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1.
Methods Mol Biol ; 2833: 109-119, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38949705

RESUMEN

Tuberculosis (TB) is the most common cause of death from an infectious disease. Although treatment has been available for more than 70 years, it still takes too long and many patients default risking relapse and the emergence of resistance. It is known that lipid-rich, phenotypically antibiotic-tolerant, bacteria are more resistant to antibiotics and may be responsible for relapse necessitating extended therapy. Using a microfluidic system that acoustically traps live mycobacteria, M. smegmatis, a model organism for M. tuberculosis we can perform optical analysis in the form of wavelength-modulated Raman spectroscopy (WMRS) on the trapped organisms. This system can allow observations of the mycobacteria for up to 8 h. By adding antibiotics, it is possible to study the effect of antibiotics in real-time by comparing the Raman fingerprints in comparison to the unstressed condition. This microfluidic platform may be used to study any microorganism and to dynamically monitor its response to many conditions including antibiotic stress, and changes in the growth media. This opens the possibility of understanding better the stimuli that trigger the lipid-rich downregulated and phenotypically antibiotic-resistant cell state.


Asunto(s)
Mycobacterium smegmatis , Espectrometría Raman , Espectrometría Raman/métodos , Mycobacterium smegmatis/efectos de los fármacos , Mycobacterium smegmatis/crecimiento & desarrollo , Microfluídica/métodos , Microfluídica/instrumentación , Antibacterianos/farmacología , Acústica/instrumentación , Dispositivos Laboratorio en un Chip , Técnicas Analíticas Microfluídicas/instrumentación , Técnicas Analíticas Microfluídicas/métodos , Humanos
2.
J Biomed Opt ; 29(Suppl 2): S22711, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38952688

RESUMEN

Significance: Biomanufacturing utilizes modified microbial systems to sustainably produce commercially important biomolecules for use in agricultural, energy, food, material, and pharmaceutical industries. However, technological challenges related to non-destructive and high-throughput metabolite screening need to be addressed to fully unlock the potential of synthetic biology and sustainable biomanufacturing. Aim: This perspective outlines current analytical screening tools used in industrial cell strain development programs and introduces label-free vibrational spectro-microscopy as an alternative contrast mechanism. Approach: We provide an overview of the analytical instrumentation currently used in the "test" portion of the design, build, test, and learn cycle of synthetic biology. We then highlight recent progress in Raman scattering and infrared absorption imaging techniques, which have enabled improved molecular specificity and sensitivity. Results: Recent developments in high-resolution chemical imaging methods allow for greater throughput without compromising the image contrast. We provide a roadmap of future work needed to support integration with microfluidics for rapid screening at the single-cell level. Conclusions: Quantifying the net expression of metabolites allows for the identification of cells with metabolic pathways that result in increased biomolecule production, which is essential for improving the yield and reducing the cost of industrial biomanufacturing. Technological advancements in vibrational microscopy instrumentation will greatly benefit biofoundries as a complementary approach for non-destructive cell screening.


Asunto(s)
Espectrometría Raman , Espectrometría Raman/métodos , Vibración , Bacterias/metabolismo , Bacterias/química
3.
Commun Biol ; 7(1): 785, 2024 Jun 29.
Artículo en Inglés | MEDLINE | ID: mdl-38951178

RESUMEN

Accurate, rapid and non-invasive cancer cell phenotyping is a pressing concern across the life sciences, as standard immuno-chemical imaging and omics require extended sample manipulation. Here we combine Raman micro-spectroscopy and phase tomography to achieve label-free morpho-molecular profiling of human colon cancer cells, following the adenoma, carcinoma, and metastasis disease progression, in living and unperturbed conditions. We describe how to decode and interpret quantitative chemical and co-registered morphological cell traits from Raman fingerprint spectra and refractive index tomograms. Our multimodal imaging strategy rapidly distinguishes cancer phenotypes, limiting observations to a low number of pristine cells in culture. This synergistic dataset allows us to study independent or correlated information in spectral and tomographic maps, and how it benefits cell type inference. This method is a valuable asset in biomedical research, particularly when biological material is in short supply, and it holds the potential for non-invasive monitoring of cancer progression in living organisms.


