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1.
BMC Infect Dis ; 24(1): 808, 2024 Aug 09.
Article in English | MEDLINE | ID: mdl-39123104

ABSTRACT

BACKGROUND: Campylobacter spp. is a significant etiological agent of bacterial gastroenteritis globally. In Burkina Faso (BFA), the actual impact of this pathogen on gastroenteritis is considerably underestimated, primarily due to inadequate surveillance systems. OBJECTIVES: This study aimed to investigate the proportion of Campylobacter species responsible for acute gastroenteritis among patients of all ages in urban and rural areas of BFA, using molecular biology techniques. STUDY DESIGN & METHODS: Between 2018 and 2021, faecal specimens were obtained from 1,295 individuals presenting with acute gastroenteritis. These samples underwent screening for the Campylobacter coli/jejuni/lari complex utilizing real-time polymerase chain reaction (PCR) assays. Subsequently, positive samples were subjected to species-level differentiation through the application of species-specific primers. RESULTS: Campylobacter spp. was detected in 25.0% (324/1,295) of the samples analysed. The majority of positive samples (95%, 308/324) were obtained from children under 5 years of age. Species identification was performed on a subset of 114 isolates, revealing 51 Campylobacter jejuni, 10 Campylobacter coli, and 53 Campylobacter isolates that remained unspeciated. CONCLUSIONS: This study reveals a significant prevalence of Campylobacter species among patients with acute gastroenteritis, with a particularly high incidence observed in children under 5 years of age. Based on these findings, the implementation of routine Campylobacter surveillance in public health laboratories is strongly recommended to better monitor and address this health concern.


Subject(s)
Campylobacter Infections , Campylobacter , Feces , Humans , Burkina Faso/epidemiology , Campylobacter Infections/epidemiology , Campylobacter Infections/microbiology , Child, Preschool , Infant , Campylobacter/isolation & purification , Campylobacter/genetics , Campylobacter/classification , Female , Male , Child , Adult , Adolescent , Feces/microbiology , Young Adult , Middle Aged , Gastroenteritis/microbiology , Gastroenteritis/epidemiology , Prevalence , Infant, Newborn , Campylobacter jejuni/isolation & purification , Campylobacter jejuni/genetics , Campylobacter jejuni/classification , Aged , Enteritis/microbiology , Enteritis/epidemiology , Acute Disease , Incidence
2.
Biomed Res Int ; 2024: 4631351, 2024.
Article in English | MEDLINE | ID: mdl-39166218

ABSTRACT

Campylobacter is a zoonotic foodborne pathogen that is often linked with gastroenteritis and other extraintestinal infections in humans. This study is aimed at determining the genetic determinants of virulence-encoding genes responsible for flagellin motility protein A (flaA), Campylobacter adhesion to fibronectin F (cadF), Campylobacter invasion antigen B (ciaB) and cytolethal distending toxin (cdt) A (cdtA) in Campylobacter species. A total of 29 Campylobacter coli isolates (16 from cattle, 9 from chicken, and 4 from water samples) and 74 Campylobacter jejuni isolates (38 from cattle, 30 from chicken, and 6 from water samples) described in an earlier study in Kajiado County, Kenya, were examined for the occurrence of virulence-associated genes using polymerase chain reaction (PCR) and amplicon sequencing. The correlations among virulence genes were analyzed using Pearson's correlation coefficient (R) method. Among the 103 Campylobacter strains screened, 89 were found to harbour a single or multiple virulence gene(s), giving an overall prevalence of 86.4%. C. jejuni strains had the highest prevalence of multivirulence at 64.9% (48/74), compared to C. coli (58.6%, 17/29). The ciaB and flaA genes were the most common virulence genes detected in C. jejuni (81.1% [60/74] and 62.2% [46/74], respectively) and in C. coli (each at 62.1%; 18/29). Campylobacter isolates from chicken harboured the most virulence-encoding genes. C. jejuni strains from chicken and cattle harboured the highest proportions of the cdtA and ciaB genes, respectively. All the C. coli strains from water samples harboured the cadF and flaA genes. The results obtained further revealed a significant positive correlation between cadF and flaA (R = 0.733). C. jejuni and C. coli strains from cattle, chicken, and water harbour virulence markers responsible for motility/colonization, invasion, adherence, and toxin production, evoking their important role in campylobacteriosis development among humans and livestock. The identification of cattle, chicken, and water samples as reservoirs of virulent Campylobacter spp. highlights the possible risk to human health. These data on some virulence genes of Campylobacter will assist food safety and public health officials in formulating policy statements.


