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1.
J Agric Food Chem ; 71(49): 19717-19726, 2023 Dec 13.
Artículo en Inglés | MEDLINE | ID: mdl-38029278

RESUMEN

Meleagris gallopavo (turkey) coexpresses distinct hemoglobin (Hb) isoforms, Hb α2Aß2 (HbA) and α2Dß2 (HbD), at a ratio of ∼3:1 (HbA:HbD). Herein, the reactivities of HbA and HbD were investigated in their native and free fatty acid (FFA)-modified states. Results indicated that HbD displays elevated autoxidation (kox) and an increased propensity to oxidize lipids in its reduced (oxy) and oxidized (met) forms. Interestingly, metHbD displayed less heme-globin cross-linking compared to HbA. Regarding FFA-modified Hb, we found that an FFA mixture and linoleic acid (LA) produced a bis-histidyl ferric (Bis-His) Hb species, decreasing the ability of Hb to oxidize lipids. Using molecular docking, we found LA to hydrogen bond with ß Arg C6, found at the α1ß2 interface, but the extent of Bis-His formation differs between HbA and HbD. Our findings suggest HbA displays elevated oxidative stability compared to HbD and that FFA may act as allosteric effectors of metHb.


Asunto(s)
Ácidos Grasos , Hemoglobina A , Hemoglobina A/química , Simulación del Acoplamiento Molecular , Hemoglobinas/química , Isoformas de Proteínas
2.
Genes (Basel) ; 11(8)2020 07 31.
Artículo en Inglés | MEDLINE | ID: mdl-32751969

RESUMEN

We identified two unstable variants in the third exon of α-globin genes: Hb Bernalda/Groene Hart (HBA1:c.358C>T), and Hb Caserta (HBA2:c.79G>A) in cis to Hb Sun Prairie (HBA2:c.391G>C), also named Hb Southern Italy. These mutations occurred in the H helix of the α-globin that is involved in heme contacting, specific recognition of α-hemoglobin-stabilizing protein (AHSP), and α1ß1 interactions. The carriers showed α-thalassemia phenotype, but one also jaundice and cholelithiasis. Molecular identification of clusters of families in Southern Italy encouraged molecular characterization of mRNA, globin chain analyses, molecular modeling studies, and comparison with globin variants to understand the mechanisms causing the α-thalassemia phenotype. A normal amount of Hb Bernalda/Groene Hart mRNA were found, and molecular modeling highlighted additional H bonds with AHSP. For Hb Southern Italy, showing an unexpected α/ß biosynthetic ratio typical of the ß-thalassemia type, two different molecular mechanisms were shown: Reduction of the variant mRNA, likely due to the No-Go Decay for the presence of unused triplet ACG at cod 26, and protein instability due to the impairment of AHSP interaction. The UDP glucuronosyltransferase 1A (UGT1A1) genotyping was conclusive in the case of jaundice and cholelithiasis. Multiple approaches are needed to properly identify the mechanisms leading to unstable variants and the effect of a mutation.


Asunto(s)
Hemoglobina A/genética , Hemoglobinas Anormales/genética , Mutación , Talasemia/genética , Adolescente , Adulto , Anciano , Sitios de Unión , Proteínas Sanguíneas/metabolismo , Células Cultivadas , Niño , Femenino , Glucuronosiltransferasa/genética , Hemoglobina A/química , Hemoglobina A/metabolismo , Hemoglobinas Anormales/química , Hemoglobinas Anormales/metabolismo , Humanos , Italia , Masculino , Persona de Mediana Edad , Chaperonas Moleculares/metabolismo , Fenotipo , Unión Proteica , Estabilidad Proteica , Estabilidad del ARN , ARN Mensajero/genética , ARN Mensajero/metabolismo , Talasemia/patología
3.
Int J Biol Macromol ; 159: 236-242, 2020 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-32387364

RESUMEN

The hypoxic environment of tumor may retard the efficacy of tumor therapeutic agents. Hemoglobin (Hb)-based oxygen carriers (HBOCs) could overcome the hypoxia of tumor by the oxygen delivery. However, typical HBOCs may not provide sufficient oxygen for their low oxygen transferring efficiency (OTE). In order to increase the OTE, human adult Hb (HbA) was subjected to triple modifications, i.e., αα-fumaryl crosslink at Lys-99(α), carboxymethylation at Val-1(α) and 8-arm PEG-based polymerization. Crosslink at Lys-99(α) and carboxymethylation at Val-1(α) synergistically led to a T-like quaternary structure of HbA. The dual modification significantly increased the partial oxygen pressure at 50% saturation (P50) of HbA from 14.8 mmHg to 34.6 mmHg and OTE from 9.1% to 33.1%. Eight-arm PEG-based polymerization slightly decreased the P50 of the Hb derivative to 27.8 mmHg and OTE to 30.5%. However, it can enlarge the molecular size of HbA and then prolong the serum duration of HbA. The triple modifications synergistically increased the autoxidation rate of Hb, which promote the production of reactive oxygen species (ROS). Therefore, the sufficient oxygen delivery and substantial production of ROS by the triply modified Hb may provide a potential strategy for tumor therapy.


