Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 36
Filtrar
Más filtros










Base de datos
Intervalo de año de publicación
1.
Int J Syst Evol Microbiol ; 70(8): 4798-4807, 2020 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-32783804

RESUMEN

Leptographium panxianense and L. puerense are proposed as new taxa based on sequence data and morphological characters. The phylogenetic analyses based on ITS2-partial LSU rDNA region, ß-tubulin and elongation factor 1-α genes showed that L. panxianense and L. puerense formed well-supported clades and were closely related to L. yunnanense, L. wushanense and L. conjunctum, and then nested within the L. lundbergii complex. The two species differ in their conidial size and shape. The conidia of L. panxianense are larger than those of L. puerense while the conidial shape of L. puerense is more ovovoid. The optimal growth temperature of both L. panxianense and L. puerense is at 20 °C, which is different from those of L. yunnanense, L. wushanense and L. conjunctum. Comparison of sequence data and morphological characters confirmed the placement of the two undescribed taxa in the genus of Leptographium.


Asunto(s)
Escarabajos/microbiología , Ophiostomatales/clasificación , Filogenia , Pinus , Animales , China , ADN de Hongos/genética , ADN Ribosómico/genética , Técnicas de Tipificación Micológica , Ophiostomatales/aislamiento & purificación , Factor 1 de Elongación Peptídica/genética , Análisis de Secuencia de ADN , Esporas Fúngicas , Tubulina (Proteína)/genética
2.
Mycologia ; 112(6): 1240-1262, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32634330

RESUMEN

During surveys of insect-associated mycobiomes in Norway, Poland, and Russia, isolates with affinity to Graphilbum (Ophiostomatales, Ascomycota) were recovered. In this study, eight known Graphilbum species as well as the newly collected isolates were compared based on morphology and DNA sequence data for four gene regions. The results revealed seven new species, described here as G. acuminatum, G. carpaticum, G. curvidentis, G. furuicola, G. gorcense, G. interstitiale, and G. sexdentatum. In addition to these species, G. crescericum and G. sparsum were commonly found in Norway. All new species were recovered from conifers in association with bark beetles, cerambycid beetles, and weevils and were morphologically similar, predominantly with pesotum-like asexual morphs. Where sexual morphs were present, these were small ascomata with short necks and rod-shaped ascospores having hyaline sheaths. The results suggest that Graphilbum species are common members of the Ophiostomatales in conifer ecosystems.


Asunto(s)
Escarabajos/microbiología , Ophiostomatales/clasificación , Ophiostomatales/genética , Filogenia , Tracheophyta/microbiología , Animales , ADN de Hongos/genética , ADN Espaciador Ribosómico/genética , Noruega , Ophiostomatales/aislamiento & purificación , Polonia , ARN Ribosómico/genética , Federación de Rusia , Esporas Fúngicas , Gorgojos/microbiología
3.
Fungal Biol ; 124(2): 110-124, 2020 02.
Artículo en Inglés | MEDLINE | ID: mdl-32008752

RESUMEN

The Grosmannia penicillata complex (Ophiostomatales, Ascomycota) is one of the major species complexes in Leptographium sensu lato. Most of these are wood staining fungi associated with conifer-infesting bark beetles, and the complex encompasses the type species of the genus Grosmannia. Yet the phylogenetic relationships of species within the complex is unresolved. The aim of this study was to re-evaluate the circumscriptions of all known species in the G. penicillata complex, as well as isolates resembling G. penicillata obtained from a recent survey in China. Phylogenetic analyses of four gene regions: Internal transcribed spacer 2 and large subunit (ITS2-LSU), beta-tubulin (TUB), calmodulin (CAL), and translation elongation factor 1 alpha (TEF-1α) resolved the relationships of 15 species, including four new species (Grosmannia xianmiense sp nov., Grosmannia purpurea sp. nov., Grosmannia crassifolia sp. nov. and Grosmannia maixiuense sp. nov.), from China. Some isolates from pine in the USA that had previously been identified as Grosmannia abietina, represented a distinct taxon that is described here as Grosmannia xeno-abietina sp. nov.


