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1.
Curr Microbiol ; 81(8): 248, 2024 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-38951187

RESUMEN

Myxococcus xanthus synthesizes polyphosphates (polyPs) with polyphosphate kinase 1 (Ppk1) and degrades short- and long-chain polyPs with the exopolyphosphatases, Ppx1 and Ppx2, respectively. M. xanthus polyP:AMP phosphotransferase (Pap) generates ADP from AMP and polyPs. Pap expression is induced by an elevation in intracellular polyP concentration. M. xanthus synthesized polyPs during the stationary phase; the ppk1 mutant died earlier than the wild-type strain after the stationary phase. In addition, M. xanthus cells cultured in phosphate-starved medium, H2O2-supplemented medium, or amino acid-deficient medium increased the intracellular polyP levels by six- to ninefold after 6 h of incubation. However, the growth of ppk1 and ppx2 mutants in phosphate-starved medium and H2O2-supplemented medium was not significantly different from that of wild-type strain, nor was there a significant difference in fruiting body formation and sporulation in starvation condition. During development, no difference was observed in the adenylate energy charge (AEC) values in the wild-type, ppk1 mutant, and pap mutant strains until the second day of development. However, after day 3, the ppk1 and pap mutants had a lower ADP ratio and a higher AMP ratio compared to wild-type strain, and as a result, the AEC values of these mutants were lower than those of the wild-type strain. Spores of ppk1 and pap mutants in the nutrient medium germinated later than those of the wild-type strain. These results suggested that polyPs produced during development may play an important role in cellular energy homeostasis of the spores by being used to convert AMP to ADP via Pap.


Asunto(s)
Myxococcus xanthus , Polifosfatos , Esporas Bacterianas , Polifosfatos/metabolismo , Myxococcus xanthus/genética , Myxococcus xanthus/crecimiento & desarrollo , Myxococcus xanthus/metabolismo , Esporas Bacterianas/crecimiento & desarrollo , Esporas Bacterianas/genética , Esporas Bacterianas/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Fosfotransferasas (Aceptor del Grupo Fosfato)/genética , Fosfotransferasas (Aceptor del Grupo Fosfato)/metabolismo , Ácido Anhídrido Hidrolasas/genética , Ácido Anhídrido Hidrolasas/metabolismo , Medios de Cultivo/química
2.
Mol Microbiol ; 121(5): 1002-1020, 2024 05.
Artículo en Inglés | MEDLINE | ID: mdl-38525557

RESUMEN

Upon starvation, rod-shaped Myxococcus xanthus bacteria form mounds and then differentiate into round, stress-resistant spores. Little is known about the regulation of late-acting operons important for spore formation. C-signaling has been proposed to activate FruA, which binds DNA cooperatively with MrpC to stimulate transcription of developmental genes. We report that this model can explain regulation of the fadIJ operon involved in spore metabolism, but not that of the spore coat biogenesis operons exoA-I, exoL-P, and nfsA-H. Rather, a mutation in fruA increased the transcript levels from these operons early in development, suggesting negative regulation by FruA, and a mutation in mrpC affected transcript levels from each operon differently. FruA bound to all four promoter regions in vitro, but strikingly each promoter region was unique in terms of whether or not MrpC and/or the DNA-binding domain of Nla6 bound, and in terms of cooperative binding. Furthermore, the DevI component of a CRISPR-Cas system is a negative regulator of all four operons, based on transcript measurements. Our results demonstrate complex regulation of sporulation genes by three transcription factors and a CRISPR-Cas component, which we propose produces spores suited to withstand starvation and environmental insults.


Asunto(s)
Proteínas Bacterianas , Sistemas CRISPR-Cas , Regulación Bacteriana de la Expresión Génica , Myxococcus xanthus , Operón , Regiones Promotoras Genéticas , Esporas Bacterianas , Factores de Transcripción , Myxococcus xanthus/genética , Myxococcus xanthus/metabolismo , Myxococcus xanthus/crecimiento & desarrollo , Proteínas Bacterianas/metabolismo , Proteínas Bacterianas/genética , Operón/genética , Factores de Transcripción/metabolismo , Factores de Transcripción/genética , Esporas Bacterianas/genética , Esporas Bacterianas/metabolismo , Esporas Bacterianas/crecimiento & desarrollo , Regiones Promotoras Genéticas/genética , Mutación , Proteínas de Unión al ADN/metabolismo , Proteínas de Unión al ADN/genética
3.
Anal Bioanal Chem ; 414(4): 1691-1698, 2022 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-34850244

