RESUMEN
Arabinogalactan-proteins (AGPs), important signalling molecules of the plant cell wall, are structurally extensively investigated in angiosperms, but information on AGPs in gymnosperms is still limited. We characterized AGPs from the gymnosperms Ginkgo biloba, Ephedra distachya, Encephalartos longifolius and Cycas revoluta. The protein contents are comparable to that of angiosperm AGPs. Hydroxyproline is the site of linking the carbohydrate part and was detected in all AGPs with highest concentration in Cycas AGP (1.1 % of the AGP). Interestingly, with the exception of Cycas, all AGPs contained the monosaccharide 3-O-methylrhamnose not present in angiosperm polysaccharides. The carbohydrate moieties of Cycas and Ephredra showed the main components 1,3,6-linked galactose and terminal arabinose typical of angiosperm AGPs, whereas that of Ginkgo AGP was unique with 1,4-linked galactose as dominant structural element. Bioinformatic search for glycosyltransferases in Ginkgo genome also revealed a lower number of galactosyltransferases responsible for biosynthesis of the 1,3-Gal/1,6-Gal AGP backbone.
Asunto(s)
Pared Celular/química , Cycadopsida/química , Mucoproteínas/química , Evolución Biológica , Secuencia de Carbohidratos , Pared Celular/metabolismo , Biología Computacional , Cycadopsida/clasificación , Cycadopsida/metabolismo , Cycas/química , Cycas/metabolismo , Ephedra/química , Ephedra/metabolismo , Galactanos/química , Ginkgo biloba/química , Ginkgo biloba/metabolismo , Estructura Molecular , Mucoproteínas/aislamiento & purificación , Mucoproteínas/metabolismo , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/metabolismo , Conformación Proteica , Zamiaceae/química , Zamiaceae/metabolismoRESUMEN
In this study, an ultrasonic-extracted polysaccharide (nCPTP-55) was obtained with the highest yield (61.08%, w/w) from tamarind pulp, which consisted chiefly of total sugar (85.98%, w/w) with few protein (2.10%, w/w). Monosaccharide analysis showed nCPTP-55 was mainly composed of arabinose (39.19 mol%) and glucose (50.48 mol%) with negligible GlcA (2.05 mol%), indicating the neutral nature of nCPTP-55, which was further elucidated structurally via GC-MS and NMR, i.e., an arabinoglucan composed of â3)-ß-D-Glcp-(1â backbone with only T-α-L-Araf-(1â branched at O-4 (27.82%) and O-6 (39.99%), resulting in relatively high A/G ratio (0.68-0.70). Based on MM2 minimized energy, the 3D schematic structures of nCPTP-55 could be considered as structural basis for its conformational behavior, which was preliminarily estimated via HPSEC-MALLS as between compact sphere and loosely hyper-branched chain (ρ = 0.84). Therefore, the relationship between molecular structure and conformational behavior was basically established for nCPTP-55, which was in a bid to have a better knowledge of its structure-property and structure-bioactivity relationships potentially required for more applications in food, cosmetic and pharmaceutical fields.
Asunto(s)
Mucoproteínas/química , Polisacáridos/química , Relación Estructura-Actividad , Tamarindus/química , Arabinosa/química , Estructura Molecular , Monosacáridos/química , Mucoproteínas/aislamiento & purificación , Mucoproteínas/ultraestructura , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/ultraestructura , Polisacáridos/aislamiento & purificación , Polisacáridos/ultraestructura , Azúcares/química , Tamarindus/efectos de la radiación , UltrasonidoRESUMEN
Arabinogalactan proteins are a diverse group of cell wall-associated proteoglycans. While structural and molecular genetic analyses have contributed to the emerging improved understanding of the wide-range of biological processes in which AGPs are implicated; the ability to detect, localize, and quantify them is fundamentally important. This chapter describes three methods: histological staining, radial gel diffusion, and colorimetric quantification, each of which utilize the ability of Yariv reagent to bind to AGPs.
