecological divergence on lineage diversification. In addition to measuring phylogenetic signal for these traits, we also measured pairwise phylogenetic distance of species within floristic regions, calculated rates of speciation, and tested for correlations of speciation rate to tempo of geographical and ecological evolution. Our analyses consistently show that evolutionarily related species tend to be geographically unrelated. Rates of geographical and ecological diversification are closely linked to tempo of speciation, and exploration of geographical place coincides with divergence in ecological niche space. We highlight the benefits of treating geography in a continuous manner, and stress the importance of employing a diverse suite of analytical approaches in testing hypotheses regarding the evolution of range and niche.


Asunto(s)
Carex (Planta)/clasificación , Carex (Planta)/genética , Evolución Molecular , Especiación Genética , Cyperaceae/clasificación , Cyperaceae/genética , Ecosistema , Geografía , América del Norte , Fenotipo , Filogenia , Filogeografía , Estados Unidos
12.
An Acad Bras Cienc ; 87(4): 2177-88, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26628020

RESUMEN

Cyperaceae is an angiosperm family with the greatest diversity of species with Kranz anatomy. Four different types of Kranz anatomy (chlorocyperoid, eleocharoid, fimbristyloid and rhynchosporoid) have been described for this angiosperm family, and the occurrence and structural characteristics of these types are important to trace evolutionary hypotheses. The purpose of this study was to examine the available data on Cyperaceae Kranz anatomy, emphasizing taxonomy, geographic distribution, habitat and anatomy, to infer the potential origin of the Kranz anatomy in this family. The results showed that the four types of Kranz anatomy (associated with C4 photosynthesis) in Cyperaceae emerged numerous times in unrelated phylogenetic groups. However, the convergence of these anatomical types, except rhynchosporoid, was observed in certain groups. Thus, the diverse origin of these species might result from different environmental pressures that promote photorespiration. Greater variation in occurrence of Kranz anatomy and anatomical types was observed in Eleocharis, whose emergence of the C4 pathway was recent compared with other genera in the family, and the species of this genus are located in aquatic environments.


Asunto(s)
Evolución Biológica , Cyperaceae/anatomía & histología , Ecosistema , Cyperaceae/clasificación , Filogenia , Especificidad de la Especie
13.
PLoS One ; 10(8): e0136040, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26295345

RESUMEN

Past studies have widely documented the decrease in species diversity in response to addition of nutrients, however functional diversity is often independent from species diversity. In this study, we conducted a field experiment to examine the effect of nitrogen and phosphorus fertilization ((NH4)2 HPO4) at 0, 15, 30 and 60 g m-2 yr-1 (F0, F15, F30 and F60) after 4 years of continuous fertilization on functional diversity and species diversity, and its relationship with productivity in an alpine meadow community on the Tibetan Plateau. To this purpose, three community-weighted mean trait values (specific leaf area, SLA; mature plant height, MPH; and seed size, SS) for 30 common species in each fertilization level were determined; three components of functional diversity (functional richness, FRic; functional evenness, FEve; and Rao's index of quadratic entropy, FRao) were quantified. Our results showed that: (i) species diversity sharply decreased, but functional diversity remained stable with fertilization; (ii) community-weighted mean traits (SLA and MPH) had a significant increase along the fertilization level; (iii) aboveground biomass was not correlated with functional diversity, but it was significantly correlated with species diversity and MPH. Our results suggest that decreases in species diversity due to fertilization do not result in corresponding changes in functional diversity. Functional identity of species may be more important than functional diversity in influencing aboveground productivity in this alpine meadow community, and our results also support the mass ratio hypothesis; that is, the traits of the dominant species influenced the community biomass production.


Asunto(s)
Cyperaceae/efectos de los fármacos , Nitrógeno/farmacología , Fósforo/farmacología , Hojas de la Planta/efectos de los fármacos , Poaceae/efectos de los fármacos , Ranunculaceae/efectos de los fármacos , Biodiversidad , Biomasa , Cyperaceae/clasificación , Cyperaceae/crecimiento & desarrollo , Fertilizantes , Pradera , Humanos , Filogenia , Hojas de la Planta/crecimiento & desarrollo , Poaceae/clasificación , Poaceae/crecimiento & desarrollo , Ranunculaceae/clasificación , Ranunculaceae/crecimiento & desarrollo , Tibet
14.
Nat Commun ; 4: 2454, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24045305