RESUMEN

Myxococcus xanthus is a common soil bacterium with a complex life cycle, which is known for production of secondary metabolites. However, little is known about the effects of nutrient availability on M. xanthus metabolite production. In this study, we utilize confocal Raman microscopy (CRM) to examine the spatiotemporal distribution of chemical signatures secreted by M. xanthus and their response to varied nutrient availability. Ten distinct spectral features are observed by CRM from M. xanthus grown on nutrient-rich medium. However, when M. xanthus is constrained to grow under nutrient-limited conditions, by starving it of casitone, it develops fruiting bodies, and the accompanying Raman microspectra are dramatically altered. The reduced metabolic state engendered by the absence of casitone in the medium is associated with reduced, or completely eliminated, features at 1140 cm-1, 1560 cm-1, and 1648 cm-1. In their place, a feature at 1537 cm-1 is observed, this feature being tentatively assigned to a transitional phase important for cellular adaptation to varying environmental conditions. In addition, correlating principal component analysis heat maps with optical images illustrates how fruiting bodies in the center co-exist with motile cells at the colony edge. While the metabolites responsible for these Raman features are not completely identified, three M. xanthus peaks at 1004, 1151, and 1510 cm-1 are consistent with the production of lycopene. Thus, a combination of CRM imaging and PCA enables the spatial mapping of spectral signatures of secreted factors from M. xanthus and their correlation with metabolic conditions.


Asunto(s)
Myxococcus xanthus/metabolismo , Técnicas de Cultivo de Célula , Medios de Cultivo/química , Medios de Cultivo/metabolismo , Metaboloma , Myxococcus xanthus/química , Myxococcus xanthus/crecimiento & desarrollo , Espectrometría Raman
4.
Mol Microbiol ; 116(4): 1151-1172, 2021 10.
Artículo en Inglés | MEDLINE | ID: mdl-34455651

RESUMEN

Exopolysaccharide (EPS) layers on the bacterial cell surface are key determinants of biofilm establishment and maintenance, leading to the formation of higher-order 3D structures that confer numerous survival benefits to a cell community. In addition to a specific cell-associated EPS glycocalyx, we recently revealed that the social δ-proteobacterium Myxococcus xanthus secretes a novel biosurfactant polysaccharide (BPS) to the extracellular milieu. Together, secretion of the two polymers (EPS and BPS) is required for type IV pilus (T4P)-dependent swarm expansion via spatio-specific biofilm expression profiles. Thus the synergy between EPS and BPS secretion somehow modulates the multicellular lifecycle of M. xanthus. Herein, we demonstrate that BPS secretion functionally alters the EPS glycocalyx via destabilization of the latter, fundamentally changing the characteristics of the cell surface. This impacts motility behaviors at the single-cell level and the aggregative capacity of cells in groups via cell-surface EPS fibril formation as well as T4P production, stability, and positioning. These changes modulate the structure of swarm biofilms via cell layering, likely contributing to the formation of internal swarm polysaccharide architecture. Together, these data reveal the manner by which the combined secretion of two distinct polymers induces single-cell changes that modulate swarm biofilm communities.


Asunto(s)
Biopelículas , Fimbrias Bacterianas/metabolismo , Glicocálix/metabolismo , Myxococcus xanthus/metabolismo , Polisacáridos Bacterianos/metabolismo , Proteínas Bacterianas/metabolismo , Membrana Celular/metabolismo , Myxococcus xanthus/crecimiento & desarrollo
5.
Appl Environ Microbiol ; 87(18): e0091921, 2021 08 26.
Artículo en Inglés | MEDLINE | ID: mdl-34190612

RESUMEN

Bacteria have two pathways to restart stalled replication forks caused by environmental stresses, error-prone translesion DNA synthesis (TLS) catalyzed by TLS polymerase and error-free template switching catalyzed by RecA, and their competition on the arrested fork affects bacterial SOS mutagenesis. DnaE2 is an error-prone TLS polymerase, and its functions require ImuA and ImuB. Here, we investigated the transcription of imuA, imuB, and dnaE2 in UV-C-irradiated Myxococcus xanthus and found that the induction of imuA occurred significantly earlier than that of the other two genes. Mutant analysis showed that unlike that of imuB or dnaE2, the deletion of imuA significantly delayed bacterial regrowth and slightly reduced the bacterial mutation frequency and UV resistance. Transcriptomic analysis revealed that the absence of ImuA released the expression of some known SOS genes, including recA1, recA2, imuB, and dnaE2. Yeast two-hybrid and pulldown analyses proved that ImuA interacts physically with RecA1 besides ImuB. Protein activity analysis indicated that ImuA had no DNA-binding activity but inhibited the DNA-binding and recombinase activity of RecA1. These findings indicate the new role of ImuA in SOS mutagenesis; that is, ImuA inhibits the recombinase activity of RecA1, thereby facilitating SOS mutagenesis in M. xanthus. IMPORTANCE DnaE2 is responsible for bacterial SOS mutagenesis in nearly one-third of sequenced bacterial strains. However, its mechanism, especially the function of one of its accessory proteins, ImuA, is still unclear. Here, we report that M. xanthus ImuA could affect SOS mutagenesis by inhibiting the recombinase activity of RecA1, which helps to explain the mechanism of DnaE2-dependent TLS and the selection of the two restart pathways to repair the stalled replication fork.


