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1.
Sci Rep ; 14(1): 21598, 2024 09 16.
Article in English | MEDLINE | ID: mdl-39285243

ABSTRACT

Dynamic changes in maternal‒zygotic transition (MZT) require complex regulation of zygote formation, maternal transcript decay, embryonic genome activation (EGA), and cell cycle progression. Although these changes are well described, some key regulatory factors are still elusive. Sirtuin-1 (SIRT1), an NAD+-dependent histone deacetylase, is a versatile driver of MZT via its epigenetic and nonepigenetic substrates. This study focused on the dynamics of SIRT1 in early embryos and its contribution to MZT. A conditional SIRT1-deficient knockout mouse model was used, accompanied by porcine and human embryos. Embryos across mammalian species showed the prominent localization of SIRT1 in the nucleus throughout early embryonic development. Accordingly, SIRT1 interacts with histone H4 on lysine K16 (H4K16) in both mouse and human blastocysts. While maternal SIRT1 is dispensable for MZT, at least one allele of embryonic Sirt1 is required for early embryonic development around the time of EGA. This role of SIRT1 is surprisingly mediated via a transcription-independent mode of action.


Subject(s)
Embryonic Development , Mice, Knockout , Sirtuin 1 , Zygote , Sirtuin 1/metabolism , Sirtuin 1/genetics , Animals , Zygote/metabolism , Humans , Mice , Embryonic Development/genetics , Female , Histones/metabolism , Gene Expression Regulation, Developmental , Blastocyst/metabolism , Swine , Embryo, Mammalian/metabolism
2.
Development ; 151(17)2024 Sep 01.
Article in English | MEDLINE | ID: mdl-39250534

ABSTRACT

During the first week of development, human embryos form a blastocyst composed of an inner cell mass and trophectoderm (TE) cells, the latter of which are progenitors of placental trophoblast. Here, we investigated the expression of transcripts in the human TE from early to late blastocyst stages. We identified enrichment of the transcription factors GATA2, GATA3, TFAP2C and KLF5 and characterised their protein expression dynamics across TE development. By inducible overexpression and mRNA transfection, we determined that these factors, together with MYC, are sufficient to establish induced trophoblast stem cells (iTSCs) from primed human embryonic stem cells. These iTSCs self-renew and recapitulate morphological characteristics, gene expression profiles, and directed differentiation potential, similar to existing human TSCs. Systematic omission of each, or combinations of factors, revealed the crucial importance of GATA2 and GATA3 for iTSC transdifferentiation. Altogether, these findings provide insights into the transcription factor network that may be operational in the human TE and broaden the methods for establishing cellular models of early human placental progenitor cells, which may be useful in the future to model placental-associated diseases.


Subject(s)
Cell Transdifferentiation , Transcription Factors , Trophoblasts , Humans , Trophoblasts/cytology , Trophoblasts/metabolism , Transcription Factors/metabolism , Transcription Factors/genetics , GATA3 Transcription Factor/metabolism , GATA3 Transcription Factor/genetics , GATA2 Transcription Factor/metabolism , GATA2 Transcription Factor/genetics , Female , Gene Expression Regulation, Developmental , Human Embryonic Stem Cells/metabolism , Human Embryonic Stem Cells/cytology , Transcription Factor AP-2/metabolism , Transcription Factor AP-2/genetics , Blastocyst/metabolism , Blastocyst/cytology , Pregnancy , Cell Differentiation
3.
Reprod Fertil Dev ; 362024 Sep.
Article in English | MEDLINE | ID: mdl-39265060

ABSTRACT

Context Sires differ in their ability to produce viable blastocysts, yet our understanding of the cellular mechanisms regulated by the sire during early embryo development is limited. Aims The first aim was to characterise autophagy and reactive oxygen species (ROS) in embryos produced by high and low performing sires under normal and stress culture conditions. The second aim was to evaluate DNA damage and lipid peroxidation as mechanisms that may be impacted by increased cellular stress, specifically oxidative stress. Methods Embryos were produced using four high and four low performing sires based on their ability to produce embryos. Autophagy and ROS were measured throughout development. To evaluate oxidative stress response, autophagy, and ROS were measured in 2-6 cell embryos exposed to heat stress. To understand how cellular stress impacts development, DNA damage and lipid peroxidation were assessed. Key results Under normal conditions, embryos from low performing sires had increased ROS and autophagy. Under heat stress, embryos from low performing sires had increased ROS, yet those from high performing sires had increased autophagy. There was no difference in DNA damage or lipid peroxidation. Conclusions Results suggest that embryos from low performing sires may begin development under increased cellular stress, and autophagy potentially increases to mitigate the impacts of stress. Implications There is potential for improving embryonic competence through selection of sires with lower stress-related markers.