Asunto(s)
Ophiostomatales , Animales , Calmodulina/genética , China , Clasificación , ADN Espaciador Ribosómico/genética , Ophiostomatales/clasificación , Ophiostomatales/genética , Ophiostomatales/aislamiento & purificación , Factor 1 de Elongación Peptídica/genética , Filogenia , Tracheophyta/microbiología , Tubulina (Proteína)/genética , Estados Unidos , Gorgojos/microbiología
4.
Fungal Biol ; 122(12): 1142-1158, 2018 12.
Artículo en Inglés | MEDLINE | ID: mdl-30449352

RESUMEN

Ophiostoma spp. (Ophiostomatales, Ascomycota) are well-known fungi associated with bark and ambrosia beetles (Curculionidae: Scolytinae, Platypodinae). Fungi in the Ophiostomatales include serious tree pathogens as well as agents of timber blue-stain. Although these fungi have been extensively studied in the northern hemisphere, very little is known regarding their occurrence on hardwoods in Europe. The aims of the present study were to identify and characterize new Ophiostoma spp. associated with bark and ambrosia beetles infesting hardwoods in Norway and Poland, and to resolve phylogenetic relationships of Ophiostoma spp. related to the Norwegian and Polish isolates, using multigene phylogenetic analyses. Results obtained from five gene regions (ITS, LSU, ß-tubulin, calmodulin, translation elongation factor 1-α) revealed four new Ophiostoma spp. These include Ophiostoma hylesinum sp. nov., O. signatum sp. nov., and O. villosum sp. nov. that phylogenetically are positioned within the Ophiostoma ulmi complex. The other new species, Ophiostoma pseudokarelicum sp. nov. reside along with Ophiostoma karelicum in a discrete, well-supported phylogenetic group in Ophiostoma s. stricto. The results of this study clearly show that the diversity and ecology of Ophiostoma spp. on hardwoods in Europe is poorly understood and that further studies are required to enrich our knowledge about these fungi.


Asunto(s)
Ophiostomatales/clasificación , Ophiostomatales/aislamiento & purificación , Filogenia , Gorgojos/microbiología , Madera/parasitología , Animales , Calmodulina/genética , Análisis por Conglomerados , ADN de Hongos/química , ADN de Hongos/genética , ADN Ribosómico/química , ADN Ribosómico/genética , ADN Espaciador Ribosómico/química , ADN Espaciador Ribosómico/genética , Noruega , Ophiostomatales/genética , Factor 1 de Elongación Peptídica/genética , Polonia , ARN Ribosómico/genética , Análisis de Secuencia de ADN , Tubulina (Proteína)/genética
5.
Antonie Van Leeuwenhoek ; 111(12): 2323-2347, 2018 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-29980901

RESUMEN

Species of Leptographium are characterized by mononematous or synnematous conidiophores and are commonly associated with different arthropods. Some of them also produce a sexual state characterised by globose ascomata with elongated necks. Compared to investigations on coniferous trees, the occurrence of Leptographium species on hardwood trees has been poorly studied in Europe. During a survey of ophiostomatoid fungi on various hardwood tree species in Norway and Poland, three unusual species, which fit in the broader morphological description of Leptographium spp., were found in association with Trypodendron domesticum, Trypodendron signatum and Dryocoetes alni, and from wounds on a variety of hardwoods. Phylogenetic analyses of sequence data for six different loci (ITS1-5.8 S-ITS2, ITS2-LSU, ACT, ß-tubulin, CAL, and TEF-1α) showed that these Leptographium species are phylogenetically closely related to the species of the Grosmannia olivacea complex. The first species forms a well-supported lineage that includes Ophiostoma brevicolle, while the two other new taxa resided in a separate lineage; possibly affiliated with Grosmannia francke-grosmanniae. All the new species produce perithecia with necks terminating in ostiolar hyphae and orange-section shaped ascospores with cucullate, gelatinous sheaths. These species also produce dark olivaceous mononematous asexual states in culture. In addition, two of the newly described species have a second type of conidiophore with a short and non-pigmented stipe. The new Leptographium species can be easily distinguished from each other by their appearance and growth in culture. Based on novel morphological characters and distinct DNA sequences, these fungi were recognised as new taxa for which the names Leptographium tardum sp. nov., Leptographium vulnerum sp. nov., and Leptographium flavum sp. nov. are provided.