Subject(s)
Campylobacter coli , Campylobacter jejuni , Chickens , Feces , Animals , Campylobacter jejuni/genetics , Campylobacter jejuni/pathogenicity , Campylobacter jejuni/isolation & purification , Chickens/microbiology , Cattle , Campylobacter coli/genetics , Campylobacter coli/pathogenicity , Campylobacter coli/isolation & purification , Virulence/genetics , Feces/microbiology , Kenya/epidemiology , Virulence Factors/genetics , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Water Microbiology , Flagellin/genetics , Humans , Bacterial Proteins/genetics
3.
Epidemiol Infect ; 152: e101, 2024 Aug 22.
Article in English | MEDLINE | ID: mdl-39168635

ABSTRACT

Campylobacter spp. are leading bacterial gastroenteritis pathogens. Infections are largely underreported, and the burden of outbreaks may be underestimated. Current strategies of testing as few as one isolate per sample can affect attribution of cases to epidemiologically important sources with high Campylobacter diversity, such as chicken meat. Multiple culture method combinations were utilized to recover and sequence Campylobacter from 45 retail chicken samples purchased across Norwich, UK, selecting up to 48 isolates per sample. Simulations based on resampling were used to assess the impact of Campylobacter sequence type (ST) diversity on outbreak detection. Campylobacter was recovered from 39 samples (87%), although only one sample was positive through all broth, temperature, and plate combinations. Three species were identified (Campylobacter jejuni, Campylobacter coli, and Campylobacter lari), and 33% of samples contained two species. Positive samples contained 1-8 STs. Simulation revealed that up to 87 isolates per sample would be required to detect 95% of the observed ST diversity, and 26 isolates would be required for the average probability of detecting a random theoretical outbreak ST to reach 95%. An optimized culture approach and selecting multiple isolates per sample are essential for more complete Campylobacter recovery to support outbreak investigation and source attribution.


Subject(s)
Campylobacter , Chickens , Chickens/microbiology , Animals , Campylobacter/isolation & purification , Campylobacter/genetics , Campylobacter/classification , Campylobacter Infections/epidemiology , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Campylobacter jejuni/isolation & purification , Campylobacter jejuni/genetics , Campylobacter coli/isolation & purification , Campylobacter coli/genetics , Food Microbiology , Disease Outbreaks , United Kingdom/epidemiology , Meat/microbiology , Genetic Variation , Campylobacter lari/genetics , Campylobacter lari/isolation & purification
4.
Trop Biomed ; 41(2): 206-208, 2024 Jun 01.
Article in English | MEDLINE | ID: mdl-39154274

ABSTRACT

Globally, Campylobacter spp. are responsible for most cases of bacterial gastrointestinal infections in humans and although rare, extraintestinal Campylobacter infections have been described. A 2-yearold neutropenic girl with underlying precursor B-cell acute lymphoblastic leukemia presented with a 3-day history of diarrhea. Her stool culture yielded no enteric bacterial pathogens. However, when her blood culture was flagged as positive for bacterial growth, no colonies could be observed on routine bacteriological isolation media. Nonetheless, gram-negative bacilli with seagull and spiral morphologies were seen when the surface of the isolation media used to subculture her blood was Gram-stained. Bacterial colonies were only visible when a subculture was attempted on a Campylobacter blood-free selective agar medium. The organism was identified as Campylobacter jejuni by matrix-assisted laser desorption ionization-time of flight mass spectrometry. Since the organism was erythromycin-resistant and the patient's age precluded the use of tetracycline and ciprofloxacin, an antibiotic regimen consisting of piperacillin-tazobactam and gentamicin was commenced. Her C. jejuni bacteremia resolved following eight days of antibiotic therapy.