Subject(s)
Autophagy , DNA Damage , Embryonic Development , Lipid Peroxidation , Oxidative Stress , Reactive Oxygen Species , Animals , Cattle , Reactive Oxygen Species/metabolism , Oxidative Stress/physiology , Lipid Peroxidation/physiology , Autophagy/physiology , Embryonic Development/physiology , Female , Male , Blastocyst/metabolism , Embryo Culture Techniques/veterinary , Fertilization in Vitro/veterinary , Pregnancy , Stress, Physiological/physiology
4.
Reprod Fertil Dev ; 362024 Sep.
Article in English | MEDLINE | ID: mdl-39270059

ABSTRACT

Context In vitro embryo production in pigs is an important tool for advancing biomedical research. Intracytoplasmic sperm injection (ICSI) circumvents the polyspermy problems associated with conventional IVF in porcine. However, the suboptimal efficiency for ICSI in pigs requires new strategies to increase blastocyst formation rates. Aim To investigate novel methods for assisted activation using the zinc chelator 1,10-phenanthroline (PHEN), and to improve embryo developmental competence and quality of ICSI porcine blastocyst. Methods ICSI embryos were treated with PHEN after or before sperm injection, recording pronuclear formation, blastocyst rate and the expression of SMARCA4, OCT4, SOX2 and CDX2. Key results Neither electrical nor PHEN significantly improves pronuclear formation rates before or after ICSI. Following in vitro culture to the blastocyst stage, no significant differences were observed in developmental rates among the groups. Moreover, the use of PHEN did not alter the total cell number or the expression of OCT4, SOX2 and CDX2 in pig ICSI blastocysts. Conclusions Assisted oocyte activation with PHEN does not affect the preimplantation development of ICSI-derived pig embryos. Implications These results hold significance in refining and advancing the application of assisted oocyte activation techniques. They offer insights into addressing fertility issues and propelling advancements in human and animal reproductive medicine.


Subject(s)
Chelating Agents , Embryonic Development , Oocytes , Phenanthrolines , Sperm Injections, Intracytoplasmic , Animals , Sperm Injections, Intracytoplasmic/veterinary , Sperm Injections, Intracytoplasmic/methods , Swine , Oocytes/drug effects , Oocytes/metabolism , Phenanthrolines/pharmacology , Female , Chelating Agents/pharmacology , Embryonic Development/drug effects , Blastocyst/drug effects , Blastocyst/metabolism , Zinc/pharmacology , Embryo Culture Techniques/veterinary , Male
5.
Nature ; 633(8030): 686-694, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39198647

ABSTRACT

Faithful DNA replication is essential for genome integrity1-4. Under-replicated DNA leads to defects in chromosome segregation, which are common during embryogenesis5-8. However, the regulation of DNA replication remains poorly understood in early mammalian embryos. Here we constructed a single-cell genome-wide DNA replication atlas of pre-implantation mouse embryos and identified an abrupt replication program switch accompanied by a transient period of genomic instability. In 1- and 2-cell embryos, we observed the complete absence of a replication timing program, and the entire genome replicated gradually and uniformly using extremely slow-moving replication forks. In 4-cell embryos, a somatic-cell-like replication timing program commenced abruptly. However, the fork speed was still slow, S phase was extended, and markers of replication stress, DNA damage and repair increased. This was followed by an increase in break-type chromosome segregation errors specifically during the 4-to-8-cell division with breakpoints enriched in late-replicating regions. These errors were rescued by nucleoside supplementation, which accelerated fork speed and reduced the replication stress. By the 8-cell stage, forks gained speed, S phase was no longer extended and chromosome aberrations decreased. Thus, a transient period of genomic instability exists during normal mouse development, preceded by an S phase lacking coordination between replisome-level regulation and megabase-scale replication timing regulation, implicating a link between their coordination and genome stability.


Subject(s)
DNA Replication Timing , Embryo, Mammalian , Embryonic Development , Genomic Instability , Animals , Female , Male , Mice , Blastocyst/cytology , Blastocyst/metabolism , Chromosome Aberrations/drug effects , Chromosome Segregation , DNA Damage/drug effects , DNA Repair , DNA Replication Timing/drug effects , Embryo, Mammalian/cytology , Embryo, Mammalian/metabolism , Embryo, Mammalian/embryology , Embryonic Development/genetics , Genomic Instability/drug effects , Genomic Instability/genetics , S Phase/drug effects , S Phase/genetics , Single-Cell Analysis , Chromosome Breakpoints , Cell Division , Nucleosides/metabolism , Nucleosides/pharmacology , DNA-Directed DNA Polymerase/metabolism , Multienzyme Complexes/metabolism
6.
Theriogenology ; 229: 191-201, 2024 Nov.
Article in English | MEDLINE | ID: mdl-39197256