Asunto(s)
Alnus/microbiología , ADN de Hongos/genética , Fagus/microbiología , Ophiostomatales/clasificación , Filogenia , Quercus/microbiología , Alnus/parasitología , Animales , Escarabajos/microbiología , Código de Barras del ADN Taxonómico , Fagus/parasitología , Hifa/clasificación , Hifa/genética , Hifa/ultraestructura , Noruega , Ophiostomatales/genética , Ophiostomatales/aislamiento & purificación , Filogeografía , Enfermedades de las Plantas/microbiología , Enfermedades de las Plantas/parasitología , Polonia , Quercus/parasitología , Esporas Fúngicas/clasificación , Esporas Fúngicas/genética , Esporas Fúngicas/ultraestructura
6.
Antonie Van Leeuwenhoek ; 110(12): 1537-1553, 2017 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-28687978

RESUMEN

Species of Leptographium are generally characterized by mononematous conidiophores and are commonly associated with bark beetles and weevils. These species are responsible for sapstain and in some cases serious diseases on a range of primarily coniferous trees. In comparison with coniferous trees, the occurrence of Leptographium species on hardwood trees has been poorly studied in Europe. During a survey of ophiostomatoid fungi on various tree species in Norway and Poland, three unusual species, which fit the broader morphological description of Leptographium spp., were found in association with Scolytus ratzeburgi, Dryocoetes alni and Trypodendron domesticum on a variety of hardwoods, and from wounds on Tilia cordata. Phylogenetic analyses of sequence data for three gene regions (ITS2-LSU, ß-tubulin, and TEF1-α) showed that these Leptographium species are phylogenetically closely related to each other and form a well-supported lineage that included Grosmannia grandifoliae and Leptographium pruni. The first species could be distinguished from the other Leptographium species based on conidiophores arising from spiral hyphae, chlamydospore-like structures and a hyalorhinocladiella-like synanamorph in culture. The second species differs from the previous one by having distinctly shorter conidiophores and smaller conidia. This species also produces a well-developed sporothrix-like synanamorph with denticulate conidiogenous cells. Based on these unusual morphological characteristics and distinct DNA sequences, these fungi were recognised as new taxa for which the names Leptographium trypodendri sp. nov. and L. betulae sp. nov. are provided. The third group of isolates belonged to Grosmannia grandifoliae, representing the first report of this species outside of the USA. The newly defined G. grandifoliae complex is the first species complex in Leptographium s.l. consisting of only hardwood-infecting species.


Asunto(s)
Ophiostomatales/clasificación , Madera/microbiología , Secuencia de Bases , ADN Espaciador Ribosómico , Genes Fúngicos , Sistemas de Lectura Abierta , Ophiostomatales/genética , Ophiostomatales/aislamiento & purificación , Fenotipo , Enfermedades de las Plantas/microbiología , Polimorfismo Genético , Árboles/microbiología
7.
Fungal Biol ; 121(1): 82-94, 2017 01.
Artículo en Inglés | MEDLINE | ID: mdl-28007219

RESUMEN

Appropriate management of invasive fungi requires adequate understanding of their global diversities and movement histories. The fungus Leptographium procerum is associated with root-colonizing forest insects in pine forests throughout the world, and may have contributed to the aggressive behaviour of the red turpentine beetle (Dendroctonus valens) in the beetle's invasive range in China. We used microsatellites and mating type loci to investigate the global diversity of L. procerum and the source population of L. procerum associated with D. valens in China. Clustering analyses supported the separation of the fungal data set into three genetically and geographically-distinct clusters: Europe, North America, and China. The fungus had the highest genetic diversity in Europe, followed by North America and China. Analyses using Approximate Bayesian Computation supported Europe as the most likely source of the North American and Chinese populations. Overall, the results suggested that Europe is the global centre of diversity of L. procerum. Furthermore, they suggested that L. procerum most likely arrived in China independently of D. valens and adopted this beetle as a vector after its introduction.


Asunto(s)
Variación Genética , Genotipo , Insectos/microbiología , Ophiostomatales/clasificación , Ophiostomatales/genética , Filogenia , Animales , China , Análisis por Conglomerados , Europa (Continente) , Genes del Tipo Sexual de los Hongos , Repeticiones de Microsatélite , América del Norte , Ophiostomatales/aislamiento & purificación
8.
Fungal Biol ; 120(11): 1323-1340, 2016 11.
Artículo en Inglés | MEDLINE | ID: mdl-27742092

