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1.
J Vis Exp ; (206)2024 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-38738876

RESUMEN

Functional characterization of proteins requires them to be expressed and purified in substantial amounts with high purity to perform biochemical assays. The Fast Protein Liquid Chromatography (FPLC) system allows high-resolution separation of complex protein mixtures. By adjusting various parameters in FPLC, such as selecting the appropriate purification matrix, regulating the protein sample's temperature, and managing the sample's flow rate onto the matrix and the elution rate, it is possible to ensure the protein's stability and functionality. In this protocol, we will demonstrate the versatility of the FPLC system to purify 6X-His-tagged flap endonuclease 1 (FEN1) protein, produced in bacterial cultures. To improve protein purification efficiency, we will focus on multiple considerations, including proper column packing and preparation, sample injection using a sample loop, flow rate of sample application to the column, and sample elution parameters. Finally, the chromatogram will be analyzed to identify fractions containing high yields of protein and considerations for proper recombinant protein long-term storage. Optimizing protein purification methods is crucial for improving the precision and reliability of protein analysis.


Asunto(s)
Cromatografía de Afinidad , Cromatografía de Afinidad/métodos , Endonucleasas de ADN Solapado/química , Endonucleasas de ADN Solapado/aislamiento & purificación , Endonucleasas de ADN Solapado/metabolismo , Cromatografía Liquida/métodos , Histidina/química , Escherichia coli/genética , Escherichia coli/química , Escherichia coli/metabolismo , Oligopéptidos/química , Oligopéptidos/aislamiento & purificación , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/aislamiento & purificación , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo
2.
J Chromatogr A ; 1722: 464857, 2024 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-38569445

RESUMEN

Epimer separation is crucial in the field of analytical chemistry, separation science, and the pharmaceutical industry. No reported methods could separate simultaneously epimers or even isomers and remove other unwanted, co-existing, interfering substances from complex systems like herbal extracts. Herein, we prepared a heptapeptide-modified stationary phase for the separation of 1R,2S-(-)-ephedrine [(-)-Ephe] and 1S,2S-(+)-pseudoephedrine [(+)-Pse] epimers from Ephedra sinica Stapf extract and blood samples. The heptapeptide stationary phase was comprehensively characterized by scanning electron microscopy, X-ray photoelectron spectroscopy, and Fourier transform infrared spectroscopy. The separation efficiency of the heptapeptide column was compared with an affinity column packed with full-length ß2-AR functionalized silica gel (ß2-AR column). The binding affinity of the heptapeptide with (+)-Pse was 3-fold greater than that with (-)-Ephe. Their binding mechanisms were extensively characterized by chromatographic analysis, ultraviolet spectra, circular dichroism analysis, isothermal titration calorimetry, and molecule docking. An enhanced hydrogen bonding was clearly observed in the heptapeptide-(+)-Pse complex. Such results demonstrated that the heptapeptide can recognize (+)-Pse and (-)-Ephe epimers in a complex system. This work, we believe, was the first report to simultaneously separate epimers and remove non-specific interfering substances from complex samples. The method was potentially applicable to more challenging sample separation, such as chiral separation from complex systems.


Asunto(s)
Efedrina , Seudoefedrina , Receptores Adrenérgicos beta 2 , Efedrina/química , Seudoefedrina/química , Receptores Adrenérgicos beta 2/química , Receptores Adrenérgicos beta 2/metabolismo , Simulación del Acoplamiento Molecular , Ephedra sinica/química , Cromatografía Líquida de Alta Presión/métodos , Extractos Vegetales/química , Humanos , Estereoisomerismo , Oligopéptidos/química , Oligopéptidos/aislamiento & purificación
3.
J Nat Prod ; 87(4): 1197-1202, 2024 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-38503712

RESUMEN

HPLC-MS analysis revealed the presence of an unreported peptide in the extract of the marine sponge Neopetrosia sp. Its structure was determined as a tripeptide, named neopetromin (1), composed of two tyrosine and one tryptophan residues with a heteroaromatic C-N cross-link between side chains. The absolute configuration of amino acids was determined using Marfey's method after ozonolysis and hydrolysis of 1. Compound 1 promoted vacuole fragmentation in an actin-independent manner in tobacco BY-2 cells.


Asunto(s)
Nicotiana , Poríferos , Vacuolas , Animales , Estructura Molecular , Poríferos/química , Nicotiana/química , Vacuolas/efectos de los fármacos , Péptidos Cíclicos/química , Péptidos Cíclicos/farmacología , Biología Marina , Oligopéptidos/química , Oligopéptidos/farmacología , Oligopéptidos/aislamiento & purificación , Cromatografía Líquida de Alta Presión , Triptófano/química , Triptófano/farmacología
4.
Mar Drugs ; 20(12)2022 Nov 28.
Artículo en Inglés | MEDLINE | ID: mdl-36547896