Asunto(s)
Proteínas Algáceas/química , Mucoproteínas/análisis , Mucoproteínas/aislamiento & purificación , Proteínas Algáceas/análisis , Proteínas Algáceas/aislamiento & purificación , Proteínas Algáceas/metabolismo , Pared Celular/química , Colorimetría/métodos , Glucósidos , Inmunodifusión/métodos , Mucoproteínas/metabolismo , Floroglucinol/análogos & derivados , Proteínas de Plantas/análisis , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/metabolismo , Coloración y Etiquetado/métodosRESUMEN
A water-soluble polysaccharide (type II arabinogalactan-protein) extracted from the gum exudate of the native New Zealand puka tree (Meryta sinclairii), was characterised for its molecular, rheological and physicochemical properties. In 0.1â¯M NaCl, the weight average molecular weight (Mw) of puka gum is 5.9â¯×â¯106 Da with an RMS radius of 56â¯nm and z-average hydrodynamic radius of 79â¯nm. The intrinsic viscosity of the polysaccharide is 57â¯ml/g with a coil overlap concentration 15% w/w. Together, the shape factor, p, of 0.70 (exponent of RMS radius vs. hydrodynamic radius), Smidsrød-Haug's stiffness parameter B of 0.031 and Mark-Houwink exponent α of 0.375 indicate that the polysaccharide adopts a spherical conformation in solution, similar to gum arabic. The pKa is 1.8. The polysaccharide exhibits a Newtonian to shear-thinning behaviour from 0.2 to 25% w/w. Viscosity of the polysaccharide (1 s-1) decreases with decreasing concentration, increasing temperature, ionic strength, and at acidic pH.
Asunto(s)
Araliaceae/metabolismo , Mucoproteínas/química , Gomas de Plantas/química , Polisacáridos/química , Árboles/metabolismo , Peso Molecular , Mucoproteínas/aislamiento & purificación , Nueva Zelanda , Gomas de Plantas/aislamiento & purificación , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Polisacáridos/aislamiento & purificación , Reología , Solubilidad , ViscosidadRESUMEN
The aim of this study was to chemically characterize an arabinogalactan-protein-rich fraction (FRAGP) obtained from an aqueous extract of avocado leaves and investigate its effects on the classical pathway of the complement system. The FRAGP contained 4.6%⯱â¯1.8%, 22.5%⯱â¯4.9%, and 76.7%⯱â¯8.8% of total protein, arabinogalactan-protein, and carbohydrates, respectively. Arabinose and galactose were the main monosaccharide constituents. FT-IR and NMR data, together with linkage analyses, indicated the presence of a structure that included a (1â¯ââ¯3)-linked ß-D-Galp main chain, mainly substituted at O-6 by Gal and Ara residues, which was characteristic of a type II arabinogalactan. The effect of FRAGP on the classical pathway of complement system was examined by a hemolytic fixation test and comparing with heparin, which was used as a control for inhibition. With pre-incubation, the IC50 of FRAGP was 1.90⯱â¯1.1⯵g/mL, which was similar to that of heparin (IC50â¯=â¯2.90⯱â¯0.3⯵g/mL). Without pre-incubation, the IC50 values were 18.6⯱â¯3.7 and 8.0⯱â¯4.1⯵g/mL for FRAGP and heparin, respectively. Collectively, these results suggested that FRAGP has an inhibitory effect on the classical pathway of the complement system.
Asunto(s)
Proteínas Inactivadoras de Complemento/química , Proteínas del Sistema Complemento/química , Mucoproteínas/química , Persea/química , Arabinosa/química , Proteínas Inactivadoras de Complemento/farmacología , Proteínas del Sistema Complemento/efectos de los fármacos , Galactanos/química , Galactosa/química , Heparina/química , Humanos , Espectroscopía de Resonancia Magnética , Mucoproteínas/aislamiento & purificación , Mucoproteínas/farmacología , Extractos Vegetales/química , Extractos Vegetales/farmacología , Hojas de la Planta/química , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/farmacología , Espectroscopía Infrarroja por Transformada de FourierRESUMEN
The aim of this study was to investigate the chemical structure and biological activity of a pectic fraction isolated from the aerial parts of A. campestris L. subsp. maritima Arcangeli. The chemical and spectroscopic analyses of the pectic fraction (ACP-E10) demonstrated that ACP-E10 was composed of homogalacturonan (HG) (60%) and rhamnogalacturonan-I (RG-I) (29%) regions. Side chains of the RG-I included mainly branched arabinans and type II arabinogalactans (AG-II). The molar mass of ACP-E10 determined by HPSEC-MALLS was 16,600g/mol. ACP-E10 was evaluated for its gastroprotective effect against ethanol-induced gastric lesions in rats. Oral pretreatment of animals with ACP-E10 (0.3, 3 and 30mg/kg) significantly reduced gastric lesions by 77±7.9%, 55±11.1% and 65±11.8%. ACP-E10 also maintained mucus and glutathione (GSH) contents in the gastric mucosa. In addition, ACP-E10 demonstrated antioxidant activity in vitro by the DPPH assay. These results demonstrated that the pectin from A. campestris had significant gastroprotective effects in vivo, which were likely attributable to their capacity to increase the protective defenses of gastric mucosa.
