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1.
Protein J ; 39(5): 554-562, 2020 10.
Artículo en Inglés | MEDLINE | ID: mdl-32737834

RESUMEN

Biosynthesis of chlorophyll involves several enzymatic reactions of which many are shared with the heme biosynthesis pathway. Magnesium chelatase is the first specific enzyme in the chlorophyll pathway. It catalyzes the formation of Mg-protoporphyrin IX from the insertion of Mg2+ into protoporphyrin IX. The enzyme consists of three subunits encoded by three genes. The three genes are named Xantha-h, Xantha-g and Xantha-f in barley (Hordeum vulgare L.). The products of the genes have a molecular weight of 38, 78 and 148 kDa, respectively, as mature proteins in the chloroplast. Most studies on magnesium chelatase enzymes have been performed using recombinant proteins of Rhodobacter capsulatus, Synechocystis sp. PCC6803 and Thermosynechococcus elongatus, which are photosynthetic bacteria. In the present study we established a recombinant expression system for barley magnesium chelatase with the long-term goal to obtain structural information of this enigmatic enzyme complex from a higher plant. The genes Xantha-h, -g and -f were cloned in plasmid pET15b, which allowed the production of the three subunits as His-tagged proteins in Escherichia coli BL21(DE3)pLysS. The purified subunits stimulated magnesium chelatase activity of barley plastid extracts and produced activity in assays with only recombinant proteins. In preparation for future structural analyses of the barley magnesium chelatase, stability tests were performed on the subunits and activity assays were screened to find an optimal buffer system and pH.


Asunto(s)
Hordeum , Liasas , Proteínas de Plantas , Hordeum/enzimología , Hordeum/genética , Liasas/biosíntesis , Liasas/química , Liasas/genética , Liasas/aislamiento & purificación , Proteínas de Plantas/biosíntesis , Proteínas de Plantas/química , Proteínas de Plantas/genética , Proteínas de Plantas/aislamiento & purificación , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación
2.
Metab Eng ; 46: 13-19, 2018 03.
Artículo en Inglés | MEDLINE | ID: mdl-29474840

RESUMEN

Muconic acid (MA) is a dicarboxylic acid used for the production of industrially relevant chemicals such as adipic acid, terephthalic acid, and caprolactam. Because the synthesis of these polymer precursors generates toxic intermediates by utilizing petroleum-derived chemicals and corrosive catalysts, the development of alternative strategies for the bio-based production of MA has garnered significant interest. Plants produce organic carbon skeletons by harvesting carbon dioxide and energy from the sun, and therefore represent advantageous hosts for engineered metabolic pathways towards the manufacturing of chemicals. In this work, we engineered Arabidopsis to demonstrate that plants can serve as green factories for the bio-manufacturing of MA. In particular, dual expression of plastid-targeted bacterial salicylate hydroxylase (NahG) and catechol 1,2-dioxygenase (CatA) resulted in the conversion of the endogenous salicylic acid (SA) pool into MA via catechol. Sequential increase of SA derived from the shikimate pathway was achieved by expressing plastid-targeted versions of bacterial salicylate synthase (Irp9) and feedback-resistant 3-deoxy-D-arabino-heptulosonate synthase (AroG). Introducing this SA over-producing strategy into engineered plants that co-express NahG and CatA resulted in a 50-fold increase in MA titers. Considering that MA was easily recovered from senesced plant biomass after harvest, we envision the phytoproduction of MA as a beneficial option to add value to bioenergy crops.


Asunto(s)
Arabidopsis/metabolismo , Plantas Modificadas Genéticamente/metabolismo , Ácido Sórbico/análogos & derivados , Arabidopsis/genética , Catecol 1,2-Dioxigenasa/genética , Catecol 1,2-Dioxigenasa/metabolismo , Liasas/biosíntesis , Liasas/genética , Oxigenasas de Función Mixta/genética , Oxigenasas de Función Mixta/metabolismo , Plantas Modificadas Genéticamente/genética , Ácido Salicílico/metabolismo , Ácido Sórbico/metabolismo
3.
Neurogastroenterol Motil ; 30(10): e13273, 2018 10.
Artículo en Inglés | MEDLINE | ID: mdl-29286194