RESUMEN

This study aimed to purify and identify antiphotoaging peptides from oyster (Crassostrea hongkongensis) protein enzymatic hydrolysates (OPEH) and to investigate the possible mechanism underlying its antiphotoaging effect. Multiple methods (Ultrafiltration, G25 Chromatography, RP-HPLC, and LC/MS/MS) had been used for this purpose, and eventually, two peptides, including WNLNP and RKNEVLGK, were identified. Particularly, WNLNP exerted remarkable antiphotoaging effect on the UVB-irradiated HaCaT photoaged cell model in a dose-dependent manner. WNLNP exerted its protective effect mainly through inhibiting ROS production, decreasing MMP-1 expression, but increasing extracellular pro-collagen I content. Furthermore, WNLNP downregulated p38, JNK, ERK, and p65 phosphorylation in the MAPK/NF-κB signaling pathway and attenuated bax over-expressions but reversed bcl-2 reduction in UVB- irradiated HaCaT cells. The molecular docking analysis showed that WNLNP forms five and seven hydrogen bonds with NF-κB (p65) and MMP-1, respectively. This study suggested that a pentapeptide WNLNP isolated from OPEH had great potential to prevent and regulate skin photoaging.


Asunto(s)
Crassostrea , Oligopéptidos , Envejecimiento de la Piel , Animales , Humanos , Crassostrea/química , Células HaCaT , Metaloproteinasa 1 de la Matriz/metabolismo , Simulación del Acoplamiento Molecular , FN-kappa B/metabolismo , Envejecimiento de la Piel/efectos de los fármacos , Espectrometría de Masas en Tándem , Rayos Ultravioleta/efectos adversos , Oligopéptidos/química , Oligopéptidos/aislamiento & purificación , Oligopéptidos/farmacología
5.
J Nat Prod ; 85(11): 2620-2625, 2022 11 25.
Artículo en Inglés | MEDLINE | ID: mdl-36318598

RESUMEN

We report the discovery of talaropeptins A (1) and B (2), tripeptides with an unusual 5/6/5 heterocyclic scaffold and an N-trans-cinnamoyl moiety, which were identified from the marine-derived fungus Talaromyces purpureogenus CX11. A bioinformatic analysis of the genome of T. purpureogenus CX11 and gene inactivation revealed that the biosynthesis of talaropeptins involves a nonribosomal peptide synthase gene cluster. Their chemical structures were elucidated using a combination of 1D and 2D NMR spectroscopy and mass spectrometry. The absolute configurations of 1 and 2 were established by electronic circular dichroism calculations and Marfey's method. The plausible biosynthesis of 1 and 2 is also proposed on the basis of gene deletion, substrate feeding, and heterologous expression. Compounds 1 and 2 showed moderate antifungal activity against phytopathogenic fungus Fusarium oxysporum with MIC values of 12.5 and 25 µg/mL, respectively.


Asunto(s)
Antifúngicos , Oligopéptidos , Talaromyces , Antifúngicos/química , Antifúngicos/aislamiento & purificación , Antifúngicos/farmacología , Dicroismo Circular , Espectroscopía de Resonancia Magnética , Estructura Molecular , Talaromyces/química , Oligopéptidos/química , Oligopéptidos/aislamiento & purificación , Oligopéptidos/farmacología
6.
J Sci Food Agric ; 102(3): 1095-1104, 2022 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-34312867

RESUMEN

BACKGROUND: Angiotensin-converting enzyme (ACE) inhibitory peptides are potential alternatives to the synthetic ACE inhibitory drugs, but the in vivo antihypertensive effects of most of them have not been confirmed. The tripeptide Leu-Pro-Pro (LPP) is one of the few peptides that have been proved clinically effective in reducing the blood pressure of hypertensive patients and casein is currently its major source. LPP is contained in multiple fractions of zein, and corn gluten meal (CGM) is hence a potential new source of LPP. For this purpose, CGM was fermented with a Lactobacillus helveticus strain and the medium composition was optimized; the decoloration of the resultant hydrolysate was investigated as well. RESULTS: LPP could be successfully released from CGM by fermentation with the strain Lactobacillus helveticus CICC 22536. The highest LPP content and protein recovery of 561 mg kg-1 and 14.92% occurred in the medium containing 20 g L-1 glucose, 15 g L-1 beef extract, 60 g L-1 CGM, 10 g L-1 CaCO3 , 0.5 g L-1 NaCl, and inoculation amount 6%. The supplementation of Flavourzyme® further improved the two parameters to 662 mg kg-1 and 36.94%, respectively. The permeate of the hydrolysate after ultrafiltration through a 5 kDa membrane could be effectively decolored by the macroporous resin XAD-16 without notable protein loss, and its LPP content was further boosted to 743 mg kg-1 . CONCLUSION: CGM is a potential new source of LPP and its ultrafiltered and decolored hydrolysate could be used to develop new antihypertensive functional foods. © 2021 Society of Chemical Industry.