Asunto(s)
Antiulcerosos/química , Pectinas/química , Úlcera Gástrica/tratamiento farmacológico , Animales , Antiulcerosos/administración & dosificación , Antiulcerosos/aislamiento & purificación , Artemisia/química , Etanol/toxicidad , Mucosa Gástrica/efectos de los fármacos , Mucosa Gástrica/patología , Humanos , Mucoproteínas/química , Mucoproteínas/aislamiento & purificación , Pectinas/administración & dosificación , Pectinas/aislamiento & purificación , Fitoterapia , Hojas de la Planta/química , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Polisacáridos/química , Polisacáridos/aislamiento & purificación , Ratas , Úlcera Gástrica/inducido químicamente , Úlcera Gástrica/patologíaRESUMEN
The lysin motif (LysM) containing proteins can bind chitin and are ubiquitous in various organisms including fungi. In plant pathogenic fungi, a few LysM proteins have been characterized as effectors to suppress chitin-induced immunity in plant hosts and therefore contribute to fungal virulence. The effector mechanism is still questioned in fungus-animal interactions. In this study, we found that LysM proteins are also present in animal pathogenic fungi and have evolved divergently. The genome of the insect pathogen Beauveria bassiana encodes 12 LysM proteins, and the genes were differentially transcribed by the fungus when grown in different conditions. Deletion of six genes that were expressed by the fungus growing in insects revealed that two, Blys2 and Blys5, were required for full fungal virulence. Both proteins could bind chitin and Blys5 (containing two LysM domains) could additionally bind chitosan and cellulose. Truncation analysis of Blys2 (containing five LysM domains) indicated that the combination of LysM domains could determine protein-binding affinity and specificity for different carbohydrates. Relative to the wild-type strain, loss of Blys2 or Blys5 could impair fungal propagation in insect hemocoels and lead to the upregulation of antifungal gene in insects. Interestingly, the virulence defects of ΔBlys2 and ΔBlys5 could be fully restored by complementation with the Slp1 effector from the rice blast fungus Magnaporthe oryzae. In contrast to Slp1 and Blys2, Blys5 could potentially protect fungal hyphae against chitinase hydrolysis. The results of this study not only advance the understanding of LysM protein evolution but also establish the effector mechanism of fungus-animal interactions.
Asunto(s)
Beauveria/inmunología , Genes Fúngicos/inmunología , Magnaporthe/inmunología , Mucoproteínas/aislamiento & purificación , Magnaporthe/genética , VirulenciaRESUMEN
The study was focused on assessing the presence of arabinogalactan proteins (AGPs) and pectins within the cell walls as well as prenyl lipids, sodium and chlorine content in leaves of Tilia x euchlora trees. The leaves that were analyzed were collected from trees with and without signs of damage that were all growing in the same salt stress conditions. The reason for undertaking these investigations was the observations over many years that indicated that there are trees that present a healthy appearance and trees that have visible symptoms of decay in the same habitat. Leaf samples were collected from trees growing in the median strip between roadways that have been intensively salted during the winter season for many years. The sodium content was determined using atomic spectrophotometry, chloride using potentiometric titration and poly-isoprenoids using HPLC/UV. AGPs and pectins were determined using immunohistochemistry methods. The immunohistochemical analysis showed that rhamnogalacturonans I (RG-I) and homogalacturonans were differentially distributed in leaves from healthy trees in contrast to leaves from injured trees. In the case of AGPs, the most visible difference was the presence of the JIM16 epitope. Chemical analyses of sodium and chloride showed that in the leaves from injured trees, the level of these ions was higher than in the leaves from healthy trees. Based on chromatographic analysis, four poly-isoprenoid alcohols were identified in the leaves of T. x euchlora. The levels of these lipids were higher in the leaves from healthy trees. The results suggest that the differences that were detected in the apoplast and symplasm may be part of the defensive strategy of T. x euchlora trees to salt stress, which rely on changes in the chemical composition of the cell wall with respect to the pectic and AGP epitopes and an increased synthesis of prenyl lipids.