RESUMEN

BACKGROUND: The inhibitory effects of H2 S on spontaneous contractions of smooth muscles of small, and large intestines well-established but its role in the pathophysiology of diarrhea has not been identified. Therefore, this study evaluated the role of exogenous H2 S (NaHS) on diabetic-induced diarrhea and determined mRNA expression of cystathionine ß-lyase (CSE) and cystathionine γ-synthase (CBS) in diabetic rats. METHODS: In order to evaluate antidiarrheal effect of H2 S, normal and diabetic rats received NaHS and L-Cysteine and the total number of fecal pellets (FP) determined. The effect of NaHS on intestinal transit ratio (ITR) was also evaluated in diabetic rats. The level of mRNA expressions of CBS and CSE determined in smooth muscles of jejunum, ileum, and colon in normal, and diabetic rats. The effect of NaHS on frequency and tension of spontaneous contractions of smooth muscle strips of colon, ileum, and jejunum were investigated. KEY RESULTS: NaHS decreased ITR, total number of FP, frequency and tension of spontaneous contractions of colon, ileum, and jejunum muscle strips in diabetic rats. The level of mRNA expression of CSE and CBS in diabetic rats were lower than in normal rats. NaHS, and L-Cysteine decreased the number of FP in normal rats. CONCLUSIONS & INFERENCES: These findings showed NaHS effectively controlled diarrhea in diabetic rats through decreasing the frequency, and tension of spontaneous contraction of smooth muscles of large, and small intestines. The increased frequency and tension of spontaneous contractions of smooth muscles in diabetic rats may be due to down-regulation of H2 S biosynthesis enzymes.


Asunto(s)
Diabetes Mellitus Experimental/fisiopatología , Diarrea/fisiopatología , Intestinos/efectos de los fármacos , Sulfuros/farmacología , Animales , Liasas de Carbono-Oxígeno/biosíntesis , Liasas de Carbono-Oxígeno/efectos de los fármacos , Diabetes Mellitus Experimental/complicaciones , Diabetes Mellitus Experimental/metabolismo , Diarrea/etiología , Diarrea/metabolismo , Motilidad Gastrointestinal/efectos de los fármacos , Motilidad Gastrointestinal/fisiología , Intestinos/fisiopatología , Liasas/biosíntesis , Liasas/efectos de los fármacos , Masculino , Contracción Muscular/efectos de los fármacos , Contracción Muscular/fisiología , Músculo Liso/efectos de los fármacos , Músculo Liso/metabolismo , Músculo Liso/fisiopatología , Ratas , Ratas Wistar
4.
J Gen Appl Microbiol ; 62(4): 167-73, 2016 Sep 12.
Artículo en Inglés | MEDLINE | ID: mdl-27250663

RESUMEN

Cyanide is known as a toxic compound for almost all living organisms. We have searched for cyanide-resistant bacteria from the soil and stock culture collection of our laboratory, and have found the existence of a lot of microorganisms grown on culture media containing 10 mM potassium cyanide. Almost all of these cyanide-resistant bacteria were found to show ß-cyano-L-alanine (ß-CNAla) synthetic activity. ß-CNAla synthase is known to catalyze nitrile synthesis: the formation of ß-CNAla from potassium cyanide and O-acetyl-L-serine or L-cysteine. We found that some microorganisms were able to detoxify cyanide using O-methyl-DL-serine, O-phospho-L-serine and ß-chloro-DL-alanine. In addition, we purified ß-CNAla synthase from Pseudomonas ovalis No. 111 in nine steps, and characterized the purified enzyme. This enzyme has a molecular mass of 60,000 and appears to consist of two identical subunits. The purified enzyme exhibits a maximum activity at pH 8.5-9.0 at an optimal temperature of 40-50°C. The enzyme is specific for O-acetyl-L-serine and ß-chloro-DL-alanine. The Km value for O-acetyl-L-serine is 10.0 mM and Vmax value is 3.57 µmol/min/mg.


Asunto(s)
Alanina/análogos & derivados , Cianuros/metabolismo , Liasas/aislamiento & purificación , Liasas/metabolismo , Nitrilos/metabolismo , Pseudomonas/enzimología , Alanina/biosíntesis , Medios de Cultivo/química , Cisteína/metabolismo , Concentración de Iones de Hidrógeno , Cinética , Liasas/biosíntesis , Liasas/química , Peso Molecular , Pseudomonas/metabolismo , Serina/metabolismo , Serina O-Acetiltransferasa/metabolismo , Especificidad por Sustrato , Temperatura
5.
Insect Biochem Mol Biol ; 70: 99-110, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26714205

RESUMEN

Cyanogenic compounds occur widely in the plant kingdom. Therefore, many herbivores are adapted to the presence of these compounds in their diet by either avoiding cyanide release or by efficient cyanide detoxification mechanisms. The mechanisms of adaptation are not fully understood. Larvae of Pieris rapae (Lepidoptera: Pieridae) are specialist herbivores on glucosinolate-containing plants. They are exposed to cyanide during metabolism of phenylacetonitrile, a product of benzylglucosinolate breakdown catalyzed by plant myrosinases and larval nitrile-specifier protein (NSP) in the gut. Cyanide is metabolized to ß-cyanoalanine and thiocyanate in the larvae. Here, we demonstrate that larvae of P. rapae possess ß-cyanoalanine activity in their gut. We have identified three gut-expressed cDNAs designated PrBSAS1-PrBSAS3 which encode proteins with similarity to ß-substituted alanine synthases (BSAS). Characterization of recombinant PrBSAS1-PrBSAS3 shows that they possess ß-cyanoalanine activity. In phylogenetic trees, PrBSAS1-PrBSAS3, the first characterized insect BSAS, group together with a characterized mite ß-cyanoalanine synthase and bacterial enzymes indicating a similar evolutionary history.