RESUMEN

Species gain membership of regional assemblages by passing through multiple ecological and environmental filters. To capture the potential trajectory of structural changes in regional meta-communities driven by biological invasions, one can categorize species pools into assemblages of different residence times. Older assemblages, having passed through more environmental filters, should become more functionally ordered and structured. Here we calculate the level of compartmentalization (modularity) for three different-aged assemblages (neophytes, introduced after 1500 AD; archaeophytes, introduced before 1500 AD, and natives), including 2,054 species of vascular plants in 302 reserves in central Europe. Older assemblages are more compartmentalized than younger ones, with species composition, phylogenetic structure and habitat characteristics of the modules becoming increasingly distinctive. This sheds light on two mechanisms of how alien species are functionally incorporated into regional species pools: the settling-down hypothesis of diminishing stochasticity with residence time, and the niche-mosaic hypothesis of inlaid neutral modules in regional meta-communities.


Asunto(s)
Asteraceae/clasificación , Cyperaceae/clasificación , Filogenia , Dispersión de las Plantas/fisiología , Poaceae/clasificación , Rosaceae/clasificación , Adaptación Fisiológica , Asteraceae/fisiología , Biodiversidad , Cyperaceae/fisiología , República Checa , Ecosistema , Humanos , Especies Introducidas , Filogeografía , Poaceae/fisiología , Rosaceae/fisiología , Especificidad de la Especie , Factores de Tiempo
15.
An Acad Bras Cienc ; 85(2): 605-13, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-23828350

RESUMEN

The Cyperaceae species are present in different ecosystems and constitute the herbaceous extract. Of the approximately 5,500 species of the family; a third has Kranz anatomy, representing an important characteristic of the taxonomy and phylogeny of the group. In Cyperus laxus L. (non-Kranz) and Fimbristylis dichotoma Vahl (Kranz), development begins with germination that is marked by the emergence of the coleoptiles, followed by the primary root, which is ephemeral. The rhizome originates from the mesocotyl and it promotes the vascular connection between the roots, leaves and scapes. The continuity of the tissues is evidenced by the presence of an endodermis and pericycle in all vegetative organs. Leaves and scapes differ between the two species by the arrangement of mesophyll cells, which is regular in Cyperus laxus (non-Kranz) and arranged radially in Fimbristylis dichotoma (Kranz). Also differ in the number of bundles sheaths: two in Cyperus laxus (non-Kranz) and three in Fimbristylis dichotoma (Kranz). The outer bundle sheath in both species constitutes the endodermis, and the inner sheath in Cyperus laxus and the middle and inner sheaths in Fimbristylis dichotoma constitute the pericycle.


Asunto(s)
Cyperaceae/crecimiento & desarrollo , Cyperaceae/ultraestructura , Cyperaceae/clasificación , Especificidad de la Especie
16.
Biochem Genet ; 51(9-10): 686-97, 2013 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-23695555

RESUMEN

The northeastern bulrush, Scirpus ancistrochaetus, is a federally endangered wetland plant species found primarily in Pennsylvania, USA. Data on the population genetic structure of this species are needed by conservation managers to prioritize conservation efforts. In this study, we used two genetic marker systems to examine diversity and structure of this species in populations throughout Pennsylvania. The first simple and inexpensive approach utilized RAPD primers; our second, more detailed approach relied on DNA sequencing of single nucleotide polymorphisms. We found genetic variation using both RAPDs and sequencing and found some overlap in information between the two methods, including clusters of related populations and the identification of a genetically unique population. Future studies will seek to examine variation across the full geographic range of the species.


Asunto(s)
Cyperaceae/genética , ADN de Plantas/genética , Especies en Peligro de Extinción , Variación Genética , Conservación de los Recursos Naturales , Cyperaceae/clasificación , Marcadores Genéticos , Pennsylvania , Polimorfismo de Nucleótido Simple , Técnica del ADN Polimorfo Amplificado Aleatorio , Análisis de Secuencia de ADN
17.
Ann Bot ; 111(4): 499-529, 2013 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-23378523

