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1.
Plant Cell Rep ; 43(6): 147, 2024 May 21.
Artículo en Inglés | MEDLINE | ID: mdl-38771491

RESUMEN

KEY MESSAGE: Thchit42 constitutive expression for fungal resistance showed synchronisation with leaf augmentation and transcriptome analysis revealed the Longifolia and Zinc finger RICESLEEPER gene is responsible for plant growth and development. Pelargonium graveolens essential oil possesses significant attributes, known for perfumery and aromatherapy. However, optimal yield and propagation are predominantly hindered by biotic stress. All biotechnological approaches have yet to prove effective in addressing fungal resistance. The current study developed transgenic geranium bridging molecular mechanism of fungal resistance and plant growth by introducing cassette 35S::Thchit42. Furthermore, 120 independently putative transformed explants were regenerated on kanamycin fortified medium. Primarily transgenic lines were demonstrated peak pathogenicity and antifungal activity against formidable Colletotrichum gloeosporioides and Fusarium oxysporum. Additionally, phenotypic analysis revealed ~ 2fold increase in leaf size and ~ 2.1fold enhanced oil content. To elucidate the molecular mechanisms for genotypic cause, de novo transcriptional profiles were analyzed to indicate that the auxin-regulated longifolia gene is accountable for augmentation in leaf size, and zinc finger (ZF) RICESLEEPER attributes growth upregulation. Collectively, data provides valuable insights into unravelling the mechanism of Thchit42-mediated crosstalk between morphological and chemical alteration in transgenic plants. This knowledge might create novel opportunities to cultivate fungal-resistant geranium throughout all seasons to fulfil demand.


Asunto(s)
Resistencia a la Enfermedad , Fusarium , Regulación de la Expresión Génica de las Plantas , Pelargonium , Hojas de la Planta , Plantas Modificadas Genéticamente , Pelargonium/genética , Fusarium/patogenicidad , Fusarium/fisiología , Resistencia a la Enfermedad/genética , Hojas de la Planta/genética , Hojas de la Planta/microbiología , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Enfermedades de las Plantas/microbiología , Enfermedades de las Plantas/genética , Colletotrichum/patogenicidad , Colletotrichum/fisiología , Aceites Volátiles/metabolismo , Aceites Volátiles/farmacología , Geranium/genética
2.
Genes (Basel) ; 12(5)2021 05 13.
Artículo en Inglés | MEDLINE | ID: mdl-34068148

RESUMEN

Breeding programs in ornamentals can be facilitated by integrating knowledge of phylogenetic relatedness of potential parents along with other genomic information. Using AFLP, genetic distances were determined for 59 Geranium genotypes, comprising 55 commercial cultivars of the three subgenera of a total collection of 61 Geranium genotypes. A subgroup of 45 genotypes, including intragroup and intergroup hybrids, were selected and further characterized for genome sizes and chromosome numbers. The variation in genome size ranged from 1.51 ± 0.01 pg/2C to 12.94 ± 0.07 pg/2C. The chromosome numbers ranged from 26 to 108-110 with some hybrids showing an aberrant number of chromosomes based on their parents' constitution. All chromosome numbers of Geranium are an even number, which presumes that unreduced gametes occur in some cross combinations. Overall, parental difference in genome size and chromosome number were not limiting for cross compatibility. Good crossing compatibility was correlated to a Jaccard similarity coefficient as parameter for parental relatedness of about 0.5. Additionally, parent combinations with high differences in the DNA/chromosome value could not result in a successful cross. We expect that our results will enable breeding programs to overcome crossing barriers and support further breeding initiatives.


Asunto(s)
Cromosomas de las Plantas/genética , Tamaño del Genoma , Geranium/genética , Fitomejoramiento/métodos , Polimorfismo Genético , Hibridación Genética
3.
Genes Genet Syst ; 96(2): 99-104, 2021 Jul 14.
Artículo en Inglés | MEDLINE | ID: mdl-33883325

RESUMEN

Nuclear microsatellite markers were developed for Geranium thunbergii, an herbaceous plant characterized by petal color polymorphism. Utilizing RNA sequencing data obtained by next-generation sequencing techniques, we developed and characterized 19 polymorphic microsatellite markers with two to 12 alleles in the nuclear genome. These markers will be used to reveal the genetic structure and demographic history of G. thunbergii in the Japanese archipelago, which will elucidate the genetic background of flower color polymorphism among populations.