Asunto(s)
Proteínas Bacterianas/genética , Myxococcus xanthus/genética , Rec A Recombinasas/genética , Respuesta SOS en Genética , ADN/metabolismo , Mutagénesis , Myxococcus xanthus/crecimiento & desarrollo , Técnicas del Sistema de Dos Híbridos
6.
J Microbiol Biotechnol ; 31(7): 912-920, 2021 Jul 28.
Artículo en Inglés | MEDLINE | ID: mdl-34024894

RESUMEN

SOS response is a conserved response to DNA damage in prokaryotes and is negatively regulated by LexA protein, which recognizes specifically an "SOS-box" motif present in the promoter region of SOS genes. Myxococcus xanthus DK1622 possesses a lexA gene, and while the deletion of lexA had no significant effect on either bacterial morphology, UV-C resistance, or sporulation, it did delay growth. UV-C radiation resulted in 651 upregulated genes in M. xanthus, including the typical SOS genes lexA, recA, uvrA, recN and so on, mostly enriched in the pathways of DNA replication and repair, secondary metabolism, and signal transduction. The UV-irradiated lexA mutant also showed the induced expression of SOS genes and these SOS genes enriched into a similar pathway profile to that of wild-type strain. Without irradiation treatment, the absence of LexA enhanced the expression of 122 genes that were not enriched in any pathway. Further analysis of the promoter sequence revealed that in the 122 genes, only the promoters of recA2, lexA and an operon composed of three genes (pafB, pafC and cyaA) had SOS box sequence to which the LexA protein is bound directly. These results update our current understanding of SOS response in M. xanthus and show that UV induces more genes involved in secondary metabolism and signal transduction in addition to DNA replication and repair; and while the canonical LexA-dependent regulation on SOS response has shrunk, only 5 SOS genes are directly repressed by LexA.


Asunto(s)
Proteínas Bacterianas/metabolismo , Myxococcus xanthus/efectos de la radiación , Respuesta SOS en Genética/efectos de la radiación , Serina Endopeptidasas/metabolismo , Proteínas Bacterianas/genética , Regulación Bacteriana de la Expresión Génica/efectos de la radiación , Genes Bacterianos/genética , Genes Bacterianos/efectos de la radiación , Mutación , Myxococcus xanthus/genética , Myxococcus xanthus/crecimiento & desarrollo , Regiones Promotoras Genéticas , Serina Endopeptidasas/genética , Transcriptoma/efectos de la radiación , Rayos Ultravioleta
7.
J Exp Zool B Mol Dev Evol ; 336(3): 300-314, 2021 04.
Artículo en Inglés | MEDLINE | ID: mdl-32419346

RESUMEN

Development and evolution are dynamical processes under the continuous control of organismic and environmental factors. Generic physical processes, associated with biological materials and certain genes or molecules, provide a morphological template for the evolution and development of organism forms. Generic dynamical behaviors, associated with recurring network motifs, provide a temporal template for the regulation and coordination of biological processes. The role of generic physical processes and their associated molecules in development is the topic of the dynamical patterning module (DPM) framework. The role of generic dynamical behaviors in biological regulation is studied via the identification of the associated network motifs (NMs). We propose a joint DPM-NM perspective on the emergence and regulation of multicellularity focusing on a multicellular aggregative bacterium, Myxococcus xanthus. Understanding M. xanthus development as a dynamical process embedded in a physical substrate provides novel insights into the interaction between developmental regulatory networks and generic physical processes in the evolutionary transition to multicellularity.