Asunto(s)
Fenotipo , Espectrometría Raman , Humanos , Espectrometría Raman/métodos , Neoplasias del Colon/patología , Neoplasias del Colon/genética , Neoplasias del Colon/diagnóstico por imagen , Neoplasias del Colon/metabolismo , Línea Celular Tumoral
4.
Anal Chim Acta ; 1316: 342864, 2024 Aug 08.
Artículo en Inglés | MEDLINE | ID: mdl-38969411

RESUMEN

BACKGROUND: Nasopharyngeal carcinoma (NPC) is a malignant epithelial carcinoma arising from the nasopharyngeal mucosal lining. Diagnosis of NPC at early stage can improve the outcome of patients and facilitate reduction in cancer mortality. The most significant change between cancer cells and normal cells is the variation of cell nucleus. Therefore, accurately detecting the biochemical changes in nucleus between cancer cells and normal cells has great potential to explore diagnostic molecular markers for NPC. Highly sensitive surface-enhanced Raman scattering (SERS) could reflect the biochemical changes in the process of cell cancerization at the molecular level. However, rapid nuclear targeting SERS detection remains a challenge. RESULTS: A novel and accurate nuclear-targeting SERS detection method based on electroporation was proposed. With the assistance of electric pulses, nuclear-targeting nanoprobes were rapidly introduced into different NPC cells (including CNE1, CNE2, C666 cell lines) and normal nasopharyngeal epithelial cells (NP69 cell line), respectively. Under the action of nuclear localization signaling peptides (NLS), the nanoprobes entering cells were located to the nucleus, providing high-quality nuclear SERS signals. Hematoxylin and eosin (H&E) staining and in situ cell SERS imaging confirmed the excellent nuclear targeting performance of the nanoprobes developed in this study. The comparison of SERS signals indicated that there were subtle differences in the biochemical components between NPC cells and normal nasopharyngeal cells. Furthermore, SERS spectra combined with principal component analysis (PCA) and linear discriminant analysis (LDA) were employed to diagnose and distinguish NPC cell samples, and high sensitivity, specificity, and accuracy were obtained in the screening of NPC cells from normal nasopharyngeal epithelial cells. SIGNIFICANCE: To the best of our knowledge, this is the first study that employing nuclear-targeting SERS testing to screen nasopharyngeal carcinoma cells. Based on the electroporation technology, nanoprobes can be rapidly introduced into living cells for intracellular biochemical detection. Nuclear-targeting SERS detection can analyze the biochemical changes in the nucleus of cancer cells at the molecular level, which has great potential for early cancer screening and cytotoxicity analysis of anticancer drugs.


Asunto(s)
Núcleo Celular , Carcinoma Nasofaríngeo , Neoplasias Nasofaríngeas , Espectrometría Raman , Espectrometría Raman/métodos , Humanos , Carcinoma Nasofaríngeo/diagnóstico , Carcinoma Nasofaríngeo/patología , Carcinoma Nasofaríngeo/metabolismo , Neoplasias Nasofaríngeas/diagnóstico , Neoplasias Nasofaríngeas/patología , Núcleo Celular/química , Núcleo Celular/metabolismo , Línea Celular Tumoral , Propiedades de Superficie , Nanopartículas del Metal/química
5.
Anal Chim Acta ; 1316: 342813, 2024 Aug 08.
Artículo en Inglés | MEDLINE | ID: mdl-38969419

RESUMEN

In the immunoassay process, for fulfilling the need to identify multiple analytes in a small amount of complex sample matrix, it is desirable to develop highly efficient and specific multiplex suspension array technology. Raman coding strategy offers an attractive solution to code the suspension arrays by simply combing narrow spectral bands with stable signal intensities through solid-phase synthesis on the resin beads. Based on this strategy, we report the bead-based spontaneous Raman codes for multiplex immunoassay. The study resulted in superior selectivity of the Raman-encoded beads for binding with single and multiple analytes, respectively. With the use of mixed types of Raman-encoded immunoassay beads, multiple targets in small amounts of samples were identified rapidly and accurately. By confirming the feasibility of bead-based spontaneous Raman codes for multiplex immunoassay, we anticipate this novel technology to be widely applied in the near future.