Asunto(s)
Geranium/genética , Repeticiones de Microsatélite , Pigmentación , Polimorfismo Genético , Flores/genética , Flores/metabolismo , Antecedentes Genéticos , Fitomejoramiento/métodos , Fitomejoramiento/normas , Estándares de Referencia
4.
Plant Dis ; 105(1): 207-208, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33175669

RESUMEN

Ralstonia solanacearum phylotype II sequevar 1 (RsII-1, formerly race 3 biovar 2) causes tomato bacterial wilt, potato brown rot, and Southern wilt of geranium. Strains in RsII-1 cause wilting in potato and tomato at cooler temperatures than tropical lowland R. solanacearum strains. Although periodically introduced, RsII-1 has not established in the United States. This pathogen is of quarantine concern and listed as a Federal Select Agent. We report a rapidly sequenced (<2 days) draft genome of UW848, a RsII-1 isolate introduced to the United States in geranium cuttings in spring 2020. UW848 belongs to the near-clonal cluster of RsII-1 global pandemic strains.


Asunto(s)
Geranium , Ralstonia solanacearum , Solanum lycopersicum , Solanum tuberosum , Geranium/genética , Enfermedades de las Plantas , Ralstonia solanacearum/genética , Estados Unidos
5.
FEBS Lett ; 593(16): 2235-2249, 2019 08.
Artículo en Inglés | MEDLINE | ID: mdl-31210363

RESUMEN

This study aimed to explore the noncoding RNAs, which have emerged as key regulatory molecules in biological processes, in rose-scented geranium. We analyzed RNA-seq data revealing 26 784 long noncoding RNAs (lncRNAs) and 871 miRNAs in rose-scented geranium. A total of 466 lncRNAs were annotated using different plant lncRNA public databases. Furthermore, 372 lncRNAs and 99 miRNAs were detected that target terpene and tartarate biosynthetic pathways. An interactome, comprising of lncRNAs, miRNAs, and mRNAs, was constructed that represents a noncoding RNA regulatory network of the target mRNAs. Real-time quantitative PCR expression validation was done for selected lncRNAs involved in the regulation of terpene and tartaric acid pathways. This study provides the first insights into the regulatory functioning of noncoding RNAs in rose-scented geranium.


Asunto(s)
Vías Biosintéticas , Perfilación de la Expresión Génica/métodos , Geranium/metabolismo , MicroARNs/genética , ARN Largo no Codificante/genética , Regulación de la Expresión Génica de las Plantas , Redes Reguladoras de Genes , Geranium/genética , Anotación de Secuencia Molecular , Reacción en Cadena en Tiempo Real de la Polimerasa , Análisis de Secuencia de ARN , Tartratos/metabolismo , Terpenos/metabolismo
6.
Nat Commun ; 10(1): 1564, 2019 04 05.
Artículo en Inglés | MEDLINE | ID: mdl-30952863

RESUMEN

Plant-soil feedbacks contribute to vegetation dynamics by species-specific interactions between plants and soil biota. Variation in plant-soil feedbacks can be predicted by root traits, successional position, and plant nativeness. However, it is unknown whether closely related plant species develop more similar plant-soil feedbacks than more distantly related species. Where previous comparisons included plant species from distant phylogenetic positions, we studied plant-soil feedbacks of congeneric species. Using eight intra-continentally range-expanding and native Geranium species, we tested relations between phylogenetic distances, chemical and structural root traits, root microbiomes, and plant-soil feedbacks. We show that root chemistry and specific root length better predict bacterial and fungal community composition than phylogenetic distance. Negative plant-soil feedback strength correlates with root-feeding nematode numbers, whereas microbiome dissimilarity, nativeness, or phylogeny does not predict plant-soil feedbacks. We conclude that root microbiome variation among congeners is best explained by root traits, and that root-feeding nematode abundances predict plant-soil feedbacks.