Asunto(s)
Hemoglobina A/química , Oxidación-Reducción , Oxígeno/química , Multimerización de Proteína , Cromatografía en Gel , Cromatografía Líquida de Alta Presión , Dicroismo Circular , Hemoglobina A/aislamiento & purificación , Hemoglobina A/metabolismo , Humanos , Oxígeno/metabolismo , Péptidos/química , Péptidos/metabolismo , Unión Proteica , Estabilidad Proteica , Espectrometría Raman
4.
Int J Mol Sci ; 20(22)2019 Nov 16.
Artículo en Inglés | MEDLINE | ID: mdl-31744112

RESUMEN

The presence of hemoglobin A-S (HbAS) in erythrocytes has been related to the high production of reactive oxygen species (ROS) and an increased in intracellular oxidative stress that affects the progress of Plasmodium erythrocytic cycle life and attenuates its serious clinical symptoms. Nevertheless, oxidative effects on P. falciparum proteome across the intraerythrocytic cycle in the presence of HbAS traits have not been described yet. Here, an immune dot-blot assay was used to quantify the carbonyl index (C.I) on P. falciparum 3D7 proteome at the different asexual erythrocytic stages. Protein carbonylation on parasites cultivated in erythrocytes from two donors with HbAS increased 5.34 ± 1.42 folds at the ring stage compared to control grown in hemoglobin A-A (HbAA) red blood cells. Whereas at trophozoites and schizonts stages were augmented 2.80 ± 0.52 and 3.05 ± 0.75 folds, respectively. Besides proteins involved in processes of the stress response, recognition and invasion were identified from schizonts carbonylated bands by combining SDS-PAGE with MALDI-TOF-TOF analysis. Our results reinforce the hypothesis that such oxidative modifications do not appear to happen randomly, and the sickle cell trait affects mainly a small fraction of parasite proteins particularly sensitive to ROS.


Asunto(s)
Eritrocitos/metabolismo , Plasmodium falciparum/crecimiento & desarrollo , Proteoma/análisis , Rasgo Drepanocítico/patología , Electroforesis en Gel de Poliacrilamida , Eritrocitos/parasitología , Hemoglobina A/química , Hemoglobina A/metabolismo , Hemoglobina Falciforme/química , Hemoglobina Falciforme/metabolismo , Humanos , Estadios del Ciclo de Vida , Estrés Oxidativo , Plasmodium falciparum/metabolismo , Plasmodium falciparum/patogenicidad , Carbonilación Proteica , Proteoma/metabolismo , Proteínas Protozoarias/análisis , Proteínas Protozoarias/metabolismo , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
5.
Acta Crystallogr D Struct Biol ; 74(Pt 10): 1000-1007, 2018 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-30289410

RESUMEN

Crystallography chips are fixed-target supports consisting of a film (for example Kapton) or wafer (for example silicon) that is processed using semiconductor-microfabrication techniques to yield an array of wells or through-holes in which single microcrystals can be lodged for raster-scan probing. Although relatively expensive to fabricate, chips offer an efficient means of high-throughput sample presentation for serial diffraction data collection at synchrotron or X-ray free-electron laser (XFEL) sources. Truly efficient loading of a chip (one microcrystal per well and no wastage during loading) is nonetheless challenging. The wells or holes must match the microcrystal size of interest, requiring that a large stock of chips be maintained. Raster scanning requires special mechanical drives to step the chip rapidly and with micrometre precision from well to well. Here, a `chip-less' adaptation is described that essentially eliminates the challenges of loading and precision scanning, albeit with increased, yet still relatively frugal, sample usage. The device consists simply of two sheets of Mylar with the crystal solution sandwiched between them. This sheet-on-sheet (SOS) sandwich structure has been employed for serial femtosecond crystallography data collection with micrometre-sized crystals at an XFEL. The approach is also well suited to time-resolved pump-probe experiments, in particular for long time delays. The SOS sandwich enables measurements under XFEL beam conditions that would damage conventional chips, as documented here. The SOS sheets hermetically seal the sample, avoiding desiccation of the sample provided that the X-ray beam does not puncture the sheets. This is the case with a synchrotron beam but not with an XFEL beam. In the latter case, desiccation, setting radially outwards from each punched hole, sets lower limits on the speed and line spacing of the raster scan. It is shown that these constraints are easily accommodated.