Asunto(s)
Arabidopsis , Mariposas Diurnas/metabolismo , Cianuros/metabolismo , Herbivoria , Liasas/metabolismo , Animales , Mariposas Diurnas/enzimología , Cromatografía Líquida de Alta Presión , Inducción Enzimática , Liasas/biosíntesis , Liasas/química , Espectrometría de Masas
6.
J Sci Food Agric ; 95(7): 1554-61, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25103563

RESUMEN

BACKGROUND: In the food industry, the use of pectinase preparations with high pectin esterase (PE) activity leads to the release of methanol, which is strictly regulated in food products. Herein, a pectin-degrading enzyme (PDE) complex exhibiting low PE activity of three Aspergillus sojae ATCC 20235 mutants (M3, DH56 and Guserbiot 2.230) was investigated. Production of exo-/endo-polygalacturonase (PG), exo-polymethylgalacturonase (PMG) and pectin lyase (PL) by mutant M3 and A. sojae using two different carbon sources was evaluated in solid-state fermentation. Finally, experimental preparations obtained from the mutants and commercial pectinases standardized to the same potency were screened for PDEs. RESULTS: Mutant M3 grown on sugar beet was found to be the best producer of exo-PG, endo-PG, exo-PMG and PL, with maximum yields of 1111, 449, 130 and 123 U g(-1), respectively. All experimental preparations exhibited low PE activity, at least 21.5 times less than commercial pectinases, and higher endo-PG (40 U mL(-1)). CONCLUSION: Mutant M3 was the best PDE producer using sugar beet. Mutant strains presented a PDE complex featuring high endo-PG and very low PE activities. This novel complex with low de-esterifying activity can be exploited in the food industry to degrade pectin without releasing methanol.


Asunto(s)
Aspergillus niger/enzimología , Beta vulgaris , Fermentación , Complejos Multienzimáticos/metabolismo , Mutación , Pectinas/metabolismo , Poligalacturonasa/metabolismo , Aspergillus niger/genética , Aspergillus niger/crecimiento & desarrollo , Medios de Cultivo , Esterasas/metabolismo , Esterificación , Humanos , Liasas/biosíntesis , Liasas/metabolismo , Metanol/metabolismo
7.
Acta Crystallogr F Struct Biol Commun ; 70(Pt 10): 1368-71, 2014 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-25286941

RESUMEN

Multidrug-resistant Acinetobacter baumannii (Ab) has emerged as a leading nosocomial pathogen because of its resistance to most currently available antibiotics. Cystathionine ß-lyase (CBL), a pyridoxal 5'-phosphate (PLP)-dependent enzyme, catalyzes the second step in the transsulfuration pathway, which is essential for the metabolic interconversion of the sulfur-containing amino acids homocysteine and methionine. The enzymes of the transsulfuration pathway are considered to be attractive drug targets owing to their specificity to microbes and plants. As a potential target for the development of novel antibacterial drugs, the AbCBL protein was expressed, purified and crystallized. An AbCBL crystal diffracted to 1.57 Šresolution and belonged to the trigonal space group P3112, with unit-cell parameters a = b = 102.9, c = 136.5 Å. The asymmetric unit contained two monomers, with a corresponding VM of 2.3 Å(3) Da(-1) and a solvent content of 46.9%.


Asunto(s)
Acinetobacter baumannii/enzimología , Proteínas Bacterianas/química , Liasas/química , Secuencia de Aminoácidos , Proteínas Bacterianas/biosíntesis , Cristalización , Cristalografía por Rayos X , Escherichia coli , Expresión Génica , Liasas/biosíntesis , Datos de Secuencia Molecular , Fosfato de Piridoxal/química
8.
Protein Expr Purif ; 101: 61-7, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-24931499

RESUMEN

The ∼150kDa ChlH subunit of magnesium chelatase from Oryza sativa, Hordeum vulgare and Chlamydomonas reinhardtii have been heterologously expressed in Escherichiacoli. The active soluble protein is found as both a multimeric and a monomeric form. The multimeric ChlH appears to be oxidatively damaged but monomer production is favoured in growth conditions that are known to cause an oxidative stress response in E.coli. Inducing an oxidative stress response may be of general utility to improve the quality of proteins expressed in E. coli. The similar responses of ChlH's from the three different species suggest that oligomerization of oxidatively damaged ChlH may have a functional role in the chloroplast, possibly as a signal of oxidative stress or damage.


