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1.
Development ; 151(13)2024 Jul 01.
Article in English | MEDLINE | ID: mdl-38884356

ABSTRACT

Neural crest cells are a stem cell population unique to vertebrate embryos that retains broad multi-germ layer developmental potential through neurulation. Much remains to be learned about the genetic and epigenetic mechanisms that control the potency of neural crest cells. Here, we examine the role that epigenetic readers of the BET (bromodomain and extra terminal) family play in controlling the potential of pluripotent blastula and neural crest cells. We find that inhibiting BET activity leads to loss of pluripotency at blastula stages and a loss of neural crest at neurula stages. We compare the effects of HDAC (an eraser of acetylation marks) and BET (a reader of acetylation) inhibition and find that they lead to similar cellular outcomes through distinct effects on the transcriptome. Interestingly, loss of BET activity in cells undergoing lineage restriction is coupled to increased expression of genes linked to pluripotency and prolongs the competence of initially pluripotent cells to transit to a neural progenitor state. Together these findings advance our understanding of the epigenetic control of pluripotency and the formation of the vertebrate neural crest.


Subject(s)
Neural Crest , Animals , Neural Crest/cytology , Neural Crest/metabolism , Epigenesis, Genetic , Gene Expression Regulation, Developmental , Xenopus Proteins/metabolism , Xenopus Proteins/genetics , Xenopus laevis/embryology , Blastula/metabolism , Blastula/cytology , Cell Differentiation , Pluripotent Stem Cells/cytology , Pluripotent Stem Cells/metabolism , Transcriptome/genetics
2.
Development ; 151(14)2024 Jul 15.
Article in English | MEDLINE | ID: mdl-38940470

ABSTRACT

SoxB1 transcription factors (Sox2/3) are well known for their role in early neural fate specification in the embryo, but little is known about functional roles for SoxB1 factors in non-neural ectodermal cell types, such as the neural plate border (NPB). Using Xenopus laevis, we set out to determine whether SoxB1 transcription factors have a regulatory function in NPB formation. Here, we show that SoxB1 factors are necessary for NPB formation, and that prolonged SoxB1 factor activity blocks the transition from a NPB to a neural crest state. Using ChIP-seq, we demonstrate that Sox3 is enriched upstream of NPB genes in early NPB cells and in blastula stem cells. Depletion of SoxB1 factors in blastula stem cells results in downregulation of NPB genes. Finally, we identify Pou5f3 factors as potential Sox3 partners in regulating the formation of the NPB and show that their combined activity is needed for normal NPB gene expression. Together, these data identify a role for SoxB1 factors in the establishment and maintenance of the NPB, in part through partnership with Pou5f3 factors.


Subject(s)
Gene Expression Regulation, Developmental , Neural Crest , Neural Plate , SOXB1 Transcription Factors , Xenopus Proteins , Xenopus laevis , Animals , Neural Plate/metabolism , Neural Plate/embryology , SOXB1 Transcription Factors/metabolism , SOXB1 Transcription Factors/genetics , Xenopus Proteins/metabolism , Xenopus Proteins/genetics , Neural Crest/metabolism , Neural Crest/cytology , Blastula/metabolism , Embryo, Nonmammalian/metabolism
3.
Science ; 384(6700): 1105-1110, 2024 Jun 07.
Article in English | MEDLINE | ID: mdl-38843334

ABSTRACT

Axis formation in fish and amphibians typically begins with a prepattern of maternal gene products. Annual killifish embryogenesis, however, challenges prepatterning models as blastomeres disperse and then aggregate to form the germ layers and body axes. We show that huluwa, a prepatterning factor thought to break symmetry by stabilizing ß-catenin, is truncated and inactive in Nothobranchius furzeri. Nuclear ß-catenin is not selectively stabilized on one side of the blastula but accumulates in cells forming the aggregate. Blocking ß-catenin activity or Nodal signaling disrupts aggregate formation and germ layer specification. Nodal signaling coordinates cell migration, establishing an early role for this signaling pathway. These results reveal a surprising departure from established mechanisms of axis formation: Huluwa-mediated prepatterning is dispensable, and ß-catenin and Nodal regulate morphogenesis.