RESUMEN

There have been many recent studies using environmental nucleic acid sequences (ENAS) to assess fungal diversity. As a result, more than a third of all fungal sequences in GenBank are of environmental origin. But inconsistent annotation of the thousands of undescribed taxa represented by these sequences limits access to these data. Consequently, these ENAS and the taxa they represent are rarely considered in other studies, and especially not in taxonomic treatments. This problem is confounded by the fact that the current version of the International Code of Nomenclature for Algae, Fungi, and Plants (Melbourne Code) prohibits the description of novel taxa known only from ENAS. There have been suggestions to emend the Code to allow a systematic nomenclatural treatment of these currently 'orphan' taxa but this has yet to occur. In this study, we considered the feasibility of using sequences from environmental studies to resolve the generic status of Sporothrix lignivora. This species forms a single lineage distinct from Sporothrix and other genera in the Ophiostomatales. BLAST searches in GenBank using LSU and ITS sequences of S. lignivora corresponded with several sequences from environmental studies. This also led to the discovery of isolates collected in diversity studies based on culturable fungi, with high similarity to S. lignivora. Phylogenetic analyses including taxa representing all major genera and lineages in the Ophiostomatales revealed a distinct, well-supported lineage that included S. lignivora and the ENAS. This confirmed the presence of a new genus in the Ophiostomatales described here as Hawksworthiomyces gen. nov., with S. lignivora as type species. Whereas only one described species was known in the so-called S. lignivora complex, our analyses revealed nine additional lineages in what is now Hawksworthiomyces. For three of these lineages, we were able to obtain isolates and these are described as Hawksworthiomyces taylorii sp. nov., Hawksworthiomyces crousii sp. nov., and Hawksworthiomyces hibbettii sp. nov. Five of the lineages each included one or more sequences from single studies, and thus remain unnamed. The remaining lineage included two sequences from separate studies of fungi inhabiting conifer wood. One of these sequences was an uncultured fungus clone from a spruce log in Sweden. The other sequence was for an isolate from a western red cedar fencepole in British Columbia, Canada, that was subsequently lost. These two ITS sequences differ in only two nucleotide positions. We are confident that they represent the same taxon and meet the criteria for an ENAS species, for which we provide the name, Hawksworthiomyces sequentia sp. nov. ENAS, and designate a DNA sequence as type in the absence of a type specimen. This case study makes it clear that environmental sequences and those from lost isolates can be extremely valuable in phylogeny-based taxonomic studies. It emphasises the fact that the Code should be emended to enable the naming of such taxa in a manner that will facilitate their incorporation in other studies.


Asunto(s)
Escarabajos/microbiología , ADN de Hongos/genética , Ophiostomatales/clasificación , Ophiostomatales/aislamiento & purificación , Plantas/microbiología , Animales , ADN Espaciador Ribosómico/genética , Datos de Secuencia Molecular , Ophiostomatales/genética , Filogenia
9.
Antonie Van Leeuwenhoek ; 109(12): 1555-1571, 2016 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-27562287

RESUMEN

Mangrove trees are continuously under stress due to environmental and/or anthropogenic pressures, which expose them to attack by pathogens, compromising their survival. Ophiostomatoid fungi cause sap stain and diseases of a wide spectrum of tree species globally. These fungi infect trees through natural, insect, animal and/or human made wounds. During routine surveys of mangrove trees in South Africa, wounds on branches and stems of Avicennia marina were regularly monitored for the presence of ophiostomatoid fungi at ten study sites in the country. The stems of four mangrove species, A. marina, Bruguiera gymnorrhiza, Rhizophora mucronata and Barringtonia racemosa were also wounded and evaluated for the appearance of these fungi. Ophiostomatoid fungi were obtained from the mangrove associate B. racemosa, but not from any of the true mangroves. Analyses of DNA sequence data for the internal transcribed spacer, ß-tubulin, calmodulin and translation elongation factor gene regions revealed that the fungi isolated from the wounds on B. racemosa belong to three species in the Ophiostomataceae, including a new taxon described here as Ophiostoma palustre sp. nov. These results suggest that the mangrove associate B. racemosa is more prone to colonization by ophiostomatoid fungi than the true mangroves.


Asunto(s)
Avicennia/microbiología , Barringtonia/microbiología , Ophiostomatales/aislamiento & purificación , Rhizophoraceae/microbiología , Ophiostoma/clasificación , Ophiostoma/aislamiento & purificación , Ophiostomatales/clasificación , Filogenia , Sudáfrica , Humedales
10.
Antonie Van Leeuwenhoek ; 109(6): 877-94, 2016 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-27022984

RESUMEN

Rapanea melanophloeos, an important canopy tree in Afromontane forests, is commonly utilised for medicinal bark harvesting. Wounds created from these activities provide entrance for many fungi, including arthropod-associated members of the Ophiostomatales and Microascales (ophiostomatoid fungi). In this study we assessed the diversity of wound-associated Ophiostomatales on storm-damaged R. melanophloeos trees in the Afromontane forests of South Africa. Five species were identified based on micro-morphological and molecular phylogenetic analyses. These included Ophiostoma stenoceras and four newly described taxa Sporothrix itsvo sp. nov., S. rapaneae sp. nov., S. uta sp. nov. and O. noisomeae sp. nov. Four of these are members of the S. schenckii-O. stenoceras complex (O. stenoceras, S. itsvo sp. nov., S. rapaneae sp. nov., S. uta sp. nov.) while O. noisomeae groups basal in the Ophiostomatales alongside the S. lignivora complex and Graphilbum. In addition to other taxa known from this host, the present study shows that there is a rich, yet still poorly explored, diversity of Ophiostomatales associated with R. melanophloeos in Afromontane forests. More taxa are likely to be discovered with increased research effort. These must be assessed in terms of pathogenicity towards this ecologically and economically important tree.