Asunto(s)
Glútenes/metabolismo , Lactobacillus helveticus/metabolismo , Oligopéptidos/metabolismo , Zea mays/química , Zea mays/microbiología , Inhibidores de la Enzima Convertidora de Angiotensina/análisis , Inhibidores de la Enzima Convertidora de Angiotensina/aislamiento & purificación , Inhibidores de la Enzima Convertidora de Angiotensina/metabolismo , Antihipertensivos/análisis , Antihipertensivos/aislamiento & purificación , Antihipertensivos/metabolismo , Fermentación , Glútenes/análisis , Oligopéptidos/análisis , Oligopéptidos/aislamiento & purificación
7.
Nutrients ; 13(6)2021 Jun 17.
Artículo en Inglés | MEDLINE | ID: mdl-34204516

RESUMEN

Peptic ulcer has a serious impact on people's health around the world, and traditional medicines can cause adverse reactions. This study investigated the protective effects of tilapia collagen oligopeptides (TCOPs) on gastroduodenal injury. Seventy-two specific pathogen-free (SPF) male Sprague Dawley (SD) rats were randomly divided into six groups according to body weight: normal control group, ethanol group, whey protein group (500 mg/kg BW), and three TCOPs dose groups (250, 500, 1000 mg/kg BW). After intragastric administration for 30 days, the acute gastroduodenal injury was induced by anhydrous ethanol (5 mL/kg, intragastrically) in all groups except the normal control group. Biomarkers in gastric and duodenal tissue and serum were measured. Furthermore, western blot was used to detect the expression of apoptosis-related proteins. The results showed that the administration with TCOPs significantly reduced gastric and duodenal ulcer index, increased gastric juice pH, superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GSH-Px) activities, along with the reduction of malondialdehyde (MDA) contents. TCOPs decreased tumor Necrosis Factor-α (TNF-α), interleukin-1ß (IL-1ß), and myeloperoxidase (MPO) levels, while interleukin- 10 (IL-10) levels were increased. Furthermore, pepsinogens 1 (PG1), pepsinogens 2 (PG2), gastrin (GAS), and the pepsinogen ratio (PGR) were decreased, the prostaglandin E2 (PGE2) and NO contents were increased after TCOPs intervention. Moreover, TCOPs up-regulated the expression of Bcl-2 and inhibited the expression of Bax and Caspase-3. In conclusion, TCOPs have protective effects on ethanol-induced gastroduodenal injury through gastrointestinal mucosal microcirculation promotion, antioxidation, anti-inflammation, and anti-apoptosis mechanisms.


Asunto(s)
Antiinflamatorios/farmacología , Etanol/efectos adversos , Oligopéptidos/aislamiento & purificación , Oligopéptidos/farmacología , Tilapia/metabolismo , Animales , Antioxidantes/farmacología , Apoptosis/efectos de los fármacos , Biomarcadores , Catalasa/metabolismo , Colágeno , Citocinas/metabolismo , Modelos Animales de Enfermedad , Tracto Gastrointestinal/lesiones , Interleucina-1beta , Masculino , Malondialdehído/metabolismo , Peroxidasa/metabolismo , Ratas , Ratas Sprague-Dawley , Superóxido Dismutasa/metabolismo , Factor de Necrosis Tumoral alfa/metabolismo
8.
Arch Pharm (Weinheim) ; 354(11): e2100204, 2021 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-34313364

RESUMEN

Ganoderma lucidum or Lingzhi (Chinese) is a medicinal fungus widely used in traditional medicine as a health supplement. This study was conducted to identify an approach to enhance the anti-tyrosinase activity of a peptide from G. lucidum by chemical modification of its C-terminus. The original peptide was obtained from protease-digested Lingzhi proteins, followed by ultrafiltration (molecular weight cut-off 3 kDa) and C18 solid-phase extraction. The hexapeptide (NH2 -VLTCGF-COOH) possessing the anti-tyrosinase activity was identified by liquid chromatography-tandem mass spectrometry (LC-MS/MS). This hexapeptide was subjected to shortening to enhance the anti-tyrosinase activity. Both the original peptide and the shortened peptides were synthesized by solid-phase peptide synthesis. The purity and mass of the synthetic peptide and the modified peptide were evaluated by high-performance liquid chromatography and LC-MS, respectively. Comparison of the tyrosinase activities showed that the modified peptide demonstrated more than 23.27 ± 1.07% activity, which was better than that of the hexapeptide. The structure-related biological activity was explained by molecular docking, wherein the VLT-tyrosinase complex showed two interaction forces: Asn260 and Gly281 through H-bonding and Glu256 through electrostatic interaction. This information could help toward gaining further understanding of the correlation between the anti-tyrosinase activity and the molecular structure of the modified hexapeptide and support its potential use as a safe cosmetic ingredient with tyrosinase-suppressing ability.