Subject(s)
Fundulidae , Morphogenesis , Nodal Protein , beta Catenin , Animals , beta Catenin/metabolism , Blastula/metabolism , Body Patterning , Cell Movement , Cell Nucleus/metabolism , Fundulidae/embryology , Fundulidae/metabolism , Germ Layers/metabolism , Nodal Protein/metabolism , Signal Transduction
4.
J Radiat Res ; 65(3): 315-322, 2024 May 23.
Article in English | MEDLINE | ID: mdl-38648785

ABSTRACT

Ionizing radiation (IR) causes DNA damage, particularly DNA double-strand breaks (DSBs), which have significant implications for genome stability. The major pathways of repairing DSBs are homologous recombination (HR) and nonhomologous end joining (NHEJ). However, the repair mechanism of IR-induced DSBs in embryos is not well understood, despite extensive research in somatic cells. The externally developing aquatic organism, Xenopus tropicalis, serves as a valuable model for studying embryo development. A significant increase in zygotic transcription occurs at the midblastula transition (MBT), resulting in a longer cell cycle and asynchronous cell divisions. This study examines the impact of X-ray irradiation on Xenopus embryos before and after the MBT. The findings reveal a heightened X-ray sensitivity in embryos prior to the MBT, indicating a distinct shift in the DNA repair pathway during embryo development. Importantly, we show a transition in the dominant DSB repair pathway from NHEJ to HR before and after the MBT. These results suggest that the MBT plays a crucial role in altering DSB repair mechanisms, thereby influencing the IR sensitivity of developing embryos.


Subject(s)
Blastula , DNA Breaks, Double-Stranded , DNA Repair , Animals , DNA Breaks, Double-Stranded/radiation effects , DNA Repair/radiation effects , Blastula/radiation effects , Blastula/metabolism , Xenopus/embryology , DNA End-Joining Repair/radiation effects , Embryo, Nonmammalian/radiation effects , Embryo, Nonmammalian/metabolism , X-Rays
5.
Dev Biol ; 505: 34-41, 2024 Jan.
Article in English | MEDLINE | ID: mdl-37890713

ABSTRACT

Neural crest cells are a stem cell population unique to vertebrates that give rise to a diverse array of derivatives, including much of the peripheral nervous system, pigment cells, cartilage, mesenchyme, and bone. Acquisition of these cells drove the evolution of vertebrates and defects in their development underlies a broad set of neurocristopathies. Moreover, studies of neural crest can inform differentiation protocols for pluripotent stem cells and regenerative medicine applications. Xenopus embryos are an important system for studies of the neural crest and have provided numerous insights into the signals and transcription factors that control the formation and later lineage diversification of these stem cells. Pluripotent animal pole explants are a particularly powerful tool in this system as they can be cultured in simple salt solution and instructed to give rise to any cell type including the neural crest. Here we report a protocol for small molecule-mediated induction of the neural crest state from blastula stem cells and validate it using transcriptome analysis and grafting experiments. This is an powerful new tool for generating this important cell type that will facilitate future studies of neural crest development and mutations and variants linked to neurocristopathies.


Subject(s)
Neural Crest , Pluripotent Stem Cells , Animals , Neural Crest/metabolism , Xenopus laevis/genetics , Blastula/metabolism , Cell Differentiation
6.
EMBO J ; 42(3): e111364, 2023 02 01.
Article in English | MEDLINE | ID: mdl-36477743

ABSTRACT

Early embryonic development depends on proper utilization and clearance of maternal transcriptomes. How these processes are spatiotemporally regulated remains unclear. Here we show that nuclear RNA-binding protein Rbm14 and maternal mRNAs co-phase separate into cytoplasmic condensates to facilitate vertebrate blastula-to-gastrula development. In zebrafish, Rbm14 condensates were highly abundant in blastomeres and markedly reduced after prominent activation of zygotic transcription. They concentrated at spindle poles by associating with centrosomal γ-tubulin puncta and displayed mainly asymmetric divisions with a global symmetry across embryonic midline in 8- and 16-cell embryos. Their formation was dose-dependently stimulated by m6 A, but repressed by m5 C modification of the maternal mRNA. Furthermore, deadenylase Parn co-phase separated with these condensates, and this was required for deadenylation of the mRNAs in early blastomeres. Depletion of Rbm14 impaired embryonic cell differentiations and full activations of the zygotic genome in both zebrafish and mouse and resulted in developmental arrest at the blastula stage. Our results suggest that cytoplasmic Rbm14 condensate formation regulates early embryogenesis by facilitating deadenylation, protection, and mitotic allocation of m6 A-modified maternal mRNAs, and by releasing the poly(A)-less transcripts upon regulated disassembly to allow their re-polyadenylation and translation or clearance.