Asunto(s)
Ophiostomatales/clasificación , Primulaceae/microbiología , Biodiversidad , ADN de Hongos/genética , ADN Espaciador Ribosómico , Ecosistema , Ophiostomatales/genética , Ophiostomatales/crecimiento & desarrollo , Ophiostomatales/aislamiento & purificación , Filogenia , Enfermedades de las Plantas/microbiología , ARN de Hongos/genética , ARN Ribosómico/genética , Análisis de Secuencia de ADN , Sudáfrica
11.
Antonie Van Leeuwenhoek ; 109(4): 589-601, 2016 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-26846285

RESUMEN

Euphorbia ingens trees have been dying in large numbers in the Limpopo Province of South Africa for approximately 15 years. The ambrosia beetle Cyrtogenius africus is often found infesting diseased and dying trees. The aim of this study was to identify the ophiostomatoid fungi occurring in the galleries of C. africus. Logs infested with this beetle were collected from the KwaZulu-Natal, Limpopo, Mpumalanga, and North West Provinces of South Africa. Fungi belonging to the Ophiostomatales were identified based on morphology and comparison of sequence data for the ß-tubulin, ITS1-5.8S-ITS2 and LSU gene regions. A novel species of Ophiostoma and a novel genus in the Ophiostomatales were identified. Inoculation studies with these fungi produced lesions in the branches of healthy E. ingens trees.


Asunto(s)
Euphorbia/parasitología , Ophiostomatales/clasificación , Ophiostomatales/aislamiento & purificación , Enfermedades de las Plantas/microbiología , Gorgojos/microbiología , Animales , Secuencia de Bases , ADN de Hongos/genética , Ophiostoma/clasificación , Ophiostoma/genética , Ophiostoma/aislamiento & purificación , Ophiostoma/patogenicidad , Ophiostomatales/genética , Reacción en Cadena de la Polimerasa/métodos , Análisis de Secuencia de ADN , Sudáfrica , Árboles/microbiología , Tubulina (Proteína)/genética
12.
Antonie Van Leeuwenhoek ; 108(4): 933-50, 2015 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-26275876

RESUMEN

Olea capensis and Rapanea melanophloeos are important canopy trees in South African Afromontane forests. Dying or recently dead individuals of these trees are often infested by Scolytinae and Platypodinae (Curculionidae) beetles. Fungi were isolated from the surfaces of beetles emerging from wood samples and their galleries. Based on micro-morphological and phylogenetic analyses, four fungal species in the Ophiostomatales were isolated. These were Sporothrix pallida and three taxa here newly described as Sporothrix aemulophila sp. nov., Raffaelea vaginata sp. nov. and Raffaelea rapaneae sp. nov. This study represents the first collection of S. pallida, a species known from many environmental samples from across the world, from Scolytinae beetles. S. aemulophila sp. nov. is an associate of the ambrosia beetle Xyleborinus aemulus. R. rapaneae sp. nov. and R. vaginata sp. nov. were associated with a Lanurgus sp. and Platypodinae beetle, respectively, and represent the first Raffaelea spp. reported from the Cape Floristic Region. Of significance is that R. vaginata produced a sexual state analogous with those of Ophiostoma seticolle and O. deltoideosporum that also grouped in our analyses in Raffaelea s. str., to date considered an asexual genus. The morphology of the ossiform ascospores and anamorphs of the three species corresponded and the generic circumscription of Raffaelea is thus emended to accommodate sexual states. The two known species are provided with new combinations, namely Raffaelea seticollis (R.W. Davidson) Z.W. de Beer and T.A. Duong comb. nov. and Raffaelea deltoideospora (Olchow. and J. Reid) Z.W. de Beer and T.A. Duong comb. nov.