Subject(s)
Anti-Bacterial Agents , Bacteremia , Campylobacter Infections , Campylobacter jejuni , Humans , Female , Bacteremia/microbiology , Bacteremia/drug therapy , Bacteremia/diagnosis , Campylobacter jejuni/isolation & purification , Campylobacter Infections/drug therapy , Campylobacter Infections/microbiology , Campylobacter Infections/diagnosis , Anti-Bacterial Agents/therapeutic use , Child, Preschool , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/diagnosis , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/drug therapy
5.
Acta Vet Scand ; 66(1): 38, 2024 Aug 13.
Article in English | MEDLINE | ID: mdl-39138525

ABSTRACT

BACKGROUND: Preventing pathogens from entering the broiler premises is the main biosecurity measure at farm level. In conventional broiler production, chickens are kept indoors during the entire production period. Pathogens can enter the broiler-producing unit from sources such as water, equipment, personnel, insects, and rodents. The possible routes must be controlled, and corrective measures applied when necessary. The objective of this study was to (1) develop a hygiene protocol and test the scheme on 30 farms, and (2) compare the results to their Campylobacter-colonised status. A Hygiene Performance Rating protocol at farm level (HPR-F) was developed to systematically review the production to identify risk areas to biosecurity. The HPR-F consists of 13 categories with related questions. For each question, a score was given from 1 to 3, where 1 meant "acceptable", 2 was "potential for improvements", and 3 was "not acceptable". Scores for each question were multiplied with weight factors for hygienic impact and economic consequences describing whether the necessary improvement depends on a significant investment or is a cheap quick-fix and calculated into a percentage where 100% is perfect hygiene. The 30 farms in the study were selected from one county in Norway. The Campylobacter-results for each of the 30 farms in 2019-2021 were given according to rules in the Norwegian Action Plan against Campylobacter faecal sampling on-farm 3-6 days prior to slaughter. RESULTS: The overall results from the HPR-F showed that the general hygiene level was high in all farms. The mean total hygiene score was 82% and varied from 70 to 92%. The category Handling dead chicken had the highest hygiene score (93%), and Ventilation had the lowest score (55%). The HPR-F results were compared to the Campylobacter-status for the 30 farms: Campylobacter-negative flocks had slightly higher total scores than Campylobacter-positive flocks (P = 0.19). Among others, the category Outdoor area (vegetation close to the premises' walls) was identified as the most stable factor in relation to be colonised with Campylobacter. CONCLUSIONS: The HPR-F tested in this research trial provides a tool for veterinarians, advisors, and poultry farmers to improve biosecurity at farm level and enhance the preventive animal health initiatives.


Subject(s)
Animal Husbandry , Campylobacter Infections , Campylobacter , Chickens , Farms , Hygiene , Poultry Diseases , Animals , Poultry Diseases/prevention & control , Poultry Diseases/microbiology , Poultry Diseases/epidemiology , Campylobacter/isolation & purification , Campylobacter Infections/veterinary , Campylobacter Infections/prevention & control , Campylobacter Infections/epidemiology , Campylobacter Infections/microbiology , Animal Husbandry/methods , Hygiene/standards , Prevalence , Norway/epidemiology
6.
BMC Microbiol ; 24(1): 306, 2024 Aug 16.
Article in English | MEDLINE | ID: mdl-39152378