Asunto(s)
Cristalografía/instrumentación , Recolección de Datos , Diseño de Equipo , Análisis por Micromatrices/métodos , Animales , Monóxido de Carbono/química , Embrión de Pollo , Cristalografía/métodos , Cristalografía por Rayos X/instrumentación , Cristalografía por Rayos X/métodos , Hemoglobina A/química , Humanos , Muramidasa/química , Oxihemoglobinas/química , Polímeros , Factores de Tiempo
6.
Sci Rep ; 7(1): 15281, 2017 11 10.
Artículo en Inglés | MEDLINE | ID: mdl-29127281

RESUMEN

Elevated sphingosine 1-phosphate (S1P) is detrimental in Sickle Cell Disease (SCD), but the mechanistic basis remains obscure. Here, we report that increased erythrocyte S1P binds to deoxygenated sickle Hb (deoxyHbS), facilitates deoxyHbS anchoring to the membrane, induces release of membrane-bound glycolytic enzymes and in turn switches glucose flux towards glycolysis relative to the pentose phosphate pathway (PPP). Suppressed PPP causes compromised glutathione homeostasis and increased oxidative stress, while enhanced glycolysis induces production of 2,3-bisphosphoglycerate (2,3-BPG) and thus increases deoxyHbS polymerization, sickling, hemolysis and disease progression. Functional studies revealed that S1P and 2,3-BPG work synergistically to decrease both HbA and HbS oxygen binding affinity. The crystal structure at 1.9 Å resolution deciphered that S1P binds to the surface of 2,3-BPG-deoxyHbA and causes additional conformation changes to the T-state Hb. Phosphate moiety of the surface bound S1P engages in a highly positive region close to α1-heme while its aliphatic chain snakes along a shallow cavity making hydrophobic interactions in the "switch region", as well as with α2-heme like a molecular "sticky tape" with the last 3-4 carbon atoms sticking out into bulk solvent. Altogether, our findings provide functional and structural bases underlying S1P-mediated pathogenic metabolic reprogramming in SCD and novel therapeutic avenues.


Asunto(s)
Anemia de Células Falciformes/metabolismo , Eritrocitos Anormales/metabolismo , Hemoglobina A/metabolismo , Hemoglobina Falciforme/metabolismo , Lisofosfolípidos/metabolismo , Esfingosina/análogos & derivados , 2,3-Difosfoglicerato/química , 2,3-Difosfoglicerato/metabolismo , Anemia de Células Falciformes/patología , Animales , Eritrocitos Anormales/patología , Femenino , Hemoglobina A/química , Hemoglobina Falciforme/química , Hemólisis , Humanos , Lisofosfolípidos/química , Masculino , Ratones , Ratones Transgénicos , Estrés Oxidativo , Vía de Pentosa Fosfato , Esfingosina/química , Esfingosina/metabolismo
7.
Ann Clin Lab Sci ; 47(5): 625-627, 2017 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-29066493

RESUMEN

We report a case of an extremely rare hemoglobin (Hb) variant-Hb Broomhill, which has been only reported once in the literature. Hemoglobin fractions were determined by capillary electrophoresis (Sebia Capillarys 2 Flex piercing) and high performance liquid chromatography (HPLC) (Bio-Rad Variant™ II Hemoglobin Testing System), respectively. Complete blood count and DNA sequencing were also performed. The capillary electrophoregram revealed a tiny shoulder peak before the HbA peak and a subtle abnormal HbA2 peak (slightly wider and lower), even though the percentage of each hemoglobin fraction was within the reference range (HbA, 97.4%; HbA2, 2.6%). On HPLC, not only the percentage but also the peak shape of each hemoglobin fraction was normal (HbA 88.2%, HbA2 2.5%, HbF 0.6%). Eventually, sequencing analysis of α genes confirmed a missense mutation (CCC>GCC at codon 114 in alpha1 gene) which caused Hb Broomhill variant. Our report suggest that capillary electrophoresis may be an accurate tool for screening and diagnosis of Hb disorders.