Asunto(s)
Evolución Biológica , Myxococcus xanthus/crecimiento & desarrollo , Tipificación del Cuerpo , Morfogénesis
8.
Nat Commun ; 11(1): 5563, 2020 11 04.
Artículo en Inglés | MEDLINE | ID: mdl-33149152

RESUMEN

Starvation induces cell aggregation in the soil bacterium Myxococcus xanthus, followed by formation of fruiting bodies packed with myxospores. Sporulation in the absence of fruiting bodies can be artificially induced by high concentrations of glycerol through unclear mechanisms. Here, we show that a compound (ambruticin VS-3) produced by a different myxobacterium, Sorangium cellulosum, affects the development of M. xanthus in a similar manner. Both glycerol (at millimolar levels) and ambruticin VS-3 (at nanomolar concentrations) inhibit M. xanthus fruiting body formation under starvation, and induce sporulation in the presence of nutrients. The response is mediated in M. xanthus by three hybrid histidine kinases (AskA, AskB, AskC) that form complexes interacting with two major developmental regulators (MrpC, FruA). In addition, AskB binds directly to the mrpC promoter in vitro. Thus, our work indicates that the AskABC-dependent regulatory pathway mediates the responses to ambruticin VS-3 and glycerol. We hypothesize that production of ambruticin VS-3 may allow S. sorangium to outcompete M. xanthus under both starvation and growth conditions in soil.


Asunto(s)
Glicerol/farmacología , Myxococcales/metabolismo , Myxococcus xanthus/efectos de los fármacos , Myxococcus xanthus/crecimiento & desarrollo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Regulación Bacteriana de la Expresión Génica/genética , Histidina Quinasa/genética , Histidina Quinasa/metabolismo , Espectrometría de Masas , Myxococcus xanthus/metabolismo , Myxococcus xanthus/fisiología , Regiones Promotoras Genéticas , Unión Proteica , Transducción de Señal/fisiología , Sorangium/química , Sorangium/metabolismo , Esporas Bacterianas , Estrés Fisiológico , Resonancia por Plasmón de Superficie , Factores de Transcripción/genética , Factores de Transcripción/metabolismo
9.
Proc Natl Acad Sci U S A ; 117(25): 14444-14452, 2020 06 23.
Artículo en Inglés | MEDLINE | ID: mdl-32513721

RESUMEN

Chemical-induced spores of the Gram-negative bacterium Myxococcus xanthus are peptidoglycan (PG)-deficient. It is unclear how these spherical spores germinate into rod-shaped, walled cells without preexisting PG templates. We found that germinating spores first synthesize PG randomly on spherical surfaces. MglB, a GTPase-activating protein, forms a cluster that responds to the status of PG growth and stabilizes at one future cell pole. Following MglB, the Ras family GTPase MglA localizes to the second pole. MglA directs molecular motors to transport the bacterial actin homolog MreB and the Rod PG synthesis complexes away from poles. The Rod system establishes rod shape de novo by elongating PG at nonpolar regions. Thus, similar to eukaryotic cells, the interactions between GTPase, cytoskeletons, and molecular motors initiate spontaneous polarization in bacteria.


Asunto(s)
Proteínas Bacterianas/metabolismo , Proteínas Activadoras de GTPasa/metabolismo , Myxococcus xanthus/citología , Peptidoglicano/metabolismo , Esporas Bacterianas/crecimiento & desarrollo , Polaridad Celular , Pared Celular/metabolismo , Pared Celular/ultraestructura , Microscopía Electrónica , Morfogénesis , Myxococcus xanthus/crecimiento & desarrollo , Myxococcus xanthus/metabolismo , Myxococcus xanthus/ultraestructura , Peptidoglicano/genética , Esporas Bacterianas/metabolismo , Esporas Bacterianas/ultraestructura
10.
J Exp Zool B Mol Dev Evol ; 334(1): 14-24, 2020 01.
Artículo en Inglés | MEDLINE | ID: mdl-31829529

RESUMEN

How specific environmental contexts contribute to the robustness and variation of developmental trajectories and evolutionary transitions is a central point in Ecological Evolutionary Developmental Biology ("Eco-Evo-Devo"). However, the articulation of ecological, evolutionary and developmental processes into integrative frameworks has been elusive, partly because standard experimental designs neglect or oversimplify ecologically meaningful contexts. Microbial models are useful to expose and discuss two possible sources of bias associated with conventional gene-centered experimental designs: the use of laboratory strains and standard laboratory environmental conditions. We illustrate our point by showing how contrasting developmental phenotypes in Myxococcus xanthus depend on the joint variation of temperature and substrate stiffness. Microorganismal development can provide key information for better understanding the role of environmental conditions in the evolution of developmental variation, and to overcome some of the limitations associated with current experimental approaches.