Subject(s)
RNA, Messenger, Stored , Zebrafish , Animals , Female , Mice , Pregnancy , Blastocyst/metabolism , Blastula/metabolism , Embryonic Development/genetics , Gene Expression Regulation, Developmental , RNA, Messenger/genetics , RNA, Messenger/metabolism , RNA, Messenger, Stored/genetics , RNA, Messenger, Stored/metabolism
7.
Dev Biol ; 483: 128-142, 2022 03.
Article in English | MEDLINE | ID: mdl-35038441

ABSTRACT

Brachyury is a T-box family transcription factor and plays pivotal roles in morphogenesis. In sea urchin embryos, Brachyury is expressed in the invaginating endoderm, and in the oral ectoderm of the invaginating mouth opening. The oral ectoderm is hypothesized to serve as a signaling center for oral (ventral)-aboral (dorsal) axis formation and to function as a ventral organizer. Our previous results of a single-cell RNA-seq (scRNA-seq) atlas of early Strongylocentrotus purpuratus embryos categorized the constituent cells into 22 clusters, in which the endoderm consists of three clusters and the oral ectoderm four clusters (Foster et al., 2020). Here we examined which clusters of cells expressed Brachyury in relation to the morphogenesis and the identity of the ventral organizer. Our results showed that cells of all three endoderm clusters expressed Brachyury in blastulae. Based on expression profiles of genes involved in the gene regulatory networks (GRNs) of sea urchin embryos, the three clusters are distinguishable, two likely derived from the Veg2 tier and one from the Veg1 tier. On the other hand, of the four oral-ectoderm clusters, cells of two clusters expressed Brachyury at the gastrula stage and genes that are responsible for the ventral organizer at the late blastula stage, but the other two clusters did not. At a single-cell level, most cells of the two oral-ectoderm clusters expressed organizer-related genes, nearly a half of which coincidently expressed Brachyury. This suggests that the ventral organizer contains Brachyury-positive cells which invaginate to form the stomodeum. This scRNA-seq study therefore highlights significant roles of Brachyury-expressing cells in body-plan formation of early sea urchin embryos, though cellular and molecular mechanisms for how Brachyury functions in these processes remain to be elucidated in future studies.


Subject(s)
Ectoderm/cytology , Ectoderm/metabolism , Embryonic Development/genetics , Fetal Proteins/metabolism , Gene Expression Regulation, Developmental , RNA-Seq/methods , Sea Urchins/embryology , Sea Urchins/genetics , Single-Cell Analysis/methods , T-Box Domain Proteins/metabolism , Animals , Blastula/metabolism , Ectoderm/embryology , Endoderm/embryology , Endoderm/metabolism , Gastrula/metabolism , Gene Regulatory Networks , Signal Transduction/genetics
8.
Genes (Basel) ; 12(10)2021 09 30.
Article in English | MEDLINE | ID: mdl-34680958

ABSTRACT

The maternal-to-zygotic transition (MZT) is a crucial event in embryo development. While the features of the MZT across species are shared, the stage of this transition is different among species. We characterized MZT in a flatfish species, Japanese flounder (Paralichthys olivaceus). In this study, we analyzed the 551.57 GB transcriptome data of two types of gametes (sperms and eggs) and 10 embryo developmental stages in Japanese flounder. We identified 2512 maternal factor-related genes and found that most of those maternal factor-related genes expression decreased at the low blastula (LB) stage and remained silent in the subsequent embryonic development period. Meanwhile, we verified that the zygotic genome transcription might occur at the 128-cell stage and large-scale transcription began at the LB stage, which indicates the LB stage is the major wave zygotic genome activation (ZGA) occurs. In addition, we indicated that the Wnt signaling pathway, playing a diverse role in embryonic development, was involved in the ZGA and the axis formation. The results reported the list of the maternal genes in Japanese flounder and defined the stage of MZT, contributing to the understanding of the details of MZT during Japanese flounder embryonic development.


Subject(s)
Flounder/genetics , Germ Cells/metabolism , Transcriptome , Animals , Blastula/metabolism , Fish Proteins/genetics , Fish Proteins/metabolism , Flounder/embryology , Flounder/metabolism , Gene Expression Regulation, Developmental , Germ Cells/cytology , Wnt Signaling Pathway
9.
Life Sci Alliance ; 4(10)2021 10.
Article in English | MEDLINE | ID: mdl-34376568