Asunto(s)
Adaptación Fisiológica , Pared Celular/efectos de los fármacos , Lípidos/biosíntesis , Cloruro de Sodio/farmacología , Estrés Fisiológico , Terpenos/metabolismo , Tilia/efectos de los fármacos , Alcoholes/aislamiento & purificación , Alcoholes/metabolismo , Pared Celular/química , Pared Celular/metabolismo , Lípidos/aislamiento & purificación , Mucoproteínas/biosíntesis , Mucoproteínas/aislamiento & purificación , Pectinas/biosíntesis , Pectinas/aislamiento & purificación , Hojas de la Planta/efectos de los fármacos , Hojas de la Planta/metabolismo , Proteínas de Plantas/biosíntesis , Proteínas de Plantas/aislamiento & purificación , Salinidad , Suelo/química , Terpenos/aislamiento & purificación , Tilia/metabolismo , Árboles/efectos de los fármacos , Árboles/metabolismoRESUMEN
Plant derived arabinogalactan proteins (AGP) were repeatedly confirmed as immunologically as well as dermatologically active compounds. However, little is currently known regarding their potential activity toward skin innate immunity. Here, we extracted and purified AGP from acacia (Acacia senegal) and baobab (Adansonia digitata) seeds to investigate their biological effects on the HaCaT keratinocyte cell line in an in vitro system. While AGP from both sources did not exhibit any cytotoxic effect, AGP from acacia seeds enhanced cell viability. Moreover, real-time quantitative reverse transcription-polymerase chain reaction (qRT-PCR) analysis showed that AGP extracted from both species induced a substantial overexpression of hBD-2, TLR-5, and IL1-α genes. These data suggest that plant AGP, already known to control plant defensive processes, could also modulate skin innate immune responses. J. Cell. Physiol. 232: 2558-2568, 2017. © 2016 Wiley Periodicals, Inc.
Asunto(s)
Acacia/química , Adansonia/química , Inmunidad Innata/efectos de los fármacos , Factores Inmunológicos/farmacología , Queratinocitos/efectos de los fármacos , Mucoproteínas/farmacología , Semillas/química , Piel/efectos de los fármacos , Línea Celular , Relación Dosis-Respuesta a Droga , Humanos , Factores Inmunológicos/química , Factores Inmunológicos/aislamiento & purificación , Interleucina-1alfa/genética , Interleucina-1alfa/metabolismo , Queratinocitos/inmunología , Queratinocitos/metabolismo , Mucoproteínas/química , Mucoproteínas/aislamiento & purificación , Fitoterapia , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/farmacología , Plantas Medicinales , Conformación Proteica , Reacción en Cadena en Tiempo Real de la Polimerasa , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Piel/inmunología , Piel/metabolismo , Factores de Tiempo , Receptor Toll-Like 6/genética , Receptor Toll-Like 6/metabolismo , Regulación hacia Arriba , beta-Defensinas/genética , beta-Defensinas/metabolismoRESUMEN
Polymers with different structures were isolated from the aboveground part of Heracleum sosnowskyi Manden. The sequential treatment of Heracleum with water, HCl solution, and (NH4)2C2O4 solution was observed to decrease the arabinogalactan proteins (AGP) content and increase the pectins content in the extracted polysaccharides. The linear region of the HSO-I polysaccharide having the highest yield was found to be composed mainly of partially methylesterified homogalacturonan fragments, whereas the branched region was made up of fragments of rhamnogalacturonan I whose core represents 1,2-α-L-rhamno-1,4-α-D-galacturonan. The carbohydrate side chains of the branched region are linked to the α-L-Rhap core residues via the 1,4-glycosidic bond and consist chiefly of T-ß-D-Galp, 1,4-ß-D-Galp and 1,6-ß-D-Galp residues indicating the presence of the 1,4-ß-D-galactan. NMR spectroscopy revealed the carbohydrate moiety of the AGP molecule to consist mainly of 1,3- and 1,3,6-ß-D-Galp residues. The side chains comprised 1,6-ß-D-Galp, terminal 4-O-Me-ß-D-GlcpA, and ß-D-Galp.
Asunto(s)
Heracleum/química , Mucoproteínas/química , Pectinas/química , Secuencia de Carbohidratos , Ácido Clorhídrico/química , Hidrólisis , Datos de Secuencia Molecular , Mucoproteínas/aislamiento & purificación , Ácido Oxálico/química , Pectinas/aislamiento & purificación , Componentes Aéreos de las Plantas/química , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Agua/químicaRESUMEN
BACKGROUND: Vedolizumab is a monoclonal antibody approved for use in ulcerative colitis and Crohn's disease. By specifically binding to α4 ß7 integrin, vedolizumab prevents trafficking of lymphocytes to the gut, thereby interfering with disease pathology. During the clinical development program, the pharmacodynamic effect of vedolizumab was evaluated by 2 flow cytometry receptor occupancy assays: act-1 (ACT-1) and mucosal addressin cell adhesion molecule-1 (MAdCAM-1). Here we describe the development and validation of these assays. METHODS: The ACT-1 assay is a receptor occupancy free-site assay that uses a monoclonal antibody with the same binding epitope as vedolizumab to detect free (unbound) sites on α4 ß7 integrin. The MAdCAM-1 assay used a soluble version of the natural ligand for α4 ß7 integrin to detect free sites. The assays were validated using a fit-for-purpose approach throughout the clinical development of vedolizumab. RESULTS: Both the ACT-1 assay and the MAdCAM-1 assay demonstrated acceptable reproducibility and repeatability. The assays were sufficiently stable to allow for clinical use. During clinical testing the assays demonstrated that vedolizumab was able to saturate peripheral cells at all doses tested. CONCLUSIONS: Two pharmacodynamic receptor occupancy assays were developed and validated to assess the effect of vedolizumab on peripheral blood cells. The results of these assays demonstrated the practical use of flow cytometry to examine pharmacodynamic response in clinical trials.