Asunto(s)
Hemoglobina A/genética , Hemoglobinopatías/diagnóstico , Hemoglobinas Anormales/genética , Mutación Missense , Adulto , Anemia/etiología , Recuento de Células Sanguíneas , China , Análisis Mutacional de ADN , Electroforesis Capilar , Femenino , Hemoglobina A/química , Hemoglobina A/aislamiento & purificación , Hemoglobina A/metabolismo , Hemoglobinopatías/sangre , Hemoglobinopatías/genética , Hemoglobinopatías/fisiopatología , Hemoglobinas Anormales/química , Hemoglobinas Anormales/aislamiento & purificación , Hemoglobinas Anormales/metabolismo , Humanos
8.
Sci Rep ; 7(1): 10926, 2017 09 07.
Artículo en Inglés | MEDLINE | ID: mdl-28883619

RESUMEN

Human hemoglobin (Hb) is a benchmark protein of structural biology that shaped our view of allosterism over 60 years ago, with the introduction of the MWC model based on Perutz structures of the oxy(R) and deoxy(T) states and the more recent Tertiary Two-State model that proposed the existence of individual subunit states -"r" and "t"-, whose structure is yet unknown. Cooperative oxygen binding is essential for Hb function, and despite decades of research there are still open questions related to how tertiary and quaternary changes regulate oxygen affinity. In the present work, we have determined the free energy profiles of oxygen migration and for HisE7 gate opening, with QM/MM calculations of the oxygen binding energy in order to address the influence of tertiary differences in the control of oxygen affinity. Our results show that in the α subunit the low to high affinity transition is achieved by a proximal effect that mostly affects oxygen dissociation and is the driving force of the allosteric transition, while in the ß subunit the affinity change results from a complex interplay of proximal and distal effects, including an increase in the HE7 gate opening, that as shown by free energy profiles promotes oxygen uptake.


Asunto(s)
Hemoglobina A/química , Hemoglobina A/metabolismo , Oxígeno/metabolismo , Humanos , Unión Proteica , Estructura Cuaternaria de Proteína , Estructura Terciaria de Proteína
9.
Int J Biol Macromol ; 99: 358-364, 2017 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-28259625

RESUMEN

The reaction between the antimalarial drug dihydroartemisinin (DHA) and hemoglobin A (HbA) was investigated in vitro. A fluorescein-tagged artemisinin analog reacted with HbA and fluorescent HbA-drug adducts could be visualized on SDS-PAGE to confirm stable covalent reaction adducts and necessity of the endoperoxide moiety and Fe(II). Mass spectrometric analyses revealed that DHA favourably alkylated protein part rather than heme and the modification site was identified to be at Tyr35 of the beta globin chain.


Asunto(s)
Antimaláricos/metabolismo , Artemisininas/metabolismo , Hemoglobina A/metabolismo , Alquilación/efectos de los fármacos , Antimaláricos/química , Antimaláricos/farmacología , Artemisininas/química , Artemisininas/farmacología , Sitios de Unión , Colorantes Fluorescentes/química , Hemoglobina A/química , Humanos , Modelos Moleculares , Conformación Proteica en Hélice alfa , Conformación Proteica en Lámina beta , Espectrometría de Masas en Tándem , Tirosina/metabolismo
10.
Biochemistry ; 56(10): 1444-1459, 2017 03 14.
Artículo en Inglés | MEDLINE | ID: mdl-28218841

RESUMEN

Removal of heme from human hemoglobin (Hb) results in formation of an apoglobin heterodimer. Titration of this apodimer with guanidine hydrochloride (GdnHCl) leads to biphasic unfolding curves indicating two distinct steps. Initially, the heme pocket unfolds and generates a dimeric intermediate in which ∼50% of the original helicity is lost, but the α1ß1 interface is still intact. At higher GdnHCl concentrations, this intermediate dissociates into unfolded monomers. This structural interpretation was verified by comparing GdnHCl titrations for adult human hemoglobin A (HbA), recombinant fetal human hemoglobin (HbF), recombinant Hb cross-linked with a single glycine linker between the α chains, and recombinant Hbs with apolar heme pocket mutations that markedly stabilize native conformations in both subunits. The first phase of apoHb unfolding is independent of protein concentration, little affected by genetic cross-linking, but significantly shifted toward higher GdnHCl concentrations by the stabilizing distal pocket mutations. The second phase depends on protein concentration and is shifted to higher GdnHCl concentrations by genetic cross-linking. This model for apoHb unfolding allowed us to quantitate subtle differences in stability between apoHbA and apoHbF, which suggest that the ß and γ heme pockets have similar stabilities, whereas the α1γ1 interface is more resistant to dissociation than the α1ß1 interface.