RESUMEN

BACKGROUND: Sedges (Cyperaceae) form an important ecological component of many ecosystems around the world. Sword and rapier sedges (genus Lepidosperma) are common and widespread components of the southern Australian and New Zealand floras, also occurring in New Caledonia, West Papua, Borneo, Malaysia and southern China. Sedge ecology is seldom studied and no comprehensive review of sedge ecology exists. Lepidosperma is unusual in the Cyperaceae with the majority of species occurring in dryland habitats. SCOPE: Extensive review of ecological literature and field observations shows Lepidosperma species to be important components of many ecosystems, often dominating understorey and sedge-rich communities. For the first time, a detailed ecological review of a Cyperaceae genus is presented. CONCLUSIONS: Lepidosperma species are long-lived perennials with significant abundance and persistence in the landscape. Speciation patterns in the genus are of considerable interest due to complex biogeographical patterns and a high degree of habitat specificity. Potential benefits exist for medicinal products identified from several Lepidosperma species. Over 178 organisms, including 26 mammals, 42 birds, six reptiles, five amphibians, eight arachnids, 75 insects, three crustaceans and 13 fungi, are found to be dependent on, or making use of, Lepidosperma species. A significant relationship exists between Lepidosperma species and the moth genus Elachista. Implications for the conservation and ecology of both sedges and associated species are discussed.


Asunto(s)
Cyperaceae/clasificación , Cyperaceae/fisiología , Animales , Arácnidos , Australasia , Ecosistema , Insectos , Mamíferos , Plantas Medicinales , Reptiles
18.
Syst Biol ; 62(2): 205-19, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23103590

RESUMEN

In this article, we use supermatrix data-mining methods to reconstruct a large, highly inclusive phylogeny of Cyperaceae from nucleotide data available on GenBank. We explore the properties of these trees and their utility for phylogenetic inference, and show that even the highly incomplete alignments characteristic of supermatrix approaches may yield very good estimates of phylogeny. We present a novel pipeline for filtering sparse alignments to improve their phylogenetic utility by maximizing the partial decisiveness of the matrices themselves through a technique we call "phylogenetic scaffolding," and we present a new method of scoring tip instability (i.e. "rogue taxa") based on the I statistic implemented in the software Mesquite. The modified statistic, which we call I(S), is somewhat more straightforward to interpret than similar statistics, and our implementation of it may be applied to large sets of large trees. The largest sedge trees presented here contain more than 1500 tips (about one quarter of all sedge species) and are based on multigene alignments with more than 20 000 sites and more than 90% missing data. These trees match well with previously supported phylogenetic hypotheses, but have lower overall support values and less resolution than more heavily filtered trees. Our best-resolved trees are characterized by stronger support values than any previously published sedge phylogenies, and show some relationships that are incongruous with previous studies. Overall, we show that supermatrix methods offer powerful means of pursuing phylogenetic study and these tools have high potential value for many systematic biologists.


Asunto(s)
Algoritmos , Clasificación/métodos , Cyperaceae/clasificación , Cyperaceae/genética , Filogenia , Minería de Datos
19.
J Plant Res ; 126(3): 335-49, 2013 May.
Artículo en Inglés | MEDLINE | ID: mdl-23114970

RESUMEN

We aim to present phylogenetic major groups within the subfamily Cyperoideae (Cyperaceae) on the basis of three molecular data sets; nuclear ribosomal internal transcribed spacer and 5.8S ribosomal RNA region, the ribulose-1, 5-bisphosphate carboxylase/oxygenase large subunit gene, and trnL intron and trnL-F intergenic spacer. Three molecular data and two combined data sets were used to obtain robust and detailed phylogenetic trees by using maximum parsimony and Bayesian inference, respectively. We analyzed 81 genera and 426 species of Cyperaceae, including Korean species. We suggest one early diverged group (EDGs), and two major clades (FAEC and SDC) within the subfamily Cyperoideae. And the clade EDGs comprises six tribes (Schoeneae, Bisboeckelereae, Sclerieae, Cryptangieae, Trilepideae, and Rhynchosporeae) at the basal nodes of Cyperoideae. The FAEC clade (posterior probability [PP]/bootstrap value [BS] = 1.00/85) comprises four tribes (Fuireneae, Abildgaardieae, Eleocharideae, Cypereae), and the SDC clade (PP/BS = 1.00/86) comprises three tribes (Scirpeae, Dulichieae, Cariceae). These three clades used for phylogenetic groups in our study will be useful for establishing the major lineage of the sedge family. The phylogeny of Korean sedges was also investigated within the whole phylogeny of Cyperaceae. The 20 genera of Korean sedges were placed in 10 tribes forming 14 clades.


