ABSTRACT
Mal secco is a vascular disease of citrus caused by the mitosporic fungus Plenodomus tracheiphilus. Soil containing infected plant material constitutes an inoculum source for root infections. In this study, the soil bacterial and fungal communities of five lemon orchards located in Syracuse Province (Sicily, Italy) affected by mal secco were analyzed. Soil samples were collected under lemon tree canopies and subjected to total genomic DNA extraction. The fungal DNA was detected through qPCR in all orchards, with variable concentrations. Bacterial and fungal communities were profiled using 16S and ITS amplicon-based high-throughput sequencing, respectively. According to our results, the relative abundances of the most represented bacterial phyla (e.g., Proteobacteria, Actinobacteriota, Acidobacteriota) changed across the orchards, while in the fungal community, the phylum Ascomycota was dominant, with Basidiomycota and Mortierellomycota abundances fluctuating. On the whole, ß diversity analysis showed significant variation in the composition of the soil microbial communities across the orchards. This result was confirmed by the analysis of the core community (taxa present at ≥ 75% of total samples), where putative beneficial bacteria resulted in significantly enriched fungus-infected soil samples, suggesting complex microbial interactions. Our findings shed light on the composition and diversity of the soil microbiome in lemon orchards with the occurrence of mal secco infections.
Subject(s)
Citrus , Microbiota , Plant Diseases , Soil Microbiology , Citrus/microbiology , Plant Diseases/microbiology , Microbiota/genetics , Bacteria/genetics , Bacteria/classification , Bacteria/isolation & purification , Fungi/genetics , Fungi/classification , Fungi/isolation & purification , Ascomycota/genetics , Ascomycota/pathogenicityABSTRACT
In this study, we investigated the biocontrol activity of the P. mediterranea strain PVCT 3C against Mal secco, a severe disease of citrus caused by the vascular fungus Plenodomus tracheiphilus. In vitro, bacterial diffusible compounds, volatile organic compounds and culture filtrates produced by PVCT 3C reduced the mycelial growth and conidial germination of P. tracheiphilus, also affecting the mycelial pigmentation. The application of bacterial suspensions by leaf-spraying before the inoculation with the pathogen on plants of the highly susceptible species sour orange and lemon led to an overall reduction in incidence and disease index, above all during the early disease stage. PVCT 3C genome was subjected to whole-genome shotgun sequencing to study the molecular mechanisms of action of this strain. In silico annotation of biosynthetic gene clusters for secondary metabolites revealed the presence of numerous clusters encoding antimicrobial compounds (e.g. cyclic lipopeptides, hydrogen cyanide, siderophores) and candidate novel products. During the asymptomatic disease phase (seven days post-inoculation), bacterial treatments interfered with the expression of different fungal genes, as assessed with an NGS and de novo assembly RNA-seq approach. These results suggest that P. mediterranea PVCT 3C or its secondary metabolites may offer a potential effective and sustainable alternative to contain P. tracheiphilus infections via integrated management.
Subject(s)
Ascomycota , Citrus , Plant Diseases , Pseudomonas , Plant Diseases/microbiology , Plant Diseases/prevention & control , Citrus/microbiology , Ascomycota/genetics , Ascomycota/physiology , Ascomycota/growth & development , Pseudomonas/genetics , Pseudomonas/metabolism , Pseudomonas/physiology , Spores, Fungal/growth & development , Biological Control Agents , Volatile Organic Compounds/metabolism , Volatile Organic Compounds/pharmacology , Antibiosis , Genome, Bacterial , Plant Leaves/microbiology , Mycelium/growth & development , Secondary MetabolismABSTRACT
Here, we report the draft genome sequence of Xanthomonas arboricola pv. pruni strain PVCT 262.1, isolated from almond (Prunus dulcis) leaves affected by bacterial spots in Italy in 2020. Genome size is 5,076,418 bp and G+C content is 65.44%. A total of 4,096 protein-coding genes and 92 RNAs are predicted.
ABSTRACT
Abstract Objective To propose a brief parenting program offered in the context of health promotion and evaluate the immediate results relating to use of appropriate parenting practices and quality of parent-child interaction. Methods Forty-five parents of school-age children from two non-governmental institutions located in a medium-sized city in the state of Sao Paulo participated in the study. The following assessment tools were used in the pre and post-tests: the Child Behavior Checklist (CBCL), Quality of Family Interaction Scales (EQIFs), and the Brazilian Economic Classification Criteria (CCEB). Only scores of parents who attended 75% of the program were included in the analysis (25 participants). Results Most of the participants who completed the program were grouped in socioeconomic levels B and C (72%) and the complaints reported in the pre-test centered on disobedience and stubbornness (29.6%, each). Regarding parents' perceptions of their educational practices and interaction with the children, improvements were detected in several of the aspects measured: affective relationship, involvement, model, communication, rules and monitoring, and children's feelings, besides reduction in use of physical punishment and negative marital atmosphere (p < 0.03). Reductions were detected in aggressive behavior (p = 0.02) and externalizing problems (p = 0.04). Conclusion Despite the small sample and application in a specific community, this quick and affordable intervention seems to have yielded improvements in parent's monitoring and their affective relationships with their children, in addition to reductions in punishments and children's aggressive behavior, contributing to better parent-child interaction in the community.