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1.
PLoS Genet ; 16(9): e1009028, 2020 09.
Artículo en Inglés | MEDLINE | ID: mdl-32986719

RESUMEN

Idiopathic hypocalcemia in Thoroughbred (TB) foals causes tetany and seizures and is invariably fatal. Based upon the similarity of this disease with human familial hypoparathyroidism and occurrence only in the TB breed, we conducted a genetic investigation on two affected TB foals. Familial hypoparathyroidism was identified, and pedigree analysis suggested an autosomal recessive (AR) mode of inheritance. We performed whole-genome sequencing of the two foals, their unaffected dams and four unaffected, unrelated TB horses. Both homozygosity mapping and an association analysis were used to prioritize potential genetic variants. Of the 2,808 variants that significantly associated with the phenotype using an AR mode of inheritance (P<0.02) and located within a region of homozygosity, 1,507 (54%) were located in a 9.7 Mb region on chr4 (44.9-54.6 Mb). Within this region, a nonsense variant (RAPGEF5 c.2624C>A,p.Ser875*) was significantly associated with the hypoparathyroid phenotype (Pallelic = 0.008). Affected foals were homozygous for the variant, with two additional affected foals subsequently confirmed in 2019. Necropsies of all affected foals failed to identify any histologically normal parathyroid glands. Because the nonsense mutation in RAPGEF5 was near the C-terminal end of the protein, the impact on protein function was unclear. Therefore, we tested the variant in our Xenopus overexpression model and demonstrated RAPGEF5 loss-of-function. This RAPGEF5 variant represents the first genetic variant for hypoparathyroidism identified in any domestic animal species.


Asunto(s)
Codón sin Sentido , Enfermedades de los Caballos/genética , Hipocalcemia/veterinaria , Hipoparatiroidismo/veterinaria , Factores de Intercambio de Guanina Nucleótido ras/genética , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Animales , Embrión no Mamífero , Femenino , Homocigoto , Enfermedades de los Caballos/etiología , Caballos , Hipocalcemia/genética , Hipocalcemia/patología , Hipoparatiroidismo/genética , Hipoparatiroidismo/patología , Masculino , Linaje , Secuenciación Completa del Genoma , Xenopus/embriología , Factores de Intercambio de Guanina Nucleótido ras/química
2.
RNA Biol ; 13(9): 861-71, 2016 09.
Artículo en Inglés | MEDLINE | ID: mdl-27362560

RESUMEN

Circular RNAs (circRNAs) constitute a large class of RNA species formed by the back-splicing of co-linear exons, often within protein-coding transcripts. Despite much progress in the field, it remains elusive whether the majority of circRNAs are merely aberrant splicing by-products with unknown functions, or their production is spatially and temporally regulated to carry out specific biological functions. To date, the majority of circRNAs have been cataloged in resting cells. Here, we identify an LPS-inducible circRNA: mcircRasGEF1B, which is predominantly localized in cytoplasm, shows cell-type specific expression, and has a human homolog with similar properties, hcircRasGEF1B. We show that knockdown of the expression of mcircRasGEF1B reduces LPS-induced ICAM-1 expression. Additionally, we demonstrate that mcircRasGEF1B regulates the stability of mature ICAM-1 mRNAs. These findings expand the inventory of functionally characterized circRNAs with a novel RNA species that may play a critical role in fine-tuning immune responses and protecting cells against microbial infection.


Asunto(s)
Regulación de la Expresión Génica , Molécula 1 de Adhesión Intercelular/genética , ARN/genética , Transducción de Señal , Receptor Toll-Like 4/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/genética , Animales , Secuencia de Bases , Línea Celular , Evolución Molecular , Humanos , Lipopolisacáridos/inmunología , Macrófagos/inmunología , Macrófagos/metabolismo , Ratones , FN-kappa B/metabolismo , Especificidad de Órganos/genética , Transporte de Proteínas , ARN/química , Estabilidad del ARN , ARN Circular , Factores de Intercambio de Guanina Nucleótido ras/química
4.
Nat Chem Biol ; 7(9): 585-7, 2011 Jul 17.
Artículo en Inglés | MEDLINE | ID: mdl-21765406
5.
FEBS J ; 278(10): 1651-61, 2011 May.
Artículo en Inglés | MEDLINE | ID: mdl-21385318