Asunto(s)
Apoproteínas/química , Hemoglobina Fetal/química , Guanidina/química , Hemoglobina A/química , Hemoglobinas/química , Apoproteínas/genética , Apoproteínas/metabolismo , Clonación Molecular , Escherichia coli/genética , Escherichia coli/metabolismo , Hemoglobina Fetal/genética , Hemoglobina Fetal/metabolismo , Expresión Génica , Glicina/química , Glicina/metabolismo , Hemo/química , Hemo/aislamiento & purificación , Hemo/metabolismo , Hemoglobina A/genética , Hemoglobina A/metabolismo , Hemoglobinas/genética , Hemoglobinas/metabolismo , Humanos , Cinética , Desnaturalización Proteica , Dominios Proteicos , Pliegue de Proteína , Multimerización de Proteína , Estabilidad Proteica , Estructura Secundaria de Proteína , Desplegamiento Proteico , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo
11.
Redox Biol ; 12: 114-120, 2017 08.
Artículo en Inglés | MEDLINE | ID: mdl-28222378

RESUMEN

Hemoglobin (Hb) is well protected inside the red blood cells (RBCs). Upon hemolysis and when free in circulation, Hb can be involved in a range of radical generating reactions and may thereby attack several different biomolecules. In this study, we have examined the potential damaging effects of cell-free Hb on plasmid DNA (pDNA). Hb induced cleavage of supercoiled pDNA (sc pDNA) which was proportional to the concentration of Hb applied. Almost 70% of sc pDNA was converted to open circular or linear DNA using 10µM of Hb in 12h. Hb can be present in several different forms. The oxy (HbO2) and met forms are most reactive, while the carboxy-protein shows only low hydrolytic activity. Hemoglobin A (HbA) could easily induce complete pDNA cleavage while fetal hemoglobin (HbF) was three-fold less reactive. By inserting, a redox active cysteine residue on the surface of the alpha chain of HbF by site-directed mutagenesis, the DNA cleavage reaction was enhanced by 82%. Reactive oxygen species were not directly involved in the reaction since addition of superoxide dismutase and catalase did not prevent pDNA cleavage. The reactivity of Hb with pDNA can rather be associated with the formation of protein based radicals.


Asunto(s)
División del ADN , ADN/química , Hemoglobina Fetal/metabolismo , Hemoglobina A/metabolismo , Adulto , Sistema Libre de Células , Cisteína/genética , Hemoglobina Fetal/química , Hemoglobina Fetal/genética , Hemoglobina A/química , Hemoglobina A/genética , Humanos , Mutagénesis Sitio-Dirigida , Plásmidos/genética , Estructura Secundaria de Proteína , Especies Reactivas de Oxígeno/metabolismo
12.
Int J Biol Macromol ; 95: 1159-1168, 2017 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-27825993

RESUMEN

Post-translational modification of proteins by Maillard reaction, known as glycation, is thought to be the root cause of different complications, particularly in diabetes mellitus and age-related disorders. Methylglyoxal (MG), a reactive α-oxoaldehyde, increases in diabetic condition and reacts with proteins to form advanced glycation end products (AGEs) following Maillard-like reaction. In the present study, we have investigated the in vitro effect of methylglyoxal (200, 300µm) on the heme protein hemoglobin (HbA0) (100µm) after incubation for one week at 25°C. Compared to HbA0, MG-treated HbA0 exhibited decreased absorbance around 280nm, reduced intrinsic fluorescence and lower surface hydrophobicity. MG treatment was not found to significantly affect the secondary structure of HbA0. The stability of MG-treated HbA0 was found to be higher compared to HbA0. Moreover, H2O2-mediated iron release and subsequent iron-mediated oxidation (Fenton) reactions were found to be lower in presence of MG-treated HbA0 compared to HbA0. As shown by mass spectrometric studies, MG modified Arg-92α, Arg-104ß, Arg-31α and Arg-40ß of HbA0 to hydroimidazolone adducts. The modifications thus appear to be associated with the observed structural alterations of the heme protein. Considering the increased level of MG in diabetes mellitus as well as its high reactivity, AGEs might be associated with structural and functional modifications of the protein including physiological significance.


Asunto(s)
Productos Finales de Glicación Avanzada/química , Hemoglobina A/química , Hierro/química , Procesamiento Proteico-Postraduccional , Piruvaldehído/química , Secuencia de Aminoácidos , Productos Finales de Glicación Avanzada/metabolismo , Glicosilación , Hemoglobina A/metabolismo , Humanos , Peróxido de Hidrógeno/química , Peróxido de Hidrógeno/farmacología , Interacciones Hidrofóbicas e Hidrofílicas , Hierro/metabolismo , Reacción de Maillard/efectos de los fármacos , Modelos Moleculares , Oxidación-Reducción , Estabilidad Proteica , Estructura Secundaria de Proteína , Soluciones
13.
Science ; 354(6310): 336-339, 2016 10 21.
Artículo en Inglés | MEDLINE | ID: mdl-27846568

RESUMEN

To investigate the predictability of genetic adaptation, we examined the molecular basis of convergence in hemoglobin function in comparisons involving 56 avian taxa that have contrasting altitudinal range limits. Convergent increases in hemoglobin-oxygen affinity were pervasive among high-altitude taxa, but few such changes were attributable to parallel amino acid substitutions at key residues. Thus, predictable changes in biochemical phenotype do not have a predictable molecular basis. Experiments involving resurrected ancestral proteins revealed that historical substitutions have context-dependent effects, indicating that possible adaptive solutions are contingent on prior history. Mutations that produce an adaptive change in one species may represent precluded possibilities in other species because of differences in genetic background.