Asunto(s)
Escherichia coli/metabolismo , Liasas/biosíntesis , Liasas/metabolismo , Estrés Oxidativo/fisiología , Multimerización de Proteína/fisiología , Chlamydomonas reinhardtii/enzimología , Regulación Bacteriana de la Expresión Génica , Hordeum/enzimología , Liasas/genética , Oryza/enzimología , Oxidación-Reducción , Subunidades de Proteína/metabolismo , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo
9.
Mol Biol Rep ; 41(6): 4147-54, 2014 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-24562629

RESUMEN

In plants, the level of ethylene is determined by the activity of the key enzyme 1-aminocyclopropane-1-carboxylic acid (ACC) synthase (ACS). A gene encoding an ACC synthase protein was isolated from pear (Pyrus pyrifolia). This gene designated PpACS1a (GenBank accession no. KC632526) was 1488 bp in length with an open reading frame (ORF) encoding a protein of 495 amino acids that shared high similarity with other pear ACC synthase proteins. The PpACS1a was grouped into type-1 subfamily of plant ACS based on its conserved domain and phylogenetic status. Real-time quantitative PCR indicated that PpACS1a was differentially expressed in pear tissues and predominantly expressed in anthers. The expression signal of PpACS1a was also detected in fruit and leaves, but no signal was detected in shoots and petals. Furthermore, the PpACS1a expression was regulated during fruit ripening. In addition, the PpACS1a gene expression was regulated by salicylic acid (SA) and indole-3-acetic acid (IAA) in fruit. Moreover, the expression of the PpACS1a was up-regulated in diseased pear fruit. These results indicated that PpACS1a might be involved in fruit ripening and response to SA, IAA and disease.


Asunto(s)
Frutas/genética , Liasas/biosíntesis , Pyrus/genética , Aminoácidos Cíclicos/metabolismo , Frutas/efectos de los fármacos , Frutas/enzimología , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Ácidos Indolacéticos/administración & dosificación , Liasas/genética , Filogenia , Pyrus/efectos de los fármacos , Pyrus/enzimología , Pyrus/crecimiento & desarrollo , Ácido Salicílico/administración & dosificación
10.
G Ital Nefrol ; 30(2)2013.
Artículo en Italiano | MEDLINE | ID: mdl-23832454

RESUMEN

Hydrogen sulfide, (H2S), is an endogenous gas which exerts a protective function in several biological processes, including those involved in inflammation, blood pressure regulation, and energy metabolism. The enzymes involved in H2S production are cysthationine -synthetase, cysthationine -lyase and 3-mercaptopyruvate sulfurtransferase. Low plasma H2S levels have been found in chronic renal failure (CRF) in both humans and animal models. The mechanisms leading to H2S deficiency in CRF are linked to reduced gene expression of cysthationine -lyase. Intense research is currently under way to discover the link between low H2S levels, CRF progression and the uremic syndrome and to determine whether therapeutic interventions aimed at increasing H2S levels might benefit these patients.


Asunto(s)
Sulfuro de Hidrógeno/metabolismo , Fallo Renal Crónico/fisiopatología , Liasas/fisiología , Vasodilatación/fisiología , Animales , Apoptosis , Proteínas Reguladoras de la Apoptosis/biosíntesis , Proteínas Reguladoras de la Apoptosis/genética , Presión Sanguínea/fisiología , Enfermedades Cardiovasculares/fisiopatología , Células Cultivadas , Cisteína/metabolismo , Progresión de la Enfermedad , Inducción Enzimática , Homocisteína/metabolismo , Humanos , Inflamación , Riñón/metabolismo , Riñón/fisiopatología , Peroxidación de Lípido , Liasas/biosíntesis , Liasas/genética , Ratones , Ratones Noqueados , Estrés Oxidativo , Ratas
11.
Biochem Biophys Res Commun ; 435(2): 255-9, 2013 May 31.
Artículo en Inglés | MEDLINE | ID: mdl-23643787

RESUMEN

Tuberculosis is a lethal infectious disease caused by Mycobacterium tuberculosis. We determined the crystal structure of Rv2606c, a potential pyridoxal biosynthesis lyase (PdxS), from M. tuberculosis H37Rv at 1.8 Å resolution. The overall structure of the protein, composed of a (ß/α)8-barrel and two small 310-helices, was quite similar to those of other PdxS proteins. A glycerol molecule was observed to be bound at the active site of the Rv2606c structure through interactions with the conserved residues of Asp29 and Lys86, providing information regarding the potential active site and the substrate-binding environment of the protein. The interface for Rv2606c dodecamerization, which is primarily mediated by salt bridges and hydrophobic interactions, was quite different from those of other PdxS proteins. Furthermore, we observed that the Rv2606c and Rv2604c form a stable complex, suggesting that these proteins might function as PdxS and PdxT in M. tuberculosis.