Asunto(s)
Espectrometría Raman , Espectrometría Raman/métodos , Inmunoensayo/métodos , Humanos
6.
Mikrochim Acta ; 191(8): 441, 2024 07 02.
Artículo en Inglés | MEDLINE | ID: mdl-38954045

RESUMEN

A ratiometric SERS aptasensor based on catalytic hairpin self-assembly (CHA) mediated cyclic signal amplification strategy was developed for the rapid and reliable determination of Escherichia coli O157:H7. The recognition probe was synthesized by modifying magnetic beads with blocked aptamers, and the SERS probe was constructed by functionalizing gold nanoparticles (Au NPs) with hairpin structured DNA and 4-mercaptobenzonitrile (4-MBN). The recognition probe captured E. coli O157:H7 specifically and released the blocker DNA, which activated the CHA reaction on the SERS probe and turned on the SERS signal of 6-carboxyl-x-rhodamine (ROX). Meanwhile, 4-MBN was used as an internal reference to calibrate the matrix interference. Thus, sensitive and reliable determination and quantification of E. coli O157:H7 was established using the ratio of the SERS signal intensities of ROX to 4-MBN. This aptasensor enabled detection of 2.44 × 102 CFU/mL of E. coli O157:H7 in approximately 3 h without pre-culture and DNA extraction. In addition, good reliability and excellent reproducibility were observed for the determination of E. coli O157:H7 in spiked water and milk samples. This study offered a new solution for the design of rapid, sensitive, and reliable SERS aptasensors.


Asunto(s)
Aptámeros de Nucleótidos , Técnicas Biosensibles , Escherichia coli O157 , Oro , Límite de Detección , Nanopartículas del Metal , Leche , Espectrometría Raman , Escherichia coli O157/aislamiento & purificación , Aptámeros de Nucleótidos/química , Nanopartículas del Metal/química , Oro/química , Leche/microbiología , Leche/química , Espectrometría Raman/métodos , Técnicas Biosensibles/métodos , Animales , Catálisis , Secuencias Invertidas Repetidas , Contaminación de Alimentos/análisis , Microbiología del Agua , Reproducibilidad de los Resultados
7.
Mikrochim Acta ; 191(8): 444, 2024 07 03.
Artículo en Inglés | MEDLINE | ID: mdl-38955823

RESUMEN

Transferrin (TRF), recognized as a glycoprotein clinical biomarker and therapeutic target, has its concentration applicable for disease diagnosis and treatment monitoring. Consequently, this study developed boronic acid affinity magnetic surface molecularly imprinted polymers (B-MMIPs) with pH-responsitivity as the "capture probe" for TRF, which have high affinity similar to antibodies, with a dissociation constant of (3.82 ± 0.24) × 10-8 M, showing 7 times of reusability. The self-copolymerized imprinted layer synthesized with dopamine (DA) and 3-Aminophenylboronic acid (APBA) as double monomers avoided nonspecific binding sites and produced excellent adsorption properties. Taking the gold nanostar (AuNS) with a branch tip "hot spot" structure as the core, the silver-coated AuNS functionalized with the biorecognition element 4-mercaptophenylboronic acid (MPBA) was employed as a surface-enhanced Raman scattering (SERS) nanotag (AuNS@Ag-MPBA) to label TRF, thereby constructing a double boronic acid affinity "sandwich" SERS biosensor (B-MMIPs-TRF-SERS nanotag) for the highly sensitive detection of TRF. The SERS biosensor exhibited a detection limit for TRF of 0.004 ng/mL, and its application to spiked serum samples confirmed its reliability and feasibility, demonstrating significant potential for clinical TRF detection. Moreover, the SERS biosensor designed in this study offers advantages in stability, detection speed (40 min), and cost efficiency. The portable Raman instrument for SERS detection fulfills the requirements for point-of-care testing.


Asunto(s)
Técnicas Biosensibles , Ácidos Borónicos , Oro , Espectrometría Raman , Ácidos Borónicos/química , Técnicas Biosensibles/métodos , Oro/química , Humanos , Espectrometría Raman/métodos , Plata/química , Nanopartículas del Metal/química , Límite de Detección , Transferrina/análisis , Transferrina/química , Impresión Molecular , Polímeros Impresos Molecularmente/química , Glicoproteínas/sangre , Glicoproteínas/química , Materiales Biomiméticos/química , Dopamina/sangre , Dopamina/análisis , Compuestos de Sulfhidrilo
8.
Sci Rep ; 14(1): 15056, 2024 07 01.
Artículo en Inglés | MEDLINE | ID: mdl-38956075