RESUMEN

The kinase noncatalytic C-lobe domain (KIND) is a putative protein-protein interaction module. Four KIND-containing proteins, Spir-2 (actin-nuclear factor), PTPN13 (protein tyrosine phosphatase), FRMPD2 (scaffold protein) and very-KIND (v-KIND) (brain-specific Ras guanine nucleotide exchange factor), have been identified to date. Uniquely, v-KIND has two KINDs (i.e. KIND1 and KIND2), whereas the other three proteins have only one. The functional role of KIND, however, remains unclear. We previously demonstrated that v-KIND interacts with the high-molecular weight microtubule-associated protein 2 (MAP2), a dendritic microtubule-associated protein, leading to negative regulation of neuronal dendrite growth. In the present study, we analyzed the structure-function relationships of the v-KIND-MAP2 interaction by generating a series of mutant constructs. The interaction with endogenous MAP2 in mouse cerebellar granule cells was specific to v-KIND KIND2, but not KIND1, and was not observed for the KINDs from other KIND-containing proteins. The binding core modules critical for the v-KIND-MAP2 interaction were defined within 32 residues of the mouse v-KIND KIND2 and 43 residues of the mouse MAP2 central domain. Three Leu residues at amino acid positions 461, 474 and 477 in the MAP2-binding core module of KIND2 contributed to the interaction. The MAP2-binding core module itself promoted dendrite branching as a dominant-negative regulator of v-KIND in hippocampal neurons. The results reported in the present study demonstrate the structural and functional determinant underlying the v-KIND-MAP2 interaction that controls dendrite arborization patterns.


Asunto(s)
Dendritas/fisiología , Hipocampo/citología , Proteínas Asociadas a Microtúbulos/metabolismo , Estructura Terciaria de Proteína , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Secuencia de Aminoácidos , Animales , Pollos , Humanos , Leucina/química , Ratones , Proteínas Asociadas a Microtúbulos/química , Neuronas/fisiología , Mapeo de Interacción de Proteínas , Proteína Tirosina Fosfatasa no Receptora Tipo 13/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/química
6.
Cell Signal ; 22(12): 1804-10, 2010 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-20478380

RESUMEN

Ras proteins function as molecular switches that are activated in response to signalling pathways initiated by various extracellular stimuli and subsequently bind to numerous effector proteins leading to the activation of several signalling cascades within the cell. Ras and Ras-related proteins belong to a large superfamily of small GTPases characterized by significant sequence and function similarities. Several evidence indicate the existence of complex signalling networks that link Ras with its relatives in the family. A key role in this cross-talk is played by guanine nucleotide exchange factors (GEFs) that serve both as regulators and as effectors of Ras family proteins. The members of the RalGDS family, RalGDS, RGL, RGL2/Rlf and RGL3, can interact with activated Ras through their Ras Binding Domain (RBD), but may function as effectors for other Ras family members. They possess a REM-CDC25 homology region like RasGEFs, but specifically activate only RalA and RalB and not Ras or other Ras-related small GTPases. In this review we provide an update on this recently discovered family of GEFs, highlighting their crucial role in coupling activated Ras to activation of Ral, thus regulating several fundamental cell processes, and also discussing some evidence supporting Ras-independent additional functions of RalGDS proteins.


Asunto(s)
Transducción de Señal/fisiología , Factor de Intercambio de Guanina Nucleótido ral/metabolismo , Animales , Secuencia de Bases , Factores de Intercambio de Guanina Nucleótido/metabolismo , Humanos , Proteínas de Unión al GTP Monoméricas/metabolismo , Proteínas/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/química , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Proteínas ras/metabolismo
7.
J Mol Biol ; 379(1): 51-63, 2008 May 23.
Artículo en Inglés | MEDLINE | ID: mdl-18440551

RESUMEN

Guanine nucleotide exchange factors (GEFs) regulate the activity of small G proteins by catalysing the intrinsically slow exchange of GDP for GTP. The mechanism involves the formation of trimeric G protein-nucleotide-GEF complexes, followed by the release of nucleotide to form stable binary G protein-GEF complexes. A number of structural studies of G protein-GEF complexes have shown large structural changes induced in the nucleotide binding site. Together with a recent structure of a trimeric complex, these studies have suggested not only some common principles but also large differences in detail in the GEF-mediated exchange reaction. Several structures suggested that a glutamic acid residue in switch II, which is part of the DxxGQE motif and highly conserved in Ras-like G proteins, might have a decisive mechanistic role in GEF-mediated nucleotide exchange reactions. Here we show that mutation of the switch II glutamate to Ala severely impairs GEF-catalysed nucleotide exchange in most, but not all, Ras family G proteins, explaining its high sequence conservation. The residue determines the initial approach of GEF to the nucleotide-loaded G protein and does not appreciably affect the formation of a binary nucleotide-free complex. Its major effect thus appears to be the removal of the P-loop lysine from its interaction with the nucleotide.


Asunto(s)
Ácido Glutámico/química , Factores de Intercambio de Guanina Nucleótido/química , Proteínas de Unión al GTP Monoméricas/química , Alanina/química , Secuencia de Aminoácidos , Sustitución de Aminoácidos , Sitios de Unión , Catálisis , Secuencia Conservada , Factores de Intercambio de Guanina Nucleótido/metabolismo , Humanos , Datos de Secuencia Molecular , Proteínas de Unión al GTP Monoméricas/metabolismo , Mutación , Factores de Intercambio de Guanina Nucleótido ras/química , Factores de Intercambio de Guanina Nucleótido ras/genética , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Proteínas ras/química , Proteínas ras/metabolismo
8.
Biochem Biophys Res Commun ; 348(3): 908-15, 2006 Sep 29.
Artículo en Inglés | MEDLINE | ID: mdl-16899220