ABSTRACT

BACKGROUND: Deoxynivalenol (DON) is a type B trichothecene mycotoxin that is commonly found in cereals and grains worldwide. The presence of this fungal secondary-metabolite raises public-health concerns at both the agriculture and food industry level. Recently, we have shown that DON has a negative impact on gut integrity, a feature also noticed for Campylobacter (C.) jejuni. We further demonstrated that DON increased the load of C. jejuni in the gut and inner organs. In contrast, feeding the less toxic DON metabolite deepoxy-deoxynivalenol (DOM-1) to broilers reduced the Campylobacter load in vivo. Consequently, it can be hypothesized that DON and DOM-1 have a direct effect on the growth profile of C. jejuni. The aim of the present study was to further resolve the nature of this interaction in vitro by co-incubation and RNA-sequencing. RESULTS: The co-incubation of C. jejuni with DON resulted in significantly higher bacterial growth rates from 30 h of incubation onwards. On the contrary, the co-incubation of C. jejuni with DOM-1 reduced the CFU counts, indicating that this DON metabolite might contribute to reduce the burden of C. jejuni in birds, altogether confirming in vivo data. Furthermore, the transcriptomic profile of C. jejuni following incubation with either DON or DOM-1 differed. Co-incubation of C. jejuni with DON significantly increased the expression of multiple genes which are critical for Campylobacter growth, particularly members of the Flagella gene family, frr (ribosome-recycling factor), PBP2 futA-like (Fe3+ periplasmic binding family) and PotA (ATP-binding subunit). Flagella are responsible for motility, biofilm formation and host colonization, which may explain the high Campylobacter load in the gut of DON-fed broiler chickens. On the contrary, DOM-1 downregulated the Flagella gene family and upregulated ribosomal proteins. CONCLUSION: The results highlight the adaptive mechanisms involved in the transcriptional response of C. jejuni to DON and its metabolite DOM-1, based on the following effects: (a) ribosomal proteins; (b) flagellar proteins; (c) engagement of different metabolic pathways. The results provide insight into the response of an important intestinal microbial pathogen against DON and lead to a better understanding of the luminal or environmental acclimation mechanisms in chickens.


Subject(s)
Campylobacter jejuni , Chickens , Transcriptome , Trichothecenes , Trichothecenes/metabolism , Campylobacter jejuni/drug effects , Campylobacter jejuni/genetics , Campylobacter jejuni/growth & development , Campylobacter jejuni/metabolism , Animals , Transcriptome/drug effects , Chickens/microbiology , Gene Expression Regulation, Bacterial/drug effects , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Animal Feed/microbiology
7.
Microb Genom ; 10(8)2024 Aug.
Article in English | MEDLINE | ID: mdl-39213166

ABSTRACT

Campylobacter is the leading bacterial cause of infectious intestinal disease, but the pathogen typically accounts for a very small proportion of the overall stool microbiome in each patient. Diagnosis is even more difficult due to the fastidious nature of Campylobacter in the laboratory setting. This has, in part, driven a change in recent years, from culture-based to rapid PCR-based diagnostic assays which have improved diagnostic detection, whilst creating a knowledge gap in our clinical and epidemiological understanding of Campylobacter genotypes - no isolates to sequence. In this study, direct metagenomic sequencing approaches were used to assess the possibility of replacing genome sequences with metagenome sequences; metagenomic sequencing outputs were used to describe clinically relevant attributes of Campylobacter genotypes. A total of 37 diarrhoeal stool samples with Campylobacter and five samples with an unknown pathogen result were collected and processed with and without filtration, DNA was extracted, and metagenomes were sequenced by short-read sequencing. Culture-based methods were used to validate Campylobacter metagenome-derived genome (MDG) results. Sequence output metrics were assessed for Campylobacter genome quality and accuracy of characterization. Of the 42 samples passing quality checks for analysis, identification of Campylobacter to the genus and species level was dependent on Campylobacter genome read count, coverage and genome completeness. A total of 65% (24/37) of samples were reliably identified to the genus level through Campylobacter MDG, 73% (27/37) by culture and 97% (36/37) by qPCR. The Campylobacter genomes with a genome completeness of over 60% (n=21) were all accurately identified at the species level (100%). Of those, 72% (15/21) were identified to sequence types (STs), and 95% (20/21) accurately identified antimicrobial resistance (AMR) gene determinants. Filtration of stool samples enhanced Campylobacter MDG recovery and genome quality metrics compared to the corresponding unfiltered samples, which improved the identification of STs and AMR profiles. The phylogenetic analysis in this study demonstrated the clustering of the metagenome-derived with culture-derived genomes and revealed the reliability of genomes from direct stool sequencing. Furthermore, Campylobacter genome spiking percentages ranging from 0 to 2% total metagenome abundance in the ONT MinION sequencer, configured to adaptive sequencing, exhibited better assembly quality and accurate identification of STs, particularly in the analysis of metagenomes containing 2 and 1% of Campylobacter jejuni genomes. Direct sequencing of Campylobacter from stool samples provides clinically relevant and epidemiologically important genomic information without the reliance on cultured genomes.


