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1.
PLoS Pathog ; 19(1): e1010482, 2023 01.
Artículo en Inglés | MEDLINE | ID: mdl-36696453

RESUMEN

Post-Transcriptional Gene Silencing (PTGS) is a defense mechanism that targets invading nucleic acids of endogenous (transposons) or exogenous (pathogens, transgenes) origins. During plant infection by viruses, virus-derived primary siRNAs target viral RNAs, resulting in both destruction of single-stranded viral RNAs (execution step) and production of secondary siRNAs (amplification step), which maximizes the plant defense. As a counter-defense, viruses express proteins referred to as Viral Suppressor of RNA silencing (VSR). Some viruses express VSRs that totally inhibit PTGS, whereas other viruses express VSRs that have limited effect. Here we show that infection with the Turnip yellow mosaic virus (TYMV) is enhanced in Arabidopsis ago1, ago2 and dcl4 mutants, which are impaired in the execution of PTGS, but not in dcl2, rdr1 and rdr6 mutants, which are impaired in the amplification of PTGS. Consistently, we show that the TYMV VSR P69 localizes in siRNA-bodies, which are the site of production of secondary siRNAs, and limits PTGS amplification. Moreover, TYMV induces the production of the host enzyme RNASE THREE-LIKE 1 (RTL1) to further reduce siRNA accumulation. Infection with the Tobacco rattle virus (TRV), which also encodes a VSR limiting PTGS amplification, induces RTL1 as well to reduce siRNA accumulation and promote infection. Together, these results suggest that RTL1 could be considered as a host susceptibility gene that is induced by viruses as a strategy to further limit the plant PTGS defense when VSRs are insufficient.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Enfermedades de las Plantas , Proteínas Represoras , Tymovirus , Arabidopsis/genética , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Mutación , Proteínas Represoras/genética , Proteínas Represoras/metabolismo , Ribonucleasa III/genética , Ribonucleasa III/metabolismo , Interferencia de ARN , ARN Interferente Pequeño/genética , ARN Interferente Pequeño/metabolismo , Tymovirus/genética , Tymovirus/metabolismo , Enfermedades de las Plantas/genética , Enfermedades de las Plantas/virología
2.
Nat Nanotechnol ; 14(7): 712-718, 2019 07.
Artículo en Inglés | MEDLINE | ID: mdl-31110265

RESUMEN

Large doses of chemical pesticides are required to achieve effective concentrations in the rhizosphere, which results in the accumulation of harmful residues. Precision farming is needed to improve the efficacy of pesticides, but also to avoid environmental pollution, and slow-release formulations based on nanoparticles offer one solution. Here, we tested the mobility of synthetic and virus-based model nanopesticides by combining soil column experiments with computational modelling. We found that the tobacco mild green mosaic virus and cowpea mosaic virus penetrate soil to a depth of at least 30 cm, and could therefore deliver nematicides to the rhizosphere, whereas the Physalis mosaic virus remains in the first 4 cm of soil and would be more useful for the delivery of herbicides. Our experiments confirm that plant viruses are superior to synthetic mesoporous silica nanoparticles and poly(lactic-co-glycolic acid) for the delivery and controlled release of pesticides, and could be developed as the next generation of pesticide delivery systems.


Asunto(s)
Agricultura/métodos , Preparaciones de Acción Retardada/metabolismo , Virus del Mosaico/metabolismo , Plaguicidas/metabolismo , Microbiología del Suelo , Comovirus/metabolismo , Nanopartículas/metabolismo , Suelo/química , Virus del Mosaico del Tabaco/metabolismo , Tymovirus/metabolismo
3.
Plant Sci ; 284: 99-107, 2019 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-31084885

RESUMEN

Phloem-mobile mRNAs are assumed to contain sequence elements directing RNA to the phloem translocation pathway. One of such elements is represented by tRNA sequences embedded in untranslated regions of many mRNAs, including those proved to be mobile. Genomic RNAs of a number of plant viruses possess a 3'-terminal tRNA-like structures (TLSs) only distantly related to genuine tRNAs, but nevertheless aminoacylated and capable of interaction with some tRNA-binding proteins. Here, we elaborated an experimental system for analysis of RNA phloem transport based on an engineered RNA of Potato virus X capable of replication, but not encapsidation and movement in plants. The TLSs of Brome mosaic virus, Tobacco mosaic virus and Turnip yellow mosaic virus were demonstrated to enable the phloem transport of foreign RNA. A miRNA precursor, pre-miR390b, was also found to render RNA competent for the phloem transport. In line with this, sequences of miRNA precursors were identified in a Cucurbita maxima phloem transcriptome, supporting the hypothesis that, at least in some cases, miRNA phloem signaling can involve miRNA precursors. Collectively, the data presented here suggest that RNA molecules can be directed into the phloem translocation pathway by structured RNA elements such as those of viral TLSs and miRNA precursors.