Asunto(s)
Proteínas Bacterianas/química , Proteínas Bacterianas/ultraestructura , Liasas/química , Liasas/ultraestructura , Mycobacterium tuberculosis/química , Piridoxal/química , Secuencia de Aminoácidos , Liasas/biosíntesis , Datos de Secuencia Molecular , Conformación Proteica
12.
Proc Natl Acad Sci U S A ; 110(21): E1963-71, 2013 May 21.
Artículo en Inglés | MEDLINE | ID: mdl-23650359

RESUMEN

WRKY transcription factors are key players in the plant immune response, but less is known about their involvement in antiviral defense than about their roles in defense against bacterial or fungi pathogens. Here, we report that Arabidopsis thaliana WRKY DNA-binding protein 8 (WRKY8) has a role in mediating the long-distance movement of crucifer-infecting tobacco mosaic virus (TMV-cg). The expression of WRKY8 was inhibited by TMV-cg infection, and mutation of WRKY8 accelerated the accumulation of TMV-cg in systemically infected leaves. Quantitative RT-PCR analysis showed that the expression of ABA insensitive 4 (ABI4) was reduced and the expression of 1-aminocyclopropane-1-carboxylic acid synthase 6 (ACS6) and ethylene response factor 104 (ERF104) was enhanced in the systemically infected leaves of wrky8. Immunoprecipitation assays demonstrated that WRKY8 could bind selectively to putative W-boxes of the ABI4, ACS6, and ERF104 promoters. Furthermore, TMV-cg infection enhanced WRKY8 binding to the ABI4 promoter but reduced the binding of WRKY8 to the ACS6 and ERF104 promoters, indicating that regulation of ABI4, ACS6, and ERF104 by WRKY8 is at least partially dependent on TMV-cg. Exogenous applications of abscisic acid (ABA) reduced the systemic accumulation of TMV-cg. Mutations in ABA deficient 1, ABA deficient 2, ABA deficient 3, or abi4 accelerated systemic TMV-cg accumulation. In contrast, exogenous application of aminocyclopropane-1-carboxylic acid enhanced the systemic accumulation of TMV-cg, but mutations in acs6, erf104, or an octuple acs mutant inhibited systemic TMV-cg accumulation. Our results demonstrate that WRKY8 is involved in the defense response against TMV-cg through the direct regulation of the expression of ABI4, ACS6, and ERF104 and may mediate the crosstalk between ABA and ethylene signaling during the TMV-cg-Arabidopsis interaction.


Asunto(s)
Ácido Abscísico/metabolismo , Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Arabidopsis/virología , Etilenos/metabolismo , Enfermedades de las Plantas/virología , Transducción de Señal , Virus del Mosaico del Tabaco/metabolismo , Factores de Transcripción/metabolismo , Ácido Abscísico/farmacología , Arabidopsis/genética , Proteínas de Arabidopsis/biosíntesis , Proteínas de Arabidopsis/genética , Regulación de la Expresión Génica de las Plantas/genética , Liasas/biosíntesis , Liasas/genética , Mutación , Enfermedades de las Plantas/genética , Reguladores del Crecimiento de las Plantas/metabolismo , Reguladores del Crecimiento de las Plantas/farmacología , Inmunidad de la Planta/genética , Elementos de Respuesta/genética , Virus del Mosaico del Tabaco/genética , Factores de Transcripción/biosíntesis , Factores de Transcripción/genética
13.
Prep Biochem Biotechnol ; 42(1): 60-76, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22239708

RESUMEN

DDT-dehydrohalogenase is involved in the catalytic degradation of p,p'-DDT by eliminating either HCl or Cl(-) to form DDD/DDE. Isolation, purification and characterization of DDT-dehydrohalogenase from a bacterial source is reported in this manuscript. Ten bacterial cultures belonging to DDT degrading microbial consortium were screened for the DDT-dehydrohalogenase activity. Among these, the clarified cell homogenate of Pseudomonas putida T5 showed higher DDT-dehydrohalogenase activity and enzyme was purified to apparent homogeneity with 73% overall recovery. The relative molecular mass of the enzyme estimated by the SDS PAGE method was ∼32 kDa. Native PAGE revealed the presence of a single band. The purity of the enzyme was confirmed by HPLC and capillary electrophoresis. The enzyme was stable for 4-5 h at pH 7.0 at the temperature optima of 37 °C. The K( m ) and V( max ), values for DDT-dehydrohalogenase were 3.7 µM and 6.8 µM min(-1), respectively. The enzyme was a glycoprotein with mannose forming the backbone. AIG-formed the N-terminus chain. Serine and tryptophan appeared to be involved at the active site. The enzyme appeared to be a metalloprotein containing Zn, Mg, and Ca ions. Monovalent and divalent cations (1 mM) inhibited the enzyme strongly. The primary sequence of HPLC purified enzyme was deduced by LC-MS-MALDI-ESI.