ABSTRACT

We investigated whether exogenous pregnancy-associated plasma protein-A (PAPP-A) enhances the antioxidant role of insulin-like growth factor-1 (IGF-1) in bovine in vitro embryo production (IVP). We performed standard in vitro maturation (IVM) and in vitro culture (IVC) or added menadione to promote an oxidative stressed microenvironment and evaluated the antioxidant effect of IGF-1 alone or in combination with PAPP-A (IGF-1/PAPP-A). In IVM, the treatments did not affect oocyte nuclear development, total GSH content, cumulus cell gene expression, and blastocyst yield. Nevertheless, IGF-1/PAPP-A treatment prevented an increase in reactive oxygen species (ROS) and mitochondrial membrane potential (MMP) levels. In IVC, the treatments did not affect the total GSH content on blastocysts and IVC media, but IGF-1 and IGF-1/PAPP-A treatments increased blastocyst yield compared to the menadione group. In addition, IGF-1/PAPP-A treatment had lower ROS levels and regulated genes related to embryonic quality compared to the control and menadione groups. Overall, we showed that PAPP-A could enhance the antioxidant role of IGF-1 during IVP in cattle by avoiding higher ROS levels in oocytes and blastocysts and modulating the transcriptional abundance of genes involved in oxidative protection and embryonic quality.


Subject(s)
Antioxidants , Embryo Culture Techniques , Fertilization in Vitro , Insulin-Like Growth Factor I , Pregnancy-Associated Plasma Protein-A , Animals , Cattle/embryology , Insulin-Like Growth Factor I/pharmacology , Insulin-Like Growth Factor I/metabolism , Pregnancy-Associated Plasma Protein-A/metabolism , Pregnancy-Associated Plasma Protein-A/genetics , Embryo Culture Techniques/veterinary , Antioxidants/pharmacology , Fertilization in Vitro/veterinary , In Vitro Oocyte Maturation Techniques/veterinary , In Vitro Oocyte Maturation Techniques/methods , Reactive Oxygen Species/metabolism , Female , Embryonic Development/drug effects , Blastocyst/drug effects , Blastocyst/metabolism
7.
Cell Reprogram ; 26(4): 120-123, 2024 Aug.
Article in English | MEDLINE | ID: mdl-39088354

ABSTRACT

Cloning by somatic cell nuclear transfer (SCNT) remained challenging for Rhesus monkeys, mostly due to its low efficiency and neonatal death. Genome-scale analyses revealed that monkey SCNT embryos displayed widespread DNA methylation and transcriptional alterations, thus including loss of genomic imprinting that correlated with placental dysfunction. The transfer of inner cell masses (ICM) from cloned blastocysts into ICM-depleted fertilized embryos rescued placental insufficiency and gave rise to a cloned Rhesus monkey that reached adulthood without noticeable abnormalities.


Subject(s)
Cloning, Organism , DNA Methylation , Macaca mulatta , Nuclear Transfer Techniques , Animals , Nuclear Transfer Techniques/veterinary , Macaca mulatta/genetics , Female , Pregnancy , Genomic Imprinting , Blastocyst/cytology , Blastocyst/metabolism , Genome
8.
Reprod Biomed Online ; 49(4): 104322, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39121560

ABSTRACT

The discovery of DNA in blastocoel fluid (BF-DNA) generated new perspectives in the potential development of simpler and safer alternative non-invasive tests in reproductive genetics. Short DNA fragments of apoptotic origin, together with specific expression patterns of pro- and anti-apoptotic genes in the blastocoel fluid of euploid and aneuploid embryos, suggest a self-correction mechanism to preferentially eliminate aneuploid cells, and purge defective and non-viable cells. The correlation of blastocoel fluid content with the genetic status of the whole embryo, and therefore its potential use in minimally invasive preimplantation genetic testing (miPGT), or as an indicator of embryo potential, remains uncertain and needs to be determined. The limited amount and compromised integrity of BF-DNA, with likely apoptotic origination, constrains its amplification, leading to low concordance and reproducibility rates for both aneuploidy screening and monogenic testing. While embryo genotyping constitutes a more ambitious goal, the presence of analysable DNA after amplification in blastocoel fluid may be used as a clinical biomarker of embryo competency to select the most viable embryo(s) for transfer, and potentially improve the implantation rate. Although blastocentesis remains a promising area for future research, several technical and methodological limitations are currently constraining its consideration for clinical practice.