Asunto(s)
MicroARNs/metabolismo , Floema/metabolismo , ARN de Planta/metabolismo , ARN de Transferencia/metabolismo , Bromovirus/metabolismo , Cucurbita/metabolismo , Cucurbita/virología , MicroARNs/fisiología , Floema/fisiología , Potexvirus/metabolismo , ARN de Transferencia/fisiología , Virus del Mosaico del Tabaco/metabolismo , Tymovirus/metabolismo
4.
PLoS One ; 12(5): e0178222, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28558046

RESUMEN

A new species of the family Alphaflexiviridae provisionally named alfalfa virus S (AVS) was discovered in alfalfa samples originating from Sudan. A complete nucleotide sequence of the viral genome consisting of 8,349 nucleotides excluding the 3' poly(A) tail was determined by high throughput sequencing (HTS) on an Illumina platform. NCBI BLAST searches revealed that the virus shares the greatest degree of sequence identity with members of the family Alphaflexiviridae, genus Allexivirus. The AVS genome contains six computationally-predicted open reading frames (ORF) encoding viral replication protein, triple gene block protein 1 (TGB1), TGB2, TGB3-like protein, unknown 38.4 kDa protein resembling serine-rich 40 kDa protein characteristic for allexiviruses, and coat protein (CP). AVS lacks a clear 3' proximal ORF that encodes a nucleic acid-binding protein typical for allexiviruses. The identity of the virus was confirmed by RT-PCR with primers derived from the HTS-generated sequence, dot blot hybridization with DIG-labeled virus-specific RNA probes, and Western blot analysis with antibodies produced against a peptide derived from the CP sequence. Transmission electron microscopic observations of the infected tissues showed the presence of filamentous particles similar to allexiviruses in their length and appearance. To the best of our knowledge, this is the first report on the identification of a putative allexivirus in alfalfa (Medicago sativa). The genome sequence of AVS has been deposited in NCBI GenBank on 03/02/2016 as accession № KY696659.


Asunto(s)
Tymovirus/clasificación , Western Blotting , Medicago sativa/virología , Microscopía Electrónica de Transmisión , Filogenia , Reacción en Cadena en Tiempo Real de la Polimerasa , Tymovirus/metabolismo
6.
Curr Opin Virol ; 17: 74-79, 2016 04.
Artículo en Inglés | MEDLINE | ID: mdl-26871502

RESUMEN

The endoplasmic reticulum and Golgi network (ERGN) is vital to most cellular biosynthetic processes. Many positive strand RNA viruses depend upon the ERGN for replication, maturation, and egress. Viruses induce changes in ER architecture and stimulate fatty acid synthesis to create environments that can scaffold replication complexes, plant virus movement complexes, or virion maturation. Potato virus X (PVX) and Turnip mosaic virus (TuMV) each encode small membrane binding proteins that embed in the ERGN and activate the unfolded protein response (UPR). The UPR ensures ERGN homeostasis in the face of environmental assaults that could negatively impact the biosynthetic functions of the ERGN. This article explores the relationship between ER stress, the UPR, and membrane synthesis occurring during virus infection.


Asunto(s)
Estrés del Retículo Endoplásmico , Retículo Endoplásmico/metabolismo , Virus de Plantas/metabolismo , Infecciones por Virus ARN/metabolismo , Virus ARN/metabolismo , Animales , Membrana Celular/metabolismo , Retículo Endoplásmico/ultraestructura , Interacciones Huésped-Patógeno , Potexvirus/metabolismo , Infecciones por Virus ARN/virología , Tymovirus/metabolismo , Respuesta de Proteína Desplegada , Proteínas Virales/metabolismo , Replicación Viral
7.
J Virol ; 89(24): 12441-56, 2015 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-26423955