RESUMEN

Celiac Disease (CD) is a primary malabsorption syndrome resulting from the interplay of genetic, immune, and dietary factors. CD negatively impacts daily activities and may lead to conditions such as osteoporosis, malignancies in the small intestine, ulcerative jejunitis, and enteritis, ultimately causing severe malnutrition. Therefore, an effective and rapid differentiation between healthy individuals and those with celiac disease is crucial for early diagnosis and treatment. This study utilizes Raman spectroscopy combined with deep learning models to achieve a non-invasive, rapid, and accurate diagnostic method for celiac disease and healthy controls. A total of 59 plasma samples, comprising 29 celiac disease cases and 30 healthy controls, were collected for experimental purposes. Convolutional Neural Network (CNN), Multi-Scale Convolutional Neural Network (MCNN), Residual Network (ResNet), and Deep Residual Shrinkage Network (DRSN) classification models were employed. The accuracy rates for these models were found to be 86.67%, 90.76%, 86.67% and 95.00%, respectively. Comparative validation results revealed that the DRSN model exhibited the best performance, with an AUC value and accuracy of 97.60% and 95%, respectively. This confirms the superiority of Raman spectroscopy combined with deep learning in the diagnosis of celiac disease.


Asunto(s)
Enfermedad Celíaca , Aprendizaje Profundo , Espectrometría Raman , Enfermedad Celíaca/diagnóstico , Enfermedad Celíaca/sangre , Humanos , Espectrometría Raman/métodos , Femenino , Masculino , Adulto , Redes Neurales de la Computación , Estudios de Casos y Controles , Persona de Mediana Edad
9.
Lasers Med Sci ; 39(1): 175, 2024 Jul 06.
Artículo en Inglés | MEDLINE | ID: mdl-38970671

RESUMEN

This study aimed to identify differences in the composition of whole blood of patients with chronic kidney disease (CKD), before and after a hemodialysis session (HDS), and possible differences in blood composition between stages and between genders using Raman spectroscopy and principal component analysis (PCA). Whole blood samples were collected from 40 patients (20 women and 20 men), before and after a HDS. Raman spectra were obtained and the spectra were evaluated by PCA and partial least squares (PLS) regression. Mean spectra and difference spectrum between the groups were calculated: stages Before and After HDS, and gender Women and Men, which had their most intense peaks identified. Stage: mean spectra and difference spectrum indicated positive peaks that could be assigned to red blood cells, hemoglobin and deoxi-hemoglobin in the group Before HDS. There was no statistically significant difference by PCA. Gender: mean spectra and difference spectrum Before HDS indicated positive peaks that could be assigned to red blood cells, hemoglobin and deoxi-hemoglobin with greater intensity in the group Women, and negative peaks to white blood cells and serum, with greater intensity in the group Men. There was statistically significant difference by PCA, which also identified the peaks assigned to white blood cells, serum and porphyrin for Women and red blood cells and amino acids (tryptophan) for Men. PLS model was able to classify the spectra of the gender with 83.7% accuracy considering the classification per patient. The Raman technique highlighted gender differences in pacients with CKD.


Asunto(s)
Análisis de Componente Principal , Diálisis Renal , Insuficiencia Renal Crónica , Espectrometría Raman , Humanos , Masculino , Femenino , Espectrometría Raman/métodos , Insuficiencia Renal Crónica/terapia , Insuficiencia Renal Crónica/sangre , Persona de Mediana Edad , Adulto , Anciano , Hemoglobinas/análisis , Eritrocitos/química , Análisis de los Mínimos Cuadrados
10.
BMC Cancer ; 24(1): 791, 2024 Jul 02.
Artículo en Inglés | MEDLINE | ID: mdl-38956551

RESUMEN

BACKGROUND: Early screening and detection of lung cancer is essential for the diagnosis and prognosis of the disease. In this paper, we investigated the feasibility of serum Raman spectroscopy for rapid lung cancer screening. METHODS: Raman spectra were collected from 45 patients with lung cancer, 45 with benign lung lesions, and 45 healthy volunteers. And then the support vector machine (SVM) algorithm was applied to build a diagnostic model for lung cancer. Furthermore, 15 independent individuals were sampled for external validation, including 5 lung cancer patients, 5 benign lung lesion patients, and 5 healthy controls. RESULTS: The diagnostic sensitivity, specificity, and accuracy were 91.67%, 92.22%, 90.56% (lung cancer vs. healthy control), 92.22%,95.56%,93.33% (benign lung lesion vs. healthy) and 80.00%, 83.33%, 80.83% (lung cancer vs. benign lung lesion), repectively. In the independent validation cohort, our model showed that all the samples were classified correctly. CONCLUSION: Therefore, this study demonstrates that the serum Raman spectroscopy analysis technique combined with the SVM algorithm has great potential for the noninvasive detection of lung cancer.