Asunto(s)
Ophiostomatales/clasificación , Ophiostomatales/aislamiento & purificación , Gorgojos/microbiología , Animales , Análisis por Conglomerados , ADN de Hongos/química , ADN de Hongos/genética , ADN Ribosómico/química , ADN Ribosómico/genética , ADN Espaciador Ribosómico/química , ADN Espaciador Ribosómico/genética , Genes de ARNr , Técnicas Microbiológicas , Microscopía , Datos de Secuencia Molecular , Ophiostomatales/genética , Ophiostomatales/fisiología , Filogenia , ARN de Hongos/genética , ARN Ribosómico/genética , Análisis de Secuencia de ADN
13.
Fungal Biol ; 119(7): 615-30, 2015 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-26058537

RESUMEN

Little is known about the biology of the monotypic genus Cornuvesica (Microascales), apart from that isolates are notoriously difficult to culture on artificial media. A recent collection of material resembling this genus from freshly made wounds on Gmelina arborea in Indonesia, provided an opportunity to reconsider all available material of Cornuvesica falcata, type species of the genus. In addition to morphological comparisons, multigene phylogenetic analyses were made using sequences of the SSU, ITS, LSU and TEF-1α genes. Our results showed that the holotype of Cor. falcata from pine in Canada differed from all other material previously considered to represent this species and also from the new Indonesian collections. The collections considered represented three additional species that we describe here as new. Three New Zealand isolates and an isolate from UK were respectively described as Cor. acuminata and Cor. crypta, while the Indonesian isolates were described as Cor. magnispora. Phylogenies based on the SSU and LSU data sets showed that Cornuvesica spp. do not belong in the Ceratocystidaceae as previously suggested, but represent a distinct lineage in the Microascales that has yet to be named. Results showed that culture filtrates from other fungi or ferric chloride markedly stimulated the growth of Cor. magnispora.


Asunto(s)
Lamiaceae/microbiología , Ophiostomatales/aislamiento & purificación , ADN de Hongos/genética , ADN Ribosómico/genética , Datos de Secuencia Molecular , Ophiostomatales/clasificación , Ophiostomatales/genética , Ophiostomatales/crecimiento & desarrollo , Filogenia , Corteza de la Planta/microbiología
14.
Antonie Van Leeuwenhoek ; 107(2): 547-63, 2015 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-25510728

RESUMEN

Leptographium procerum (Ophiostomatales, Ascomycota) is a well-known fungal associate of pine root-infesting bark beetles and weevils, occurring in several countries of the world. The fungus is not a primary pathogen but has been associated with white pine root decline in the USA and with serious damage caused by the introduced red turpentine beetle (RTB) Dendroctonus valens in China. Several species closely related to L. procerum have been described during the past decade. The aim of this study was to reevaluate species boundaries in the L. procerum complex using multigene phylogenetic analyses and morphological comparisons. Phylogenetic analyses of seven gene regions (ITS2-LSU, actin, ß-tubulin, calmodulin, translation elongation factor 1-α, and the mating type genes MAT1-1-3 and MAT1-2-1) distinguished between nine species in the complex. These included L. procerum, L. bhutanense, L. gracile, L. profanum, L. pini-densiflorae, L. sibiricum, L. sinoprocerum, as well as two new species described here as Leptographium sinense sp. nov. from Hylobitelus xiaoi on Pinus elliottii in China, and Leptographium longiconidiophorum sp. nov. from Pinus densiflora in Japan. Leptographium latens is reduced to synonymy with L. gracile, and an epitype is designated for L. procerum, because a living culture associated with the holotype of L. procerum did not exist. Amplification patterns of the mating type genes suggest that all known species in the L. procerum complex are heterothallic, although sexual states have not been observed for any of the species. The results also suggest that Eastern Asia is most probably the centre of species diversity for the L. procerum complex.


Asunto(s)
Ophiostomatales/clasificación , Ophiostomatales/genética , Filogenia , Animales , Análisis por Conglomerados , ADN de Hongos/química , ADN de Hongos/genética , ADN Espaciador Ribosómico/química , ADN Espaciador Ribosómico/genética , Proteínas Fúngicas/genética , Genes del Tipo Sexual de los Hongos , Datos de Secuencia Molecular , Ophiostomatales/aislamiento & purificación , Análisis de Secuencia de ADN , Gorgojos/microbiología
15.
Fungal Biol ; 118(12): 970-8, 2014 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-25457944

RESUMEN

The genus Raffaelea was established in 1965 when the type species, Raffaelea ambrosia, a symbiont of Platypus ambrosia beetles was described. Since then, many additional ambrosia beetle symbionts have been added to the genus, including the important tree pathogens Raffaelea quercivora, Raffaelea quercus-mongolicae, and Raffaelea lauricola, causal agents of Japanese and Korean oak wilt and laurel wilt, respectively. The discovery of new and the dispersal of described species of Raffaelea to new areas, where they can become invasive, presents challenges for diagnosticians as well as plant protection and quarantine efforts. In this paper, we present the first comprehensive multigene phylogenetic analysis of Raffaelea. As it is currently defined, the genus was found to not be monophyletic. On the basis of this work, Raffaelea sensu stricto is defined and the affinities of undescribed isolates are considered.