RESUMEN

UNLABELLED: Positive-strand RNA [(+) RNA] viruses remodel cellular membranes to facilitate virus replication and assembly. In the case of turnip mosaic virus (TuMV), the viral membrane protein 6K2 plays an essential role in endomembrane alterations. Although 6K2-induced membrane dynamics have been widely studied by confocal microscopy, the ultrastructure of this remodeling has not been extensively examined. In this study, we investigated the formation of TuMV-induced membrane changes by chemical fixation and high-pressure freezing/freeze substitution (HPF/FS) for transmission electron microscopy at different times of infection. We observed the formation of convoluted membranes connected to rough endoplasmic reticulum (rER) early in the infection process, followed by the production of single-membrane vesicle-like (SMVL) structures at the midstage of infection. Both SMVL and double-membrane vesicle-like structures with electron-dense cores, as well as electron-dense bodies, were found late in the infection process. Immunogold labeling results showed that the vesicle-like structures were 6K2 tagged and suggested that only the SMVL structures were viral RNA replication sites. Electron tomography (ET) was used to regenerate a three-dimensional model of these vesicle-like structures, which showed that they were, in fact, tubules. Late in infection, we observed filamentous particle bundles associated with electron-dense bodies, which suggests that these are sites for viral particle assembly. In addition, TuMV particles were observed to accumulate in the central vacuole as membrane-associated linear arrays. Our work thus unravels the sequential appearance of distinct TuMV-induced membrane structures for viral RNA replication, viral particle assembly, and accumulation. IMPORTANCE: Positive-strand RNA viruses remodel cellular membranes for different stages of the infection process, such as protein translation and processing, viral RNA synthesis, particle assembly, and virus transmission. The ultrastructure of turnip mosaic virus (TuMV)-induced membrane remodeling was investigated over several days of infection. The first change that was observed involved endoplasmic reticulum-connected convoluted membrane accumulation. This was followed by the formation of single-membrane tubules, which were shown to be viral RNA replication sites. Later in the infection process, double-membrane tubular structures were observed and were associated with viral particle bundles. In addition, TuMV particles were observed to accumulate in the central vacuole as membrane-associated linear arrays. This work thus unravels the sequential appearance of distinct TuMV-induced membrane structures for viral RNA replication, viral particle assembly, and accumulation.


Asunto(s)
Retículo Endoplásmico , Membranas Intracelulares , Nicotiana , Tymovirus , Vacuolas , Retículo Endoplásmico/genética , Retículo Endoplásmico/metabolismo , Retículo Endoplásmico/ultraestructura , Retículo Endoplásmico/virología , Membranas Intracelulares/metabolismo , Membranas Intracelulares/ultraestructura , Membranas Intracelulares/virología , Nicotiana/genética , Nicotiana/metabolismo , Nicotiana/virología , Tymovirus/genética , Tymovirus/metabolismo , Tymovirus/ultraestructura , Vacuolas/efectos de los fármacos , Vacuolas/metabolismo , Vacuolas/ultraestructura , Vacuolas/virología
8.
PLoS Pathog ; 11(3): e1004755, 2015 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-25806948

RESUMEN

In eukaryotes, ARGONAUTE proteins (AGOs) associate with microRNAs (miRNAs), short interfering RNAs (siRNAs), and other classes of small RNAs to regulate target RNA or target loci. Viral infection in plants induces a potent and highly specific antiviral RNA silencing response characterized by the formation of virus-derived siRNAs. Arabidopsis thaliana has ten AGO genes of which AGO1, AGO2, and AGO7 have been shown to play roles in antiviral defense. A genetic analysis was used to identify and characterize the roles of AGO proteins in antiviral defense against Turnip mosaic virus (TuMV) in Arabidopsis. AGO1, AGO2 and AGO10 promoted anti-TuMV defense in a modular way in various organs, with AGO2 providing a prominent antiviral role in leaves. AGO5, AGO7 and AGO10 had minor effects in leaves. AGO1 and AGO10 had overlapping antiviral functions in inflorescence tissues after systemic movement of the virus, although the roles of AGO1 and AGO10 accounted for only a minor amount of the overall antiviral activity. By combining AGO protein immunoprecipitation with high-throughput sequencing of associated small RNAs, AGO2, AGO10, and to a lesser extent AGO1 were shown to associate with siRNAs derived from silencing suppressor (HC-Pro)-deficient TuMV-AS9, but not with siRNAs derived from wild-type TuMV. Co-immunoprecipitation and small RNA sequencing revealed that viral siRNAs broadly associated with wild-type HC-Pro during TuMV infection. These results support the hypothesis that suppression of antiviral silencing during TuMV infection, at least in part, occurs through sequestration of virus-derived siRNAs away from antiviral AGO proteins by HC-Pro. These findings indicate that distinct AGO proteins function as antiviral modules, and provide a molecular explanation for the silencing suppressor activity of HC-Pro.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Arabidopsis/virología , Proteínas Argonautas/metabolismo , Enfermedades de las Plantas/virología , Tymovirus/metabolismo , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Proteínas Argonautas/genética , Enfermedades de las Plantas/genética , Tymovirus/genética
9.
BMB Rep ; 46(10): 495-500, 2013 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-24148770