Asunto(s)
Geranium/fisiología , Herbivoria/fisiología , Suelo , Animales , Geranium/genética , Geranium/microbiología , Microbiota , Nematodos/fisiología , Filogenia , Raíces de Plantas/genética , Raíces de Plantas/microbiología , Raíces de Plantas/fisiología , Rizosfera
7.
Plant Biol (Stuttg) ; 21(2): 278-283, 2019 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-30253017

RESUMEN

DNA methylation is an important epigenetic mechanism regulating gene expression in plants. DNA methylation has been shown to vary among species and also among plant tissues. However, no study has evaluated whether arbuscular mycorrhizal (AM) fungi affect DNA methylation levels in a tissue-specific manner. We investigated whether symbiosis with AM fungi affects DNA methylation in the host, focusing on different plant tissues (roots versus leaves) and across time. We carried out a 6-month pot experiment using Geranium robertianum in symbiosis with the AM fungus Funneliformis mosseae. Our results show that the pattern of total DNA methylation differed between leaves and roots and was related to when plants were harvested, confirming that DNA methylation is a process that occurs dynamically throughout an organism's lifetime. More importantly, the presence of AM fungus in roots of our experimental plants had a positive effect on total DNA methylation in both tissues. This study shows that colonisation by AM fungi can affect DNA methylation levels in their hosts and that plant DNA methylation varies in an age- and tissue-specific manner.


Asunto(s)
Metilación de ADN , ADN de Plantas/genética , Micorrizas/fisiología , Geranium/genética , Geranium/microbiología , Glomeromycota/genética , Glomeromycota/fisiología , Micorrizas/genética , Hojas de la Planta/genética , Raíces de Plantas/genética , Raíces de Plantas/microbiología
8.
Microsc Res Tech ; 81(12): 1520-1532, 2018 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-30451350

RESUMEN

Macro and micromorphology of different parts that is, sepals, petals, flowers, indumentum, and leaf shape of 22 Geranium L. taxa from Iran were studied. These taxa representing the eight sections of the genus as sect. Dissecta, sect. Geranium, and sect. Tuberosa (of subgen. Geranium); sect. Batrachioidea, sect. Divaricata, sect. Lucida, sect. Ruberta and sect. Trilopha (of subgen. Robertium), that were collected from different geographical habitats of Iran. The biometric study involved 27 quantitative and 33 qualitative characters which were studied by use of stereomicroscopy and scanning electron microscopy (SEM). Statistical analyses were done by use of PAST software. Principal Component Analysis defined the most variable characters. Results showed that the diagnostic features were; length, width, apex of sepals, petals, trichomes type in pedicles and sepals along with their density, the shape length and width of leaves. In general, the present study revealed that the species could be differentiated by macro and micro-morphological characters. Taxa of two subgenera were clearly separated based on selected characters. These characters were found useful for the taxonomic identification and species delimitation in almost all taxa studied at the sub generic level, although some species of section Geranium and section Dissecta are mixed and nested in both subgenea.


Asunto(s)
Geranium/clasificación , Microscopía Electrónica de Rastreo/métodos , Flores/anatomía & histología , Flores/clasificación , Flores/ultraestructura , Geranium/anatomía & histología , Geranium/genética , Geranium/ultraestructura , Filogenia , Hojas de la Planta/anatomía & histología , Hojas de la Planta/clasificación , Hojas de la Planta/ultraestructura
9.
Mol Biol Rep ; 45(3): 315-326, 2018 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-29546478

RESUMEN

Rose-scented geranium (Pelargonium sp.) is widely known as aromatic and medicinal herb, accumulating specialized metabolites of high economic importance, such as essential oils, ascorbic acid, and tartaric acid. Ascorbic acid and tartaric acid are multifunctional metabolites of human value to be used as vital antioxidants and flavor enhancing agents in food products. No information is available related to the structural and functional properties of the enzymes involved in ascorbic acid and tartaric acid biosynthesis in rose-scented geranium. In the present study, transcriptome mining was done to identify full-length genes, followed by their bioinformatic and molecular modeling investigations and understanding of in silico structural and functional properties of these enzymes. Evolutionary conserved domains were identified in the pathway enzymes. In silico physicochemical characterization of the catalytic enzymes revealed isoelectric point (pI), instability index, aliphatic index, and grand average hydropathy (GRAVY) values of the enzymes. Secondary structural prediction revealed abundant proportion of alpha helix and random coil confirmations in the pathway enzymes. Three-dimensional homology models were developed for these enzymes. The predicted structures showed significant structural similarity with their respective templates in root mean square deviation analysis. Ramachandran plot analysis of the modeled enzymes revealed that more than 84% of the amino acid residues were within the favored regions. Further, functionally important residues were identified corresponding to catalytic sites located in the enzymes. To, our best knowledge, this is the first report which provides a foundation on functional annotation and structural determination of ascorbic acid and tartaric acid pathway enzymes in rose-scanted geranium.