Asunto(s)
Inhibidores Enzimáticos/farmacología , Monofenol Monooxigenasa/antagonistas & inhibidores , Oligopéptidos/farmacología , Reishi/química , Cromatografía Líquida de Alta Presión , Cromatografía Liquida , Inhibidores Enzimáticos/química , Inhibidores Enzimáticos/aislamiento & purificación , Simulación del Acoplamiento Molecular , Oligopéptidos/química , Oligopéptidos/aislamiento & purificación , Relación Estructura-Actividad , Espectrometría de Masas en Tándem
9.
Food Chem Toxicol ; 151: 112111, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-33716052

RESUMEN

Biologically active peptides released by proteins are important in regulating immunity. The purpose of this study was to isolate and purify an immunologically active peptide from Hericium erinaceus (H. erinaceus) and to explore its effect on cytokine secretion and differentiation of macrophages. An active peptide with an amino acid sequence, Lys-Ser-Pro-Leu-Tyr (KSPLY) was obtained from H. erinaceus protein by ultrafiltration combined with multistage chromatography separation and identification technology. Subsequently, it was confirmed that the synthetic peptide KSPLY had a good immunomodulatory activity at a concentration of 100 µmol/L and could promote the secretion of NO, IL-1ß, IL-6 and TNF-α by macrophages. The effects of KSPLY on M1 macrophages and M2 macrophages were also studied. Results showed that KSPLY inhibited the secretion of NO and IL-6 by M1 macrophages and promoted the tendency of M2 macrophages to transform to M1 macrophages. Therefore, it can be concluded that KSPLY is an effective immunomodulatory peptide that may be beneficial in cancer treatment and human health improvement.


Asunto(s)
Adyuvantes Inmunológicos/farmacología , Hericium/química , Macrófagos/efectos de los fármacos , Oligopéptidos/aislamiento & purificación , Proteínas de Plantas/química , Animales , Polaridad Celular/efectos de los fármacos , Concentración de Iones de Hidrógeno , Interleucina-1beta/metabolismo , Interleucina-6/metabolismo , Macrófagos/metabolismo , Ratones , Oligopéptidos/química , Oligopéptidos/farmacología , Hidrolisados de Proteína/química , Células RAW 264.7 , Factor de Crecimiento Transformador alfa/metabolismo
10.
Biotechnol Lett ; 43(5): 1075-1087, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-33591462

RESUMEN

Based on the specific and spontaneous formation of isopeptide bonds by SpyCatcher/SpyTag, we have developed a one-step method for purification and immobilization of recombinant proteins. The procedure is to immobilize SpyCatcher on glyoxyl agarose gels, and then the SpyCatcher immobilisate can be used to immobilize the SpyTag-fused protein in the crude extract selectively. A mutant of SpyCatcher (mSC), in which a peptide (LysGlyLysGlyLysGly) was added to the C-terminus of SpyCatcher and three lysine residues around the SpyTag/SpyCatcher binding domain were replaced with arginine, was designed to improve the attachment of SpyCatcher to the support. Compared with wild-type SpyCatcher, mSC can be immobilized on the glyoxyl-agarose support more efficiently, which enables the obtained mSC derivative a high binding capacity of the SpyTag-fused protein. The results showed that the target proteins in the crude enzyme extract were purified and immobilized in one step, and the thermal stability of the immobilized target proteins was also remarkably improved.


Asunto(s)
Proteínas Inmovilizadas/aislamiento & purificación , Proteínas Recombinantes/aislamiento & purificación , Adhesinas Bacterianas/química , Adhesinas Bacterianas/genética , Secuencia de Aminoácidos , Glioxilatos/química , Proteínas Inmovilizadas/química , Proteínas Inmovilizadas/metabolismo , Mutación , Oligopéptidos/química , Oligopéptidos/aislamiento & purificación , Estabilidad Proteica , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/aislamiento & purificación , Proteínas Recombinantes de Fusión/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Sefarosa/química , Temperatura
11.
Protein Pept Lett ; 28(7): 831-840, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33573539

RESUMEN

BACKGROUND: Many fishes have been known for their good nutritional effects especially in the cardiovascular aspect. Some specific fish peptides have anti-hypertensive effects. OBJECTIVE: In the present study, we hypothesized that the hexapeptide (MEVFVP) from flounder fish muscle can be a potent antihypertensive peptide, therefore, decided to perform this experiment. METHODS: The peptide MEVFVP from flounder fish muscle (40 mg/kg) and vehicle were administered per os to spontaneously hypertensive rats (SHRs) (SHR-M and SHR-C, respectively). Additionally, plasma MEVFVP was measured serially before and after its oral administration to Sprague Dawley rats. RESULTS: Blood pressures (BPs), especially systolic BP, in SHR rats were decreased around 3-6 hours after MEVFVP administration. Compared with SHR-C rats, endothelin-1 (ET-1) mRNA expression in multiple tissues, and plasma levels of ET-1, angiotensin II, and aldosterone were lower in SHR-M rats, whereas the phosphorylation of AMP-activated protein kinase (AMPK) was increased in the kidney of SHR-M rats. The administered peptide was not detected in rat plasma, while ex vivo incubation of the peptide in rat plasma caused its rapid degradation within minutes. CONCLUSION: Our results show that the MEVFVP has an antihypertensive effect by regulating renin- angiotensin-aldosterone system, ET-1 and AMPK despite its limited bioavailability.