Asunto(s)
Colitis Ulcerosa/tratamiento farmacológico , Citometría de Flujo , Inmunoglobulinas/aislamiento & purificación , Mucoproteínas/aislamiento & purificación , Péptidos y Proteínas Asociados a Receptores de Factores de Necrosis Tumoral/aislamiento & purificación , Proteínas Adaptadoras Transductoras de Señales , Anticuerpos Monoclonales/administración & dosificación , Anticuerpos Monoclonales/inmunología , Anticuerpos Monoclonales Humanizados/administración & dosificación , Anticuerpos Monoclonales Humanizados/inmunología , Biomarcadores/sangre , Adhesión Celular/inmunología , Moléculas de Adhesión Celular , Colitis Ulcerosa/sangre , Colitis Ulcerosa/inmunología , Humanos , Inmunoglobulinas/sangre , Inmunoglobulinas/inmunología , Integrinas/inmunología , Integrinas/metabolismo , Linfocitos/inmunología , Mucoproteínas/sangre , Mucoproteínas/inmunología , Pacientes , Péptidos y Proteínas Asociados a Receptores de Factores de Necrosis Tumoral/sangre , Péptidos y Proteínas Asociados a Receptores de Factores de Necrosis Tumoral/inmunologíaRESUMEN
Bacteriophage lytic enzymes, either endolysins or virion-associated lysins, have been receiving considerable attention as potential antibacterial agents, particularly for the combat of antibiotic-resistant Gram-positive pathogens. A conclusion that easily emerges from the careful analysis of a great number of reports on the field is that the activity of phage lytic enzymes is rarely studied in conditions that support robust growth of the target bacteria. Here, we report the construction and study of a chimerical lysin, EC300, which was designed to target and kill Enterococcus faecalis in conditions supporting vigorous bacterial growth. EC300 resulted from the fusion of a predicted M23 endopeptidase domain of a virion-associated lysin to the putative cell wall binding domain of a previously characterized amidase endolysin, both produced by the E. faecalis phage F170/08. This bacteriolysin-like protein exhibited a clear enhanced lytic activity over the parental endolysin when both were assayed in a rich bacterial growth medium. We demonstrate the killing efficacy of EC300 against growing cells of a panel of typed E. faecalis clinical strains with high level of antibiotic resistance. The possible reasons for the marked difference between the lytic performance of EC300 and that of the amidase are discussed.
Asunto(s)
Antibacterianos/farmacología , Bacteriófagos/enzimología , Enterococcus faecalis/efectos de los fármacos , Mucoproteínas/farmacología , Proteínas Virales/farmacología , Antibacterianos/aislamiento & purificación , Antibacterianos/metabolismo , Bacteriófagos/genética , Enterococcus faecalis/crecimiento & desarrollo , Infecciones por Bacterias Grampositivas/microbiología , Humanos , Mucoproteínas/química , Mucoproteínas/genética , Mucoproteínas/aislamiento & purificación , Ingeniería de Proteínas , Proteínas Virales/genética , Proteínas Virales/aislamiento & purificación , Proteínas Virales/metabolismoRESUMEN
The ß-D-Glc Yariv reagent is frequently used to isolate and to study the structure of arabinogalactan-proteins with the arabinogalactan type II structure. The present paper describes the aggregation features of the Yariv reagent in water, salt solutions and in organic solvents as determined by NMR, absorption spectroscopy and light scattering experiments. The results indicate that in water the Yariv reagent forms aggregates of up to 300 units and in 1% aqueous NaCl the degree of aggregation is approx. 150. The aggregates are formed both by H-bonds and hydrophobic interactions, the former appearing to be of most importance in water. The interaction between the Yariv reagent and an AGP fraction from gum arabic, showed a degree of aggregation of the Yariv reagent when using 1% NaCl to be of approx. 150 units, whereas disruption of the aggregate took place in 10% NaCl with an aggregation number of approx. 100. Partial acid hydrolysis of an AGP from gum Arabic (Acacia Senegal) and analyses of the linkage types remaining indicated that a certain length of (1â3)-ß-linked galactose units was necessary for binding between the Yariv reagent and the AGP. This is in accordance to what also was recently observed by Kitazawa et al. (2013).