RESUMEN

Turnip yellow mosaic virus (TYMV) is a positive strand RNA virus. We have modified TYMV coat protein (CP) by inserting a c-Myc epitope peptide at the N- or C-terminus of the CP, and have examined its effect on assembly. We introduced the recombinant CP constructs into Nicotiana benthamiana leaves by agroinfiltration. Examination of the leaf extracts by agarose gel electrophoresis and Western blot analysis showed that the CP modified at the N-terminus produced a band co-migrating with wild-type virions. With C-terminal modification, however, the detected bands moved faster than the wild-type virions. To further examine the effect, TYMV constructs producing the modified CPs were prepared. With N-terminal modification, viral RNAs were protected from RNase A. In contrast, the viral RNAs were not protected with C-terminal modification. Overall, the results suggest that virion assembly and RNA packaging occur properly when the N-terminus of CP is modified, but not when the C-terminus is modified.


Asunto(s)
Tymovirus/metabolismo , Virión/metabolismo , Ensamble de Virus/fisiología , Proteínas de la Cápside/genética , Proteínas de la Cápside/metabolismo , Nicotiana/genética , Nicotiana/metabolismo , Tymovirus/genética , Virión/genética , Ensamble de Virus/genética
10.
J Biotechnol ; 168(4): 409-15, 2013 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-24055625

RESUMEN

Elongated and flexuous recombinant nanoparticles were derived from Turnip mosaic virus to be used as bioscaffolds for increased peptide immunogenicity and peptide-specific antibody sensing. For this purpose, a 20-amino acid peptide derived from human vascular endothelial growth factor receptor 3 (VEGFR-3) was fused to the N-terminal region of Turnip mosaic virus coat protein (CP) by genetic insertion. The insertion was between codons corresponding to the first and second amino acids of the CP in two versions of a previously reported virus-derived vector. Systemic infections of two genetic constructs were achieved in two different plant hosts. The construct proved stable upon successive passages and generated virus nanoparticles identifiable under the electron microscope. The chimeric structures held the VEGFR-3 peptide. Purified VER3 nanoparticles were used to immunize mice, whose sera showed log increases of antibodies against the VEGFR-3 peptide when compared with mice immunized with peptide alone, thus providing the first quantitative data on the potential of elongated flexuous viruses for peptide immunogenicity increases. Purified VER3 nanoparticles also showed log increases in their ability to detect VER3 antibodies in sera, when used as reagents in ELISA assays, an application also used here for the first time.


Asunto(s)
Anticuerpos/aislamiento & purificación , Péptidos/inmunología , Receptor 2 de Factores de Crecimiento Endotelial Vascular/genética , Virión/genética , Animales , Anticuerpos/inmunología , Brassica napus/virología , Humanos , Ratones , Nanopartículas/química , Péptidos/química , Péptidos/genética , Tymovirus/genética , Tymovirus/metabolismo , Receptor 2 de Factores de Crecimiento Endotelial Vascular/inmunología , Virión/inmunología
11.
PLoS Pathog ; 9(5): e1003378, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-23696741