Asunto(s)
Evolución Biológica , Ecosistema , Modelos Biológicos , Myxococcus xanthus/crecimiento & desarrollo , Myxococcus xanthus/genética , Sesgo , Proyectos de Investigación
11.
Mol Microbiol ; 112(5): 1531-1551, 2019 11.
Artículo en Inglés | MEDLINE | ID: mdl-31449700

RESUMEN

The Crp/Fnr family of transcriptional regulators play central roles in transcriptional control of diverse physiological responses, and are activated by a surprising diversity of mechanisms. MrpC is a Crp/Fnr homolog that controls the Myxococcus xanthus developmental program. A long-standing model proposed that MrpC activity is controlled by the Pkn8/Pkn14 serine/threonine kinase cascade, which phosphorylates MrpC on threonine residue(s) located in its extreme amino-terminus. In this study, we demonstrate that a stretch of consecutive threonine and serine residues, T21 T22 S23 S24, is necessary for MrpC activity by promoting efficient DNA binding. Mass spectrometry analysis indicated the TTSS motif is not directly phosphorylated by Pkn14 in vitro but is necessary for efficient Pkn14-dependent phosphorylation on several residues in the remainder of the protein. In an important correction to a long-standing model, we show Pkn8 and Pkn14 kinase activities do not play obvious roles in controlling MrpC activity in wild-type M. xanthus under laboratory conditions. Instead, we propose Pkn14 modulates MrpC DNA binding in response to unknown environmental conditions. Interestingly, substitutions in the TTSS motif caused developmental defects that varied between biological replicates, revealing that MrpC plays a role in promoting a robust developmental phenotype.


Asunto(s)
Proteínas Bacterianas/genética , Regulación Bacteriana de la Expresión Génica/genética , Myxococcus xanthus/crecimiento & desarrollo , Myxococcus xanthus/genética , Factores de Transcripción/genética , Secuencia de Aminoácidos/genética , Proteínas Bacterianas/metabolismo , Proteínas de Unión al ADN/genética , Escherichia coli/metabolismo , Fosforilación , Proteínas Serina-Treonina Quinasas/metabolismo , Serina/genética , Transducción de Señal/genética , Treonina/genética , Transcripción Genética/genética
12.
Cells ; 8(6)2019 06 03.
Artículo en Inglés | MEDLINE | ID: mdl-31163575

RESUMEN

Two unrecognizable strains of the same bacterial species form a distinct colony boundary. During growth as colonies, Myxococcus xanthus uses multiple factors to establish cooperation between recognized strains and prevent interactions with unrecognized strains of the same species. Here, ΔMXAN_0049 is a mutant strain deficient in immunity for the paired nuclease gene, MXAN_0050, that has a function in the colony-merger incompatibility of Myxococcus xanthus DK1622. With the aim to investigate the factors involved in boundary formation, a proteome and metabolome study was employed. Visualization of the boundary between DK1622 and ΔMXAN_0049 was done scanning electron microscope (SEM), which displayed the presence of many damaged cells in the boundary. Proteome analysis of the DK1622- boundary disclosed many possible proteins, such as cold shock proteins, cell shape-determining protein MreC, along with a few pathways, such as RNA degradation, phenylalanine, tyrosine and tryptophan biosynthesis, and Type VI secretion system (T6SS), which may play major roles in the boundary formation. Metabolomics studies revealed various secondary metabolites that were significantly produced during boundary formation. Overall, the results concluded that multiple factors participated in the boundary formation in M. xanthus, leading to cellular damage that is helpful in solving the mystery of the boundary formation mechanism.


Asunto(s)
Metabolómica/métodos , Myxococcus xanthus/crecimiento & desarrollo , Myxococcus xanthus/metabolismo , Proteómica/métodos , Sistemas de Secreción Bacterianos , Recuento de Colonia Microbiana , Regulación hacia Abajo , Viabilidad Microbiana , Myxococcus xanthus/ultraestructura , Mapas de Interacción de Proteínas , Proteoma/metabolismo , Metabolismo Secundario , Regulación hacia Arriba
13.
J Microbiol ; 57(9): 795-802, 2019 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-31187417

RESUMEN

Myxococcus xanthus, a myxobacterium, displays phase variation between yellow phase and tan phase. We found that deletion of the encA gene encoding encapsulin and the encF gene encoding a metalloprotease causes formation of tan colonies that never transform into yellow colonies. The encA and encF mutants were defective in the production of DK-xanthene and myxovirescin. They did not produce extracellular polysaccharides; hence, the cells did not aggregate in liquid and showed reduced swarming on agar plates. The mutants had defective sporulation, but were rescued extracellularly by wild type cells. All these traits indicate that the encA and encF mutants are likely to be tan-phase-locked, and encapsulin has a close relationship with phase variation in M. xanthus. The encA and encF genes are localized in the same gene cluster, encBAEFG (MXAN_3557~MXAN_3553). Unlike the encA and encF genes, deletion of other genes in the cluster did not show tan-phase-locked phenotype.