ABSTRACT

Ovarian cancer metastasizes into peritoneum through dissemination of transformed epithelia as multicellular spheroids. Harvested from the malignant ascites of patients, spheroids exhibit startling features of organization typical to homeostatic glandular tissues: lumen surrounded by smoothly contoured and adhered epithelia. Herein, we demonstrate that cells of specific ovarian cancer lines in suspension, aggregate into dysmorphic solid "moruloid" clusters that permit intercellular movement, cell penetration, and interspheroidal coalescence. Moruloid clusters subsequently mature into "blastuloid" spheroids with smooth contours, a temporally dynamic lumen and immotile cells. Blastuloid spheroids neither coalesce nor allow cell penetration. Ultrastructural examination reveals a basement membrane-like extracellular matrix coat on the surface of blastuloid, but not moruloid, spheroids. Quantitative proteomics reveals down-regulation in ECM protein Fibronectin-1 associated with the moruloid-blastuloid transition; immunocytochemistry also confirms the relocalization of basement membrane ECM proteins: collagen IV and laminin to the surface of blastuloid spheroids. Fibronectin depletion accelerates, and enzymatic basement membrane debridement impairs, lumen formation, respectively. The regulation by ECM dynamics of the morphogenesis of cancer spheroids potentially influences the progression of the disease.


Subject(s)
Blastula/metabolism , Blastula/pathology , Extracellular Matrix/metabolism , Morula/metabolism , Morula/pathology , Ovarian Neoplasms/metabolism , Ovarian Neoplasms/pathology , Cell Line, Tumor , Female , Fluorescent Antibody Technique , Gene Expression , Genes, Reporter , Humans , Immunohistochemistry , Ovarian Neoplasms/etiology , Spheroids, Cellular , Tumor Cells, Cultured
10.
Curr Biol ; 31(19): 4269-4281.e8, 2021 10 11.
Article in English | MEDLINE | ID: mdl-34388374

ABSTRACT

In multicellular animals, the first major event after fertilization is the switch from maternal to zygotic control of development. During this transition, zygotic gene transcription is broadly activated in an otherwise quiescent genome in a process known as zygotic genome activation (ZGA). In fast-developing embryos, ZGA often overlaps with the slowing of initially synchronous cell divisions at the mid-blastula transition (MBT). Initial studies of the MBT led to the nuclear-to-cytoplasmic ratio model where MBT timing is regulated by the exponentially increasing amounts of some nuclear component "N" titrated against a fixed cytoplasmic component "C." However, more recent experiments have been interpreted to suggest that ZGA is independent of the N/C ratio. To determine the role of the N/C ratio in ZGA, we generated Xenopus frog embryos with ∼3-fold differences in genomic DNA (i.e., N) by using X. tropicalis sperm to fertilize X. laevis eggs with or without their maternal genome. Resulting embryos have otherwise identical X. tropicalis genome template amounts, embryo sizes, and X. laevis maternal environments. We generated transcriptomic time series across the MBT in both conditions and used X. tropicalis paternally derived mRNA to identify a high-confidence set of exclusively zygotic transcripts. Both ZGA and the increase in cell-cycle duration are delayed in embryos with ∼3-fold less DNA per cell. Thus, DNA is an important component of the N/C ratio, which is a critical regulator of zygotic genome activation in Xenopus embryos.


Subject(s)
Blastula , Zygote , Animals , Blastula/metabolism , Cytoplasm , DNA/metabolism , Gene Expression , Gene Expression Regulation, Developmental , Xenopus laevis , Zygote/metabolism
11.
Proc Natl Acad Sci U S A ; 118(15)2021 04 13.
Article in English | MEDLINE | ID: mdl-33837152

ABSTRACT

Animal cytokinesis ends with the formation of a thin intercellular membrane bridge that connects the two newly formed sibling cells, which is ultimately resolved by abscission. While mitosis is completed within 15 min, the intercellular bridge can persist for hours, maintaining a physical connection between sibling cells and allowing exchange of cytosolic components. Although cell-cell communication is fundamental for development, the role of intercellular bridges during embryogenesis has not been fully elucidated. In this work, we characterized the spatiotemporal characteristics of the intercellular bridge during early zebrafish development. We found that abscission is delayed during the rapid division cycles that occur in the early embryo, giving rise to the formation of interconnected cell clusters. Abscission was accelerated when the embryo entered the midblastula transition (MBT) phase. Components of the ESCRT machinery, which drives abscission, were enriched at intercellular bridges post-MBT and, interfering with ESCRT function, extended abscission beyond MBT. Hallmark features of MBT, including transcription onset and cell shape modulations, were more similar in interconnected sibling cells compared to other neighboring cells. Collectively, our findings suggest that delayed abscission in the early embryo allows clusters of cells to coordinate their behavior during embryonic development.