RESUMEN

All positive-strand RNA viruses induce the biogenesis of cytoplasmic membrane-bound virus factories for viral genome multiplication. We have previously demonstrated that upon plant potyvirus infection, the potyviral 6K2 integral membrane protein induces the formation of ER-derived replication vesicles that subsequently target chloroplasts for robust genome replication. Here, we report that following the trafficking of the Turnip mosaic potyvirus (TuMV) 6K2 vesicles to chloroplasts, 6K2 vesicles accumulate at the chloroplasts to form chloroplast-bound elongated tubular structures followed by chloroplast aggregation. A functional actomyosin motility system is required for this process. As vesicle trafficking and fusion in planta are facilitated by a superfamily of proteins known as SNAREs (soluble N-ethylmaleimide-sensitive-factor attachment protein receptors), we screened ER-localized SNARES or SNARE-like proteins for their possible involvement in TuMV infection. We identified Syp71 and Vap27-1 that colocalize with the chloroplast-bound 6K2 complex. Knockdown of their expression using a Tobacco rattle virus (TRV)-based virus-induced gene silencing vector showed that Syp71 but not Vap27-1 is essential for TuMV infection. In Syp71-downregulated plant cells, the formation of 6K2-induced chloroplast-bound elongated tubular structures and chloroplast aggregates is inhibited and virus accumulation is significantly reduced, but the trafficking of the 6K2 vesicles from the ER to chloroplast is not affected. Taken together, these data suggest that Syp71 is a host factor essential for successful virus infection by mediating the fusion of the virus-induced vesicles with chloroplasts during TuMV infection.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Cloroplastos/metabolismo , Nicotiana/metabolismo , Proteínas Qc-SNARE/metabolismo , Tymovirus/metabolismo , Actomiosina/genética , Actomiosina/metabolismo , Arabidopsis/genética , Arabidopsis/virología , Proteínas de Arabidopsis/genética , Transporte Biológico Activo/genética , Cloroplastos/genética , Cloroplastos/virología , Complejos Multiproteicos/genética , Complejos Multiproteicos/metabolismo , Proteínas Qc-SNARE/genética , Nicotiana/genética , Nicotiana/virología , Tymovirus/genética
12.
J Biol Chem ; 287(35): 29729-38, 2012 Aug 24.
Artículo en Inglés | MEDLINE | ID: mdl-22773840

RESUMEN

Pokeweed antiviral protein (PAP) from Phytolacca americana is a ribosome-inactivating protein (RIP) and an RNA N-glycosidase that removes specific purine residues from the sarcin/ricin loop of large rRNA, arresting protein synthesis at the translocation step. PAP is also a cap-binding protein and is a potent antiviral agent against many plant, animal, and human viruses. To elucidate the mechanism of RNA depurination, and to understand how PAP recognizes and targets various RNAs, the interactions between PAP and turnip mosaic virus genome-linked protein (VPg) were investigated. VPg can function as a cap analog in cap-independent translation and potentially target PAP to uncapped IRES-containing RNA. In this work, fluorescence spectroscopy and HPLC techniques were used to quantitatively describe PAP depurination activity and PAP-VPg interactions. PAP binds to VPg with high affinity (29.5 nm); the reaction is enthalpically driven and entropically favored. Further, VPg is a potent inhibitor of PAP depurination of RNA in wheat germ lysate and competes with structured RNA derived from tobacco etch virus for PAP binding. VPg may confer an evolutionary advantage by suppressing one of the plant defense mechanisms and also suggests the possible use of this protein against the cytotoxic activity of ribosome-inactivating proteins.


Asunto(s)
Phytolacca americana/metabolismo , Proteínas de Unión a Caperuzas de ARN/metabolismo , Ribonucleoproteínas/metabolismo , Proteínas Inactivadoras de Ribosomas Tipo 1/metabolismo , Tymovirus/metabolismo , Proteínas no Estructurales Virales/metabolismo , Phytolacca americana/genética , Unión Proteica/genética , Proteínas de Unión a Caperuzas de ARN/genética , ARN Viral/genética , ARN Viral/metabolismo , Ribonucleoproteínas/genética , Proteínas Inactivadoras de Ribosomas Tipo 1/genética , Tymovirus/genética , Proteínas no Estructurales Virales/genética
13.
Biochemistry ; 51(7): 1388-95, 2012 Feb 21.
Artículo en Inglés | MEDLINE | ID: mdl-22299678

RESUMEN

VPg of turnip mosaic virus (TuMV) was previously shown to interact with translation initiation factor eIFiso4F and play an important role in mRNA translation [Khan, M. A., et al. (2008) J. Biol. Chem.283, 1340-1349]. VPg competed with cap analogue for eIFiso4F binding and competitively inhibited cap-dependent translation and enhanced cap-independent translation to give viral RNA a significant competitive advantage. To gain further insight into the cap-independent process of initiation of protein synthesis, we examined the effect of PABP and/or eIF4B on the equilibrium and kinetics of binding of VPg to eIFiso4F. Equilibrium data showed the addition of PABP and/or eIF4B to eIFiso4F increased the binding affinity for VPg (K(d) = 24.3 ± 1.6 nM) as compared to that with eIFiso4F alone (K(d) = 81.3 ± 0.2.4 nM). Thermodynamic parameters showed that binding of VPg to eIFiso4F was enthalpy-driven and entropy-favorable with the addition of PABP and/or eIF4B. PABP and eIF4B decreased the entropic contribution by 67% for binding of VPg to eIFiso4F. The decrease in entropy involved in the formation of the eIFiso4F·4B·PABP-VPg complex suggested weakened hydrophobic interactions for complex formation and an overall conformational change. The kinetic studies of eIFiso4F with VPg in the presence of PABP and eIF4B show 3-fold faster association (k(2) = 182 ± 9.0 s(-1)) compared to that with eIFiso4F alone (k(2) = 69.0 ± 1.5 s(-1)) . The dissociation rate was 3-fold slower (k(-2) = 6.5 ± 0.43 s(-1)) for eIFiso4F with VPg in the presence of PABP and eIF4B (k(-2) = 19.0 ± 0.9 s(-1)). The addition of PABP and eIF4B decreased the activation energy of eIFiso4F with VPg from 81.0 ± 3.0 to 44.0 ± 2.4 kJ/mol. This suggests that the presence of both proteins leads to a rapid, stable complex, which serves to sequester initiation factors.