Asunto(s)
Proteínas Bacterianas/metabolismo , Myxococcus xanthus/crecimiento & desarrollo , Myxococcus xanthus/genética , Proteínas Bacterianas/genética , Color , Eliminación de Gen , Macrólidos/metabolismo , Metaloproteasas/genética , Metaloproteasas/metabolismo , Mutación , Myxococcus xanthus/metabolismo , Fenotipo , Polisacáridos Bacterianos/biosíntesis , Xantenos/metabolismo
14.
Evol Dev ; 21(2): 82-95, 2019 03.
Artículo en Inglés | MEDLINE | ID: mdl-30762281

RESUMEN

Small non-coding RNAs (sRNAs) control bacterial gene expression involved in a wide range of important cellular processes. In the highly social bacterium Myxococcus xanthus, the sRNA Pxr prevents multicellular fruiting-body development when nutrients are abundant. Pxr was discovered from the evolution of a developmentally defective strain (OC) into a developmentally proficient strain (PX). In OC, Pxr is constitutively expressed and blocks development even during starvation. In PX, one mutation deactivates Pxr allowing development to proceed. We screened for transposon mutants that suppress the OC defect and thus potentially reveal new Pxr-pathway components. Insertions significantly restoring development were found in four genes-rnd, rnhA, stkA and Mxan_5793-not previously associated with an sRNA activity. Phylogenetic analysis suggests that the Pxr pathway was constructed within the Cystobacterineae suborder both by co-option of genes predating the Myxococcales order and incorporation of a novel gene (Mxan_5793). Further, the sequence similarity of rnd, rnhA and stkA homologs relative to M. xanthus alleles was found to decrease greatly among species beyond the Cystobacterineae suborder compared to the housekeeping genes examined. Finally, ecological context differentially affected the developmental phenotypes of distinct mutants, with implications for the evolution of development in variable environments.


Asunto(s)
Evolución Molecular , Myxococcus xanthus/genética , ARN Pequeño no Traducido/genética , Genoma Bacteriano , Mutagénesis Insercional , Myxococcus xanthus/crecimiento & desarrollo , Fenotipo , Filogenia
15.
J Bacteriol ; 201(6)2019 03 15.
Artículo en Inglés | MEDLINE | ID: mdl-30617244

RESUMEN

His-Asp phosphorelay (also known as two-component signal transduction) proteins are the predominant mechanism used in most bacteria to control behavior in response to changing environmental conditions. In addition to systems consisting of a simple two-component system utilizing an isolated histidine kinase/response regulator pair, some bacteria are enriched in histidine kinases that serve as signal integration proteins; these kinases are usually characterized by noncanonical domain architecture, and the responses that they regulate may be difficult to identify. The environmental bacterium Myxococcus xanthus is highly enriched in these noncanonical histidine kinases. M. xanthus is renowned for a starvation-induced multicellular developmental program in which some cells are induced to aggregate into fruiting bodies and then differentiate into environmentally resistant spores. Here, we characterize the M. xanthus orphan hybrid histidine kinase SinK (Mxan_4465), which consists of a histidine kinase transmitter followed by two receiver domains (REC1 and REC2). Nonphosphorylatable sinK mutants were analyzed under two distinct developmental conditions and using a new high-resolution developmental assay. These assays revealed that SinK autophosphorylation and REC1 impact the onset of aggregation and/or the mobility of aggregates, while REC2 impacts sporulation efficiency. SinK activity is controlled by a genus-specific hypothetical protein (SinM; Mxan_4466). We propose that SinK serves to fine-tune fruiting body morphology in response to environmental conditions.IMPORTANCE Biofilms are multicellular communities of microorganisms that play important roles in host disease or environmental biofouling. Design of preventative strategies to block biofilms depends on understanding the molecular mechanisms used by microorganisms to build them. The production of biofilms in bacteria often involves two-component signal transduction systems in which one protein component (a kinase) detects an environmental signal and, through phosphotransfer, activates a second protein component (a response regulator) to change the transcription of genes necessary to produce a biofilm. We show that an atypical kinase, SinK, modulates several distinct stages of specialized biofilm produced by the environmental bacterium Myxococcus xanthus SinK likely integrates multiple signals to fine-tune biofilm formation in response to distinct environmental conditions.