Asunto(s)
Adaptación Fisiológica/genética , Aves/genética , Evolución Molecular , Hemoglobina A/química , Hemoglobina A/genética , Hemoglobinas/química , Hemoglobinas/genética , Oxígeno/química , Sustitución de Aminoácidos/genética , Animales , Aves/fisiología , Hemoglobina A/clasificación , Hemoglobinas/clasificación , Mutación , Filogenia , Especificidad de la Especie
14.
Int J Mol Sci ; 17(4): 519, 2016 Apr 07.
Artículo en Inglés | MEDLINE | ID: mdl-27070578

RESUMEN

In this paper we review recent advances in computational chemistry and specifically focus on the chemical description of heme proteins and synthetic porphyrins that act as both mimics of natural processes and technological uses. These are challenging biochemical systems involved in electron transfer as well as biocatalysis processes. In recent years computational tools have improved considerably and now can reproduce experimental spectroscopic and reactivity studies within a reasonable error margin (several kcal·mol(-1)). This paper gives recent examples from our groups, where we investigated heme and synthetic metal-porphyrin systems. The four case studies highlight how computational modelling can correctly reproduce experimental product distributions, predicted reactivity trends and guide interpretation of electronic structures of complex systems. The case studies focus on the calculations of a variety of spectroscopic features of porphyrins and show how computational modelling gives important insight that explains the experimental spectra and can lead to the design of porphyrins with tuned properties.


Asunto(s)
Hemo/química , Porfirinas/química , Animales , Sistema Enzimático del Citocromo P-450/química , Citocromo-c Peroxidasa/química , Complejo IV de Transporte de Electrones/química , Electrones , Hemoproteínas/química , Hemoglobina A/química , Humanos , Metaloporfirinas/química , Modelos Moleculares , Conformación Proteica , Teoría Cuántica
15.
Clin Chim Acta ; 458: 40-3, 2016 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-27112303

RESUMEN

BACKGROUND: Glycated hemoglobin (GHb), reported as HbA1c, is used as marker of long-term glycemia for diabetic patients. HbA1c results from boronate affinity methods are generally considered to be unaffected by most hemoglobin variants; this assumes comparable glycation of variant and non-variant (HbAA) hemoglobins. In this report, glycation of HbA beta chain (ßA) and HbS beta chain (ßS) for the most common Hb variant trait (HbAS) are examined. METHODS: We analyzed 41 blood samples from subjects with HbAS, both with and without diabetes. Using LC-MS, ratios of glycated HbS to glycated HbA were determined by comparison of areas under the curves from extracted ion chromatograms. RESULTS: Glycation of ßS chains was significantly higher (p<0.001) than ßA chains; this difference was consistent across subjects. Total (α+ß) glycated HbAS was theoretically estimated to be ~5% higher than glycated HbAA. CONCLUSION: This novel mass-spectrometric approach described allows for relative quantification of glycated forms of ßS and ßA. Although ßS glycation was significantly higher than that of ßA, the difference in total glycation of HbAS versus HbAA was smaller and unlikely to impact clinical interpretation of boronate affinity HbA1c results. These data support the continued use of boronate affinity to measure HbA1c in patients with HbAS.


Asunto(s)
Hemoglobina Glucada/análisis , Hemoglobina A/química , Hemoglobina Falciforme/química , Cromatografía Liquida , Hemoglobina Glucada/química , Glicosilación , Humanos , Espectrometría de Masas
16.
Artículo en Inglés | MEDLINE | ID: mdl-26565277

RESUMEN

Nanoparticle dynamics impact a wide range of biological transport processes and applications in nanomedicine and natural resource engineering. Differential dynamic microscopy (DDM) was recently developed to quantify the dynamics of submicron particles in solutions from fluctuations of intensity in optical micrographs. Differential dynamic microscopy is well established for monodisperse particle populations, but has not been applied to solutions containing weakly scattering polydisperse biological nanoparticles. Here we use bright-field DDM (BDDM) to measure the dynamics of protein-rich liquid clusters, whose size ranges from tens to hundreds of nanometers and whose total volume fraction is less than 10(-5). With solutions of two proteins, hemoglobin A and lysozyme, we evaluate the cluster diffusion coefficients from the dependence of the diffusive relaxation time on the scattering wave vector. We establish that for weakly scattering populations, an optimal thickness of the sample chamber exists at which the BDDM signal is maximized at the smallest sample volume. The average cluster diffusion coefficient measured using BDDM is consistently lower than that obtained from dynamic light scattering at a scattering angle of 90°. This apparent discrepancy is due to Mie scattering from the polydisperse cluster population, in which larger clusters preferentially scatter more light in the forward direction.