Asunto(s)
Liasas/aislamiento & purificación , Liasas/metabolismo , Pseudomonas putida/enzimología , Secuencia de Aminoácidos , Inhibidores Enzimáticos , Estabilidad de Enzimas , Concentración de Iones de Hidrógeno , Cinética , Liasas/antagonistas & inhibidores , Liasas/biosíntesis , Datos de Secuencia Molecular , Peso Molecular , Pseudomonas putida/metabolismo , Especificidad por Sustrato , Temperatura
14.
Biochim Biophys Acta ; 1817(6): 911-9, 2012 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-21945855

RESUMEN

The reconstitution of biosynthetic pathways from heterologous hosts can help define the minimal genetic requirements for pathway function and facilitate detailed mechanistic studies. Each of the three pathways for the assembly of cytochrome c in nature (called systems I, II, and III) has been shown to function recombinantly in Escherichia coli, covalently attaching heme to the cysteine residues of a CXXCH motif of a c-type cytochrome. However, recombinant systems I (CcmABCDEFGH) and II (CcsBA) function in the E. coli periplasm, while recombinant system III (CCHL) attaches heme to its cognate receptor in the cytoplasm of E. coli, which makes direct comparisons between the three systems difficult. Here we show that the human CCHL (with a secretion signal) attaches heme to the human cytochrome c (with a signal sequence) in the E. coli periplasm, which is bioenergetically (p-side) analogous to the mitochondrial intermembrane space. The human CCHL is specific for the human cytochrome c, whereas recombinant system II can attach heme to multiple non-cognate c-type cytochromes (possessing the CXXCH motif.) We also show that the recombinant periplasmic systems II and III use components of the natural E. coli periplasmic DsbC/DsbD thiol-reduction pathway. This article is part of a Special Issue entitled: Biogenesis/Assembly of Respiratory Enzyme Complexes.


Asunto(s)
Citocromos c/biosíntesis , Proteínas de Escherichia coli/genética , Oxidorreductasas/genética , Proteína Disulfuro Isomerasas/genética , Proteínas Recombinantes de Fusión/biosíntesis , Compuestos de Sulfhidrilo/química , Secuencia de Aminoácidos , Apoproteínas/biosíntesis , Apoproteínas/química , Apoproteínas/genética , Citocromos c/química , Citocromos c/genética , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas de Escherichia coli/metabolismo , Proteínas de Escherichia coli/fisiología , Eliminación de Gen , Expresión Génica , Hemo/metabolismo , Humanos , Liasas/biosíntesis , Liasas/química , Liasas/genética , Proteínas de Unión a Maltosa/biosíntesis , Proteínas de Unión a Maltosa/química , Proteínas de Unión a Maltosa/aislamiento & purificación , Datos de Secuencia Molecular , Oxidación-Reducción , Oxidorreductasas/metabolismo , Oxidorreductasas/fisiología , Fragmentos de Péptidos/química , Fragmentos de Péptidos/genética , Proteínas Periplasmáticas/biosíntesis , Proteínas Periplasmáticas/química , Proteínas Periplasmáticas/genética , Proteína Disulfuro Isomerasas/metabolismo , Proteína Disulfuro Isomerasas/fisiología , Señales de Clasificación de Proteína , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/genética , Compuestos de Sulfhidrilo/metabolismo
15.
FEBS J ; 278(8): 1367-78, 2011 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-21338470

RESUMEN

Mitogen-activated protein kinase (MAPK) cascades play important roles in mediating pathogen responses and reactive oxygen species signaling. In plants, MAPKs are classified into four major groups (A-D). Previous studies have mainly focused on groups A and B, but little is known about group C. In this study, we functionally characterized a stress-responsive group C MAPK gene (GhMPK2) from cotton. Northern blot analysis indicated that GhMPK2 was induced not only by signaling molecules, such as ethylene and methyl jasmonate, but also by methyl viologen-mediated oxidative stress. Transgenic tobacco (Nicotiana tabacum) plants that overexpress GhMPK2 displayed enhanced resistance to fungal and viral pathogens, and the expression of the pathogenesis-related (PR) genes, including PR1, PR2, PR4, and PR5, was significantly increased. Interestingly, the transcription of 1-aminocyclopropane-1-carboxylic acid synthase (ACS) and 1-aminocyclopropane-1-carboxylic acid oxidase (ACO) was significantly upregulated in transgenic plants, suggesting that GhMPK2 positively regulates ethylene synthesis. Moreover, overexpression of GhMPK2 elevated the expression of several antioxidant enzymes, conferring on transgenic plants enhanced reactive oxygen species scavenging capability and oxidative stress tolerance. These results increased our understanding of the role of the group C GhMPK2 gene in multiple defense-signaling pathways, including those that are involved in responses to pathogen infection and oxidative stress.