Asunto(s)
Adhesión Bacteriana , Histidina Quinasa/metabolismo , Interacciones Microbianas , Myxococcus xanthus/crecimiento & desarrollo , Transducción de Señal , Esporas Bacterianas/crecimiento & desarrollo , Análisis Mutacional de ADN , Regulación de la Expresión Génica , Histidina Quinasa/genética , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Myxococcus xanthus/metabolismo , Fosforilación , Dominios Proteicos , Procesamiento Proteico-Postraduccional
16.
J Bacteriol ; 200(22)2018 11 15.
Artículo en Inglés | MEDLINE | ID: mdl-30181127

RESUMEN

Upon depletion of nutrients, Myxococcus xanthus forms mounds on a solid surface. The differentiation of rod-shaped cells into stress-resistant spores within mounds creates mature fruiting bodies. The developmental process can be perturbed by the addition of nutrient medium before the critical period of commitment to spore formation. The response was investigated by adding a 2-fold dilution series of nutrient medium to starving cells. An ultrasensitive response was observed, as indicated by a steep increase in the spore number after the addition of 12.5% versus 25% nutrient medium. The level of MrpC, which is a key transcription factor in the gene regulatory network, correlated with the spore number after nutrient medium addition. The MrpC level decreased markedly by 3 h after adding nutrient medium but recovered more after the addition of 12.5% than after 25% nutrient medium addition. The difference in MrpC levels was greatest midway during the period of commitment to sporulation, and mound formation was restored after 12.5% nutrient medium addition but not after adding 25% nutrient medium. Although the number of spores formed after 12.5% nutrient medium addition was almost normal, the transcript levels of "late" genes in the regulatory network failed to rise normally during the commitment period. However, at later times, expression from a reporter gene fused to a late promoter was higher after adding 12.5% than after adding 25% nutrient medium, consistent with the spore numbers. The results suggest that a threshold level of MrpC must be achieved in order for mounds to persist and for cells within to differentiate into spores.IMPORTANCE Many signaling and gene regulatory networks convert graded stimuli into all-or-none switch-like responses. Such ultrasensitivity can produce bistability in cell populations, leading to different cell fates and enhancing survival. We discovered an ultrasensitive response of M. xanthus to nutrient medium addition during development. A small change in nutrient medium concentration caused a profound change in the developmental process. The level of the transcription factor MrpC correlated with multicellular mound formation and differentiation into spores. A threshold level of MrpC is proposed to be necessary to initiate mound formation and create a positive feedback loop that may explain the ultrasensitive response. Understanding how this biological switch operates will provide a paradigm for the broadly important topic of cellular behavior in microbial communities.


Asunto(s)
Proteínas Bacterianas/metabolismo , Myxococcus xanthus/crecimiento & desarrollo , Myxococcus xanthus/genética , Nutrientes/metabolismo , Factores de Transcripción/metabolismo , Proteínas Bacterianas/genética , Medios de Cultivo , Regulación Bacteriana de la Expresión Génica , Transducción de Señal , Esporas/crecimiento & desarrollo , Esporas Bacterianas , Factores de Transcripción/genética
17.
Dev Growth Differ ; 60(2): 121-129, 2018 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-29441522

RESUMEN

Myxococcus xanthus is a myxobacterium that exhibits aggregation and cellular differentiation during the formation of fruiting bodies. Therefore, it has become a valuable model system to study the transition to multicellularity via cell aggregation. Although there is a vast set of experimental information for the development on M. xanthus, the dynamics behind cell-fate determination in this organism's development remain unclear. We integrate the currently available evidence in a mathematical network model that allows to test the set of molecular elements and regulatory interactions that are sufficient to account for the specification of the cell types that are observed in fruiting body formation. Besides providing a dynamic mechanism for cell-fate determination in the transition to multicellular aggregates of M. xanthus, this model enables the postulation of specific mechanisms behind some experimental observations for which no explanations have been provided, as well as new regulatory interactions that can be experimentally tested. Finally, this model constitutes a formal basis on which the continuously emerging data for this system can be integrated and interpreted.