Subject(s)
DNA , Preimplantation Diagnosis , Humans , Preimplantation Diagnosis/methods , DNA/analysis , Female , Pregnancy , Biomarkers/metabolism , Aneuploidy , Genetic Testing/methods , Blastocyst/metabolism
9.
Reprod Biol Endocrinol ; 22(1): 105, 2024 Aug 20.
Article in English | MEDLINE | ID: mdl-39164729

ABSTRACT

BACKGROUND: Obesity is a global health issue with detrimental effects on various human organs, including the reproductive system. Observational human data and several lines of animal experimental data suggest that maternal obesity impairs ovarian function and early embryo development, but the precise pathogenesis remains unclear. METHODS: We established a high-fat diet (HFD)-induced obese female mouse model to assess systemic metabolism, ovarian morphology, and oocyte function in mice. For the first time, this study employed single-cell RNA sequencing to explore the altered transcriptomic landscape of preimplantation embryos at different stages in HFD-induced obese mice. Differential gene expression analysis, enrichment analysis and protein-protein interactions network analysis were performed. RESULTS: HFD-induced obese female mice exhibited impaired glucolipid metabolism and insulin resistance. The ovaries of HFD mice had a reduced total follicle number, an increased proportion of atretic follicles, and irregular granulosa cell arrangement. Furthermore, the maturation rate of embryonic development by in vitro fertilization of oocytes was significantly decreased in HFD mice. Additionally, the transcriptional landscapes of preimplantation embryos at different stages in mice induced by different diets were significantly distinguished. The maternal-to-zygotic transition was also affected by the failure to remove maternal RNAs and to turn off zygotic genome expression. CONCLUSIONS: HFD-induced obesity impaired ovarian morphology and oocyte function in female mice and further led to alterations in the transcriptional landscape of preimplantation embryos at different stages of HFD mice.


Subject(s)
Diet, High-Fat , Embryonic Development , Obesity , Oocytes , Sequence Analysis, RNA , Single-Cell Analysis , Animals , Female , Diet, High-Fat/adverse effects , Oocytes/metabolism , Mice , Embryonic Development/genetics , Embryonic Development/drug effects , Obesity/genetics , Obesity/metabolism , Mice, Inbred C57BL , Pregnancy , Blastocyst/metabolism
10.
Int J Mol Sci ; 25(16)2024 Aug 08.
Article in English | MEDLINE | ID: mdl-39201343

ABSTRACT

Blastocyst vitrification has significantly improved embryo transfer methods, leading to higher implantation success rates and better pregnancy outcomes in subsequent frozen embryo transfer cycles. This study aimed to simulate the transcriptional changes caused by vitrifying human blastocysts using mouse blastocysts as a model and to further investigate these changes' effects. Utilizing a human vitrification protocol, we implanted both vitrified and fresh embryos into mice. We observed the implantation success rates and performed transcriptomic analysis on the blastocysts. To validate the results from messenger RNA sequencing, we conducted reverse transcriptase-quantitative polymerase chain reaction (RT-qPCR) to measure the expression levels of specific genes. Based on mRNA profiling, we predicted the microRNAs responsible for the regulation and used qPCR basic microRNA assays for validation. Our observations revealed a higher implantation success rate for vitrified embryos than fresh embryos. Transcriptomic analysis showed that vitrified-warmed blastocysts exhibited differentially expressed genes (DEGs) primarily associated with thermogenesis, chemical carcinogenesis-reactive oxygen species, oxidative phosphorylation, immune response, and MAPK-related signaling pathways. RT-qPCR confirmed increased expression of genes such as Cdk6 and Nfat2, and decreased expression of genes such as Dkk3 and Mapk10. Additionally, gene-microRNA interaction predictions and microRNA expression analysis identified twelve microRNAs with expression patterns consistent with the predicted results, suggesting potential roles in uterine epithelial cell adhesion, trophectoderm development, invasive capacity, and immune responses. Our findings suggest that vitrification induces transcriptomic changes in mouse blastocysts, and even small changes in gene expression can enhance implantation success. These results highlight the importance of understanding the molecular mechanisms underlying vitrification to optimize embryo transfer techniques and improve pregnancy outcomes.