Asunto(s)
Neoplasias Pulmonares , Espectrometría Raman , Máquina de Vectores de Soporte , Humanos , Neoplasias Pulmonares/sangre , Neoplasias Pulmonares/diagnóstico , Espectrometría Raman/métodos , Estudios de Casos y Controles , Masculino , Femenino , Persona de Mediana Edad , Anciano , Detección Precoz del Cáncer/métodos , Adulto , Sensibilidad y Especificidad , Algoritmos , Biomarcadores de Tumor/sangre
11.
Biosens Bioelectron ; 261: 116488, 2024 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-38905860

RESUMEN

Long-stranded non-coding RNAs (lncRNA) have important roles in disease as transcriptional regulators, mRNA processing regulators and protein synthesis factors. However, traditional methods for detecting lncRNA are time-consuming and labor-intensive, and the functions of lncRNA are still being explored. Here, we present a surface enhanced Raman spectroscopy (SERS) based biosensor for the detection of lncRNA associated with liver cancer (LC) as well as in situ cellular imaging. Using the dual SERS probes, quantitative detection of lncRNA (DAPK1-215) can be achieved with an ultra-low detection limit of 952 aM by the target-triggered assembly of core-satellite nanostructures. And the reliability of this assay can be further improved with the R2 value of 0.9923 by an internal standard probe that enables the signal dynamic calibration. Meanwhile, the high expression of DAPK1-215 mainly distributed in the cytoplasm was observed in LC cells compared with the normal ones using the SERS imaging method. Moreover, results of cellular function assays showed that DAPK1-215 promoted the migration and invasion of LC by significantly reducing the expression of the structural domain of death associated protein kinase. The development of this biosensor based on SERS can provide a sensitive and specific method for exploring the expression of lncRNA that would be a potential biomarker for the screening of LC.


Asunto(s)
Neoplasias Hepáticas , Nanoestructuras , ARN Largo no Codificante , Espectrometría Raman , Humanos , ARN Largo no Codificante/genética , ARN Largo no Codificante/química , Espectrometría Raman/métodos , Neoplasias Hepáticas/genética , Neoplasias Hepáticas/patología , Nanoestructuras/química , Técnicas Biosensibles/métodos , Resonancia por Plasmón de Superficie/métodos , Línea Celular Tumoral , Límite de Detección , Oro/química
12.
Biosens Bioelectron ; 261: 116523, 2024 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-38924813

RESUMEN

The quest to reduce kidney transplant rejection has emphasized the urgent requirement for the development of non-invasive, precise diagnostic technologies. These technologies aim to detect antibody-mediated rejection (ABMR) and T-cell-mediated rejection (TCMR), which are asymptomatic and pose a risk of potential kidney damage. The protocols for managing rejection caused by ABMR and TCMR differ, and diagnosis has traditionally relied on invasive biopsy procedures. Therefore, a convergence system using a nano-sensing chip, Raman spectroscopy, and AI technology was introduced to facilitate diagnosis using serum samples obtained from patients with no major abnormality, ABMR, and TCMR after kidney transplantation. Tissue biopsy and Banff score analysis were performed across the groups for validation, and 5 µL of serum obtained at the same time was added onto the Au-ZnO nanorod-based Surface-Enhanced Raman Scattering sensing chip to obtain Raman spectroscopy signals. The accuracy of machine learning algorithms for principal component-linear discriminant analysis and principal component-partial least squares discriminant analysis was 93.53% and 98.82%, respectively. The collagen (an indicative of kidney injury), creatinine, and amino acid-derived signals (markers of kidney function) contributed to this accuracy; however, the high accuracy was primarily due to the ability of the system to analyze a broad spectrum of various biomarkers.


Asunto(s)
Rechazo de Injerto , Trasplante de Riñón , Aprendizaje Automático , Espectrometría Raman , Humanos , Espectrometría Raman/métodos , Rechazo de Injerto/sangre , Rechazo de Injerto/diagnóstico , Rechazo de Injerto/clasificación , Técnicas Biosensibles/métodos , Nanotubos/química , Masculino , Oro/química , Biomarcadores/sangre , Persona de Mediana Edad , Femenino , Adulto
13.
STAR Protoc ; 5(2): 103104, 2024 Jun 21.
Artículo en Inglés | MEDLINE | ID: mdl-38861383

RESUMEN

Approaches for detecting micro(nano)plastics (MNPs) released from intravenous infusion products (IVIPs) are vital for evaluating the safety of both IVIPs and their derived MNPs on human health, yet current understanding is limited. Here, we present a protocol for detecting polyvinyl chloride (PVC) MNPs by combining Raman spectroscopy, scanning electron microscopy equipped with energy-dispersive X-ray spectroscopy (SEM-EDS), and pyrolysis-gas chromatography-mass spectrometry (Py-GC-MS). We describe steps for collecting, pretreating, and measuring PVC MNPs released from IVIPs. For complete details on the use and execution of this protocol, please refer to Li et al.1.