Subject(s)
Campylobacter Infections , Campylobacter , Feces , Whole Genome Sequencing , Feces/microbiology , Humans , Campylobacter/genetics , Campylobacter/isolation & purification , Campylobacter/classification , Whole Genome Sequencing/methods , Campylobacter Infections/microbiology , Genome, Bacterial , Metagenome , Metagenomics/methods , Diarrhea/microbiology , Phylogeny
8.
PLoS One ; 19(8): e0305581, 2024.
Article in English | MEDLINE | ID: mdl-39159178

ABSTRACT

Campylobacteriosis outbreaks have previously been linked to dairy foods. While the genetic diversity of Campylobacter is well understood in high-income countries, it is largely unknown in low-income countries, such as Ethiopia. This study therefore aimed to conduct the first genomic characterization of Campylobacter isolates from the Ethiopian dairy supply chain to aid in future epidemiological studies. Fourteen C. jejuni and four C. coli isolates were whole genome sequenced using an Illumina platform. Sequences were analyzed using the bioinformatics tools in the GalaxyTrakr platform to identify MLST types, and single nucleotide polymorphisms, and infer phylogenetic relationships among the studied isolates. Assembled genomes were further screened to detect antimicrobial resistance and virulence gene sequences. Among 14 C. jejuni, ST 2084 and ST 51, which belong to the clonal complexes ST-353 and ST-443, respectively, were identified. Among the 4 sequenced C. coli isolates, two isolates belonged to ST 1628 and two to ST 830 from the clonal complex ST-828. The isolates of C. jejuni ST 2084 and ST 51 carried ß-lactam resistance gene blaOXA-605, a fluoroquinolone resistance-associated mutation T86I in the gryA gene, and a macrolide resistance-associated mutation A103V in 50S L22. Only ST 2084 isolates carried the tetracycline resistance gene tetO. Conversely, all four C. coli ST 830 and ST 1628 isolates carried tetO, but only ST 1628 isolates also carried blaOXA-605. Lastly, C. jejuni ST 2084 isolates carried a total of 89 virulence genes, and ST 51 isolates carried up to 88 virulence genes. Among C. coli, ST 830 isolates carried 71 genes involved in virulence, whereas two ST 1628 isolates carried up to 82 genes involved in virulence. Isolates from all identified STs have previously been isolated from human clinical cases, demonstrating a potential food safety concern. This finding warrants further monitoring of Campylobacter in dairy foods in Ethiopia to better understand and manage the risks associated with Campylobacter contamination and transmission.


Subject(s)
Campylobacter coli , Campylobacter jejuni , Genetic Variation , Phylogeny , Campylobacter coli/genetics , Campylobacter coli/isolation & purification , Campylobacter coli/drug effects , Campylobacter coli/pathogenicity , Campylobacter jejuni/genetics , Campylobacter jejuni/isolation & purification , Campylobacter jejuni/pathogenicity , Ethiopia/epidemiology , Campylobacter Infections/microbiology , Campylobacter Infections/epidemiology , Dairy Products/microbiology , Genome, Bacterial/genetics , Whole Genome Sequencing , Polymorphism, Single Nucleotide , Food Microbiology , Anti-Bacterial Agents/pharmacology , Humans , Multilocus Sequence Typing , Virulence/genetics , Drug Resistance, Bacterial/genetics , Animals
9.
PLoS One ; 19(7): e0304409, 2024.
Article in English | MEDLINE | ID: mdl-38959220