Subject(s)
Blastocyst , Cryopreservation , Embryo Implantation , Gene Expression Profiling , MicroRNAs , Vitrification , Animals , Blastocyst/metabolism , Mice , Embryo Implantation/genetics , Female , Cryopreservation/methods , Gene Expression Profiling/methods , Pregnancy , MicroRNAs/genetics , Transcriptome , Embryo Transfer/methods , Gene Expression Regulation, Developmental
11.
Stem Cell Res Ther ; 15(1): 245, 2024 Aug 07.
Article in English | MEDLINE | ID: mdl-39113095

ABSTRACT

BACKGROUND: The establishment of stable porcine embryonic stem cells (pESCs) can contribute to basic and biomedical research, including comparative developmental biology, as well as assessing the safety of stem cell-based therapies. Despite these advantages, most pESCs obtained from in vitro blastocysts require complex media and feeder layers, making routine use, genetic modification, and differentiation into specific cell types difficult. We aimed to establish pESCs with a single cell-passage ability, high proliferative potency, and stable in long-term culture from in vitro-derived blastocysts using a simplified serum-free medium. METHODS: We evaluated the establishment efficiency of pESCs from in vitro blastocysts using various basal media (DMEM/F10 (1:1), DMEM/F12, and a-MEM) and factors (FGF2, IWR-1, CHIR99021, and WH-4-023). The pluripotency and self-renewal capacity of the established pESCs were analyzed under feeder or feeder-free conditions. Ultimately, we developed a simplified culture medium (FIW) composed of FGF2, IWR-1, and WH-4-023 under serum-free conditions. RESULTS: The pESC-FIW lines were capable of single-cell passaging with short cell doubling times and expressed the pluripotency markers POU5F1, SOX2, and NANOG, as well as cell surface markers SSEA1, SSEA4, and TRA-1-60. pESC-FIW showed a stable proliferation rate and normal karyotype, even after 50 passages. Transcriptome analysis revealed that pESC-FIW were similar to reported pESC maintained in complex media and showed gastrulating epiblast cell characteristics. pESC-FIW were maintained for multiple passages under feeder-free conditions on fibronectin-coated plates using mTeSR™, a commercial medium used for feeder-free culture, exhibiting characteristics similar to those observed under feeder conditions. CONCLUSIONS: These results indicated that inhibition of WNT and SRC was sufficient to establish pESCs capable of single-cell passaging and feeder-free expansion under serum-free conditions. The easy maintenance of pESCs facilitates their application in gene editing technology for agriculture and biomedicine, as well as lineage commitment studies.


Subject(s)
Embryonic Stem Cells , Animals , Culture Media, Serum-Free/pharmacology , Swine , Embryonic Stem Cells/metabolism , Embryonic Stem Cells/cytology , Cell Differentiation , Feeder Cells/cytology , Feeder Cells/metabolism , Cell Culture Techniques/methods , Cell Proliferation , Blastocyst/cytology , Blastocyst/metabolism , Cells, Cultured
12.
BMC Genomics ; 25(1): 775, 2024 Aug 09.
Article in English | MEDLINE | ID: mdl-39118001

ABSTRACT

BACKGROUND: Appropriate regulation of genes expressed in oocytes and embryos is essential for acquisition of developmental competence in mammals. Here, we hypothesized that several genes expressed in oocytes and pre-implantation embryos remain unknown. Our goal was to reconstruct the transcriptome of oocytes (germinal vesicle and metaphase II) and pre-implantation cattle embryos (blastocysts) using short-read and long-read sequences to identify putative new genes. RESULTS: We identified 274,342 transcript sequences and 3,033 of those loci do not match a gene present in official annotations and thus are potential new genes. Notably, 63.67% (1,931/3,033) of potential novel genes exhibited coding potential. Also noteworthy, 97.92% of the putative novel genes overlapped annotation with transposable elements. Comparative analysis of transcript abundance identified that 1,840 novel genes (recently added to the annotation) or potential new genes were differentially expressed between developmental stages (FDR < 0.01). We also determined that 522 novel or potential new genes (448 and 34, respectively) were upregulated at eight-cell embryos compared to oocytes (FDR < 0.01). In eight-cell embryos, 102 novel or putative new genes were co-expressed (|r|> 0.85, P < 1 × 10-8) with several genes annotated with gene ontology biological processes related to pluripotency maintenance and embryo development. CRISPR-Cas9 genome editing confirmed that the disruption of one of the novel genes highly expressed in eight-cell embryos reduced blastocyst development (ENSBTAG00000068261, P = 1.55 × 10-7). CONCLUSIONS: Our results revealed several putative new genes that need careful annotation. Many of the putative new genes have dynamic regulation during pre-implantation development and are important components of gene regulatory networks involved in pluripotency and blastocyst formation.


Subject(s)
Blastocyst , Embryonic Development , Gene Expression Regulation, Developmental , Oocytes , Animals , Cattle , Embryonic Development/genetics , Oocytes/metabolism , Blastocyst/metabolism , Transcriptome , Molecular Sequence Annotation , Gene Expression Profiling , Female
13.
Methods Mol Biol ; 2818: 81-91, 2024.
Article in English | MEDLINE | ID: mdl-39126468

ABSTRACT

Homologous recombination plays pivotal roles in physical attachments and genetic diversity. In the past, it was studied among individuals from different populations. However, only few gametes from individual could generate offspring, which limits its exploration in nature selection. In the last few years, preimplantation blastocysts based on trio SNP-chip data were available in individuals for preimplantation genetic testing (PGT). In this protocol, we demonstrate how to detect meiotic recombination events and construct the genetic map based on trio SNP-chip data, obtained from biopsied blastocysts and their related individuals in PGT cycles, which may allow better understanding of recombination events in nature selection.