Asunto(s)
Antihipertensivos/farmacología , Endotelina-1/genética , Proteínas de Peces/farmacología , Lenguado/metabolismo , Hipertensión/tratamiento farmacológico , Oligopéptidos/farmacología , Sistema Renina-Angiotensina/efectos de los fármacos , Proteínas Quinasas Activadas por AMP/genética , Proteínas Quinasas Activadas por AMP/metabolismo , Administración Oral , Aldosterona/metabolismo , Secuencia de Aminoácidos , Angiotensina II/genética , Angiotensina II/metabolismo , Animales , Antihipertensivos/aislamiento & purificación , Antihipertensivos/farmacocinética , Presión Sanguínea/efectos de los fármacos , Endotelina-1/antagonistas & inhibidores , Endotelina-1/metabolismo , Proteínas de Peces/aislamiento & purificación , Proteínas de Peces/farmacocinética , Regulación de la Expresión Génica , Hipertensión/genética , Hipertensión/metabolismo , Hipertensión/fisiopatología , Riñón/efectos de los fármacos , Riñón/metabolismo , Riñón/fisiopatología , Masculino , Músculos/química , Oligopéptidos/aislamiento & purificación , Oligopéptidos/farmacocinética , Ratas , Ratas Endogámicas SHR , Ratas Sprague-Dawley , Sistema Renina-Angiotensina/genética , Transducción de Señal
12.
Int Immunopharmacol ; 90: 107140, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33187909

RESUMEN

The Meretrix meretrix is abundantly present in the Indian coastal areas which can be used as an important useful bioactive source for industrial applications. The M. meretrix visceral mass (MMV) was hydrolysed with four different enzymes and verified for anti-inflammatory activity with the help of HRBC membrane stabilization (HMS) and albumin denaturation (AD) assay. Among the hydrolysates, the tryptic 6th hour hydrolysate was selected for purification using ultrafiltration and size-exclusion chromatography (SEC). Further, the purified peptide was identified to have six amino acid sequence (HKGQCC, 675.582 Da). However, to confirm the anti-inflammatory effects of the purified peptide, it was investigated for nitric oxide synthase (iNOS), pro-inflammatory cytokines production as well as cyclooxygenase-2 (COX-2) activation in lipopolysaccharide (LPS)-stimulated RAW264.7 cells and also evaluated for its functional properties. The in-vitro gastrointestinal digestion was performed on the peptide which cleaved the peptide into two i.e. MMV1 (HK, 284.1 Da) and MMV2 (GQCC, 410.1 Da). The data suggested that the MMV2 peptide have maximum activity and was found to be stable at high temperatures. The MMV2 peptide demonstrated abrupt localization throughout the adult zebrafish body and successfully downregulated the mRNA levels of inflammation-related genes in LPS-induced adult zebrafish. This study indicates that the peptide MMV2 possesses anti-inflammatory activity by suppressing the induced inflammation and can be a strong competitor against non-steroidal anti-inflammatory drugs (NSAIDs).


Asunto(s)
Antiinflamatorios/farmacología , Bivalvos/química , Edema/prevención & control , Inflamación/prevención & control , Oligopéptidos/farmacología , Animales , Antiinflamatorios/aislamiento & purificación , Ciclooxigenasa 2/metabolismo , Citocinas/metabolismo , Modelos Animales de Enfermedad , Edema/inducido químicamente , Edema/metabolismo , Inflamación/inducido químicamente , Inflamación/metabolismo , Mediadores de Inflamación/metabolismo , Lipopolisacáridos , Ratones , Óxido Nítrico Sintasa de Tipo II/metabolismo , Oligopéptidos/aislamiento & purificación , Células RAW 264.7 , Factores de Tiempo , Pez Cebra
13.
J Chromatogr A ; 1635: 461777, 2021 Jan 04.
Artículo en Inglés | MEDLINE | ID: mdl-33302140

RESUMEN

Supramolecular solvents (dubbed SUPRAS) are gaining momentum as extractants of compounds of interest from complex matrixes such as foodstuff and biological and environmental samples. However, their powerful extraction mechanism, based on multiligand ability for solute binding, fails when applied to very polar compounds, hindering their applicability to the extraction of highly polar metabolites. In this work, we introduce the synthesis, characterization, and application of a new kind of SUPRAS formed by heptafluorobutyric acid (HFBA). The polar hydrophobicity of this perfluorinated acid results in a SUPRAS, which coacervates at acidic pHs, that shows a great capability to extract amino acids and oligopeptides (recoveries in the range 81-105%) with nonpolar alkyl, cyclic or aromatic side chain substituents (with log D > -3.62). To further demonstrate the potential of this novel SUPRAS, an analytical methodology for the determination of opiorphin in real saliva samples was developed and fully validated. The HFBA-based SUPRAS was synthetized in situ from 950 µL of stabilized saliva, by the addition of 150 µL of HFBA and 400 µL of HCl 37% (v/v). The resulting SUPRAS was directly injected into a LC-MS/MS system for further quantification. Quantitative recoveries in the range of 87-110% were obtained with relative standard deviations below 20%. The HFBA-based SUPRAS is, therefore, capable of efficiently extracting opiorphin from saliva samples and shows a high potential for the determination of several amino acids and oligopeptides from biological samples.