Subject(s)
Blastula/embryology , Cytokinesis , Animals , Blastula/cytology , Blastula/metabolism , Cell Shape , Endosomal Sorting Complexes Required for Transport/metabolism , Zebrafish , Zebrafish Proteins/metabolism
12.
Biol Open ; 10(2)2021 02 25.
Article in English | MEDLINE | ID: mdl-33563608

ABSTRACT

The blastula Chordin- and Noggin-expressing (BCNE) center comprises animal-dorsal and marginal-dorsal cells of the amphibian blastula and contains the precursors of the brain and the gastrula organizer. Previous findings suggested that the BCNE behaves as a homogeneous cell population that only depends on nuclear ß-catenin activity but does not require Nodal and later segregates into its descendants during gastrulation. In contrast to previous findings, in this work, we show that the BCNE does not behave as a homogeneous cell population in response to Nodal antagonists. In fact, we found that chordin.1 expression in a marginal subpopulation of notochordal precursors indeed requires Nodal input. We also establish that an animal BCNE subpopulation of cells that express both, chordin.1 and sox2 (a marker of pluripotent neuroectodermal cells), and gives rise to most of the brain, persisted at blastula stage after blocking Nodal. Therefore, Nodal signaling is required to define a population of chordin.1+ cells and to restrict the recruitment of brain precursors within the BCNE as early as at blastula stage. We discuss our findings in Xenopus in comparison to other vertebrate models, uncovering similitudes in early brain induction and delimitation through Nodal signaling.


Subject(s)
Blastula/metabolism , Brain/embryology , Brain/metabolism , Organizers, Embryonic/embryology , Organizers, Embryonic/metabolism , Receptors, Notch/metabolism , Signal Transduction , Animals , Biomarkers , Blastula/cytology , Embryonic Development/genetics , Gastrula/embryology , Gastrula/metabolism , Gene Expression Regulation, Developmental , Models, Biological , Organogenesis , Xenopus laevis
13.
Dev Biol ; 475: 131-144, 2021 07.
Article in English | MEDLINE | ID: mdl-33484706

ABSTRACT

Coup-TF, a member of the nuclear receptor super-family, is present in the pool of maternal mRNAs and proteins in the sea urchin egg. The presence of this protein seems to be essential for the execution of the early developmental program, leading to all three embryonic layers. Our results demonstrate that Pl-Coup-TF morphants, i.e. Pl-Coup-TF morpholino knockdown embryos, resemble blastulae that lack archenteron at 24 hpf (hours post fertilization), a stage at which normal embryos reach the end of gastrulation in Paracentrotus lividus. At 48 hpf, when normal embryos reach the pluteus larva stage, the morphants are seemingly underdeveloped and lack the characteristic skeletal rods. Nevertheless, the morphant embryos express vegetal endomesodermal marker genes, such as Pl-Blimp1, Pl-Endo16, Pl-Alx1 and Pl-Tbr as judged by in situ hybridization experiments. The anterior neuroectoderm genes, Pl-FoxQ2, Pl-Six3 and Pl-Pax6, are also expressed in the morphant embryos, but Pl-Hbn and Pl-Fez mRNAs, which encode proteins significant for the differentiation of serotonergic neurons, are not detected. Consequently, Pl-Coup-TF morphants at 48 hpf lack serotonergic neurons, whereas normal 48 hpf plutei exhibit the formation of two bilateral pairs of such neurons in the apical organ. Furthermore, genes indicative of the ciliary band formation, Pl-Hnf6, Pl-Dri, Pl-FoxG and Pl-Otx, are not expressed in Pl-Coup-TF morphants, suggesting the disruption of this neurogenic territory as well. In addition, the Pl-SynB gene, a marker of differentiated neurons, is silent leading to the hypothesis that Pl-Coup-TF morphants might lack all types of neurons. On the contrary, the genes expressing signaling molecules, which establish the ventral/dorsal axis, Pl-Nodal and Pl-Lefty show the characteristic ventral lateral expression pattern, Pl-Bmp2/4, which activates the dorsal ectoderm GRN is down-regulated and Pl-Chordin is aberrantly over-expressed in the entire ectoderm. The identity of ectodermal cells in Pl-Coup-TF morphant embryos, was probed for expression of the ventral marker Pl-Gsc which was over-expressed and dorsal markers, Pl-IrxA and Pl-Hox7, which were silent. Therefore, we propose that maternal Pl-Coup-TF is essential for correct dissemination of the early embryonic signaling along both animal/vegetal and ventral/dorsal axes. Limiting Pl-Coup-TF's quantity, results in an embryo without digestive and nervous systems, skeleton and ciliary band that cannot survive past the initial 48 h of development.