Asunto(s)
Factor 4F Eucariótico de Iniciación/química , Factores Eucarióticos de Iniciación/química , Proteínas de Unión a Poli(A)/química , Proteínas Virales/química , Animales , ADN Complementario/metabolismo , Relación Dosis-Respuesta a Droga , Cinética , Unión Proteica , ARN Mensajero/metabolismo , Espectrometría de Fluorescencia/métodos , Temperatura , Termodinámica , Factores de Tiempo , Tymovirus/metabolismo
14.
Bioconjug Chem ; 22(1): 58-66, 2011 Jan 19.
Artículo en Inglés | MEDLINE | ID: mdl-21166476

RESUMEN

Turnip yellow mosaic virus (TYMV) is an icosahedral plant virus with a diameter of 28-30 nm that can be isolated in gram quantities from turnip or Chinese cabbage inexpensively. In this study, TYMV combined with spatially addressable surface chemistries was selected as a prototype bionanoparticle for modulating patterns of cell adhesion, morphology, and proliferation. We exploited the chemical reactivity of TYMV using the mild conditions of Cu(I) catalyzed azide-alkyne cycloaddition (CuAAC) reaction, the best example of "click" chemistry. Oligo-ethylene glycol (OEG) short chain, coumarintriazole, and RGD-containing peptide were grafted on the surface of TYMV via carbodiimide activation and CuAAC reaction. The bioconjugation to intact viral particles was confirmed by MS, TEM, FPLC, and SDS-PAGE with fluorescence visualization analysis. Therefore, this method is a generally useful means of incorporating various types of functionalities onto the TYMV surface. Further studies were done to learn the behavior of NIH-3T3 fibroblast cells on the modified or unmodified TYMV surfaces. OEG-modified TYMV surfaces retarded cell attachment and growth, while cell adhesion, spreading, and proliferation were dramatically enhanced on RGD-modified TYMV surfaces. Compared with RGD immobilized 3-aminopropyltriethoxysilane-coated glass surface, the cells are more ready to spread fully and proliferate on TYMV-RGD coated surface, which thus provides a more cell-friendly environment with nanometer-scale surface features. This illustrates the potential application of plant virus based materials in tissue engineering, drug delivery, and biosensing.


Asunto(s)
Alquinos/química , Azidas/química , Cobre/química , Nanopartículas/química , Nanopartículas/virología , Tymovirus/química , Tymovirus/metabolismo , Secuencias de Aminoácidos , Animales , Cápside/química , Cápside/metabolismo , Catálisis , Adhesión Celular , Proliferación Celular , Vidrio/química , Ratones , Modelos Moleculares , Células 3T3 NIH , Oligopéptidos/metabolismo , Polietilenglicoles/química , Propilaminas , Conformación Proteica , Silanos/química , Especificidad por Sustrato
15.
Mol Plant Microbe Interact ; 23(2): 144-52, 2010 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-20064058

RESUMEN

Strains TuR1 and TuC of Turnip mosaic virus (TuMV) induce different symptoms on Arabidopsis thaliana ecotype Landsberg erecta (Ler); plants infected with TuR1 develop systemic necrosis, while TuC causes mosaics. We previously found that the Ler systemic necrosis was controlled by a single dominant gene, TuNI (TuMV necrosis inducer), and that it was actually a form of host defense response leading to a hypersensitive reaction (HR)-like cell death. To identify the viral factor interacting with TuNI, the domain swapping between the genomic clones of TuR1 and TuC was carried out, and we identified the TuMV symptom determinant interacting with TuNI as the P3 gene. Moreover, it was found that the central 0.5-kb domain of P3, including three different amino acids between the two isolates, was responsible for the systemic HR. To verify that the P3 gene can alone induce necrosis, we analyzed the constitutive P3 expression in Ler transgenic plants and the transient P3 expression in Ler protoplasts. These results indicated that P3 alone caused HR-like cell death. In this study, we successfully demonstrated that the systemic necrosis by TuMV in Arabidopsis was determined by the gene-for-gene interaction between TuNI and P3 using the protoplast system for direct verification.