RESUMEN

Mg2+ is essential for guanosine triphosphatase activity and plays key roles in guanine nucleotide binding and preserving the structural integrity of GTP-binding proteins. To understand the structural basis for Mg2+ function during the GDP/GTP exchange process, we determined the crystal structure of Delta9-Sar1-GDP at low Mg2+ concentration at 1.8A. Two Sar1-GDP molecules in the crystal form a dimer with Mg2+ presenting only in molecule B but not in molecule A. The absence of Mg2+ induces significant conformational changes in the switch I region in molecule A that shows similarities with those of Ha-Ras bound to Sos. The current structure reveals an important regulatory role for Mg2+. We suggest that guanine nucleotide exchange factor may utilize this feature to generate an open conformation for GDP/GTP exchange. Furthermore, we propose a mechanism for COPII assembly and disassembly in which dimerization of Sar1 plays an important role.


Asunto(s)
Guanosina Difosfato/química , Magnesio/química , Factores de Intercambio de Guanina Nucleótido ras/química , Proteínas ras/química , Animales , Vesículas Cubiertas por Proteínas de Revestimiento/metabolismo , Cricetinae , Cricetulus , Cristalización , Cristalografía por Rayos X , Dimerización , Guanosina Difosfato/metabolismo , Magnesio/fisiología , Conformación Proteica , Pliegue de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/fisiología , Proteínas ras/fisiología
9.
J Biol Chem ; 281(33): 23367-76, 2006 Aug 18.
Artículo en Inglés | MEDLINE | ID: mdl-16769729

RESUMEN

The regulation of cell polarity plays an important role in chemotaxis. GbpD, a putative nucleotide exchange factor for small G-proteins of the Ras family, has been implicated in adhesion, cell polarity, and chemotaxis in Dictyostelium. Cells overexpressing GbpD are flat, exhibit strongly increased cell-substrate attachment, and extend many bifurcated and lateral pseudopodia. These cells overexpressing GbpD are severely impaired in chemotaxis, most likely due to the induction of many protrusions rather than an enhanced adhesion. The GbpD-overexpression phenotype is similar to that of cells overexpressing Rap1. Here we demonstrate that GbpD activates Rap1 both in vivo and in vitro but not any of the five other characterized Ras proteins. In a screen for Rap1 effectors, we overexpressed GbpD in several mutants defective in adhesion or cell polarity and identified Phg2 as Rap1 effector necessary for adhesion, but not cell polarity. Phg2, a serine/threonine-specific kinase, directly interacts with Rap1 via its Ras association domain.


Asunto(s)
Polaridad Celular/fisiología , Dictyostelium/química , Transducción de Señal/fisiología , Proteínas de Unión al GTP rap1/química , Proteínas de Unión al GTP rap1/fisiología , Factores de Intercambio de Guanina Nucleótido ras/química , Animales , Adhesión Celular/genética , Adhesión Celular/fisiología , Línea Celular , Polaridad Celular/genética , Quimiotaxis/genética , Quimiotaxis/fisiología , Dictyostelium/genética , Dictyostelium/fisiología , Seudópodos/metabolismo , Seudópodos/fisiología , Transducción de Señal/genética , Proteínas de Unión al GTP rap1/genética , Factores de Intercambio de Guanina Nucleótido ras/genética , Factores de Intercambio de Guanina Nucleótido ras/fisiología
10.
J Biol Chem ; 281(15): 10598-609, 2006 Apr 14.
Artículo en Inglés | MEDLINE | ID: mdl-16423831

RESUMEN

E-cadherin is a key cell-cell adhesion molecule at adherens junctions (AJs) and undergoes endocytosis when AJs are disrupted by the action of an extracellular signal, such as hepatocyte growth factor (HGF)/scatter factor. Rab5 small G protein has been implicated in the HGF-induced endocytosis of E-cadherin, but the molecular mechanism for the regulation of Rab5 activity remains unknown. We first studied this mechanism by using the cell-free assay system for the endocytosis of E-cadherin of the AJ-enriched fraction from rat livers. HGF induced activation of Ras small G protein, which then bound to RIN2, a Rab5 GDP/GTP exchange factor with the Vps9p-like guanine nucleotide exchange factor and Ras association domains, and activated it. Activated RIN2 then activated Rab5, eventually inducing the endocytosis of E-cadherin. We then studied whether RIN2 was involved in the HGF-induced endocytosis of E-cadherin in intact Madin-Darby canine kidney cells. RIN2 localized at the cell-cell adhesion sites, and its guanine nucleotide exchange factor activity was required for the HGF-induced endocytosis of E-cadherin in Madin-Darby canine kidney cells. These results indicate that RIN2 connects Ras to Rab5 in the HGF-induced endocytosis of E-cadherin.