Asunto(s)
Modelos Biológicos , Myxococcus xanthus/citología , Myxococcus xanthus/crecimiento & desarrollo , Movimiento
18.
Microb Genom ; 4(2)2018 02.
Artículo en Inglés | MEDLINE | ID: mdl-29345219

RESUMEN

Predation is a fundamental ecological process, but within most microbial ecosystems the molecular mechanisms of predation remain poorly understood. We investigated transcriptome changes associated with the predation of Escherichia coli by the myxobacterium Myxococcus xanthus using mRNA sequencing. Exposure to pre-killed prey significantly altered expression of 1319 predator genes. However, the transcriptional response to living prey was minimal, with only 12 genes being significantly up-regulated. The genes most induced by prey presence (kdpA and kdpB, members of the kdp regulon) were confirmed by reverse transcriptase quantitative PCR to be regulated by osmotic shock in M. xanthus, suggesting indirect sensing of prey. However, the prey showed extensive transcriptome changes when co-cultured with predator, with 40 % of its genes (1534) showing significant changes in expression. Bacteriolytic M. xanthus culture supernatant and secreted outer membrane vesicles (OMVs) also induced changes in expression of large numbers of prey genes (598 and 461, respectively). Five metabolic pathways were significantly enriched in prey genes up-regulated on exposure to OMVs, supernatant and/or predatory cells, including those for ribosome and lipopolysaccharide production, suggesting that the prey cell wall and protein production are primary targets of the predator's attack. Our data suggest a model of the myxobacterial predatome (genes and proteins associated with predation) in which the predator constitutively produces secretions which disable its prey whilst simultaneously generating a signal that prey is present. That signal then triggers a regulated feeding response in the predator.


Asunto(s)
Escherichia coli/genética , Myxococcales/genética , Myxococcus xanthus/genética , Conducta Predatoria , Transcriptoma , Adenosina Trifosfatasas/genética , Animales , Antiinfecciosos/farmacología , Proteínas Bacterianas/genética , Bacteriólisis , Proteínas de Transporte de Catión/genética , Técnicas de Cocultivo , Escherichia coli/crecimiento & desarrollo , Proteínas de Escherichia coli/genética , Regulación Bacteriana de la Expresión Génica , Myxococcales/crecimiento & desarrollo , Myxococcus xanthus/crecimiento & desarrollo , Presión Osmótica , ARN Mensajero , Regulón
19.
Nat Commun ; 8(1): 1817, 2017 11 28.
Artículo en Inglés | MEDLINE | ID: mdl-29180656

RESUMEN

In bacteria, homologs of actin, tubulin, and intermediate filament proteins often act in concert with bacteria-specific scaffolding proteins to ensure the proper arrangement of cellular components. Among the bacteria-specific factors are the bactofilins, a widespread family of polymer-forming proteins whose biology is poorly investigated. Here, we study the three bactofilins BacNOP in the rod-shaped bacterium Myxococcus xanthus. We show that BacNOP co-assemble into elongated scaffolds that restrain the ParABS chromosome segregation machinery to the subpolar regions of the cell. The centromere (parS)-binding protein ParB associates with the pole-distal ends of these structures, whereas the DNA partitioning ATPase ParA binds along their entire length, using the newly identified protein PadC (MXAN_4634) as an adapter. The integrity of these complexes is critical for proper nucleoid morphology and chromosome segregation. BacNOP thus mediate a previously unknown mechanism of subcellular organization that recruits proteins to defined sites within the cytoplasm, far off the cell poles.


Asunto(s)
Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Segregación Cromosómica/fisiología , Myxococcus xanthus/genética , Myxococcus xanthus/metabolismo , Adenosina Trifosfatasas/metabolismo , Proteínas Bacterianas/química , Proteínas Bacterianas/fisiología , División Celular , Fenómenos Fisiológicos Celulares , Centrómero/metabolismo , Segregación Cromosómica/genética , Cromosomas Bacterianos/genética , Cromosomas Bacterianos/metabolismo , Myxococcus xanthus/citología , Myxococcus xanthus/crecimiento & desarrollo , Unión Proteica , Dominios y Motivos de Interacción de Proteínas , Análisis de Secuencia de ADN
20.
Sheng Wu Gong Cheng Xue Bao ; 33(9): 1582-1595, 2017 Sep 25.
Artículo en Chino | MEDLINE | ID: mdl-28956403

RESUMEN

Myxococcus xanthus is a Gram-negative soil bacterium capable of performing sophisticated cellular behaviors and growing one of the most intricate bacterial single-species biofilms in nature. During the process of biofilm formation, social behaviors of M. xanthus cells dominate key steps of the biofilm establishment, e.g., cellular motility on solid surface, predatory behavior by the grouped cells, kin recognition in the community, fruiting body development, myxospore differentiation, and programmed cell death. This review introduces the recent research progress about the M. xanthus biofilms.


Asunto(s)
Biopelículas/crecimiento & desarrollo , Interacciones Microbianas , Myxococcus xanthus/crecimiento & desarrollo
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