Asunto(s)
Arabidopsis/metabolismo , Genes Dominantes , Proteínas de Plantas/metabolismo , Tymovirus/metabolismo , Proteínas Virales/metabolismo , Arabidopsis/genética , Arabidopsis/virología , Muerte Celular , Proteínas de Plantas/genética , Plantas Modificadas Genéticamente , Estructura Terciaria de Proteína/genética , Tymovirus/genética , Proteínas Virales/genética
16.
Virology ; 374(1): 217-27, 2008 Apr 25.
Artículo en Inglés | MEDLINE | ID: mdl-18222516

RESUMEN

Tandem affinity purification was used in Arabidopsis thaliana to identify cellular interactors of Turnip mosaic virus (TuMV) RNA-dependent RNA polymerase (RdRp). The heat shock cognate 70-3 (Hsc70-3) and poly(A)-binding (PABP) host proteins were recovered and shown to interact with the RdRp in vitro. As previously shown for PABP, Hsc70-3 was redistributed to nuclear and membranous fractions in infected plants and both RdRp interactors were co-immunoprecipitated from a membrane-enriched extract using RdRp-specific antibodies. Fluorescently tagged RdRp and Hsc70-3 localized to the cytoplasm and the nucleus when expressed alone or in combination in Nicotiana benthamiana. However, they were redistributed to large perinuclear ER-derived vesicles when co-expressed with the membrane binding 6K-VPg-Pro protein of TuMV. The association of Hsc70-3 with the RdRp could possibly take place in membrane-derived replication complexes. Thus, Hsc70-3 and PABP2 are potentially integral components of the replicase complex and could have important roles to play in the regulation of potyviral RdRp functions.


Asunto(s)
Arabidopsis/virología , Proteínas del Choque Térmico HSC70/metabolismo , Proteínas de Plantas/metabolismo , ARN Polimerasa Dependiente del ARN/metabolismo , Vesículas Transportadoras/virología , Tymovirus/metabolismo , Proteínas Virales/metabolismo , Secuencia de Aminoácidos , Núcleo Celular/química , Citoplasma/química , Inmunoprecipitación , Microscopía Fluorescente , Datos de Secuencia Molecular , Unión Proteica , Mapeo de Interacción de Proteínas , Nicotiana/virología
17.
J Virol ; 81(20): 10905-13, 2007 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-17670821

RESUMEN

Poly(A) binding protein 2 (PABP2) of Arabidopsis thaliana was previously shown to interact with VPg-Pro of turnip mosaic virus (TuMV) and may consequently play an important role during infection. Subcellular fractionation experiments revealed that PABP2 was predominantly a cytoplasmic soluble protein in healthy plants. However, in TuMV-infected plants, a subpopulation of PABP2 was membrane associated or was localized in the nucleus. Confocal microscopy experiments indicated that PABP2 was partially retargeted to the nucleolus in the presence of TuMV VPg-Pro. In addition, the membrane association of PABP2 during TuMV infection resulted from the internalization of the host protein in 6K-VPg-Pro-induced vesicles, as shown by a combination of confocal microscopy and sucrose gradient fractionation experiments. This redistribution of an important translation initiation factor to the nucleolus and to membrane structure likely underlies two important processes of the TuMV replication cycle.


Asunto(s)
Nucléolo Celular/virología , Enfermedades de las Plantas/virología , Proteína II de Unión a Poli(A)/metabolismo , Tymovirus/patogenicidad , Arabidopsis , Microscopía Confocal , Plantas/ultraestructura , Plantas/virología , Transporte de Proteínas , Tymovirus/metabolismo , Proteínas Virales/metabolismo , Replicación Viral
18.
RNA ; 13(1): 129-37, 2007 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-17095542