Asunto(s)
Ácido Ascórbico/biosíntesis , Geranium/genética , Geranium/metabolismo , Tartratos/metabolismo , Antioxidantes/metabolismo , Ácido Ascórbico/genética , Biología Computacional/métodos , Simulación por Computador , Bases de Datos Genéticas , Aceites Volátiles/metabolismo , Filogenia , Aceites de Plantas/metabolismo , Homología Estructural de Proteína , Transcriptoma/genética
10.
Genome Biol Evol ; 9(6): 1766-1780, 2017 06 01.
Artículo en Inglés | MEDLINE | ID: mdl-28854633

RESUMEN

Geraniaceae have emerged as a model system for investigating the causes and consequences of variation in plastid and mitochondrial genomes. Incredible structural variation in plastid genomes (plastomes) and highly accelerated evolutionary rates have been reported in selected lineages and functional groups of genes in both plastomes and mitochondrial genomes (mitogenomes), and these phenomena have been implicated in cytonuclear incompatibility. Previous organelle genome studies have included limited sampling of Geranium, the largest genus in the family with over 400 species. This study reports on rates and patterns of nucleotide substitutions in plastomes and mitogenomes of 17 species of Geranium and representatives of other Geraniaceae. As detected across other angiosperms, substitution rates in the plastome are 3.5 times higher than the mitogenome in most Geranium. However, in the branch leading to Geranium brycei/Geranium incanum mitochondrial genes experienced significantly higher dN and dS than plastid genes, a pattern that has only been detected in one other angiosperm. Furthermore, rate accelerations differ in the two organelle genomes with plastomes having increased dN and mitogenomes with increased dS. In the Geranium phaeum/Geranium reflexum clade, duplicate copies of clpP and rpoA genes that experienced asymmetric rate divergence were detected in the single copy region of the plastome. In the case of rpoA, the branch leading to G. phaeum/G. reflexum experienced positive selection or relaxation of purifying selection. Finally, the evolution of acetyl-CoA carboxylase is unusual in Geraniaceae because it is only the second angiosperm family where both prokaryotic and eukaryotic ACCases functionally coexist in the plastid.


Asunto(s)
Evolución Molecular , Genoma Mitocondrial , Genoma de Plastidios , Geranium/genética , Secuencia de Bases , Genoma de Planta , Geranium/química , Geranium/clasificación , Mitocondrias/genética , Mutación , Filogenia , Plastidios/genética
11.
PLoS One ; 12(5): e0178208, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28552970

RESUMEN

The scattered eastern African high mountains harbor a renowned and highly endemic flora, but the taxonomy and phylogeographic history of many plant groups are still insufficiently known. The high-alpine populations of the Geranium arabicum/kilimandscharicum complex present intricate morphological variation and have recently been suggested to comprise two new endemic taxa. Here we aim to contribute to a clarification of the taxonomy of these populations by analyzing genetic (AFLP) variation in range-wide high-alpine samples, and we address whether hybridization has contributed to taxonomic problems. We identified only two genetic groups. One corresponded to G. kilimandscharicum, which has been reported as exclusively high-alpine and confined to the eastern Rift mountains in East Africa. The other corresponded to G. arabicum, reported from lower altitudes on the same mountains as well as from a wide altitudinal span in Ethiopia and on the western Rift mountains in East Africa. The four populations analyzed of a recently described species from the Bale Mts in Ethiopia were admixed, indicating that they result from recent long-distance dispersal of G. kilimandscharicum from East Africa followed by hybridization with local G. arabicum in naturally disturbed habitats. Some admixture between the two genetic groups was also inferred on other mountains, supporting earlier suggestions of introgression based on morphology. We did not find support for recognition of the recently suggested new subspecies of G. arabicum in Ethiopia. Interestingly, the high-alpine G. kilimandscharicum lacked clear geographic structuring, suggesting a recent history of colonization of the different mountains or extensive intermountain gene flow.