Subject(s)
Blastocyst , Meiosis , Polymorphism, Single Nucleotide , Humans , Meiosis/genetics , Blastocyst/metabolism , Blastocyst/cytology , Female , Preimplantation Diagnosis/methods , Chromosome Mapping/methods , Homologous Recombination , Oligonucleotide Array Sequence Analysis/methods , Recombination, Genetic
14.
BMC Endocr Disord ; 24(1): 142, 2024 Aug 06.
Article in English | MEDLINE | ID: mdl-39107770

ABSTRACT

BACKGROUND: Extensive research has been conducted on embryonic developmental disorders linked to Polycystic Ovary Syndrome (PCOS), a pathological condition that affects 5-10% of women and is characterized by irregularities in the menstrual cycle and infertility. By employing RNA sequencing (RNA-seq), we performed an in-depth investigation of PCOS-related changes in gene expression patterns at the mouse blastocyst stage. METHODS: The zygotes of female B6D2 mice were obtained and then differentiated into blastocysts in K + Simplex Optimised Medium (KSOM) cultures containing exo-NC (negative control for exosomes) or exo-LIPE-AS1 (a novel exosomal marker of PCOS). Subsequently, blastocysts were collected for RNA-seq. The bioinformatics was performed to analyze and compare the differences of gene expression profile between blastocysts of control and PCOS group. RESULTS: There were 1150 differentially expressed genes (DEGs) between the two groups of mouse blastocysts; 243 genes were upregulated and 907 downregulated in the blastocysts of the exo-LIPE-AS1 group compared to those of the exo-NC group. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that the genes involved in amino acid synthesis and glutathione metabolic pathways were down-regulated in exo-LIPE-AS1 group. CONCLUSION: This study has revealed that blastocyst developmental retardation may be associated with the downregulation of amino acid synthesis and glutathione metabolism, which may affect energy metabolism, biosynthesis, cellular osmotic pressure, antioxidant synthesis, ROS clearance or mitochondrial function, and ultimately cause blastocyst cell development abnormalities. Our research offers encouraging data on the mechanisms underlying aberrant embryonic development in patients with PCOS as well as potential treatment strategies.


Subject(s)
Amino Acids , Blastocyst , Embryonic Development , Glutathione , Polycystic Ovary Syndrome , Animals , Polycystic Ovary Syndrome/metabolism , Polycystic Ovary Syndrome/genetics , Polycystic Ovary Syndrome/pathology , Female , Mice , Blastocyst/metabolism , Embryonic Development/genetics , Glutathione/metabolism , Amino Acids/metabolism , Sequence Analysis, RNA , Disease Models, Animal , Gene Expression Regulation, Developmental
15.
Sci Rep ; 14(1): 20160, 2024 08 29.
Article in English | MEDLINE | ID: mdl-39215103

ABSTRACT

Site-specific recombinases (SSRs) are critical for achieving precise spatiotemporal control of engineered alleles. These enzymes play a key role in facilitating the deletion or inversion of loci flanked by recombination sites, resulting in the activation or repression of endogenous genes, selection markers or reporter elements. However, multiple recombination in complex alleles can be laborious. To address this, a new and efficient method using AAV vectors has been developed to simplify the conversion of systems based on Cre, FLP, Dre and Vika recombinases. In this study, we present an effective method for ex vivo allele conversion using Cre, FLP (flippase), Dre, and Vika recombinases, employing adeno-associated viruses (AAV) as delivery vectors. AAVs enable efficient allele conversion with minimal toxicity in a reporter mouse line. Moreover, AAVs facilitate sequential allele conversion, essential for fully converting alleles with multiple recombination sites, typically found in conditional knockout mouse models. While simple allele conversions show a 100% efficiency rate, complex multiple conversions consistently achieve an 80% conversion rate. Overall, this strategy markedly reduces the need for animals and significantly speeds up the process of allele conversion, representing a significant improvement in genome engineering techniques.