Subject(s)
Body Patterning/genetics , COUP Transcription Factors/metabolism , Paracentrotus/embryology , Animals , Blastula/metabolism , COUP Transcription Factors/genetics , COUP Transcription Factors/physiology , Cell Differentiation/genetics , Ectoderm/metabolism , Embryo, Nonmammalian/metabolism , Gene Expression/genetics , Gene Expression Regulation, Developmental/genetics , Mating Factor/genetics , Mating Factor/metabolism , Neural Plate/metabolism , Paracentrotus/genetics , Sea Urchins/embryology , Sea Urchins/metabolism , Signal Transduction/physiology
14.
Development ; 148(2)2021 01 20.
Article in English | MEDLINE | ID: mdl-33298464

ABSTRACT

During sea urchin development, secretion of Nodal and BMP2/4 ligands and their antagonists Lefty and Chordin from a ventral organiser region specifies the ventral and dorsal territories. This process relies on a complex interplay between the Nodal and BMP pathways through numerous regulatory circuits. To decipher the interplay between these pathways, we used a combination of treatments with recombinant Nodal and BMP2/4 proteins and a computational modelling approach. We assembled a logical model focusing on cell responses to signalling inputs along the dorsal-ventral axis, which was extended to cover ligand diffusion and enable multicellular simulations. Our model simulations accurately recapitulate gene expression in wild-type embryos, accounting for the specification of ventral ectoderm, ciliary band and dorsal ectoderm. Our model simulations further recapitulate various morphant phenotypes, reveal a dominance of the BMP pathway over the Nodal pathway and stress the crucial impact of the rate of Smad activation in dorsal-ventral patterning. These results emphasise the key role of the mutual antagonism between the Nodal and BMP2/4 pathways in driving early dorsal-ventral patterning of the sea urchin embryo.


Subject(s)
Body Patterning , Embryo, Nonmammalian/metabolism , Paracentrotus/embryology , Signal Transduction , Transforming Growth Factor beta/metabolism , Animals , Blastula/metabolism , Body Patterning/drug effects , Body Patterning/genetics , Bone Morphogenetic Proteins/metabolism , Cell Lineage/drug effects , Cell Lineage/genetics , Computer Simulation , Embryo, Nonmammalian/drug effects , Gene Expression Regulation, Developmental/drug effects , Glycoproteins/metabolism , Intercellular Signaling Peptides and Proteins/metabolism , Models, Biological , Morpholinos/pharmacology , Nodal Protein/metabolism , Paracentrotus/drug effects , Paracentrotus/genetics , Phenotype , Probability , Signal Transduction/drug effects , Signal Transduction/genetics , Stochastic Processes
15.
J Biochem ; 169(3): 313-326, 2021 Apr 18.
Article in English | MEDLINE | ID: mdl-33169160

ABSTRACT

In the nucleus of eukaryotic cells, chromatin is tethered to the nuclear envelope (NE), wherein inner nuclear membrane proteins (INMPs) play major roles. However, in Xenopus blastula, chromatin tethering to the NE depends on nuclear filamentous actin that develops in a blastula-specific manner. To investigate whether chromatin tethering operates in the blastula through INMPs, we experimentally introduced INMPs into Xenopus egg extracts that recapitulate nuclear formation in fertilized eggs. When expressed in extracts in which polymerization of actin is inhibited, only lamin B receptor (LBR), among the five INMPs tested, tethered chromatin to the NE, depending on its N2 and N3 domains responsible for chromatin-protein binding. N2-3-deleted LBR did not tether chromatin, although it was localized in the nuclei. We subsequently found that the LBR level was very low in the Xenopus blastula but was elevated after the blastula stage. When the LBR level was precociously elevated in the blastula by injecting LBR mRNA, it induced alterations in nuclear lamina architecture and nuclear morphology and caused DNA damage and abnormal mitotic spindles, depending on the N2-3 domains. These results suggest that LBR-mediated chromatin tethering is circumvented in the Xenopus blastula, as it is detrimental to embryonic development.


Subject(s)
Blastula/metabolism , Chromatin/metabolism , Lamin Type B/metabolism , Nuclear Envelope/metabolism , Receptors, Cytoplasmic and Nuclear/metabolism , Xenopus Proteins/metabolism , Actin Cytoskeleton/metabolism , Actins/metabolism , Animals , Cell Nucleus/metabolism , Humans , Protein Binding , Xenopus laevis/embryology , Xenopus laevis/metabolism , Lamin B Receptor
16.
Bioessays ; 43(1): e2000181, 2021 01.
Article in English | MEDLINE | ID: mdl-33165968

ABSTRACT

During early embryonic development in several metazoans, accurate DNA replication is ensured by high number of replication origins. This guarantees rapid genome duplication coordinated with fast cell divisions. In Xenopus laevis embryos this program switches to one with a lower number of origins at a developmental stage known as mid-blastula transition (MBT) when cell cycle length increases and gene transcription starts. Consistent with this regulation, somatic nuclei replicate poorly when transferred to eggs, suggesting the existence of an epigenetic memory suppressing replication assembly origins at all available sites. Recently, it was shown that histone H1 imposes a non-permissive chromatin configuration preventing replication origin assembly on somatic nuclei. This somatic state can be erased by SSRP1, a subunit of the FACT complex. Here, we further develop the hypothesis that this novel form of epigenetic memory might impact on different areas of vertebrate biology going from nuclear reprogramming to cancer development.