Asunto(s)
Glucósidos/química , Goma Arábiga/química , Mucoproteínas/química , Floroglucinol/análogos & derivados , Difusión , Dimetilsulfóxido/química , Dimetilformamida/química , Guanidina/química , Mucoproteínas/aislamiento & purificación , Resonancia Magnética Nuclear Biomolecular , Floroglucinol/química , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Dispersión de Radiación , Cloruro de Sodio/química , Solventes/química , Urea/química , Agua/químicaRESUMEN
BACKGROUND AND AIMS: Arabinogalactan protein 31 (AGP31) is a remarkable plant cell-wall protein displaying a multi-domain organization unique in Arabidopsis thaliana: it comprises a predicted signal peptide (SP), a short AGP domain of seven amino acids, a His-stretch, a Pro-rich domain and a PAC (PRP-AGP containing Cys) domain. AGP31 displays different O-glycosylation patterns with arabinogalactans on the AGP domain and Hyp-O-Gal/Ara-rich motifs on the Pro-rich domain. AGP31 has been identified as an abundant protein in cell walls of etiolated hypocotyls, but its function has not been investigated thus far. Literature data suggest that AGP31 may interact with cell-wall components. The purpose of the present study was to identify AGP31 partners to gain new insight into its function in cell walls. METHODS: Nitrocellulose membranes were prepared by spotting different polysaccharides, which were either obtained commercially or extracted from cell walls of Arabidopsis thaliana and Brachypodium distachyon. After validation of the arrays, in vitro interaction assays were carried out by probing the membranes with purified native AGP31 or recombinant PAC-V5-6xHis. In addition, dynamic light scattering (DLS) analyses were carried out on an AGP31 purified fraction. KEY RESULTS: It was demonstrated that AGP31 interacts through its PAC domain with galactans that are branches of rhamnogalacturonan I. This is the first experimental evidence that a PAC domain, also found as an entire protein or a domain of AGP31 homologues, can bind carbohydrates. AGP31 was also found to bind methylesterified polygalacturonic acid, possibly through its His-stretch. Finally, AGP31 was able to interact with itself in vitro through its PAC domain. DLS data showed that AGP31 forms aggregates in solution, corroborating the hypothesis of an auto-assembly. CONCLUSIONS: These results allow the proposal of a model of interactions of AGP31 with different cell-wall components, in which AGP31 participates in complex supra-molecular scaffolds. Such scaffolds could contribute to the strengthening of cell walls of quickly growing organs such as etiolated hypocotyls.
Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Brachypodium/metabolismo , Pared Celular/metabolismo , Mucoproteínas/metabolismo , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/aislamiento & purificación , Brachypodium/genética , Galactanos/metabolismo , Glicosilación , Modelos Biológicos , Mucoproteínas/genética , Mucoproteínas/aislamiento & purificación , Pectinas/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/metabolismo , Polisacáridos/aislamiento & purificación , Polisacáridos/metabolismo , Unión Proteica , Estructura Terciaria de Proteína , Proteínas Recombinantes , Plantones/genética , Plantones/metabolismo , Nicotiana/genética , Nicotiana/metabolismoRESUMEN
Fruit extracts from black currants (Ribes nigrum L.) are traditionally used for treatment of gastritis based on seed polysaccharides that inhibit the adhesion of Helicobacter pylori to stomach cells. For detailed investigations an arabinogalactan protein (F2) was isolated from seeds and characterized concerning molecular weight, carbohydrate, amino acid composition, linkage, configuration and reaction with ß-glucosyl Yariv. Functional testing of F2 was performed by semiquantitative in situ adhesion assay on sections of human gastric mucosa and by quantitative in vitro adhesion assay with FITC-labled H. pylori strain J99 and human stomach AGS cells. Bacterial adhesins affected were identified by overlay assay with immobilized ligands. ¹²5I-radiolabeled F2 served for binding studies to H. pylori and interaction experiments with BabA and SabA. F2 had no cytotoxic effects against H. pylori and AGS cells; but inhibited bacterial binding to human gastric cells. F2 inhibited the binding of BabA and fibronectin-binding adhesin to its specific ligands. Radiolabeled F2 bound non-specifically to different strains of H. pylori; and to BabA deficient mutant. F2 did not lead to subsequent feedback regulation or increased expression of adhesins or virulence factors. From these data the non-specific interactions between F2 and the H. pylori lead to moderate antiadhesive effects.