Subject(s)
Alleles , Dependovirus , Genetic Vectors , Animals , Dependovirus/genetics , Genetic Vectors/genetics , Mice , Gene Conversion , Blastocyst/metabolism , DNA Nucleotidyltransferases/genetics , DNA Nucleotidyltransferases/metabolism , Recombination, Genetic
16.
Curr Opin Organ Transplant ; 29(5): 340-348, 2024 Oct 01.
Article in English | MEDLINE | ID: mdl-39150364

ABSTRACT

PURPOSE OF REVIEW: Blastocyst complementation represents a promising frontier in next-generation lung replacement therapies. This review aims to elucidate the future prospects of lung blastocyst complementation within clinical settings, summarizing the latest studies on generating functional lungs through this technique. It also explores and discusses host animal selection relevant to interspecific chimera formation, a challenge integral to creating functional human lungs via blastocyst complementation. RECENT FINDINGS: Various gene mutations have been utilized to create vacant lung niches, enhancing the efficacy of donor cell contribution to the complemented lungs in rodent models. By controlling the lineage to induce gene mutations, chimerism in both the lung epithelium and mesenchyme has been improved. Interspecific blastocyst complementation underscores the complexity of developmental programs across species, with several genes identified that enhance chimera formation between humans and other mammals. SUMMARY: While functional lungs have been generated via intraspecies blastocyst complementation, the generation of functional interspecific lungs remains unrealized. Addressing the challenges of controlling the host lung niche and selecting host animals relevant to interspecific barriers between donor human and host cells is critical to enabling the generation of functional humanized or entire human lungs in large animals.


Subject(s)
Blastocyst , Lung Transplantation , Lung , Humans , Animals , Lung/surgery , Blastocyst/metabolism , Transplantation Chimera , Lung Diseases/surgery , Lung Diseases/genetics
17.
Nat Commun ; 15(1): 6418, 2024 Jul 30.
Article in English | MEDLINE | ID: mdl-39080296

ABSTRACT

Histone lysine crotonylation, an evolutionarily conserved modification differing from acetylation, exerts pivotal control over diverse biological processes. Among these are gene transcriptional regulation, spermatogenesis, and cell cycle processes. However, the dynamic changes and functions of histone crotonylation in preimplantation embryonic development in mammals remain unclear. Here, we show that the transcription coactivator P300 functions as a writer of histone crotonylation during embryonic development. Depletion of P300 results in significant developmental defects and dysregulation of the transcriptome of embryos. Importantly, we demonstrate that P300 catalyzes the crotonylation of histone, directly stimulating transcription and regulating gene expression, thereby ensuring successful progression of embryo development up to the blastocyst stage. Moreover, the modification of histone H3 lysine 18 crotonylation (H3K18cr) is primarily localized to active promoter regions. This modification serves as a distinctive epigenetic indicator of crucial transcriptional regulators, facilitating the activation of gene transcription. Together, our results propose a model wherein P300-mediated histone crotonylation plays a crucial role in regulating the fate of embryonic development.


Subject(s)
Blastocyst , E1A-Associated p300 Protein , Embryonic Development , Gene Expression Regulation, Developmental , Histones , Lysine , Histones/metabolism , Animals , Embryonic Development/genetics , Female , Mice , E1A-Associated p300 Protein/metabolism , E1A-Associated p300 Protein/genetics , Blastocyst/metabolism , Lysine/metabolism , Humans , Protein Processing, Post-Translational , Promoter Regions, Genetic , Epigenesis, Genetic , Male
18.
J Assist Reprod Genet ; 41(9): 2257-2269, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38951360

ABSTRACT

PURPOSE: Retrotransposons play important roles during early development when they are transiently de-repressed during epigenetic reprogramming. Long interspersed element-1 (L1), the only autonomous retrotransposon in humans, comprises 17% of the human genome. We applied the Single Cell Transposon Insertion Profiling by Sequencing (scTIPseq) to characterize and map L1 insertions in human embryos. METHODS: Sixteen cryopreserved, genetically tested, human blastocysts, were accessed from consenting couples undergoing IVF at NYU Langone Fertility Center. Additionally, four trios (father, mother, and embryos) were also evaluated. scTIPseq was applied to map L1 insertions in all samples, using L1 locations reported in the 1000 Genomes as controls. RESULTS: Twenty-nine unknown and unique insertions were observed in the sixteen embryos. Most were intergenic; no insertions were located in exons or immediately upstream of genes. The location or number of unknown insertions did not differ between euploid and aneuploid embryos, suggesting they are not merely markers of aneuploidy. Rather, scTIPseq provides novel information about sub-chromosomal structural variation in human embryos. Trio analyses showed a parental origin of all L1 insertions in embryos. CONCLUSION: Several studies have measured L1 expression at different stages of development in mice, but this study for the first time reports unknown insertions in human embryos that were inherited from one parent, confirming no de novo L1 insertions occurred in parental germline or during embryogenesis. Since one-third of euploid embryo transfers fail, future studies would be useful for understanding whether these sub-chromosomal genetic variants or de novo L1 insertions affect embryo developmental potential.