Asunto(s)
Altitud , Geranium/genética , Clima Tropical , África Oriental , Análisis del Polimorfismo de Longitud de Fragmentos Amplificados , Genes de Plantas , Geranium/clasificación
12.
Sci Rep ; 7: 45838, 2017 04 04.
Artículo en Inglés | MEDLINE | ID: mdl-28374829

RESUMEN

Amongst gynodioecious plant breeding systems, there can exist intermediate morphs with a reduction in their male function (i.e. reduced number of functional anthers). Along with this sexual trimorphism, plants can also show floral colour polymorphism. Such intricate mixtures of phenotypes within a species may have complex effects on floral rewards. Floral rewards are known to vary between sexually dimorphic species and to a lesser extent between colour morphs. However, the interactive effect of sexual trimorphism and colour polymorphism is unexplored. We measured nectar's sugar content in the sexually trimorphic Geranium sylvaticum, a gynodioecious plant with a light/dark floral polymorphism. We found that nectar reward differed across genders and colour morphs. Results were not however consistent within the three genders; dark female and hermaphrodite flowers had higher sugar content than light morphs, whereas intermediate flowers did not. As expected, females and hermaphrodites had different nectar reward, with intermediate morphs being midway between the other genders. In intermediates, the sugar content was not related to the number of functional stamens. We show for the first time the existence of sex-specific differences between flower gender and colour morphs in nectar rewards. Our results demonstrate the importance of considering multiple and conflicting selection pressures to explain rewards.


Asunto(s)
Flores/genética , Geranium/genética , Fitomejoramiento , Polinización/genética , Femenino , Geranium/fisiología , Humanos , Fenotipo , Pigmentación/genética , Néctar de las Plantas/genética , Polinización/fisiología , Conducta Sexual/fisiología
13.
Mol Phylogenet Evol ; 110: 134-149, 2017 05.
Artículo en Inglés | MEDLINE | ID: mdl-28288945

RESUMEN

The cosmopolitan genus Geranium L. (Geraniaceae) consists of c. 350 species distributed in temperate habitats worldwide, with most of its diversity concentrated in the Mediterranean region. Unlike other genera in Geraniaceae, the species of Geranium present contrasting seed discharge syndromes, i.e. the 'Erodium-type' (ET), the 'carpel-projection type' (CP), the 'seed-ejection type' (SE), and the 'inoperative type' (IT), which have been used to delimit major groups within the genus. However, phylogenetic relationships within Geranium are unknown and so is the evolution of the different seed discharge mechanisms. Here, we used a calibrated multispecies coalescent approach to infer the species-level phylogeny and divergence times of the genus based on chloroplast (rbcL, trnL-trnF) and nuclear (ITS) DNA sequences. Our sampling represents most of the morphological variation described in the genus. We reconstruct the evolution of the seed discharge mechanism using ancestral state reconstruction (ASR) techniques on the multispecies coalescent tree, and assess the association between fruit type evolution and species diversification using stochastic birth-death and trait-dependent diversification models. Finally, we reconstruct the early biogeographic history of the genus using discrete and continuous biogeographic analyses of species distribution centroids, including fossil evidence and tip dates. Our results show that fruit type is homoplasious and that the classification based on fruit type in Geranium is artificial. The taxonomy and putative apomorphic characters for Geranium are discussed. ASR of the fruit characters suggests that ET may represent the ancestral state in Geranium and from which CP originated twice, IT presumably once, and SE twice. The independent appearance of the SE syndrome is in both cases associated with increases in diversification rates in the genus. The biogeographic analysis centers the origin and early 10Ma diversification of Geranium on the Mediterranean region. The evolution of seed discharge mechanism about 5Ma might have allowed the species of Geranium to increase in geographic range and to ultimately, diversify.


Asunto(s)
Biodiversidad , Frutas/anatomía & histología , Geranium/anatomía & histología , Geranium/clasificación , Filogenia , Secuencia de Bases , Teorema de Bayes , ADN de Cloroplastos/genética , ADN de Plantas/genética , ADN Ribosómico/genética , Geranium/genética , Modelos Biológicos , Filogeografía , Semillas/anatomía & histología , Análisis de Secuencia de ADN , Especificidad de la Especie
14.
BMC Genomics ; 18(1): 74, 2017 01 13.
Artículo en Inglés | MEDLINE | ID: mdl-28086783