Subject(s)
Histones , Replication Origin , Blastula/metabolism , Chromatin/genetics , Chromatin Assembly and Disassembly/genetics , DNA Replication/genetics , DNA-Binding Proteins/metabolism , Epigenesis, Genetic/genetics , Female , High Mobility Group Proteins , Histones/genetics , Histones/metabolism , Humans , Pregnancy , Transcriptional Elongation Factors
17.
Curr Top Dev Biol ; 140: 391-427, 2020.
Article in English | MEDLINE | ID: mdl-32591082

ABSTRACT

Gastrulation is a critical early morphogenetic process of animal development, during which the three germ layers; mesoderm, endoderm and ectoderm, are rearranged by internalization movements. Concurrent epiboly movements spread and thin the germ layers while convergence and extension movements shape them into an anteroposteriorly elongated body with head, trunk, tail and organ rudiments. In zebrafish, gastrulation follows the proliferative and inductive events that establish the embryonic and extraembryonic tissues and the embryonic axis. Specification of these tissues and embryonic axes are controlled by the maternal gene products deposited in the egg. These early maternally controlled processes need to generate sufficient cell numbers and establish the embryonic polarity to ensure normal gastrulation. Subsequently, after activation of the zygotic genome, the zygotic gene products govern mesoderm and endoderm induction and germ layer patterning. Gastrulation is initiated during the maternal-to-zygotic transition, a process that entails both activation of the zygotic genome and downregulation of the maternal transcripts. Genomic studies indicate that gastrulation is largely controlled by the zygotic genome. Nonetheless, genetic studies that investigate the relative contributions of maternal and zygotic gene function by comparing zygotic, maternal and maternal zygotic mutant phenotypes, reveal significant contribution of maternal gene products, transcripts and/or proteins, that persist through gastrulation, to the control of gastrulation movements. Therefore, in zebrafish, the maternally expressed gene products not only set the stage for, but they also actively participate in gastrulation morphogenesis.


Subject(s)
Embryo, Nonmammalian/metabolism , Gastrulation/genetics , Gene Expression Regulation, Developmental , Morphogenesis/genetics , Zebrafish/genetics , Animals , Blastoderm/cytology , Blastoderm/metabolism , Blastula/cytology , Blastula/metabolism , Embryo, Nonmammalian/cytology , Embryo, Nonmammalian/embryology , Maternal Inheritance/genetics , Zebrafish/embryology , Zygote/cytology , Zygote/metabolism
18.
Cell Cycle ; 19(14): 1817-1832, 2020 07.
Article in English | MEDLINE | ID: mdl-32573322

ABSTRACT

Polo-like kinase 1 (Plk1) is a cell cycle kinase essential for mitosis progression, but also important for checkpoint recovery and adaptation in response to DNA damage and replication stress. However, although Plk1 is expressed in S phase, little is known about its function during unperturbed DNA replication. Using Xenopus laevis egg extracts, mimicking early embryonic replication, we demonstrate that Plk1 is simultaneously recruited to chromatin with pre-replication proteins where it accumulates throughout S phase. Further, we found that chromatin-bound Plk1 is phosphorylated on its activating site T201, which appears to be sensitive to dephosphorylation by protein phosphatase 2A. Extracts immunodepleted of Plk1 showed a decrease in DNA replication, rescued by wild type recombinant Plk1. Inversely, modest Plk1 overexpression accelerated DNA replication. Plk1 depletion led to an increase in Chk1 phosphorylation and to a decrease in Cdk2 activity, which strongly suggests that Plk1 could inhibit the ATR/Chk1-dependent intra-S phase checkpoint during normal S phase. In addition, we observed that phosphorylated Plk1 levels are high during the rapid, early cell cycles of Xenopus development but decrease after the mid-blastula transition when the cell cycle and the replication program slow down along with more active checkpoints. These data shed new light on the role of Plk1 as a positive regulating factor for DNA replication in early, rapidly dividing embryos.