Asunto(s)
Cadherinas/química , Proteínas Portadoras/química , Factores de Intercambio de Guanina Nucleótido/química , Factor de Crecimiento de Hepatocito/metabolismo , Proteínas de Unión al GTP rab5/química , Factores de Intercambio de Guanina Nucleótido ras/química , Factores de Intercambio de Guanina Nucleótido ras/fisiología , Animales , Cadherinas/metabolismo , Adhesión Celular , Línea Celular , Citosol/metabolismo , Perros , Relación Dosis-Respuesta a Droga , Endocitosis , Vectores Genéticos , Glutatión Transferasa/metabolismo , Modelos Biológicos , Unión Proteica , Estructura Terciaria de Proteína , Interferencia de ARN , Ratas , Proteínas de Saccharomyces cerevisiae/metabolismo , Temperatura , Factores de Tiempo , Transfección , Proteínas de Transporte Vesicular/metabolismo
11.
Genome Biol ; 6(8): R68, 2005.
Artículo en Inglés | MEDLINE | ID: mdl-16086850

RESUMEN

BACKGROUND: Dictyostelium discoideum is a eukaryote with a simple lifestyle and a relatively small genome whose sequence has been fully determined. It is widely used for studies on cell signaling, movement and multicellular development. Ras guanine-nucleotide exchange factors (RasGEFs) are the proteins that activate Ras and thus lie near the top of many signaling pathways. They are particularly important for signaling in development and chemotaxis in many organisms, including Dictyostelium. RESULTS: We have searched the genome for sequences encoding RasGEFs. Despite its relative simplicity, we find that the Dictyostelium genome encodes at least 25 RasGEFs, with a few other genes encoding only parts of the RasGEF consensus domains. All appear to be expressed at some point in development. The 25 genes include a wide variety of domain structures, most of which have not been seen in other organisms. The LisH domain, which is associated with microtubule binding, is seen particularly frequently; other domains that confer interactions with the cytoskeleton are also common. Disruption of a sample of the novel genes reveals that many have clear phenotypes, including altered morphology and defects in chemotaxis, slug phototaxis and thermotaxis. CONCLUSION: These results suggest that the unexpectedly large number of RasGEF genes reflects an evolutionary expansion of the range of Ras signaling rather than functional redundancy or the presence of multiple pseudogenes.


Asunto(s)
Dictyostelium/genética , Genes Protozoarios/genética , Genoma de Protozoos/genética , Factores de Intercambio de Guanina Nucleótido ras/genética , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Actinas/genética , Animales , Dictyostelium/citología , Regulación del Desarrollo de la Expresión Génica , Vida Libre de Gérmenes , Movimiento , Mutación/genética , Fenotipo , Filogenia , Unión Proteica , Estructura Terciaria de Proteína , Análisis de Secuencia de ADN , Factores de Intercambio de Guanina Nucleótido ras/química , Proteínas de Unión al GTP rho/metabolismo
12.
Biochemistry ; 44(7): 2566-76, 2005 Feb 22.
Artículo en Inglés | MEDLINE | ID: mdl-15709769

RESUMEN

Ras GTPases function as binary switches in the signaling pathways controlling cell growth and differentiation by cycling between the inactive GDP-bound and the active GTP-bound states. They are activated through interaction with guanine nucleotide exchange factors (GEFs) that catalyze the exchange of bound GDP with cytosolic GTP. In a conventional scheme, the biochemical roles of GEFs are postulated as stimulating the release of the bound GDP and stabilizing a nucleotide-free transition state of Ras. Herein we have examined in detail the catalyzed GDP/GTP exchange reaction mechanism by a Ras specific GEF, GRF1. In the absence of free nucleotide, GRF1 could not efficiently stimulate GDP dissociation from Ras. The release of the Ras-bound GDP was dependent upon the concentration and the structure of the incoming nucleotide, in particular, the hydrophobicity of the beta and gamma phosphate groups, suggesting that the GTP binding step is a prerequisite for GDP dissociation, is the rate-limiting step in the GEF reaction, or both. Using a pair of fluorescent guanine nucleotides (N-methylanthraniloyl GDP and 2',3'-O-(2,4,6-trinitrocyclohexadienylidene)-GTP) as donor and acceptor probes, we were able to detect fluorescence resonance energy transfer between the incoming GTP and the departing GDP on Ras under controlled kinetic conditions, providing evidence that there may exist a novel intermediate of the GEF-Ras complex that transiently binds to two nucleotides simultaneously. Furthermore, we found that Ras was capable of binding pyrophosphate (PPi) with a dissociation constant of 26 microM and that PPi and GMP, but neither alone, synergistically potentiated the GRF1-stimulated GDP dissociation from Ras. These results strongly support a GEF reaction mechanism by which nucleotide exchange occurs on Ras through a direct GTP/GDP displacement model.