RESUMEN

BACKGROUND: Rose-scented geranium (Pelargonium sp.) is a perennial herb that produces a high value essential oil of fragrant significance due to the characteristic compositional blend of rose-oxide and acyclic monoterpenoids in foliage. Recently, the plant has also been shown to produce tartaric acid in leaf tissues. Rose-scented geranium represents top-tier cash crop in terms of economic returns and significance of the plant and plant products. However, there has hardly been any study on its metabolism and functional genomics, nor any genomic expression dataset resource is available in public domain. Therefore, to begin the gains in molecular understanding of specialized metabolic pathways of the plant, de novo sequencing of rose-scented geranium leaf transcriptome, transcript assembly, annotation, expression profiling as well as their validation were carried out. RESULTS: De novo transcriptome analysis resulted a total of 78,943 unique contigs (average length: 623 bp, and N50 length: 752 bp) from 15.44 million high quality raw reads. In silico functional annotation led to the identification of several putative genes representing terpene, ascorbic acid and tartaric acid biosynthetic pathways, hormone metabolism, and transcription factors. Additionally, a total of 6,040 simple sequence repeat (SSR) motifs were identified in 6.8% of the expressed transcripts. The highest frequency of SSR was of tri-nucleotides (50%). Further, transcriptome assembly was validated for randomly selected putative genes by standard PCR-based approach. In silico expression profile of assembled contigs were validated by real-time PCR analysis of selected transcripts. CONCLUSION: Being the first report on transcriptome analysis of rose-scented geranium the data sets and the leads and directions reflected in this investigation will serve as a foundation for pursuing and understanding molecular aspects of its biology, and specialized metabolic pathways, metabolic engineering, genetic diversity as well as molecular breeding.


Asunto(s)
Perfilación de la Expresión Génica , Geranium/genética , Geranium/metabolismo , Tartratos/metabolismo , Terpenos/metabolismo , Transcriptoma , Análisis por Conglomerados , Biología Computacional/métodos , Ontología de Genes , Secuenciación de Nucleótidos de Alto Rendimiento , Redes y Vías Metabólicas , Repeticiones de Microsatélite , Anotación de Secuencia Molecular , Fenotipo , Reproducibilidad de los Resultados
15.
Physiol Plant ; 159(4): 381-400, 2017 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-27580641

RESUMEN

Rose-scented geranium (Pelargonium spp.) is one of the most important aromatic plants and is well known for its diverse perfumery uses. Its economic importance is due to presence of fragrance rich essential oil in its foliage. The essential oil is a mixture of various volatile phytochemicals which are mainly terpenes (isoprenoids) in nature. In this study, on the geranium foliage genes related to isoprenoid biosynthesis (DXS, DXR and HMGR) were isolated, cloned and confirmed by sequencing. Further, the first gene of 2-C-methyl-d-erythritol-4-phosphate (MEP) pathway, 1-deoxy-d-xylulose-5-phosphate synthase (GrDXS), was made full length by using rapid amplification of cDNA ends strategy. GrDXS contained a 2157 bp open reading frame that encoded a polypeptide of 792 amino acids having calculated molecular weight 77.5 kDa. This study is first report on heterologous expression and kinetic characterization of any gene from this economically important plant. Expression analysis of these genes was performed in different tissues as well as at different developmental stages of leaves. In response to external elicitors, such as methyl jasmonate, salicylic acid, light and wounding, all the three genes showed differential expression profiles. Further GrDXS was over expressed in the homologous (rose-scented geranium) as well as in heterologous (Withania somnifera) plant systems through genetic transformation approach. The over-expression of GrDXS led to enhanced secondary metabolites production (i.e. essential oil in rose-scented geranium and withanolides in W. somnifera). To the best of our knowledge, this is the first report showing the expression profile of the three genes related to isoprenoid biosynthesis pathways operated in rose-scented geranium as well as functional characterization study of any gene from rose-scented geranium through a genetic transformation system.


Asunto(s)
Vías Biosintéticas/genética , Butadienos/metabolismo , Genes de Plantas , Geranium/genética , Hemiterpenos/metabolismo , Pentanos/metabolismo , Plastidios/metabolismo , Metabolismo Secundario/genética , Terpenos/metabolismo , Withania/genética , Acetatos/farmacología , Secuencia de Bases , Biocatálisis/efectos de los fármacos , Vías Biosintéticas/efectos de los fármacos , Vías Biosintéticas/efectos de la radiación , Clonación Molecular , Biología Computacional , Ciclopentanos/farmacología , Evolución Molecular , Perfilación de la Expresión Génica , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Regulación de la Expresión Génica de las Plantas/efectos de la radiación , Geranium/efectos de los fármacos , Geranium/efectos de la radiación , Luz , Oxilipinas/farmacología , Filogenia , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Plastidios/efectos de los fármacos , Plastidios/efectos de la radiación , Proteínas Recombinantes/metabolismo , Metabolismo Secundario/efectos de los fármacos , Metabolismo Secundario/efectos de la radiación , Alineación de Secuencia , Análisis de Secuencia de ADN , Homología Estructural de Proteína , Withania/efectos de los fármacos , Withania/efectos de la radiación
16.
New Phytol ; 208(2): 570-83, 2015 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-25989702