Asunto(s)
Espectrometría Raman , Espectrometría Raman/métodos , Infusiones Intravenosas , Cromatografía de Gases y Espectrometría de Masas/métodos , Cloruro de Polivinilo/química , Humanos , Microscopía Electrónica de Rastreo/métodos , Espectrometría por Rayos X/métodos , Plásticos/química
14.
Anal Chem ; 96(25): 10373-10379, 2024 Jun 25.
Artículo en Inglés | MEDLINE | ID: mdl-38865715

RESUMEN

Spatially offset Raman spectroscopy (SORS) enhanced the capabilities of Raman spectroscopy for the depth-resolved analysis of biological and diffusely scattering samples. This technique offers selective probing of subsurface layers, providing molecular insights without invasive procedures. While SORS has found application in biomedical research, up to now, studies have focused mainly on the detection of mineralization of bones and tissues. Herein, for the first time, SORS is used to assess the soft, organic tissue beneath the skin's surface. In this study, we demonstrate the diagnostic utility of a hand-held SORS device for evaluating the chemical composition of the adipose tissue. We compared perigonadal white adipose tissue (gWAT) in a murine model of atherosclerosis, heart failure, and high-fat diet (HFD) induced obesity. Our results reveal distinct chemical differences in gWAT between HFD-fed and control mice, showcasing the potential of SORS for intravital adipose tissue phenotype characterization. Furthermore, our findings underscore the effectiveness of SORS as a valuable tool for noninvasive assessment of the adipose tissue composition, holding potential diagnostic significance for metabolic disorders.


Asunto(s)
Tejido Adiposo , Dieta Alta en Grasa , Ratones Endogámicos C57BL , Espectrometría Raman , Espectrometría Raman/métodos , Animales , Ratones , Tejido Adiposo/metabolismo , Obesidad/metabolismo , Masculino , Aterosclerosis/metabolismo , Tejido Adiposo Blanco/metabolismo
15.
Mikrochim Acta ; 191(7): 415, 2024 06 22.
Artículo en Inglés | MEDLINE | ID: mdl-38907752

RESUMEN

A novel approach is proposed leveraging surface-enhanced Raman spectroscopy (SERS) combined with machine learning (ML) techniques, principal component analysis (PCA)-centroid displacement-based nearest neighbor (CDNN). This label-free approach can identify slight abnormalities between SERS spectra of gastric lesions at different stages, offering a promising avenue for detection and prevention of precancerous lesion of gastric cancer (PLGC). The agaric-shaped nanoarray substrate was prepared using gas-liquid interface self-assembly and reactive ion etching (RIE) technology to measure SERS spectra of serum from mice model with gastric lesions at different stages, and then a SERS spectral recognition model was trained and constructed using the PCA-CDNN algorithm. The results showed that the agaric-shaped nanoarray substrate has good uniformity, stability, cleanliness, and SERS enhancement effect. The trained PCA-CDNN model not only found the most important features of PLGC, but also achieved satisfactory classification results with accuracy, area under curve (AUC), sensitivity, and specificity up to 100%. This demonstrated the enormous potential of this analysis platform in the diagnosis of PLGC.


Asunto(s)
Aprendizaje Automático , Lesiones Precancerosas , Espectrometría Raman , Neoplasias Gástricas , Neoplasias Gástricas/diagnóstico , Espectrometría Raman/métodos , Animales , Lesiones Precancerosas/diagnóstico , Lesiones Precancerosas/sangre , Ratones , Análisis de Componente Principal
16.
Biosens Bioelectron ; 261: 116475, 2024 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-38852324