Subject(s)
Cell Cycle Proteins/metabolism , DNA Replication , Protein Serine-Threonine Kinases/metabolism , Proto-Oncogene Proteins/metabolism , Xenopus laevis/metabolism , Animals , Blastula/metabolism , Chromatin/metabolism , Cyclin-Dependent Kinase 2/metabolism , Multiprotein Complexes/metabolism , Phosphorylation , Phosphoserine/metabolism , Phosphothreonine/metabolism , Protein Phosphatase 2/metabolism , S Phase , Stress, Physiological , Polo-Like Kinase 1
19.
Nat Cell Biol ; 22(7): 803-814, 2020 07.
Article in English | MEDLINE | ID: mdl-32572169

ABSTRACT

Cell shape is controlled by the submembranous cortex, an actomyosin network mainly generated by two actin nucleators: the Arp2/3 complex and the formin mDia1. Changes in relative nucleator activity may alter cortical organization, mechanics and cell shape. Here we investigate how nucleation-promoting factors mediate interactions between nucleators. In vitro, the nucleation-promoting factor SPIN90 promotes formation of unbranched filaments by Arp2/3, a process thought to provide the initial filament for generation of dendritic networks. Paradoxically, in cells, SPIN90 appears to favour a formin-dominated cortex. Our in vitro experiments reveal that this feature stems mainly from two mechanisms: efficient recruitment of mDia1 to SPIN90-Arp2/3 nucleated filaments and formation of a ternary SPIN90-Arp2/3-mDia1 complex that greatly enhances filament nucleation. Both mechanisms yield rapidly elongating filaments with mDia1 at their barbed ends and SPIN90-Arp2/3 at their pointed ends. Thus, in networks, SPIN90 lowers branching densities and increases the proportion of long filaments elongated by mDia1.


Subject(s)
Actin Cytoskeleton/physiology , Actin-Related Protein 2-3 Complex/metabolism , Actins/metabolism , Adaptor Proteins, Signal Transducing/metabolism , Formins/metabolism , Melanoma/pathology , Muscle Proteins/metabolism , Actin-Related Protein 2-3 Complex/genetics , Adaptor Proteins, Signal Transducing/genetics , Animals , Blastula/cytology , Blastula/metabolism , Cell Shape , Embryo, Nonmammalian/cytology , Embryo, Nonmammalian/metabolism , Formins/genetics , Humans , Melanoma/genetics , Melanoma/metabolism , Muscle Proteins/genetics , Xenopus laevis/growth & development , Xenopus laevis/metabolism
20.
PLoS Genet ; 16(4): e1008652, 2020 04.
Article in English | MEDLINE | ID: mdl-32267837

ABSTRACT

Forward genetic screens remain at the forefront of biology as an unbiased approach for discovering and elucidating gene function at the organismal and molecular level. Past mutagenesis screens targeting maternal-effect genes identified a broad spectrum of phenotypes ranging from defects in oocyte development to embryonic patterning. However, earlier vertebrate screens did not reach saturation, anticipated classes of phenotypes were not uncovered, and technological limitations made it difficult to pinpoint the causal gene. In this study, we performed a chemically-induced maternal-effect mutagenesis screen in zebrafish and identified eight distinct mutants specifically affecting the cleavage stage of development and one cleavage stage mutant that is also male sterile. The cleavage-stage phenotypes fell into three separate classes: developmental arrest proximal to the mid blastula transition (MBT), irregular cleavage, and cytokinesis mutants. We mapped each mutation to narrow genetic intervals and determined the molecular basis for two of the developmental arrest mutants, and a mutation causing male sterility and a maternal-effect mutant phenotype. One developmental arrest mutant gene encodes a maternal specific Stem Loop Binding Protein, which is required to maintain maternal histone levels. The other developmental arrest mutant encodes a maternal-specific subunit of the Minichromosome Maintenance Protein Complex, which is essential for maintaining normal chromosome integrity in the early blastomeres. Finally, we identify a hypomorphic allele of Polo-like kinase-1 (Plk-1), which results in a male sterile and maternal-effect phenotype. Collectively, these mutants expand our molecular-genetic understanding of the maternal regulation of early embryonic development in vertebrates.


Subject(s)
Cell Division/genetics , Embryonic Development/genetics , Maternal Inheritance/genetics , Mutation , Zebrafish/embryology , Zebrafish/genetics , Alleles , Animals , Blastula/cytology , Blastula/embryology , Blastula/metabolism , Body Patterning/genetics , Cell Nucleus , Cytokinesis/genetics , Female , Infertility, Male/genetics , Male , Mutagenesis , Phenotype , Zebrafish Proteins/genetics
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