Asunto(s)
Adhesión Bacteriana/efectos de los fármacos , Helicobacter pylori/efectos de los fármacos , Mucoproteínas/farmacología , Ribes/química , Semillas/química , Adhesinas Bacterianas/genética , Carbohidratos/química , Línea Celular , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Helicobacter pylori/genética , Humanos , Estructura Molecular , Peso Molecular , Mucoproteínas/química , Mucoproteínas/aislamiento & purificación , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/farmacologíaRESUMEN
Arabinogalactan-protein complex (AGP), isolated from freeze-dried instant coffee powder of Coffea arabica beans, was subjected to ion-exchange chromatography. Stepwise elution with water and solutions of sodium chloride with increasing ionic strength afforded eight fractions (F1-F8). Chemical analyses have shown that compositions of individual conjugates varied in carbohydrate and protein contents, molecular mass and slightly in monosaccharide composition. Protein content was increasing by increasing ionic strength of the eluent and it was confirmed also by FT-IR spectra. NMR study has shown that carbohydrate moieties in individual ion exchange fractions differed in the degree of backbone and side chains branching. Performed study has confirmed a molecular heterogeneity of arabinogalactan-protein complex present in a commercial instant coffee.
Asunto(s)
Coffea/química , Monosacáridos/química , Mucoproteínas/química , Semillas/química , Fraccionamiento Químico , Cromatografía por Intercambio Iónico , Espectroscopía de Resonancia Magnética , Peso Molecular , Monosacáridos/aislamiento & purificación , Mucoproteínas/aislamiento & purificación , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Polvos/química , Espectroscopía Infrarroja por Transformada de FourierRESUMEN
Arabinogalactan proteins (AGPs) are involved in many aspects of plant development. In this study, biochemical and genetic approaches demonstrated that AGPs are abundant in developing fibers and may be involved in fiber initiation and elongation. To further investigate the role of AGPs during fiber development, a fasciclin-like arabinogalactan protein gene (GhFLA1) was identified in cotton (Gossypium hirsutum). Overexpression of GhFLA1 in cotton promoted fiber elongation, leading to an increase in fiber length. In contrast, suppression of GhFLA1 expression in cotton slowed down fiber initiation and elongation. As a result, the mature fibers of the transgenic plants were significantly shorter than those of the wild type. In addition, expression levels of GhFLAs and the genes related to primary cell wall biosynthesis were remarkably enhanced in the GhFLA1 overexpression transgenic fibers, whereas the transcripts of these genes were dramatically reduced in the fibers of GhFLA1 RNA interference plants. An immunostaining assay indicated that both AGP composition and primary cell wall composition were changed in the transgenic fibers. The levels of glucose, arabinose, and galactose were also altered in the primary cell wall of the transgenic fibers compared with those of the wild type. Together, our results suggested that GhFLA1 may function in fiber initiation and elongation by affecting AGP composition and the integrity of the primary cell wall matrix.
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Fibra de Algodón , Gossypium/crecimiento & desarrollo , Mucoproteínas/metabolismo , Proteínas de Plantas/metabolismo , Western Blotting , Pared Celular/efectos de los fármacos , Pared Celular/metabolismo , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Genes de Plantas/genética , Glucósidos/farmacología , Gossypium/citología , Gossypium/efectos de los fármacos , Gossypium/genética , Immunoblotting , Inmunohistoquímica , Mucoproteínas/genética , Mucoproteínas/aislamiento & purificación , Floroglucinol/análogos & derivados , Floroglucinol/farmacología , Proteínas de Plantas/genética , Proteínas de Plantas/aislamiento & purificación , Raíces de Plantas/citología , Raíces de Plantas/efectos de los fármacos , Raíces de Plantas/metabolismo , Plantas Modificadas Genéticamente , Polisacáridos/metabolismo , Transporte de Proteínas/efectos de los fármacos , Interferencia de ARN , Fracciones Subcelulares/efectos de los fármacos , Fracciones Subcelulares/metabolismoRESUMEN
Arabinogalactan proteins (AGPs) are highly glycosylated members of the superfamily of hydroxyproline-rich glycoproteins (HRGPs). Despite their implication in many aspects of plant growth and development little is known about their role in tomato fruit ripening (Solanum lycopersicum) and their response to abiotic stress in tomato fruits. A search of the currently available tomato genome database resulted in the identification of 34 genes encoding putative AGPs, with at least 20 of them being expressed in fruit. We monitored the abundance of AGPs bound by JIM8 and JIM13 monoclonal antibodies as well as the gene expression profiles of the Lys-rich LeAGP1 and two classical AGPs, SlAGP2 and SlAGP4. The JIM8- and JIM13-bound AGPs showed constitutive expression during fruit ripening and under hypoxic conditions, slight up-regulation to mechanical wounding in excised tomato fruit pericarp discs and up-regulation under anoxia indicating functional roles for these proteins in the developmental program of ripening and in response to abiotic stresses. Moreover, the SlAGP2 mRNA was significantly up-regulated during fruit ripening following the climacteric ethylene production, a pattern of expression similar to that of tomato fruit PG. The SlAGP4 and LeAGP1 mRNAs were up-regulated in response to mechanical wounding while under anoxia only the SlAGP4 transcript was induced. The protein and mRNA levels of these AGPs were induced under mechanical wounding while only JIM8-bound AGPs and SIAGP4 expression were induced under anoxic conditions. Our results indicate that selected tomato AGPs seem to play a role in fruit ripening as well as in response to mechanical wounding and anoxia.