Asunto(s)
Escarabajos/microbiología , Ophiostomatales/clasificación , Filogenia , Animales , ADN de Hongos/genética , Ophiostomatales/genética , Ophiostomatales/aislamiento & purificación , Análisis de Secuencia de ADN , Simbiosis
16.
Antonie Van Leeuwenhoek ; 106(6): 1167-84, 2014 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-25253585

RESUMEN

Many bark beetles live in a symbiosis with ophiostomatoid fungi but very little is known regarding these fungi in Spain. In this study, we considered the fungi associated with nine bark beetle species and one weevil infesting two native tree species (Pinus sylvestris and Pinus nigra) and one non-native (Pinus radiata) in Cantabria (Northern Spain). This included examination of 239 bark beetles or their galleries. Isolations yielded a total of 110 cultures that included 11 fungal species (five species of Leptographium sensu lato including Leptographium absconditum sp. nov., five species of Ophiostoma sensu lato including Ophiostoma cantabriense sp. nov, and one species of Graphilbum). The most commonly encountered fungal associates of the bark beetles were Grosmannia olivacea, Leptographium procerum, and Ophiostoma canum. The aggressiveness of the collected fungal species was evaluated using inoculations on two-year-old P. radiata seedlings. Leptographium wingfieldii, Leptographium guttulatum, and Ophiostoma ips were the only species capable of causing significant lesions.


Asunto(s)
Escarabajos/microbiología , Ophiostomatales/clasificación , Ophiostomatales/aislamiento & purificación , Animales , Calmodulina/genética , Análisis por Conglomerados , ADN de Hongos/química , ADN de Hongos/genética , ADN Intergénico/química , ADN Intergénico/genética , Datos de Secuencia Molecular , Ophiostomatales/genética , Ophiostomatales/fisiología , Filogenia , Pinus/parasitología , Raíces de Plantas/parasitología , Análisis de Secuencia de ADN , España , Simbiosis , Tubulina (Proteína)/genética
17.
Mycologia ; 106(1): 119-32, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24603836

RESUMEN

Ophiostoma species, some of which cause sapstain in timber and/or are mild pathogens, are common fungal associates of bark beetles (Coleoptera: Scolytinae). Three new Ophiostomataceae from Spain are recognized in the present study based on comparisons of sequence data for three gene regions as well as morphological characteristics. The new taxa are described as Ophiostoma nebulare sp. nov., Ophiostoma euskadiense sp. nov. and Graphilbum crescericum sp. nov.


Asunto(s)
Escarabajos/microbiología , Ophiostomatales/clasificación , Ophiostomatales/aislamiento & purificación , Filogenia , Pinus/parasitología , Animales , Datos de Secuencia Molecular , Ophiostomatales/genética , Ophiostomatales/crecimiento & desarrollo , España , Esporas Fúngicas/clasificación , Esporas Fúngicas/genética , Esporas Fúngicas/crecimiento & desarrollo , Esporas Fúngicas/aislamiento & purificación
18.
Mol Biol Evol ; 31(6): 1454-74, 2014 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-24627033

RESUMEN

Studies on beetle/tree fungal symbionts typically characterize the ecological and geographic distributions of the fungal populations. There is limited understanding of the genome-wide evolutionary processes that act within and between species as such fungi adapt to different environments, leading to physiological differences and reproductive isolation. Here, we assess genomic evidence for such evolutionary processes by extending our recent work on Grosmannia clavigera, which is vectored by the mountain pine beetle and jeffrey pine beetle. We report the genome sequences of an additional 11 G. clavigera (Gc) sensu lato strains from the two known sibling species, Grosmannia sp. (Gs) and Gc. The 12 fungal genomes are structurally similar, showing large-scale synteny within and between species. We identified 103,430 single-nucleotide variations that separated the Grosmannia strains into divergent Gs and Gc clades, and further divided each of these clades into two subclades, one of which may represent an additional species. Comparing variable genes between these lineages, we identified truncated genes and potential pseudogenes, as well as seven genes that show evidence of positive selection. As these variable genes are involved in secondary metabolism and in detoxifying or utilizing host-tree defense chemicals (e.g., polyketide synthases, oxidoreductases, and mono-oxygenases), their variants may reflect adaptation to the specific chemistries of the host trees Pinus contorta, P. ponderosa, and P. jeffreyi. This work provides a comprehensive resource for developing informative markers for landscape population genomics of these ecologically and economically important fungi, and an approach that could be extended to other beetle-tree-associated fungi.


