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1.
Diagnostics (Basel) ; 14(9)2024 May 05.
Article in English | MEDLINE | ID: mdl-38732377

ABSTRACT

Cutaneous Leishmaniasis (CL) is a major global health problem requiring appropriate diagnosis methods. Its diagnosis is challenging, particularly in resource-limited settings. The integration of Artificial Intelligence (AI) into medical diagnostics has shown promising results in various fields, including dermatology. In this systematic review, we aim to highlight the value of using AI for CL diagnosis and the AI-based algorithms that are employed in this process, and to identify gaps that need to be addressed. Our work highlights that only a limited number of studies are related to using AI algorithms for CL diagnosis. Among these studies, seven gaps were identified for future research. Addressing these considerations will pave the way for the development of robust AI systems and encourage more research in CL detection by AI. This could contribute to improving CL diagnosis and, ultimately, healthcare outcomes in CL-endemic regions.

2.
Microb Genom ; 10(4)2024 Apr.
Article in English | MEDLINE | ID: mdl-38578294

ABSTRACT

In Morocco, cutaneous leishmaniasis (CL) caused by Leishmania (L.) tropica is an important health problem. Despite the high incidence of CL in the country, the genomic heterogeneity of these parasites is still incompletely understood. In this study, we sequenced the genomes of 14 Moroccan isolates of L. tropica collected from confirmed cases of CL to investigate their genomic heterogeneity. Comparative genomics analyses were conducted by applying the recently established Genome Instability Pipeline (GIP), which allowed us to conduct phylogenomic and principal components analyses (PCA), and to assess genomic variations at the levels of the karyotype, gene copy number, single nucleotide polymorphisms (SNPs) and small insertions/deletions (INDELs) variants. Read-depth analyses revealed a mostly disomic karyotype, with the exception of the stable tetrasomy of chromosome 31. In contrast, we identified important gene copy number variations across all isolates, which affect known virulence genes and thus were probably selected in the field. SNP-based cluster analysis of the 14 isolates revealed a core group of 12 strains that formed a tight cluster and shared 45.1 % (87 751) of SNPs, as well as two strains (M3015, Ltr_16) that clustered separately from each other and the core group, suggesting the circulation of genetically highly diverse strains in Morocco. Phylogenetic analysis, which compared our 14 L. tropica isolates against 40 published genomes of L. tropica from a diverse array of locations, confirmed the genetic difference of our Moroccan isolates from all other isolates examined. In conclusion, our results indicate potential regional variations in SNP profiles that may differentiate Moroccan L. tropica from other L. tropica strains circulating in endemic countries in the Middle East. Our report paves the way for future research with a larger number of strains that will allow correlation of diverse phenotypes (resistance to treatments, virulence) and origins (geography, host species, year of isolation) to defined genomic signals such as gene copy number variations or SNP profiles that may represent interesting biomarker candidates.


Subject(s)
Leishmania tropica , Leishmaniasis, Cutaneous , Humans , Leishmania tropica/genetics , Phylogeny , DNA Copy Number Variations , Morocco/epidemiology , Leishmaniasis, Cutaneous/epidemiology , Leishmaniasis, Cutaneous/parasitology , Genomics
3.
Acad Radiol ; 16(7): 890-6, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19297209

ABSTRACT

RATIONALE AND OBJECTIVES: (1)H-magnetic resonance spectroscopy ((1)H-MRS) has proved to be the sole in vivo technique able to measure intramyocellular lipids (IMCL) in both humans and animals. Mouse models are now widely used for physiologic studies and drug discovery. However, IMCL assessment using (1)H-MRS is hindered in this animal model by the small muscle size and strong contamination from the extramyocellular lipid (EMCL) signal. The objective of this study was to the use of (1)H-MRS for IMCL quantification in mice at different ages. MATERIALS AND METHODS: Noninvasive IMCL quantification was performed at 7 T in tibialis anterior (TA) muscles of healthy male C57/BL6 mice (n = 9; age, 13.6 +/- 1 months), db/db mice (n = 4), and their C57BL/KSJ control littermates (n = 4) at 7 and 17 weeks of age. RESULTS: The IMCL content of diabetic mice TA was significantly higher than their littermates (2.41 +/- 0.5 vs. 1.21 +/- 0.35, P < .01). An age effect was observed, with TA IMCL levels being lower in older than younger control mice, but increasing between 7 and 17 weeks in the db/db mice. CONCLUSIONS: The feasibility of (1)H-MRS spectroscopy was demonstrated in mice muscle, despite its small size, and used to assess IMCL content in db/db mice.


Subject(s)
Aging/metabolism , Diabetes Mellitus/metabolism , Hindlimb/metabolism , Lipids/analysis , Magnetic Resonance Spectroscopy/methods , Muscle, Skeletal/metabolism , Animals , Male , Mice , Mice, Inbred C57BL , Protons
4.
NMR Biomed ; 20(3): 383-91, 2007 May.
Article in English | MEDLINE | ID: mdl-17451167

ABSTRACT

Spatial and temporal variations in oxygen partial pressure (pO(2)) during breath-hold can be exploited to obtain important regional parameters of lung function. In the course of apnea, the oxygen concentration is known to decay exponentially. Therefore, the initial pO(2) (p(0)) can be used to represent local ventilation, and the oxygen depletion time constant can characterize perfusion. The protocol, based on a nonlinear model of pO(2) decay, was validated in six healthy mice. Parametric maps of p(0) and oxygen depletion time constant were obtained for pure (3)He and (3)He/air mixture. The mean measured values of p(0) were 77 +/- 9 mbar for the pure (3)He insufflation and 107 +/- 5 mbar for (3)He/air mixture, in agreement with the predefined p(0) values: 75 +/- 15 mbar and 123 +/- 15 mbar, respectively. The mean measured oxygen depletion time constants were 6.5 +/- 0.2 s for pure (3)He and 7.1 +/- 0.8 s for the (3)He/air mixture, in agreement with physiology.


Subject(s)
Helium , Lung/metabolism , Magnetic Resonance Imaging , Oxygen/analysis , Oxygen/metabolism , Animals , Computer Simulation , Female , Mice , Mice, Inbred C57BL , Partial Pressure , Time Factors
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