Asunto(s)
Técnicas de Química Analítica/métodos , Oligopéptidos/aislamiento & purificación , Saliva/química , Proteínas y Péptidos Salivales/aislamiento & purificación , Cromatografía Liquida , Humanos , Interacciones Hidrofóbicas e Hidrofílicas , Solventes/química , Espectrometría de Masas en Tándem
14.
STAR Protoc ; 1(2): 100083, 2020 09 18.
Artículo en Inglés | MEDLINE | ID: mdl-33111116

RESUMEN

This protocol describes immunoprecipitation of proteins associated with FLAG-tagged recombinant proteins followed by mass spectrometry-based proteomics to identify the associated interactome components. FLAG epitope was chosen, because existing high-affinity monoclonal antibodies allow for sensitive immunoprecipitation and FLAG peptides permit efficient elution of protein complexes. With many commercially available FLAG tools, this protocol is highly versatile. This procedure reduces immunoprecipitation of nonspecific binding proteins. Gene ontology analyses performed following mass spectrometry-based proteomics may elucidate novel functions of proteins of interest. For complete details on the use and application of this protocol, please refer to Valdez-Sinon et al. (2020).


Asunto(s)
Inmunoprecipitación/métodos , Oligopéptidos/aislamiento & purificación , Proteínas Recombinantes/aislamiento & purificación , Anticuerpos Monoclonales/inmunología , Epítopos/química , Oligopéptidos/química , Oligopéptidos/inmunología , Proteínas Recombinantes de Fusión/inmunología
15.
Amino Acids ; 52(10): 1391-1401, 2020 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-33030623

RESUMEN

The study aimed to identify bioactive peptide from Meretrix meretrix Linnaeus foot (MMF) and examine its potential of suppressing inflammation. In brief, the anti-inflammatory activity was identified by erythrocyte membrane protection and protein denaturation assay from MMF peptic 9th-h hydrolysate and was separated with three molecular weight cut-off units. The obtained four fractions were testified for activity and the fraction (10-3 kDa) with maximum activity was purified using gel permeation chromatography. Finally, the peptide sequence was identified as Asn-Pro-Ala-Gln-Asp-Cys (647.559 Da) by liquid chromatography-tandem mass spectrometry (LC-MS/MS). The hexapeptide was characterised for functional properties at different pH range. The non-toxic hexapeptide was able to reduce the cyclooxygenase (COX)-2 activation, pro-inflammatory cytokines and nitric oxide (NO) production significantly in RAW264.7 macrophage cells. The current results propose that the hexapeptide derived from MMF protein can act as an effective anti-inflammatory against pro-inflammatory cytokines, COX-2 and NO. Moreover, it could be used as an effective alternative source for drugs in pharma and also as an ingredient in food industries.


Asunto(s)
Antiinflamatorios/farmacología , Bivalvos/química , Oligopéptidos/farmacología , Secuencia de Aminoácidos , Animales , Antiinflamatorios/química , Antiinflamatorios/aislamiento & purificación , Ciclooxigenasa 2/metabolismo , Citocinas/metabolismo , Membrana Eritrocítica/efectos de los fármacos , Membrana Eritrocítica/metabolismo , Humanos , Macrófagos/efectos de los fármacos , Macrófagos/metabolismo , Ratones , Peso Molecular , Óxido Nítrico/metabolismo , Oligopéptidos/química , Oligopéptidos/aislamiento & purificación , Células RAW 264.7
16.
Biomed Pharmacother ; 132: 110807, 2020 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-33068939

RESUMEN

Colorectal cancer (CRC) is a stem cell-based disease. PIK3CA/KRAS-mutant CRC stem cells (CRCSCs) display high self-renewal, metastatic properties, high activity of PI3K and KRAS signaling pathways with chemoresistant phenotypes. Recently, RGD peptide (containing Arg-Gly-Asp motif)-based therapy of solid tumor cells has attracted much attention. However, little is known whether this method can target self-renewal capacity, key effectors of PI3K and KRAS signaling pathways such as metastasis-driver gene CXCR4 and stem cell regulatory genes with caspase-3 reactivation in CRCSCs overexpressing RGD-dependent integrins. The sea anemone Actinia fragacea produces a water-soluble RGD-peptide fragacea toxin C (FraC) suggesting the possible activity of FraC against PIK3CA/KRAS-mutant CRCSCs. Recombinant FraC was expressed via pET-28a(+)-FraC in E. coli and purified through affinity chromatography followed by performing SDS-PAGE and hemolytic activity assay. Next, PIK3CA/KRAS-mutant HCT-116 cells that serve as an attractive model for CRCSCs were treated with FraC. Thereafter, cell numbers, viability, proliferation, LDH activity, cytotoxicity index, CXCR4 and pluripotency network genes expression, self-renewal capacity, caspase-3 activity with apoptosis were evaluated. Caspase-1, -2, -3,…, -9 sequences were analyzed for RGD-binding motifs. FraC sequence and structure were also evaluated by bioinformatics software. FraC altered cellular morphology to round shapes and disrupted cell connections. 48 h post-treatment with 0.056- to 7.2 µM FraC resulted in 12 %-99 % and 8 %-97.6 % decreases in cell numbers and viabilities respectively and increased LDH activity by 0.2 %-66.7 % in a dose-dependent manner. The results of the cytotoxicity index showed that FraC induces significant toxicity on HCT-116 cells compared to PBMCs and Huvec cells. FraC dramatically decreased the expression of CXCR4 and pluripotency network genes Bmi-1, Sox-2, Oct-4 and Nanog followed by remarkable decreases in self-renewal capacity ranged from 91- to 0 colonies per well for 0.056- to 3.6 µM FraC after 2 weeks. Caspase-3 was found to contain an RGD-binding motif and its activity increased with increasing FraC concentrations followed by apoptosis induction. Potential RGD-binding motifs for FraC were also found in caspase-1, -7, -8 and -9. Unique advantages of FraC peptide, such as low molecular weight, water solubility, high sensitivity of CRC stem-like cells with more selective toxicity to this compound, targeting tumor cell membrane and self-renewal capacity along with the modulation of CXCR4 and stem cell regulatory genes as upstream and downstream effectors of undruggable PI3K and KRAS signaling pathways may open up avenues for FraC peptide-based therapy of PIK3CA/KRAS-mutant CRCSCs with lower toxicity on healthy cells.