Asunto(s)
Cyperaceae/clasificación , Cyperaceae/genética , Filogenia , ADN Intergénico/genética , ADN de Plantas/genética , Corea (Geográfico) , Datos de Secuencia Molecular , Proteínas de Plantas/genética , Reacción en Cadena de la Polimerasa , ARN de Planta/genética , ARN Ribosómico 5.8S/genética , ARN de Transferencia de Leucina/genética , Ribulosa-Bifosfato Carboxilasa/genética , Análisis de Secuencia de ADN , Homología de Secuencia
20.
Braz. j. pharm. sci ; 49(4): 803-809, Oct.-Dec. 2013. ilus, tab
Artículo en Inglés | LILACS | ID: lil-704112

RESUMEN

In 1820, French naturalist August Saint Hillaire, during a visit in Espírito Santo (ES), a state in southeastern Brazil, reported a popular use of Cyperaceae species as antidote to snake bites. The plant may even have a hypotensive effect, though it was never properly researched. The in vitro inhibitory of the angiotensin converting enzyme (ACE) activity of eigth ethanolic extracts of Cyperaceae was evaluated by colorimetric assay. Total phenolic and flavonoids were determined using colorimetric assay. The hypotensive effect of the active specie (Rhychonospora exaltata, ERE) and the in vivo ACE assay was measured in vivo using male Wistar Kyoto (ERE, 0.01-100mg/kg), with acetylcholine (ACh) as positive control (5 µg/kg, i.v.). The evaluation of ACE in vivo inhibitory effect was performed comparing the mean arterial pressure before and after ERE (10 mg/kg) in animals which received injection of angiotensin I (ANG I; 0,03, 03 and 300 µg/kg, i.v.). Captopril (30 mg/kg) was used as positive control. Bulbostylis capillaris (86.89 ± 15.20%) and ERE (74.89 ± 11.95%, ERE) were considered active in the in vitro ACE inhibition assay, at 100 µg/mL concentration. ACh lead to a hypotensive effect before and after ERE's curve (-40±5% and -41±3%). ERE showed a dose-dependent hypotensive effect and a in vivo ACE inhibitory effect. Cyperaceae species showed an inhibitory activity of ACE, in vitro, as well as high content of total phenolic and flavonoids. ERE exhibited an inhibitory effect on both in vitro and in vivo ACE. The selection of species used in popular medicine as antidotes, along with the in vitro assay of ACE inhibition, might be a biomonitoring method for the screening of new medicinal plants with hypotensive properties.


Em 1820, o naturalista francês August Saint Hillaire, durante uma visita ao Espírito Santo (ES), Estado do sudeste do Brasil, relatou o uso popular de espécies de Cyperaceae como antídoto para picadas de cobra. As espécies podem possuir efeito hipotensor, embora nunca tenham sido devidamente pesquisadas. A inibição in vitro da atividade da enzima conversora da angiotensina (ECA) de oito extratos etanólicos de Cyperaceae foi avaliada por ensaio colorimétrico. Totais de fenólicos e flavonóides foram determinados utilizando ensaio colorimétrico. O efeito hipotensor da espécie ativa (Rhychonospora exaltata, ERE) no ensaio de ECA in vitro foi avaliada in vivo utilizando-se machos Wistar Kyoto (ERE, 0.01-100 mg/kg), com a acetilcolina (ACh), como controle positivo (5 µg/kg, iv). A avaliação do efeito inibidor da ECA in vivo foi realizado comparando-se a pressão arterial média, antes e após ERE (10 mg/kg) nos animais que receberam injeção de angiotensina I (Ang I, 0,03, 03 e 300 µg/kg, iv). Captopril (30 mg/kg) foi utilizado como controle positivo. Bulbostylis capillaris (86,89±15,20%) e ERE (74,89±11,95%, ERE) foram considerados ativas no ensaio de inibição da ECA in vitro, na concentração de 100 µg/mL. A ACh gerou um efeito hipotensor, antes e depois da curva de ERE (-40 ± 5% -41 ± 3%). ERE apresentou efeito hipotensivo dependente da dose e um efeito inibidor da ECA in vivo. As espécies de Cyperaceae mostraram uma atividade inibidora de ACE in vitro, bem como elevado conteúdo de substâncias fenólicas e flavonóides. ERE exibiu um efeito inibidor da ECA tanto in vitro como in vivo. A seleção das espécies utilizadas na medicina popular como antiofídicos, juntamente com o ensaio in vitro de inibição da ECA, pode ser um método de biomonitoramento para a seleção de novas plantas medicinais com propriedades hipotensores.


Asunto(s)
Ratas , Técnicas In Vitro , Cyperaceae/clasificación , Inhibidores de la Enzima Convertidora de Angiotensina/farmacocinética , Hipotensión
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