Subject(s)
Blastocyst , Long Interspersed Nucleotide Elements , Humans , Long Interspersed Nucleotide Elements/genetics , Blastocyst/metabolism , Female , Embryo, Mammalian/metabolism , Embryonic Development/genetics , Mutagenesis, Insertional/genetics , Aneuploidy , Genome, Human/genetics , Fertilization in Vitro , Male , Genetic Variation/genetics , Mice , Chromosome Mapping/methods
19.
J Assist Reprod Genet ; 41(9): 2311-2318, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38976133

ABSTRACT

PURPOSE: To evaluate the association, if any, between the grade of the trophectoderm (TE) and the rate at which ß-human-chorionic gonadotropin (ß-HCG) rises in early pregnancy. METHODS: This is a retrospective cohort study including 1116 singleton clinical pregnancies resulting from in vitro fertilization with single day 5 blastocyst transfer at an academic fertility center. TE quality was assessed by trained embryologists employing standard criteria. Three groups were formed based on the TE grade: grade A (n = 358), grade B (n = 628), and grade C (n = 130). Main outcome measure was the rise (%) in serum levels of ß-HCG (days 12 to 14 post embryo transfer), using the following formula [(ß-HCG D14 - ß-HCG D12) * 100/ß-HCG D12]. RESULTS: Fresh embryo transfers accounted for 64.1% of the population. Overall, in adjusted models there were no significant differences in the ß-HCG% rise when comparing the TE grade C group to TE grade A [adjß (95%CI): 10.09 (- 0.05, 20.22)] or when comparing TE grade Β group to TE grade A [4.46 (- 2.97, 11.88)]. When the analysis was restricted to fresh embryo transfers, significant differences were observed in the % rise of ß-HCG when comparing the TE grade C group to TE grade A [adjß (95%CI): 21.71 (5.67, 37.74)], but not when comparing the TE grade B group to TE grade A [2.68 (- 5.59, 10.95)]. In frozen transfers, there were no significant differences. CONCLUSION: TE grade appears to impact early pregnancy serum ß-HCG levels in the setting of a fresh day 5 embryo transfer, even after adjusting for potential confounders.


Subject(s)
Chorionic Gonadotropin, beta Subunit, Human , Embryo Transfer , Fertilization in Vitro , Humans , Female , Pregnancy , Adult , Chorionic Gonadotropin, beta Subunit, Human/blood , Retrospective Studies , Blastocyst/metabolism , Pregnancy Rate , Trophoblasts/metabolism
20.
J Assist Reprod Genet ; 41(9): 2397-2404, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38995508

ABSTRACT

PURPOSE: To assess the impact of maternal age on the association between maternal basal FSH and aneuploidy. METHODS: A retrospective study including data from 1749 blastocysts diagnosed as euploid or aneuploid by PGT-A (preimplantation genetic testing for aneuploidy). Aneuploidy incidence was compared between embryos from mothers with high vs. low basal FSH levels (above and below the group median, respectively) in total, pre-AMA (advanced maternal age; < 35 years, 198 embryos) and AMA (≥ 35 years, 1551 embryos) patient groups, separately. To control for the interference of potentially confounding variables, the association between aneuploidy and high basal FSH levels was assessed by multivariate logistic analysis in overall, pre-AMA and AMA patient groups. RESULTS: Overall, aneuploidy rate was 9% higher (p = 0.02) in embryos from patients with high basal FSH (63.7%) compared to those with low basal FSH (58.4%). In the pre-AMA subgroup, aneuploidy incidence was 35% higher (p = 0.04) in embryos from patients with high basal FSH (53.5%) compared to those with low basal FSH (39.4%). Differently, aneuploidy occurrence did not vary between embryos from AMA patients with low (61.0%) and high (64.8%) basal FSH (p = 0.12). The multivariate analysis revealed that, in pre-AMA embryos, the association between aneuploidy occurrence and high basal FSH is independent of potential confounding variables (p = 0.04). CONCLUSION: Maternal basal FSH values are associated with embryo aneuploidy in pre-AMA but not in AMA patients. The present findings suggest that basal FSH is a useful parameter to assess aneuploidy risk in pre-AMA patients and reinforce the hypothesis that excessive FSH signalling can predispose to oocyte meiotic errors.


Subject(s)
Aneuploidy , Follicle Stimulating Hormone , Maternal Age , Humans , Female , Adult , Follicle Stimulating Hormone/blood , Pregnancy , Preimplantation Diagnosis , Retrospective Studies , Incidence , Blastocyst/metabolism , Fertilization in Vitro , Embryo Transfer , Genetic Testing , Pregnancy Rate
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