Asunto(s)
Hemoglobina A/química , Microscopía/métodos , Muramidasa/química , Difusión , Dispersión Dinámica de Luz , Humanos , Imagen Óptica/métodos , Soluciones , Viscosidad , Agua/química
17.
Biochemistry ; 54(34): 5268-78, 2015 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-26226318

RESUMEN

Atomistic molecular dynamics simulations of diffusion of O2 from the hemes to the external solvent in the α- and ß-subunits of the human hemoglobin (HbA) tetramer reveal transient gas tunnels that are not seen in crystal structures. We find here that the tunnel topology, which encompasses the reported experimental Xe binding cavities, is identical in HbA's T, R, and R2 quaternary states. However, the O2 population in the cavities and the preferred O2 escape portals vary significantly with quaternary structure. For example, most O2 molecules escape from the T ß-subunit via the cavity at the center of the tetramer, but direct exit from the distal heme pocket dominates in the R2 ß-subunit. To understand what triggers the quaternary-linked redistribution of O2 within its tunnels, we examined how the simulated tertiary structure and dynamics of each subunit differs among T, R, and R2 and report that minor adjustments in α-chain dynamics and ß-heme position modulate O2 distribution and escape in HbA. Coupled to the ß-heme position, residue ßF71 undergoes quaternary-linked conformations that strongly regulate O2 migration between the ß-subunit and HbA's central cavity. Remarkably, the distal histidine (HisE7) remains in a closed conformation near the α- and ß-hemes in all states, but this does not prevent an average of 23, 31, and 46% of O2 escapes from the distal heme pockets of T, R, and R2, respectively, via several distal portals, with the balance of escapes occurring via the interior tunnels. Furthermore, preventing or restricting the access of O2 to selected cavities by mutating HisE7 and other heme pocket residues to tryptophan reveals how O2 migration adjusts to the bulky indole ring and sheds light on the experimental ligand binding kinetics of these variants. Overall, our simulations underscore the high gas porosity of HbA in its T, R, and R2 quaternary states and provide new mechanistic insights into why undergoing transitions among these states likely ensures effective O2 delivery by this tetrameric protein.


Asunto(s)
Hemoglobina A/química , Hemoglobina A/metabolismo , Oxígeno/metabolismo , Sitios de Unión , Cristalografía por Rayos X , Difusión , Hemo/química , Humanos , Simulación de Dinámica Molecular , Análisis de Componente Principal , Conformación Proteica , Estabilidad Proteica , Estructura Cuaternaria de Proteína , Subunidades de Proteína
18.
Biochemistry ; 54(34): 5279-89, 2015 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-26226401

RESUMEN

Hemoglobin transports O2 by binding the gas at its four hemes. Hydrogen bonding between the distal histidine (HisE7) and heme-bound O2 significantly increases the affinity of human hemoglobin (HbA) for this ligand. HisE7 is also proposed to regulate the release of O2 to the solvent via a transient E7 channel. To reveal the O2 escape routes controlled by HisE7 and to evaluate its role in gating heme access, we compare simulations of O2 diffusion from the distal heme pockets of the T and R states of HbA performed with HisE7 in its open (protonated) and closed (neutral) conformations. Irrespective of HisE7's conformation, we observe the same four or five escape routes leading directly from the α- or ß-distal heme pockets to the solvent. Only 21-53% of O2 escapes occur via these routes, with the remainder escaping through routes that encompass multiple internal cavities in HbA. The conformation of the distal HisE7 controls the escape of O2 from the heme by altering the distal pocket architecture in a pH-dependent manner, not by gating the E7 channel. Removal of the HisE7 side chain in the GlyE7 variant exposes the distal pockets to the solvent, and the percentage of O2 escapes to the solvent directly from the α- or ß-distal pockets of the mutant increases to 70-88%. In contrast to O2, the dominant water route from the bulk solvent is gated by HisE7 because protonation and opening of this residue dramatically increase the rate of influx of water into the empty distal heme pockets. The occupancy of the distal heme site by a water molecule, which functions as an additional nonprotein barrier to binding of the ligand to the heme, is also controlled by HisE7. Overall, analysis of gas and water diffusion routes in the subunits of HbA and its GlyE7 variant sheds light on the contribution of distal HisE7 in controlling polar and nonpolar ligand movement between the solvent and the hemes.