Asunto(s)
GTP Fosfohidrolasas/metabolismo , Guanosina Difosfato/análogos & derivados , Guanosina Difosfato/metabolismo , Guanosina Trifosfato/análogos & derivados , Guanosina Trifosfato/metabolismo , Modelos Biológicos , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Proteínas ras/metabolismo , ras-GRF1/metabolismo , Sitios de Unión , Catálisis , Difosfatos/metabolismo , Transferencia Resonante de Energía de Fluorescencia , GTP Fosfohidrolasas/química , Nucleótidos de Guanina/metabolismo , Guanosina Difosfato/química , Guanosina Trifosfato/química , Unión Proteica , ortoaminobenzoatos/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/química , Proteínas ras/química , ras-GRF1/química
13.
Novartis Found Symp ; 271: 54-68; discussion 68-77, 95-9, 2005.
Artículo en Inglés | MEDLINE | ID: mdl-16605128

RESUMEN

The nucleotide sequences of the mouse, rat and human cDNAs and genes that encode the fourth member of the Ras guanine nucleotide releasing protein (RasGRP) family of signalling proteins have been deduced. RasGRP4 is a mast cell-restricted, cation-dependent, guanine nucleotide exchange factor (GEF). It is also a diacylglycerol (DAG)/phorbol ester receptor that plays a prominent role in dictating which protease and eicosanoid mediators are expressed in rodent and human mast cell lines. RasGRP4 appears to act downstream of the tyrosine kinase receptor c-Kt/CD117 and upstream of the basic-helix-loop-helix-leucine zipper transcription factor MITE Allelic variants of RasGRP4 have been identified, as have functionally different isoforms that are the result of variable splicing of its gene. Earlier gene-linkage studies revealed a site on chromosome 7A3-B1 that controls intrinsic airway reactivity to methacholine in backcrossed C3H/HeJ and A/J mice. The 18-exon mouse RasGRP4 gene resides on chromosome 7A3-B1, and recent studies revealed that the mast cells developed from the hyporesponsive C3H/HeJ mouse strain preferentially produce a defective isoform of RasGRP4. These and other data suggest that RasGRP4 is of critical importance in mast cell development and that the expression of abnormal isoforms of the protein can lead to mast cell dysfunction.


Asunto(s)
Susceptibilidad a Enfermedades , Mastocitos/metabolismo , Transducción de Señal/fisiología , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Secuencia de Aminoácidos , Animales , Linfocitos B/metabolismo , Plaquetas/metabolismo , Caenorhabditis elegans , Proteínas de Caenorhabditis elegans/genética , Proteínas de Caenorhabditis elegans/metabolismo , Humanos , Ratones , Ratones Endogámicos , Modelos Moleculares , Datos de Secuencia Molecular , Conformación Proteica , Proteínas Proto-Oncogénicas c-kit/genética , Proteínas Proto-Oncogénicas c-kit/metabolismo , Alineación de Secuencia , Linfocitos T/metabolismo , Distribución Tisular , Factores de Intercambio de Guanina Nucleótido ras/química , Factores de Intercambio de Guanina Nucleótido ras/genética
14.
Artículo en Inglés | MEDLINE | ID: mdl-12102558

RESUMEN

GTPases of the Ras subfamily regulate a diverse array of cellular-signaling pathways, coupling extracellular signals to the intracellular response machinery. Guanine nucleotide exchange factors (GEFs) are primarily responsible for linking cell-surface receptors to Ras protein activation. They do this by catalyzing the dissociation of GDP from the inactive Ras proteins. GTP can then bind and induce a conformational change that permits interaction with downstream effectors. Over the past 5 years, approximately 20 novel Ras-family GEFs have been identified and characterized. These data indicate that a variety of different signaling mechanisms can be induced to activate Ras, enabling tyrosine kinases, G-protein-coupled receptors, adhesion molecules, second messengers, and various protein-interaction modules to relocate and/or activate GEFs and elevate intracellular Ras-GTP levels. This review discusses the structure and function of the catalytic or CDC25 homology domain common to almost all Ras-family GEFs. It also details our current knowledge about the regulation and function of this rapidly growing family of enzymes that include Sos1 and 2, GRF1 and 2, CalDAG-GEF/GRP1-4, C3G, cAMP-GEF/Epac 1 and 2, PDZ-GEFs, MR-GEF, RalGDS family members, RalGPS, BCAR3, Smg GDS, and phospholipase C(epsilon).


Asunto(s)
Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Proteínas ras/metabolismo , Secuencia de Aminoácidos , Animales , Activación Enzimática , Humanos , Datos de Secuencia Molecular , Neoplasias/etiología , Estructura Terciaria de Proteína , Homología de Secuencia de Aminoácido , Proteínas Activadoras de ras GTPasa/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/química , Factores de Intercambio de Guanina Nucleótido ras/genética , ras-GRF1/química , ras-GRF1/genética , ras-GRF1/metabolismo
15.
Nat Cell Biol ; 4(4): 294-301, 2002 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-11912491

RESUMEN

Regulation of the actin cytoskeleton by microtubules is mediated by the Rho family GTPases. However, the molecular mechanisms that link microtubule dynamics to Rho GTPases have not, as yet, been identified. Here we show that the Rho guanine nucleotide exchange factor (GEF)-H1 is regulated by an interaction with microtubules. GEF-H1 mutants that are deficient in microtubule binding have higher activity levels than microtubule-bound forms. These mutants also induce Rho-dependent changes in cell morphology and actin organization. Furthermore, drug-induced microtubule depolymerization induces changes in cell morphology and gene expression that are similar to the changes induced by the expression of active forms of GEF-H1. Furthermore, these effects are inhibited by dominant-negative versions of GEF-H1. Thus, GEF-H1 links changes in microtubule integrity to Rho-dependent regulation of the actin cytoskeleton.