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Frutas/fisiología , Regulación de la Expresión Génica de las Plantas/genética , Mucoproteínas/genética , Solanum lycopersicum/fisiología , Estrés Fisiológico/fisiología , Secuencia de Aminoácidos , Análisis por Conglomerados , ADN Complementario/genética , Frutas/genética , Frutas/crecimiento & desarrollo , Hipoxia , Solanum lycopersicum/genética , Solanum lycopersicum/crecimiento & desarrollo , Mucoproteínas/clasificación , Mucoproteínas/aislamiento & purificación , Proteínas de Plantas/clasificación , Proteínas de Plantas/genética , Proteínas de Plantas/aislamiento & purificación , ARN de Planta/genética , Alineación de Secuencia , Transcriptoma , Heridas y LesionesRESUMEN
A novel water-soluble glycoconjugate, designated as Lycium ruthenicum glycoconjugate polysaccharide 1 (LRGP1), was isolated from the fruits of Lycium ruthenicum Murr. The crude polysaccharide was obtained by hot water extraction and purified by ion-exchange and gelfiltration chromatography. Its molecular weight was 56.2 kDa determined by HPGPC (high performance gel permeation chromatography). Monosaccharide composition analysis revealed that it was composed of rhamnose, arabinose, xylose, mannose, glucose, and galactose in a molar ratio of 0.65:10.71:0.33:0.67:1:10.41. The existence of O-type carbohydrate-peptide linkage in LRGP1 was demonstrated by ß-elimination reaction. On the basis of monosaccharide composition, partial acid hydrolysis, methylation analysis and ESI-MS analysis, LRGP1 was characterized as a branched polysaccharide rich in arabinose and galactose with a backbone composed of (1â3)-linked Gal. The branches were composed of (1â5)-linked Ara, (1â2)-linked Ara, (1â6)-linked Gal, (1â3)-linked Gal, (1â4)-linked Gal and (1â2,4)-linked Rha. Arabinose, xylose, mannose, and glucose were located at the terminal of the branches.
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Glicoconjugados/química , Lycium/química , Mucoproteínas/química , Polisacáridos/química , Secuencia de Carbohidratos , Glicoconjugados/aislamiento & purificación , Datos de Secuencia Molecular , Mucoproteínas/aislamiento & purificación , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Polisacáridos/aislamiento & purificación , Espectrometría de Masa por Ionización de ElectrosprayRESUMEN
The structure of the arabinogalactan-protein (AGP) fraction of the gum exudate of Acacia senegal (gum Arabic) isolated from hydrophobic interaction chromatography was investigated using HPSEC-MALLS, small angle neutron scattering and TEM observations. Literature reported that the AGP structure of gum Arabic adopts a very compact conformation in solution due to the attachment of short arabinoside side chains and much larger blocks of carbohydrate to the polypeptidic backbone. The present study revealed that AGP in solution had a weight average molecular weight Mw of 1.86×10(6) g mol(-1) and a radius of gyration Rg of 30 nm. In addition, two exponent values were identified in the Rg, [η], Rh and ρ vs. Mw relationships highlighting two types of conformations depending on the molecular weight range considered: a low molar mass population with long-chain branching and a compact conformation and a high molar mass population with short-chain branching and an elongated conformation. AGP would behave in solution as a branched or hyper-branched polymer with conformations ranging from globular to elongated shape depending on the size of the carbohydrate branches. Small angle scattering form factor revealed an elongated average conformation corresponding to a triaxial ellipsoid while inverse Fourier transform of the scattering form factor gave a maximum dimension for AGP of 64 nm. Transmission electron microscopy highlighted the existence of two types of flat objects with thicknesses below 3-5 nm, single particles with a more or less anisotropic spheroidal shape and aggregated structures with a more elongated shape. A remarkable feature of all particle morphologies was the presence of an outer structure combined to an inner more or less porous network of interspersed chains or interacting structural blocks, as previously found for the arabinogalactan (AG) main molecular fraction of Acacia gum. However, clear differences were observed in the density and morphology of the inner porous network, probably highlighting differences in the degree of branching. The existence of assembled AG as part of the AGP family was confirmed using TEM micrographs at high resolution. Fused AGP dimers, trimers, tetramers and multimers were also identified. These molecular assemblies questioned about the nature of interactions involved.