Asunto(s)
Gossypium/enzimología , Proteínas Quinasas Activadas por Mitógenos/genética , Enfermedades de las Plantas/prevención & control , Transducción de Señal , Acetatos/farmacología , Aminoácido Oxidorreductasas/biosíntesis , Ciclopentanos/farmacología , Inducción Enzimática , Etilenos/farmacología , Fusarium/patogenicidad , Regulación de la Expresión Génica de las Plantas , Liasas/biosíntesis , Proteínas Quinasas Activadas por Mitógenos/biosíntesis , Estrés Oxidativo , Oxilipinas/farmacología , Phytophthora/patogenicidad , Enfermedades de las Plantas/virología , Plantas Modificadas Genéticamente/metabolismo , Especies Reactivas de Oxígeno/metabolismo , Transducción de Señal/genética , Nicotiana/genética , Nicotiana/metabolismo , Regulación hacia Arriba
16.
Methods Enzymol ; 486: 429-46, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-21185447

RESUMEN

Respiratory nitrogen cycle processes like nitrification, nitrate reduction, denitrification, nitrite ammonification, or anammox involve a variety of dissimilatory enzymes and redox-active cofactors. In this context, an intriguing protein class are cytochromes c, that is, enzymes containing one or more covalently bound heme groups that are attached to heme c binding motifs (HBMs) of apo-cytochromes. The key enzyme of the corresponding maturation process is cytochrome c heme lyase (CCHL), an enzyme that catalyzes the formation of two thioether linkages between two vinyl side chains of a heme and two cysteine residues arranged in the HBM. In recent years, many multiheme cytochromes c involved in nitrogen cycle processes, such as hydroxylamine oxidoreductase and cytochrome c nitrite reductase, have attracted particular interest. Structurally, these enzymes exhibit conserved heme packing motifs despite displaying very different enzymic properties and largely unrelated primary structures. The functional and structural characterization of cytochromes c demands their purification in sufficient amounts as well as the feasibility to generate site-directed enzyme variants. For many interesting organisms, however, such systems are not available, mainly hampered by genetic inaccessibility, slow growth rates, insufficient cell yields, and/or a low capacity of cytochrome c formation. Efficient heterologous cytochrome c overproduction systems have been established using the unrelated proteobacterial species Escherichia coli and Wolinella succinogenes. In contrast to E. coli, W. succinogenes uses the cytochrome c biogenesis system II and contains a unique set of three specific CCHL isoenzymes that belong to the unusual CcsBA-type. Here, W. succinogenes is presented as host for cytochrome c overproduction focusing on a recently established gene expression system designed for large-scale production of multiheme cytochromes c.


Asunto(s)
Proteínas Recombinantes/biosíntesis , Wolinella/enzimología , Wolinella/genética , Wolinella/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/fisiología , Grupo Citocromo c , Citocromos a1/biosíntesis , Citocromos c/genética , Citocromos c/fisiología , Citocromos c1/biosíntesis , Desnitrificación , Hemo/análogos & derivados , Hemo/genética , Hemo/metabolismo , Liasas/biosíntesis , Liasas/fisiología , Nitrato Reductasas/biosíntesis , Nitrificación , Oxidorreductasas/genética , Oxidorreductasas/metabolismo , Transformación Bacteriana
17.
Huan Jing Ke Xue ; 30(8): 2479-84, 2009 Aug 15.
Artículo en Chino | MEDLINE | ID: mdl-19799320

RESUMEN

The dcmR gene encoding dichloromethane dehalogenase was amplified by PCR from Bacillus circulans WZ-12 and cloned to expression vector pET28b(+), yielding recombinant plasmid pET28b(+)-dcmR. Then plasmid pET28b(+)-dcmR was introduced into Escherichia. coli BL21(DE3). Expression was induced by IPTG,and the enzyme activity reached 25.78 U/mL, the specific enzyme activity reached 88.86 U/mg protein.The periplasmic and cytoplasmic enzyme activity reached 2.92 U/mL and 22.86 U/mL respectively.All results analysis demonstrated that the E. coli. strain carrying the dcmR gene could produce dichloromethane dehalogenase efficiently. The growth characteristics of dcmR-1 was compared with the original strain, and the result showed that there was no difference, A(600nm) of dcmR-1 in LB medium could reach about 2.4 in logarithmic period,which was the same as that of the original strain. The recombinant strain dcmR-1 showed the higher degrading ability than Bacillus circulans WZ-12 and with more than 90% removal efficiency of 120 mmol/L CH2Cl2 in 25 h. All these results indicated that recombinant strain dcmR-1 was a promising strain in bioremediation of CH2Cl2 contaminated environment.


Asunto(s)
Bacillus/enzimología , Bacillus/genética , Proteínas Bacterianas/biosíntesis , Liasas/biosíntesis , Proteínas Bacterianas/genética , Clonación Molecular , Escherichia coli/genética , Escherichia coli/metabolismo , Liasas/genética , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética
18.
Plant Physiol Biochem ; 46(1): 54-63, 2008 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-17964177

RESUMEN

Ethylene induced cotton (Gossypium hirsutum var RST-39) leaf abscission has been characterized by measuring the activities of ACC synthase (ACS, E.C. 4.4.1.14), ACC oxidase (ACO, E.C. 1.14.17.4) and cellulase (E.C. 3.2.1.4). In addition, a leaf abscission specific cDNA (GhCel1) has been cloned from cotton, which belongs to the alpha(2) subgroup of cellulases that possess a C-terminus carbohydrate-binding domain. Measurement of enzyme activity in the abscission zones of cotton leaf explants exposed to ethylene for 48h compared to non-treated controls indicated a more than 5-fold increase in the activity of ACS, 1.2-fold increase in the activity of ACO and about 2.7-fold increase in the activity of cellulase in the ethylene treated explants. This increase was accompanied by a substantial decrease in the force required to separate the petiole from the stem (break strength) and an increased accumulation of cellulase transcript in the abscission zone. Treatment of explants with 1-Methylcyclopropene (1-MCP) prior to ethylene resulted in significant inhibition of enzyme activities and transcript accumulation. It is concluded that ethylene response of cotton leaf abscission leads to higher cellulase expression and increased activities of ethylene biosynthesis enzymes in the abscission zone.