Asunto(s)
Actinas/metabolismo , Factores de Intercambio de Guanina Nucleótido/química , Factores de Intercambio de Guanina Nucleótido/metabolismo , Microtúbulos/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/química , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Animales , Células COS , ADN Complementario/metabolismo , Relación Dosis-Respuesta a Droga , Regulación de la Expresión Génica , Genes Reporteros , Nucleótidos de Guanina , Células HeLa , Humanos , Microscopía Fluorescente , Proteínas Asociadas a Microtúbulos/metabolismo , Modelos Genéticos , Plásmidos/metabolismo , Pruebas de Precipitina , Estructura Terciaria de Proteína , Factores de Intercambio de Guanina Nucleótido Rho , Factores de Tiempo , Transfección , Proteína de Unión al GTP cdc42/metabolismo , Proteína de Unión al GTP rac1/metabolismo , Proteínas Activadoras de ras GTPasa/metabolismo , Proteína de Unión al GTP rhoA/metabolismo
16.
Mol Cell Biol ; 22(8): 2498-504, 2002 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-11909944

RESUMEN

The mammalian Grf1 and Grf2 proteins are Ras guanine nucleotide exchange factors (GEFs) sharing a high degree of structural homology, as well as an elevated expression level in central nervous system tissues. Such similarities raise questions concerning the specificity and/or redundancy at the functional level between the two Grf proteins. grf1-null mutant mice have been recently described which showed phenotypic growth reduction and long-term memory loss. To gain insight into the in vivo function of Grf2, we disrupted its catalytic CDC25-H domain by means of gene targeting. Breeding among grf2(+/-) animals gave rise to viable grf2(-/-) adult animals with a normal Mendelian pattern, suggesting that Grf2 is not essential for embryonic and adult mouse development. In contrast to Grf1-null mice, analysis of grf2(-/-) litters showed similar size and weight as their heterozygous or wild-type grf2 counterparts. Furthermore, adult grf2(-/-) animals reached sexual maturity at the same age as their wild-type littermates and showed similar fertility levels. No specific pathology was observed in adult Grf2-null animals, and histopathological studies showed no observable differences between null mutant and wild-type Grf2 mice. These results indicate that grf2 is dispensable for mouse growth, development, and fertility. Furthermore, analysis of double grf1/grf2 null animals did not show any observable phenotypic difference with single grf1(-/-) animals, further indicating a lack of functional overlapping between the two otherwise highly homologous Grf1 and Grf2 proteins.


Asunto(s)
Factores de Intercambio de Guanina Nucleótido ras/deficiencia , Factores de Intercambio de Guanina Nucleótido ras/genética , Animales , Encéfalo/metabolismo , Femenino , Fertilidad , Marcación de Gen , Crecimiento , Heterocigoto , Masculino , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Fenotipo , Estructura Terciaria de Proteína , Maduración Sexual , Factores de Intercambio de Guanina Nucleótido ras/química , Factores de Intercambio de Guanina Nucleótido ras/fisiología , ras-GRF1/deficiencia , ras-GRF1/genética , ras-GRF1/fisiología
17.
J Biol Chem ; 276(50): 46995-7003, 2001 Dec 14.
Artículo en Inglés | MEDLINE | ID: mdl-11598133

RESUMEN

Cyclic nucleotide ras GEF (CNrasGEF) is a guanine-nucleotide exchange factor previously isolated in a screen for Nedd4-WW domain interacting proteins (Pham, N., Cheglakov, I., Koch, C. A., de Hoog, C. L., Moran, M. F., and Rotin, D. (2000) Curr. Biol. 10, 555-558). It activates Ras in a cAMP-dependent manner and Rap-1 independent of cAMP. Here we show that CNrasGEF is a likely substrate of the ubiquitin protein ligase Nedd4. CNrasGEF possesses two PY motifs at its C terminus that are responsible for binding to Nedd4 in vitro. Moreover, Nedd4 and CNrasGEF co-immunoprecipitate from 293T cells expressing ectopic CNrasGEF and endogenous Nedd4, and this co-immunoprecipitation is abrogated in PY motif-mutated CNrasGEF (CNrasGEFDelta2PY). CNrasGEF is ubiquitinated in cells, and this ubiquitination is augmented upon overexpression of wt-Nedd4 but is inhibited in cells overexpressing a catalytically inactive Nedd4 (Nedd4(CS)) or in cells expressing CNrasGEFDelta2PY, which cannot bind Nedd4. Moreover, pulse-chase experiments have demonstrated that the half-life of CNrasGEF is reduced 5-fold (from approximately 10 to approximately 2 h) in cells co-expressing Nedd4 with CNrasGEF but not with CNrasGEFDelta2PY (t(0.5) approximately 14 h). CNrasGEF is also stabilized in cells co-expressing Nedd4(CS) or following treatment with lactacystin, indicating proteasomal degradation of this protein. Deletion/mutation of the CDC25 domain to abrogate Ras (or Rap-1) binding leads to impaired ubiquitination of CNrasGEF, suggesting that such binding is critical for ubiquitination. Treatment of cells with the cAMP analogue 8-bromo-cAMP does not affect the ability of CNrasGEF to bind Nedd4 nor its level of ubiquitination, suggesting that Ras binding per se and not its activation is the critical step in triggering ubiquitination of CNrasGEF. These results suggest that CNrasGEF is a substrate for Nedd4, which regulates its ubiquitination and stability in cells.