RESUMEN

Rapid and accurate identification of tumor boundaries is critical for the cure of glioma, but it is difficult due to the invasive nature of glioma cells. This paper aimed to explore a rapid diagnostic strategy based on a label-free surface-enhanced Raman scattering (SERS) technique for the quantitative detection of glioma cell proportion intraoperatively. With silver nanoparticles as substrate, an in-depth SERS analysis was performed on simulated clinical samples containing normal brain tissue and different concentrations of patient-derived glioma cells. The results revealed two universal characteristic peaks of 655 and 717 cm-1, which strongly correlated with glioma cell proportion regardless of individual differences. Based on the intensity ratio of the two peaks, a ratiometric SERS strategy for the quantification of glioma cells was established by employing an artificial neuron network model and a polynomial regression model. Such a strategy accurately estimated the proportion of glioma cells in simulated clinical samples (R2 = 0.98) and frozen samples (R2 = 0.85). More importantly, it accurately facilitated the delineation of tumor margins in freshly obtained samples. Taken together, this SERS-based method ensured a rapid and more detailed identification of tumor margins during surgical resection, which could be beneficial for intraoperative decision-making and pathological evaluation.


Asunto(s)
Neoplasias Encefálicas , Glioma , Nanopartículas del Metal , Plata , Espectrometría Raman , Glioma/cirugía , Glioma/patología , Glioma/diagnóstico por imagen , Humanos , Espectrometría Raman/métodos , Nanopartículas del Metal/química , Neoplasias Encefálicas/cirugía , Neoplasias Encefálicas/patología , Neoplasias Encefálicas/diagnóstico por imagen , Plata/química , Técnicas Biosensibles/métodos
17.
Nat Commun ; 15(1): 5386, 2024 Jun 25.
Artículo en Inglés | MEDLINE | ID: mdl-38918386

RESUMEN

Aberrantly accumulated metabolites elicit intra- and inter-cellular pro-oncogenic cascades, yet current measurement methods require sample perturbation/disruption and lack spatio-temporal resolution, limiting our ability to fully characterize their function and distribution. Here, we show that Raman spectroscopy (RS) can directly detect fumarate in living cells in vivo and animal tissues ex vivo, and that RS can distinguish between Fumarate hydratase (Fh1)-deficient and Fh1-proficient cells based on fumarate concentration. Moreover, RS reveals the spatial compartmentalization of fumarate within cellular organelles in Fh1-deficient cells: consistent with disruptive methods, we observe the highest fumarate concentration (37 ± 19 mM) in mitochondria, where the TCA cycle operates, followed by the cytoplasm (24 ± 13 mM) and then the nucleus (9 ± 6 mM). Finally, we apply RS to tissues from an inducible mouse model of FH loss in the kidney, demonstrating RS can classify FH status. These results suggest RS could be adopted as a valuable tool for small molecule metabolic imaging, enabling in situ non-destructive evaluation of fumarate compartmentalization.


Asunto(s)
Fumarato Hidratasa , Fumaratos , Espectrometría Raman , Espectrometría Raman/métodos , Animales , Fumaratos/metabolismo , Ratones , Fumarato Hidratasa/metabolismo , Fumarato Hidratasa/genética , Riñón/metabolismo , Mitocondrias/metabolismo , Humanos , Núcleo Celular/metabolismo , Citoplasma/metabolismo
18.
Int J Nanomedicine ; 19: 6281-6293, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38919772

RESUMEN

Introduction: Insulin and C-peptide played crucial roles as clinical indicators for diabetes and certain liver diseases. However, there has been limited research on the simultaneous detection of insulin and C-peptide in trace serum. It is necessary to develop a novel method with high sensitivity and specificity for detecting insulin and C-peptide simultaneously. Methods: A core-shell-satellites hierarchical structured nanocomposite was fabricated as SERS biosensor using a simple wet-chemical method, employing 4-MBA and DTNB for recognition and antibodies for specific capture. Gold nanorods (Au NRs) were modified with Raman reporter molecules and silver nanoparticles (Ag NPs), creating SERS tags with high sensitivity for detecting insulin and C-peptide. Antibody-modified commercial carboxylated magnetic bead@antibody served as the capture probes. Target materials were captured by probes and combined with SERS tags, forming a "sandwich" composite structure for subsequent detection. Results: Under optimized conditions, the nanocomposite fabricated could be used to detect simultaneously for insulin and C-peptide with the detection limit of 4.29 × 10-5 pM and 1.76 × 10-10 nM in serum. The insulin concentration (4.29 × 10-5-4.29 pM) showed a strong linear correlation with the SERS intensity at 1075 cm-1, with high recoveries (96.4-105.3%) and low RSD (0.8%-10.0%) in detecting human serum samples. Meanwhile, the C-peptide concentration (1.76 × 10-10-1.76 × 10-3 nM) also showed a specific linear correlation with the SERS intensity at 1333 cm-1, with recoveries 85.4%-105.0% and RSD 1.7%-10.8%. Conclusion: This breakthrough provided a novel, sensitive, convenient and stable approach for clinical diagnosis of diabetes and certain liver diseases. Overall, our findings presented a significant contribution to the field of biomedical research, opening up new possibilities for improved diagnosis and monitoring of diabetes and liver diseases.