RESUMEN

The exchange of genetic material between cellular organelles through intracellular gene transfer (IGT) or between species by horizontal gene transfer (HGT) has played an important role in plant mitochondrial genome evolution. The mitochondrial genomes of Geraniaceae display a number of unusual phenomena including highly accelerated rates of synonymous substitutions, extensive gene loss and reduction in RNA editing. Mitochondrial DNA sequences assembled for 17 species of Geranium revealed substantial reduction in gene and intron content relative to the ancestor of the Geranium lineage. Comparative analyses of nuclear transcriptome data suggest that a number of these sequences have been functionally relocated to the nucleus via IGT. Evidence for rampant HGT was detected in several Geranium species containing foreign organellar DNA from diverse eudicots, including many transfers from parasitic plants. One lineage has experienced multiple, independent HGT episodes, many of which occurred within the past 5.5 Myr. Both duplicative and recapture HGT were documented in Geranium lineages. The mitochondrial genome of Geranium brycei contains at least four independent HGT tracts that are absent in its nearest relative. Furthermore, G. brycei mitochondria carry two copies of the cox1 gene that differ in intron content, providing insight into contrasting hypotheses on cox1 intron evolution.


Asunto(s)
Evolución Molecular , Transferencia de Gen Horizontal , Genes de Plantas , Genoma Mitocondrial , Genoma de Planta , Geranium/genética , Espacio Intracelular/genética , Secuencia de Bases , ADN Mitocondrial/genética , ADN de Plantas/genética , Complejo IV de Transporte de Electrones/genética , Conversión Génica , Intrones/genética , Datos de Secuencia Molecular , Filogenia , Factores de Tiempo
17.
Plant Physiol Biochem ; 89: 53-63, 2015 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-25698666

RESUMEN

The overexpression of dihydroxyacetone synthase (DAS) and dihydroxyacetone kinase (DAK) from methylotrophic yeasts in chloroplasts created a photosynthetic formaldehyde (HCHO)-assimilation pathway (DAS/DAK pathway) in transgenic tobacco. Geranium has abilities to absorb and metabolize HCHO. Results of this study showed that the installed DAS/DAK pathway functioning in chloroplasts greatly enhanced the role of the Calvin cycle in transgenic geranium under high concentrations of gaseous HCHO stress. Consequently, the yield of sugars from HCHO-assimilation increased approximately 6-fold in transgenic geranium leaves, and concomitantly, the role of three original HCHO metabolic pathways reduced, leading to a significant decrease in formic acid, citrate and glycine production from HCHO metabolism. Although the role of three metabolic pathways reduced in transgenic plants under high concentrations of gaseous HCHO stress, the installed DAS/DAK pathway could still function together with the original HCHO metabolic pathways. Consequently, the gaseous HCHO-resistance of transgenic plants was significantly improved, and the generation of H2O2 in the transgenic geranium leaves was significantly less than that in the wild type (WT) leaves. Under environmental-polluted gaseous HCHO stress for a long duration, the stomata conductance of transgenic plants remained approximately 2-fold higher than that of the WT, thereby increasing its ability to purify gaseous HCHO polluted environment.


Asunto(s)
Adaptación Fisiológica/genética , Transferasas de Aldehído-Cetona/genética , Contaminantes Ambientales/metabolismo , Formaldehído/metabolismo , Geranium/genética , Fosfotransferasas (Aceptor de Grupo Alcohol)/genética , Plantas Modificadas Genéticamente/genética , Transferasas de Aldehído-Cetona/metabolismo , Biodegradación Ambiental , Cloroplastos/metabolismo , Gases/metabolismo , Expresión Génica , Genes Fúngicos , Geranium/metabolismo , Peróxido de Hidrógeno/metabolismo , Redes y Vías Metabólicas/genética , Fosfotransferasas (Aceptor de Grupo Alcohol)/metabolismo , Fotosíntesis/genética , Hojas de la Planta/metabolismo , Estomas de Plantas/metabolismo , Plantas Modificadas Genéticamente/metabolismo , Estrés Fisiológico , Nicotiana/genética , Levaduras/genética
18.
Evolution ; 68(10): 2945-59, 2014 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-24931621