Asunto(s)
Celulasa/biosíntesis , Etilenos/metabolismo , Regulación Enzimológica de la Expresión Génica/fisiología , Regulación de la Expresión Génica de las Plantas/fisiología , Gossypium/enzimología , Hojas de la Planta/enzimología , Proteínas de Plantas/biosíntesis , Ácido Abscísico/biosíntesis , Aminoácido Oxidorreductasas/biosíntesis , Aminoácido Oxidorreductasas/genética , Celulasa/genética , Clonación Molecular , Ciclopropanos/metabolismo , Etilenos/farmacología , Regulación Enzimológica de la Expresión Génica/efectos de los fármacos , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Gossypium/genética , Liasas/biosíntesis , Liasas/genética , Reguladores del Crecimiento de las Plantas/metabolismo , Reguladores del Crecimiento de las Plantas/farmacología , Hojas de la Planta/genética , Proteínas de Plantas/genética , Estructura Terciaria de Proteína/fisiología , Factores de Tiempo
19.
J Appl Microbiol ; 104(4): 1042-50, 2008 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-18042186

RESUMEN

AIM: To investigate the possibility of finding a new homocysteine (Hcy) gamma-lyase with the desired properties for Hcy measurement in bacteria. METHODS AND RESULTS: Through a process of enrichment, the Hcy gamma-lyase-producing bacterium strain N2-1 was isolated from soil. Based upon its morphological, physiological, and biochemical characteristics, as well as its 16S rDNA sequence and phylogenetic tree analysis, this isolate belongs to the genus Serratia. The effects of pH, aeration, inducers, carbon (C) and nitrogen (N) sources on enzyme production were studied. Methionine, yeast extract, and glucose were selected as the optimal inducer, C and N sources, respectively. Maximum production of Hcy gamma-lyase was obtained when the isolate was cultured at 30 degrees C at pH 6.5 for about 36 h in the optimum medium. Results also showed that this Hcy gamma-lyase has relatively high specificity towards Hcy. CONCLUSIONS: Because of its high specificity for Hcy, this bacterial Hcy gamma-lyase has the potential application in Hcy determination. SIGNIFICANCE AND IMPACT OF THE STUDY: In addition to isolating a bacterium that produces Hcy gamma-lyase suitable for Hcy determination, this study also indicates that the bacterium could be a source for production of Hcy gamma-lyase for clinical applications.


Asunto(s)
Liasas/biosíntesis , Serratia/aislamiento & purificación , Serratia/metabolismo , Microbiología del Suelo , Técnicas Bacteriológicas , Biomasa , Reactores Biológicos , Carbono , Estabilidad de Enzimas , Homocisteína/análisis , Concentración de Iones de Hidrógeno , Metionina/farmacología , Nitrógeno/farmacología , Fosfato de Piridoxal/farmacología , Serratia/crecimiento & desarrollo , Estimulación Química
20.
Prikl Biokhim Mikrobiol ; 43(1): 53-8, 2007.
Artículo en Ruso | MEDLINE | ID: mdl-17345859

RESUMEN

A shortening of the lag phase in dichloromethane (DCM) consumption was observed in the methylobacteria Methylopila helvetica DM6 and Albibacter methylovorans DM10 after prior growth on methanol with the presence of 1.5% NaCI. Neither heat nor acid stress accelerated methylobacterium adaptation to DCM consumption. Sodium azide (1 mM) and potassium cyanide (1 mM) inhibited consumption of DCM by these degraders but not by transconjugants Methylobacterium extorquens AM1, expressing DCM dehalogenase but unable to grow on DCM. This indicates that the degrader strains possess energy-dependent systems of transport of DCM or chloride anions produced during DCM dehalogenation. Inducible proteins were found in the membrane fraction of A. methylovorans DM10 cells adapted to DCM and elevated NaCl concentration.


Asunto(s)
Cloruro de Metileno/metabolismo , Methylobacterium/fisiología , Adaptación Fisiológica , Proteínas Bacterianas/metabolismo , Conjugación Genética , Liasas/biosíntesis , Proteínas de la Membrana/metabolismo , Metanol/metabolismo , Methylobacterium/enzimología , Methylobacterium/crecimiento & desarrollo , Cianuro de Potasio/metabolismo , Azida Sódica/metabolismo , Cloruro de Sodio/metabolismo
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