Asunto(s)
Hemoglobina A/química , Hemoglobina A/metabolismo , Sustitución de Aminoácidos , Sitios de Unión , Difusión , Hemo/química , Hemoglobina A/genética , Histidina/química , Humanos , Interacciones Hidrofóbicas e Hidrofílicas , Modelos Moleculares , Simulación de Dinámica Molecular , Mutagénesis Sitio-Dirigida , Oxígeno/metabolismo , Conformación Proteica , Subunidades de Proteína , Solventes , Agua/metabolismo
19.
Lasers Med Sci ; 30(1): 247-53, 2015 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-25217409

RESUMEN

Raman spectroscopy has been proposed as a tool for diagnosis of human blood diseases aiming a quick and accurate diagnosis. Sickle cell disease arises in infancy and causes a severe anemia; thus, an early diagnosis may avoid pathological complications such as vasoocclusion, hemolytic anemia, retinopathy, cardiovascular disease, and infections. This work evaluated spectral differences between hemoglobin S (HbS) and hemoglobin A (HbA) to be used in a diagnostic model based on principal components analysis. Blood samples of patients with a previous diagnosis of sickle cell disease were hemolyzed with water, centrifuged, and the pellet was collected with a pipette. Near-infrared Raman spectra (830 nm, 200 mW) were obtained from these samples, and a model based on principal components analysis and Mahalanobis distance were used to discriminate HbA from HbS. Differences were found in the spectra of HbS and HbA, mainly in the 882 and 1,373 cm(-1) (valine, HbA) and 1,547 and 1,622 cm(-1) (glutamic acid, HbS). The spectral model could correctly discriminate 100% of the samples in the correspondent groups. Raman spectroscopy was able to detect the subtle changes in the polypeptide chain (valine and glutamic acid substitution) due to the sickle cell disease and could be used to discriminate blood samples with HbS from HbA with minimum sample preparations (hemolysis with water and centrifugation).


Asunto(s)
Anemia de Células Falciformes/sangre , Anemia de Células Falciformes/diagnóstico , Hemoglobina A/química , Hemoglobina Falciforme/química , Espectrometría Raman , Adulto , Interpretación Estadística de Datos , Femenino , Hemólisis , Humanos , Masculino , Análisis de Componente Principal , Reproducibilidad de los Resultados , Adulto Joven
20.
J Biol Chem ; 290(1): 99-117, 2015 Jan 02.
Artículo en Inglés | MEDLINE | ID: mdl-25371199

RESUMEN

The giant extracellular hemoglobin (erythrocruorin) from the earth worm (Lumbricus terrestris) has shown promise as a potential hemoglobin-based oxygen carrier (HBOC) in in vivo animal studies. An important beneficial characteristic of this hemoglobin (LtHb) is the large number of heme-based oxygen transport sites that helps overcome issues of osmotic stress when attempting to provide enough material for efficient oxygen delivery. A potentially important additional property is the capacity of the HBOC either to generate nitric oxide (NO) or to preserve NO bioactivity to compensate for decreased levels of NO in the circulation. The present study compares the NO-generating and NO bioactivity-preserving capability of LtHb with that of human adult hemoglobin (HbA) through several reactions including the nitrite reductase, reductive nitrosylation, and still controversial nitrite anhydrase reactions. An assignment of a heme-bound dinitrogen trioxide as the stable intermediate associated with the nitrite anhydrase reaction in both LtHb and HbA is supported based on functional and EPR spectroscopic studies. The role of the redox potential as a factor contributing to the NO-generating activity of these two proteins is evaluated. The results show that LtHb undergoes the same reactions as HbA and that the reduced efficacy for these reactions for LtHb relative to HbA is consistent with the much higher redox potential of LtHb. Evidence of functional heterogeneity in LtHb is explained in terms of the large difference in the redox potential of the isolated subunits.


Asunto(s)
Sustitutos Sanguíneos/química , Hemoglobinas/química , Óxido Nítrico/química , Nitritos/química , Subunidades de Proteína/química , Animales , Sustitutos Sanguíneos/aislamiento & purificación , Hemoglobina A/química , Hemoglobina A/aislamiento & purificación , Hemoglobinas/aislamiento & purificación , Humanos , Cinética , Nitrito Reductasas/química , Óxidos de Nitrógeno/química , Oligoquetos/química , Oxidación-Reducción , Unión Proteica , Subunidades de Proteína/aislamiento & purificación , Soluciones
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