Asunto(s)
Venenos de Cnidarios/farmacología , Neoplasias Colorrectales/tratamiento farmacológico , Oligopéptidos/farmacología , Anémonas de Mar/metabolismo , Animales , Antineoplásicos/química , Antineoplásicos/aislamiento & purificación , Antineoplásicos/farmacología , Apoptosis/genética , Línea Celular Tumoral , Autorrenovación de las Células/efectos de los fármacos , Fosfatidilinositol 3-Quinasa Clase I/genética , Venenos de Cnidarios/química , Venenos de Cnidarios/aislamiento & purificación , Neoplasias Colorrectales/genética , Genes Reguladores/genética , Células HCT116 , Humanos , Mutación , Células Madre Neoplásicas/citología , Oligopéptidos/química , Oligopéptidos/aislamiento & purificación , Proteínas Proto-Oncogénicas p21(ras)/genética , Receptores CXCR4/genética , Transducción de Señal/efectos de los fármacos , Solubilidad
17.
Protein Expr Purif ; 176: 105727, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-32835791

RESUMEN

Pulmonary surfactant protein-A (SP-A) is expressed by lung alveolar and bronchiolar epithelial cells and plays a critical role in innate immunity of the lung. Exposure of the lung to various environmental insults alters SP-A homeostasis. To investigate the cellular mechanisms involved in these alterations, we added the FLAG octapeptide (DYKDDDDK) to the carboxy-terminus (SP-A/C-FLAG) or near the amino-terminus (SP-A/N-FLAG) of mouse SP-A (WT-SP-A) to tag specific pools of protein. We hypothesized that addition of FLAG would have negligible effects on SP-A expression, oligomerization and secretion. Analysis of Chinese hamster ovary cells expressing these proteins indicated that tagged SP-A mRNA could be distinguished from WT-SP-A by northern analysis and RT-PCR using sequence-specific oligonucleotides. Tagged SP-A protein could be differentiated from WT-SP-A by western analysis using antibodies specific for the FLAG epitope. Subcellular fractionation and immunocytochemistry indicated the majority of each protein was present in punctuate (presumably endocytic) vesicles, and all forms of SP-A protein were secreted. These results suggest that a FLAG epitope added to the carboxy-terminus or inserted into the amino-terminus of the mature SP-A protein has little effect on its expression and cellular processing. However, disruptions of the amino-terminal end of SP-A prevents proper oligomerization, suggesting that this region of mature SP-A is critical in proper oligomeric assembly and is not useful for studies intended to define mechanisms underlying SP-A homeostasis.


Asunto(s)
Expresión Génica , Oligopéptidos/química , Multimerización de Proteína , Proteína A Asociada a Surfactante Pulmonar/química , Proteínas Recombinantes de Fusión/química , Animales , Ratones , Oligopéptidos/biosíntesis , Oligopéptidos/genética , Oligopéptidos/aislamiento & purificación , Proteína A Asociada a Surfactante Pulmonar/biosíntesis , Proteína A Asociada a Surfactante Pulmonar/genética , Proteína A Asociada a Surfactante Pulmonar/aislamiento & purificación , Proteínas Recombinantes de Fusión/biosíntesis , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/aislamiento & purificación
18.
Biomolecules ; 10(9)2020 08 19.
Artículo en Inglés | MEDLINE | ID: mdl-32825031