Asunto(s)
Técnicas Biosensibles , Péptido C , Oro , Insulina , Límite de Detección , Nanopartículas del Metal , Dióxido de Silicio , Plata , Espectrometría Raman , Plata/química , Oro/química , Insulina/sangre , Humanos , Espectrometría Raman/métodos , Nanopartículas del Metal/química , Péptido C/sangre , Dióxido de Silicio/química , Técnicas Biosensibles/métodos , Nanotubos/química , Nanocompuestos/química
19.
Nanoscale ; 16(25): 11879-11913, 2024 Jun 27.
Artículo en Inglés | MEDLINE | ID: mdl-38845582

RESUMEN

Brain disorders, including neurodegenerative diseases (NDs) and traumatic brain injury (TBI), present significant challenges in early diagnosis and intervention. Conventional imaging modalities, while valuable, lack the molecular specificity necessary for precise disease characterization. Compared to the study of conventional brain tissues, liquid biopsy, which focuses on blood, tear, saliva, and cerebrospinal fluid (CSF), also unveils a myriad of underlying molecular processes, providing abundant predictive clinical information. In addition, liquid biopsy is minimally- to non-invasive, and highly repeatable, offering the potential for continuous monitoring. Raman spectroscopy (RS), with its ability to provide rich molecular information and cost-effectiveness, holds great potential for transformative advancements in early detection and understanding the biochemical changes associated with NDs and TBI. Recent developments in Raman enhancement technologies and advanced data analysis methods have enhanced the applicability of RS in probing the intricate molecular signatures within biological fluids, offering new insights into disease pathology. This review explores the growing role of RS as a promising and emerging tool for disease diagnosis in brain disorders, particularly through the analysis of liquid biopsy. It discusses the current landscape and future prospects of RS in the diagnosis of brain disorders, highlighting its potential as a non-invasive and molecularly specific diagnostic tool.


Asunto(s)
Espectrometría Raman , Espectrometría Raman/métodos , Humanos , Biopsia Líquida/métodos , Encefalopatías/diagnóstico , Encefalopatías/patología , Lesiones Traumáticas del Encéfalo/diagnóstico , Lesiones Traumáticas del Encéfalo/patología , Lesiones Traumáticas del Encéfalo/metabolismo , Lesiones Traumáticas del Encéfalo/diagnóstico por imagen , Enfermedades Neurodegenerativas/diagnóstico , Enfermedades Neurodegenerativas/metabolismo , Encéfalo/patología , Encéfalo/metabolismo , Encéfalo/diagnóstico por imagen
20.
Nano Lett ; 24(25): 7792-7799, 2024 Jun 26.
Artículo en Inglés | MEDLINE | ID: mdl-38860501

RESUMEN

Disease biomarkers in tears are crucial for clinical diagnosis and health monitoring. However, the limited volume of tear samples, low concentration of tear biomarkers, and complex tear composition present challenges for precise testing. We introduce a spot-on testing platform of metal-organic framework (MOF)-based surface-enhanced Raman scattering (SERS) capillary column, which is capable of target molecules selective separation and enrichment for tear biomarkers in situ detection. It consists of Au nanostars for effective SERS signal and a porous MOF shell for separating impurities through molecular sieving effect. This platform allows for simultaneous collection and detection of tear, capturing the disease biomarker malondialdehyde in tears with a 9.38 × 10-9 mol/L limit of detection. Moreover, we designed a hand-held device based on this tubular SERS sensor, successfully diagnosing patients with dry eye disease. This functional capillary column enables noninvasive and rapid diagnosis of biomarkers in biofluids, providing potential for disease diagnosis and healthcare monitoring.


Asunto(s)
Biomarcadores , Oro , Malondialdehído , Estructuras Metalorgánicas , Espectrometría Raman , Lágrimas , Espectrometría Raman/métodos , Lágrimas/química , Estructuras Metalorgánicas/química , Humanos , Malondialdehído/análisis , Oro/química , Biomarcadores/análisis , Síndromes de Ojo Seco/diagnóstico , Límite de Detección , Nanopartículas del Metal/química
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