Asunto(s)
Acetilcisteína/análogos & derivados , Proteínas de Unión al Calcio/metabolismo , Proteínas de Unión al Calcio/fisiología , Factores de Intercambio de Guanina Nucleótido/química , Factores de Intercambio de Guanina Nucleótido/metabolismo , Ligasas/metabolismo , Ligasas/fisiología , Proteínas del Tejido Nervioso , Nucleótidos Cíclicos/metabolismo , Ubiquitina-Proteína Ligasas , Ubiquitina/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/química , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , 8-Bromo Monofosfato de Adenosina Cíclica/metabolismo , Acetilcisteína/farmacología , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Catálisis , Línea Celular , AMP Cíclico/metabolismo , Cisteína Endopeptidasas/metabolismo , Complejos de Clasificación Endosomal Requeridos para el Transporte , Activación Enzimática , Eliminación de Gen , Glutatión Transferasa/metabolismo , Humanos , Datos de Secuencia Molecular , Complejos Multienzimáticos/metabolismo , Mutación , Ubiquitina-Proteína Ligasas Nedd4 , Plásmidos/metabolismo , Pruebas de Precipitina , Complejo de la Endopetidasa Proteasomal , Unión Proteica , Conformación Proteica , Estructura Terciaria de Proteína , Proteínas Recombinantes de Fusión/metabolismo , Homología de Secuencia de Aminoácido , Factores de Tiempo , Transfección , Proteínas ras/metabolismo
18.
J Biol Chem ; 276(41): 38029-35, 2001 Oct 12.
Artículo en Inglés | MEDLINE | ID: mdl-11500499

RESUMEN

Ras-GRF1 and Ras-GRF2 constitute a family of calmodulin-regulated guanine-nucleotide exchange factors (GEFs) that activate Ras proteins. Here we show that whereas Ras-GRF1 activated both Ha-Ras and R-Ras in cells, Ras-GRF2 activated only Ha-Ras. The inability of Ras-GRF2 to activate R-Ras was the consequence of the GTPase being post-translationally modified, since Ras-GRF2 activated unprocessed R-Ras as effectively as unprocessed Ha-Ras when assays were performed either in vivo or in vitro. Moreover, Ras-GRF2 failed to activate fully processed R-Ras in vitro. The particular C-terminal lipid attached to the GTPases played an important role in determining signaling specificity, since R-Ras became more responsive to Ras-GRF2 when it was farnesylated instead of geranylgeranylated. Similarly, Ha-Ras became less responsive to Ras-GRF2 when it was geranylgeranylated instead of farnesylated. Analysis of chimeras between Ras-GRF1 and Ras-GRF2 demonstrated that a 30-amino acid segment embedded with their catalytic domains was responsible for recognizing the presence of different lipids on Ras proteins. These results indicate that the specific lipid moiety attached to GTPases can contribute to signaling specificity of Ras-GEFs.


Asunto(s)
GTP Fosfohidrolasas/metabolismo , Prenilación de Proteína , Transducción de Señal , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , ras-GRF1/metabolismo , Secuencia de Aminoácidos , Animales , Dominio Catalítico , Línea Celular , Humanos , Datos de Secuencia Molecular , Procesamiento Proteico-Postraduccional , Factores de Intercambio de Guanina Nucleótido ras/química , ras-GRF1/química
19.
J Biol Chem ; 275(45): 34901-8, 2000 Nov 10.
Artículo en Inglés | MEDLINE | ID: mdl-10934204