RESUMEN

Turnip yellow mosaic virus (TYMV) RNA directs the translation of two overlapping open reading frames. Competing models have been previously published to explain ribosome access to the downstream polyprotein cistron. The Trojan horse model, based on cell-free experiments, proposes noncanonical cap-independent initiation in which the 3'-terminal tRNA-like structure (TLS) functionally replaces initiator tRNA, and the valine bound to the TLS becomes cis-incorporated into viral protein. The initiation coupling model, based on in vivo expression and ribosome toe-printing studies, proposes a variation of canonical leaky scanning. Here, we have re-examined the wheat germ extract experiments that led to the Trojan horse model, incorporating a variety of controls. We report that (1) translation in vitro from the polyprotein AUG of TYMV RNA is unchanged after removal of the 3' TLS but is stimulated by the presence of a 5'-cap; (2) the presence of free cap analog or edeine (which interferes with initiation at the ribosomal P site and its tRNA(i) (Met) involvement) inhibits translation from the polyprotein AUG; (3) the toe-prints of immediately post-initiation ribosomes on TYMV RNA are similar with and without an intact TLS; and (4) significant deacylation of valyl-TYMV RNA in wheat germ extract can complicate the detection of cis-incorporation. These results favor the initiation coupling model.


Asunto(s)
Iniciación de la Cadena Peptídica Traduccional/genética , Poliproteínas/biosíntesis , Caperuzas de ARN/genética , ARN de Transferencia de Metionina/genética , Tymovirus/metabolismo , Proteínas Virales/biosíntesis , Secuencia de Aminoácidos , ADN Viral/metabolismo , Edeína/farmacología , Datos de Secuencia Molecular , Conformación de Ácido Nucleico , Poliproteínas/química , Poliproteínas/genética , Biosíntesis de Proteínas/genética , Ribosomas/efectos de los fármacos , Ribosomas/metabolismo , Semillas/metabolismo , Semillas/virología , Triticum/metabolismo , Triticum/virología , Tymovirus/genética , Valina/análisis , Proteínas Virales/química , Proteínas Virales/genética
19.
Virology ; 356(1-2): 126-35, 2006.
Artículo en Inglés | MEDLINE | ID: mdl-16942786

RESUMEN

We have studied the encapsidation requirements of Turnip yellow mosaic virus (TYMV) genomic and subgenomic RNA using an "agroinfiltration" procedure involving transient expression of RNAs and coat protein (CP) in Nicotiana benthamiana leaves. Although N. benthamiana is a nonhost, expression of TYMV RNA in its leaves by agroinfiltration resulted in efficient local infection and production of the expected virions containing genomic and subgenomic RNAs together with empty capsids. A nonreplicating genomic RNA with a mutation in the polymerase domain was efficiently encapsidated by CP provided in trans, even though RNA levels were a thousand-fold lower than in normal infections. In contrast, encapsidation of CP mRNA was not observed under these conditions, even when the CP mRNA had authentic 5'- and 3'-termini. Deletion of the 3'-tRNA-like structure from the genomic RNA did not alter the encapsidation behavior, suggesting that this feature does not play a role in the encapsidation of TYMV RNA. Our results indicate differences in the encapsidation process between genomic and subgenomic RNAs, and suggest an interaction between RNA replication and the packaging of subgenomic RNA.


Asunto(s)
Proteínas de la Cápside/metabolismo , Genoma Viral , ARN Viral/metabolismo , Tymovirus/metabolismo , Ensamble de Virus , Enfermedades de las Plantas/virología , Hojas de la Planta/virología , ARN Viral/genética , Nicotiana/virología , Tymovirus/genética , Virión/metabolismo , Replicación Viral
20.
J Gen Virol ; 83(Pt 12): 3187-3197, 2002 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-12466497

RESUMEN

Plant viruses move to adjacent cells with the use of virus-encoded cell-to-cell movement proteins. Using proteins produced by in vitro translation, we present evidence that the '69K' movement protein of Turnip yellow mosaic virus (TYMV) is recognized as a substrate for the attachment of polyubiquitin chains and for subsequent rapid and selective proteolysis by the proteasome, the ATP-dependent proteolytic system present in reticulocyte lysate. Truncation of the 69K protein suggests the existence of two degradation signals within its sequence. We propose that selective degradation of virus movement proteins may contribute to the previously reported transient nature of their accumulation during infection.


Asunto(s)
Brassica napus/virología , Tymovirus/metabolismo , Ubiquitina/metabolismo , Proteínas Virales/metabolismo , Animales , Regulación Viral de la Expresión Génica , Enfermedades de las Plantas/virología , Proteínas de Movimiento Viral en Plantas , Virus de Plantas/metabolismo , Virus de Plantas/patogenicidad , Biosíntesis de Proteínas , Conejos , Reticulocitos/metabolismo , Tymovirus/patogenicidad
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