RESUMEN

Adaptive evolution can affect the successful establishment of invasive species, but changes in selective pressures, loss of genetic variation in relevant traits, and/or altered trait correlations can make adaptation difficult to predict. We used a common-garden experiment to assess trait correlations and patterns of adaptation in the invasive plant, Geranium carolinianum, sampled across 20 populations in its native (United States) and invasive (China) ranges. We used multivariate QST - FST tests to determine if phenotypic differences between countries are attributable to adaptation. We also compared population-level variation within each country to assess whether local adaptation resulted in similar multivariate phenotypes in the United States and China. Between countries, most phenotypic differences are indistinguishable from genetic drift, although we detected a signature of adaptation to the colder, drier winters in China. There was no evidence for increases in invasive traits in China. Within countries, strong multivariate adaptation appears to be driven by latitudinal climatic variation in the United States, but not in China. Additionally, adaptive trait combinations as well as their underlying correlations differ between the two countries, indicating that adaptation in invasive populations does not parallel patterns in native populations due to differences in selection pressures, genetic constraints, or both.


Asunto(s)
Adaptación Fisiológica/genética , Evolución Molecular , Geranium/genética , Especies Introducidas , China , Clima , Sitios Genéticos , Variación Genética , Fenotipo , Carácter Cuantitativo Heredable , Estados Unidos
19.
Heredity (Edinb) ; 113(5): 464-70, 2014 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-24824284

RESUMEN

Gynodioecy, the co-occurrence of female and hermaphroditic individuals within a population, is an important intermediate in the evolution of separate sexes. The first step, female maintenance, requires females to have higher seed fitness compared with hermaphrodites. A common mechanism thought to increase relative female fitness is inbreeding depression avoidance, the magnitude of which depends on hermaphroditic selfing rates and the strength of inbreeding depression. Less well studied is the effect of biparental inbreeding on female fitness. Biparental inbreeding can affect relative female fitness only if its consequence or frequency differs between sexes, which could occur if sex structure and genetic structure both occur within populations. To determine whether inbreeding avoidance and/or biparental inbreeding can account for female persistence in Geranium maculatum, we measured selfing and biparental inbreeding rates in four populations and the spatial genetic structure in six populations. Selfing rates of hermaphrodites were low and did not differ significantly from zero in any population, leading to females gaining at most a 1-14% increase in seed fitness from inbreeding avoidance. Additionally, although significant spatial genetic structure was found in all populations, biparental inbreeding rates were low and only differed between sexes in one population, thereby having little influence on female fitness. A review of the literature revealed few sexual differences in biparental inbreeding among other gynodioecious species. Our results show that mating system differences may not fully account for female maintenance in this species, suggesting other mechanisms may be involved.


Asunto(s)
Geranium/genética , Organismos Hermafroditas/genética , Endogamia , Reproducción/genética , Aptitud Genética , Genética de Población , Semillas/genética
20.
Heredity (Edinb) ; 112(5): 497-507, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24346497

RESUMEN

Genetic diversity, and thus the adaptive potential of invasive populations, is largely based on three factors: patterns of genetic diversity in the species' native range, the number and location of introductions and the number of founding individuals per introduction. Specifically, reductions in genetic diversity ('founder effects') should be stronger for species with low within-population diversity in their native range and few introductions of few individuals to the invasive range. We test these predictions with Geranium carolinianum, a winter annual herb native to North America and invasive in China. We measure the extent of founder effects using allozymes and microsatellites, and ask whether this is consistent with its colonization history and patterns of diversity in the native range. In the native range, genetic diversity is higher and structure is lower than expected based on life history traits. In China, our results provide evidence for multiple introductions near Nanjing, Jiangsu province, with subsequent range expansion to the west and south. Patterns of genetic diversity across China reveal weak founder effects that are driven largely by low-diversity populations at the expansion front, away from the introduction location. This suggests that reduced diversity in China has resulted from successive founder events during range expansion, and that the loss of genetic diversity in the Nanjing area was mitigated by multiple introductions from diverse source populations. This has implications for the future of G. carolinianum in China, as continued gene flow among populations should eventually increase genetic diversity within the more recently founded populations.


Asunto(s)
Efecto Fundador , Variación Genética , Geranium/genética , Especies Introducidas , Análisis de Varianza , China , Frecuencia de los Genes , Genotipo , Geografía , Geranium/crecimiento & desarrollo , Repeticiones de Microsatélite/genética , América del Norte , Polimorfismo Genético , Dinámica Poblacional
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