RESUMEN

Although the Ras subfamily of GTPases consists of approximately 20 members, only a limited number of guanine nucleotide exchange factors (GEFs) that couple extracellular stimuli to Ras protein activation have been identified. Furthermore, no novel downstream effectors have been identified for the M-Ras/R-Ras3 GTPase. Here we report the identification and characterization of three Ras family GEFs that are most abundantly expressed in brain. Two of these GEFs, MR-GEF (M-Ras-regulated GEF, KIAA0277) and PDZ-GEF (KIAA0313) bound specifically to nucleotide-free Rap1 and Rap1/Rap2, respectively. Both proteins functioned as Rap1 GEFs in vivo. A third GEF, GRP3 (KIAA0846), activated both Ras and Rap1 and shared significant sequence homology with the calcium- and diacylglycerol-activated GEFs, GRP1 and GRP2. Similarly to previously identified Rap GEFs, C3G and Smg GDS, each of the newly identified exchange factors promoted the activation of Elk-1 in the LNCaP prostate tumor cell line where B-Raf can couple Rap1 to the extracellular receptor-activated kinase cascade. MR-GEF and PDZ-GEF both contain a region immediately N-terminal to their catalytic domains that share sequence homology with Ras-associating or RalGDS/AF6 homology (RA) domains. By searching for in vitro interaction with Ras-GTP proteins, PDZ-GEF specifically bound to Rap1A- and Rap2B-GTP, whereas MR-GEF bound to M-Ras-GTP. C-terminally truncated MR-GEF, lacking the GEF catalytic domain, retained its ability to bind M-Ras-GTP, suggesting that the RA domain is important for this interaction. Co-immunoprecipitation studies confirmed the interaction of M-Ras-GTP with MR-GEF in vivo. In addition, a constitutively active M-Ras(71L) mutant inhibited the ability of MR-GEF to promote Rap1A activation in a dose-dependent manner. These data suggest that M-Ras may inhibit Rap1 in order to elicit its biological effects.


Asunto(s)
Proteínas de Unión al ADN , Factores de Intercambio de Guanina Nucleótido/química , Factores de Intercambio de Guanina Nucleótido/metabolismo , Proteínas del Tejido Nervioso , Factores de Transcripción , Proteínas de Unión al GTP rap1/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Secuencia de Aminoácidos , Northern Blotting , Encéfalo/metabolismo , Calcio/metabolismo , Dominio Catalítico , Línea Celular , ADN Complementario/metabolismo , Diglicéridos/metabolismo , Relación Dosis-Respuesta a Droga , Activación Enzimática , Humanos , Datos de Secuencia Molecular , Mutagénesis , Plásmidos/metabolismo , Pruebas de Precipitina , Unión Proteica , Estructura Terciaria de Proteína , Proteínas Proto-Oncogénicas/metabolismo , Proteínas Proto-Oncogénicas c-raf/metabolismo , Receptores Citoplasmáticos y Nucleares/metabolismo , Homología de Secuencia de Aminoácido , Distribución Tisular , Células Tumorales Cultivadas , Proteína Elk-1 con Dominio ets , Proteínas de Unión al GTP rap/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/química
20.
EMBO J ; 19(6): 1263-71, 2000 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-10716926

RESUMEN

We recently identified intersectin, a protein containing two EH and five SH3 domains, as a component of the endocytic machinery. The N-terminal SH3 domain (SH3A), unlike other SH3 domains from intersectin or various endocytic proteins, specifically inhibits intermediate events leading to the formation of clathrin-coated pits. We have now identified a brain-enriched, 170 kDa protein (p170) that interacts specifically with SH3A. Screening of combinatorial peptides reveals the optimal ligand for SH3A as Pp(V/I)PPR, and the 170 kDa mammalian son-of-sevenless (mSos1) protein, a guanine-nucleotide exchange factor for Ras, con- tains two copies of the matching sequence, PPVPPR. Immunodepletion studies confirm that p170 is mSos1. Intersectin and mSos1 are co-enriched in nerve terminals and are co-immunoprecipitated from brain extracts. SH3A competes with the SH3 domains of Grb2 in binding to mSos1, and the intersectin-mSos1 complex can be separated from Grb2 by sucrose gradient centrifugation. Overexpression of the SH3 domains of intersectin blocks epidermal growth factor-mediated Ras activation. These results suggest that intersectin functions in cell signaling in addition to its role in endocytosis and may link these cellular processes.


Asunto(s)
Proteínas Adaptadoras Transductoras de Señales , Proteínas Adaptadoras del Transporte Vesicular , Encéfalo/metabolismo , Proteínas Portadoras/metabolismo , Endosomas/química , Proteína SOS1/metabolismo , Factores de Intercambio de Guanina Nucleótido ras/metabolismo , Secuencia de Aminoácidos , Animales , Unión Competitiva , Encéfalo/citología , Encéfalo/embriología , Secuencia de Consenso , Activación Enzimática/efectos de los fármacos , Factor de Crecimiento Epidérmico/antagonistas & inhibidores , Factor de Crecimiento Epidérmico/farmacología , Proteína Adaptadora GRB2 , Datos de Secuencia Molecular , Peso Molecular , Neuronas/química , Neuronas/citología , Neuronas/metabolismo , Unión Proteica , Proteínas/antagonistas & inhibidores , Proteínas/metabolismo , Proteínas Proto-Oncogénicas p21(ras)/química , Proteínas Proto-Oncogénicas p21(ras)/metabolismo , Ratas , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/metabolismo , Proteína SOS1/química , Factores de Intercambio de Guanina Nucleótido ras/química , Dominios Homologos src/genética , Dominios Homologos src/fisiología
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