Asunto(s)
Escarabajos/microbiología , Ophiostomatales/clasificación , Ophiostomatales/genética , Pinus/microbiología , Animales , Variación Genética , Genoma Fúngico , Genómica , Especificidad del Huésped , Filogenia , Polimorfismo de Nucleótido Simple , Selección Genética , Simbiosis
19.
Mol Ecol Resour ; 14(2): 401-10, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24152017

RESUMEN

Single-nucleotide polymorphisms (SNPs) are rapidly becoming the standard markers in population genomics studies; however, their use in nonmodel organisms is limited due to the lack of cost-effective approaches to uncover genome-wide variation, and the large number of individuals needed in the screening process to reduce ascertainment bias. To discover SNPs for population genomics studies in the fungal symbionts of the mountain pine beetle (MPB), we developed a road map to discover SNPs and to produce a genotyping platform. We undertook a whole-genome sequencing approach of Leptographium longiclavatum in combination with available genomics resources of another MPB symbiont, Grosmannia clavigera. We sequenced 71 individuals pooled into four groups using the Illumina sequencing technology. We generated between 27 and 30 million reads of 75 bp that resulted in a total of 1, 181 contigs longer than 2 kb and an assembled genome size of 28.9 Mb (N50 = 48 kb, average depth = 125x). A total of 9052 proteins were annotated, and between 9531 and 17,266 SNPs were identified in the four pools. A subset of 206 genes (containing 574 SNPs, 11% false positives) was used to develop a genotyping platform for this species. Using this roadmap, we developed a genotyping assay with a total of 147 SNPs located in 121 genes using the Illumina(®) Sequenom iPLEX Gold. Our preliminary genotyping (success rate = 85%) of 304 individuals from 36 populations supports the utility of this approach for population genomics studies in other MPB fungal symbionts and other fungal nonmodel species.


Asunto(s)
Genoma Fúngico , Técnicas de Genotipaje/métodos , Técnicas de Tipificación Micológica/métodos , Ophiostomatales/clasificación , Ophiostomatales/genética , Polimorfismo de Nucleótido Simple , Animales , ADN de Hongos/química , ADN de Hongos/genética , Datos de Secuencia Molecular , Ophiostomatales/aislamiento & purificación , Análisis de Secuencia de ADN , Gorgojos/microbiología
20.
Fungal Biol ; 117(6): 411-21, 2013 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-23809651

RESUMEN

Leptographium procerum and the closely related species Leptographium profanum, are ascomycetes associated with root-infesting beetles on pines and hardwood trees, respectively. Both species occur in North America where they are apparently native. L. procerum has also been found in Europe, China New Zealand, and South Africa where it has most probably been introduced. As is true for many other Leptographium species, sexual states have never been observed in L. procerum or L. profanum. The objectives of this study were to clone and characterize the mating type loci of these fungi, and to develop markers to determine the mating types of individual isolates. To achieve this, a partial sequence of MAT1-2-1 was amplified using degenerate primers targeting the high mobility group (HMG) sequence. A complete MAT1-2 idiomorph of L. profanum was subsequently obtained by screening a genomic library using the HMG sequence as a probe. Long range PCR was used to amplify the complete MAT1-1 idiomorph of L. profanum and both the MAT1-1 and MAT1-2 idiomorphs of L. procerum. Characterization of the MAT idiomorphs suggests that the MAT genes are fully functional and that individuals of both these species are self-sterile in nature with a heterothallic mating system. Mating type markers were developed and tested on a population of L. procerum isolates from the USA, the assumed center of origin for this species. The results suggest that cryptic sexual reproduction is occurring or has recently taken place within this population.


Asunto(s)
Genes del Tipo Sexual de los Hongos , Ophiostomatales/genética , Animales , Clonación Molecular , Escarabajos/microbiología , ADN de Hongos/química , ADN de Hongos/genética , Marcadores Genéticos , Variación Genética , Datos de Secuencia Molecular , Ophiostomatales/clasificación , Ophiostomatales/aislamiento & purificación , Análisis de Secuencia de ADN , Estados Unidos
SELECCIÓN DE REFERENCIAS
DETALLE DE LA BÚSQUEDA
...