RESUMEN

In this study, an alternative method is developed to replace chemical synthesis to produce glycyl-histidyl-lysine (GHK) tripeptides with a bacterial fermentation system. The target GHK tripeptides are cloned into expression plasmids carrying histidine-glutathione-S-transferase (GST) double tags and TEV (tobacco etch virus) cleavage sites at the N-terminus. After overexpression in Escherichia coli (E. coli) BL21 cells, the recombinant proteins are purified and recovered by high-pressure liquid chromatography (HPLC). UV-vis absorption spectroscopy was used to investigate the chemical and biological properties of the recombinant GHK tripeptides. The results demonstrated that one recombinant GHK tripeptide can bind one copper ion to form a GHK-Cu complex with high affinity, and the recombinant GHK peptide to copper ion ratio is 1:1. X-ray absorption near-edge spectroscopy (XANES) of the copper ions indicated that the oxidation state of copper in the recombinant GHK-Cu complexes here was Cu(II). All of the optical spectrum evidence suggests that the recombinant GHK tripeptide appears to possess the same biophysical and biochemical features as the GHK tripeptide isolated from human plasma. Due to the high binding affinity of GHK tripeptides to copper ions, we used zebrafish as an in vivo model to elucidate whether recombinant GHK tripeptides possess detoxification potential against the cardiotoxicity raised by waterborne Cu(II) exposure. Here, exposure to Cu(II) induced bradycardia and heartbeat irregularity in zebrafish larvae; however, the administration of GHK tripeptides could rescue those experiencing cardiotoxicity, even at the lowest concentration of 1 nM, where the GHK-Cu complex minimized CuSO4-induced cardiotoxicity effects at a GHK:Cu ratio of 1:10. On the other hand, copper and the combination with the GHK tripeptide did not significantly alter other cardiovascular parameters, including stroke volume, ejection fraction, and fractional shortening. Meanwhile, the heart rate and cardiac output were boosted after exposure with 1 nM of GHK peptides. In this study, recombinant GHK tripeptide expression was performed, along with purification and chemical property characterization, which revealed a potent cardiotoxicity protection function in vivo with zebrafish for the first time.


Asunto(s)
Bradicardia/tratamiento farmacológico , Cobre/toxicidad , Oligopéptidos/farmacología , Contaminantes Químicos del Agua/toxicidad , Animales , Frecuencia Cardíaca/efectos de los fármacos , Oligopéptidos/biosíntesis , Oligopéptidos/aislamiento & purificación , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Pez Cebra
19.
Nucl Med Commun ; 41(9): 977-985, 2020 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-32796487

RESUMEN

INTRODUTION:: [Ga]Ga-prostate specific membrane antigen (PSMA)-11 showed a clear gain in sensitivity for lesion detection in the biological recurrence of prostate cancer as compared to the standard [F]fluorocholine radiopharmaceutical. To meet the strong demand for [Ga]Ga-PSMA-11, we aimed to optimize an automated radiolabeling process by evaluating the influence of different key parameters on radiochemical purity and radiochemical yield. METHODS: The radiosynthesis of [Ga]Ga PSMA-11 was performed using a Trasis MiniAio synthesizer and a Ge/Ga GalliaPharm generator supplied by Eckert & Ziegler, Berlin, Germany. Optimized labeling parameters were evaluated by variation of sodium acetate concentrations and temperature of radiolabeling as well as the purification process. RESULTS: For each condition tested, radiochemical purity was higher than 99% in the final vial without batch failure, indicating a robust and fast radiosynthesis process. Radiosynthesis without the solid phase extraction purification process at room temperature in less than 5 min resulted in a radiolabeling efficiency of over 99% and remained stable at least 4 h without manual processing to limit operator radiation exposure. CONCLUSION: The procedure was completely automated and provided a high radiochemical yield. It can be performed several times a day, facilitating the clinical demand of this radiopharmaceutical.


Asunto(s)
Ácido Edético/análogos & derivados , Calor , Oligopéptidos/química , Oligopéptidos/síntesis química , Radioquímica/métodos , Ácido Edético/síntesis química , Ácido Edético/química , Ácido Edético/aislamiento & purificación , Isótopos de Galio , Radioisótopos de Galio , Marcaje Isotópico , Oligopéptidos/aislamiento & purificación , Radioquímica/instrumentación , Acetato de Sodio/química
20.
Chembiochem ; 21(20): 2991-2996, 2020 10 15.
Artículo en Inglés | MEDLINE | ID: mdl-32470183

RESUMEN

Herein, we report the targeted isolation and characterization of four linear nonribosomally synthesized tetrapeptides (pseudoxylaramide A-D) and two cyclic nonribosomal peptide synthetase-polyketide synthase-derived natural products (xylacremolide A and B) from the termite-associated stowaway fungus Pseudoxylaria sp. X187. The fungal strain was prioritized for further metabolic analysis based on its taxonomical position and morphological and bioassay data. Metabolic data were dereplicated based on high-resolution tandem mass spectrometry data and global molecular networking analysis. The structure of all six new natural products was elucidated based on a combination of 1D and 2D NMR analysis, Marfey's analysis and X-ray crystallography.


Asunto(s)
Productos Biológicos/química , Descubrimiento de Drogas , Oligopéptidos/química , Péptidos Cíclicos/química , Policétidos/química , Termitomyces/química , Productos Biológicos/aislamiento & purificación , Cristalografía por Rayos X , Modelos Moleculares , Conformación Molecular , Resonancia Magnética Nuclear Biomolecular , Oligopéptidos/aislamiento & purificación , Péptidos Cíclicos/aislamiento & purificación , Policétidos/aislamiento & purificación , Estereoisomerismo
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