ABSTRACT

BACKGROUND: Children with under-five year age disproportionally affected with foodborne illness. Campylobacteriosis is the most common foodborne disease next to Norovirus infection. Macrolides are commonly prescribed as the first line of treatment for Campylobacter gastroenteritis, with fluoroquinolone and tetracycline as secondary options. However, resistance to these alternatives has been reported in various regions worldwide. OBJECTIVE: To determine the prevalence, associated risk-factors and antimicrobial resistance of Campylobacter jejuni and C. coli among under-five children with diarrhea. METHODS: Institution-based cross-sectional study was conducted from November, 2022 to April 2023. The study sites were selected using a random sampling technique, while the study subjects were included using a convenient sampling technique. The data were collected using a structured questionnaire. Stool samples were inoculated onto modified charcoal cefoperazone deoxycholate agar and incubated for 48 hours. The suspected colonies were analyzed using matrix-assisted laser desorption ionization-time of flight mass spectrometry to confirm the species. Antimicrobial susceptibility testing was performed using a disc diffusion technique. All potential covariates (independent variables) were analyzed one by one using bivariate logistic regression model to identify candidate variables with P value < 0.25. Multivariable logistic analysis was used to identify potential associated factors using the candidate variables. A p value ≤ 0.05 at a 95% confidence interval was statistically significant. RESULT: Among the 428 samples, 7.0% (CI: 4.5-9.3) were confirmed Campylobacter species. The prevalence of C. jejuni and C. coli among under-five children was 5.1% (CI: 3.0-7.0) and 1.9% (CI: 0.7-3.3), respectively. C. jejuni (73.3%) was dominant over C. coli (26.7%). The resident, contact with domestic animals, and parents/guardians education level were significantly associated with campylobacteriosis among under-five children. One-third of the Campylobacter isolates (33.3%, 10/30) were resistant to ciprofloxacin and tetracycline whereas 10.0% (3/30) were resistant to erythromycin. Furthermore, 3.3% (1/30) of the Campylobacter were found to be multidrug-resistant. CONCLUSION: The prevalence of Campylobacter species was 7.0%. The resistance rate of Campylobacter species of ciprofloxacin and tetracycline-resistance strains was 33.3%. Peri-urban residence, contact with domestic animals, and low parental educational statuses were significantly associated factors with increased risk of Campylobacter infection. Continuous surveillance on antimicrobial resistance and health education of personal and environmental hygiene should be implemented in the community.


Subject(s)
Anti-Bacterial Agents , Campylobacter Infections , Campylobacter coli , Campylobacter jejuni , Diarrhea , Humans , Campylobacter jejuni/drug effects , Campylobacter jejuni/isolation & purification , Campylobacter coli/drug effects , Campylobacter coli/isolation & purification , Campylobacter Infections/epidemiology , Campylobacter Infections/drug therapy , Campylobacter Infections/microbiology , Child, Preschool , Infant , Female , Male , Diarrhea/epidemiology , Diarrhea/microbiology , Diarrhea/drug therapy , Ethiopia/epidemiology , Cross-Sectional Studies , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Drug Resistance, Bacterial , Prevalence , Microbial Sensitivity Tests , Infant, Newborn , Risk Factors
10.
J Public Health Manag Pract ; 30(5): 718-727, 2024.
Article in English | MEDLINE | ID: mdl-39041766

ABSTRACT

CONTEXT: Routine case investigations are critical for enteric disease control and surveillance. Given limited resources and staffing, public health agencies are exploring more efficient case investigation methods. OBJECTIVE: To identify and describe the advantages and disadvantages of using online surveys to supplement routine enteric disease case investigations. DESIGN: We evaluated routine Campylobacter interview data collected via telephone vs online by interviewers with the Colorado Department of Public Health and Environment. SETTING AND PARTICIPATION: Colorado laboratory-confirmed Campylobacter cases reported from September 1, 2020, through December 31, 2021. MAIN OUTCOME MEASURES: We calculated modality preference, response rates, and data quality (missing and unknown answers) and compared demographics (age, gender, and urban vs rural) by modality. Estimated staff time savings and investigation timeliness were compared. RESULTS: Modality preference was split among the 966 contacted Campylobacter cases (46% telephone, 50% online, and 4% refusal). Among online respondents, 57% completed the survey for an overall 63% response rate. Females and those 18 to 44 years of age were most likely to select (55%, 60%) and complete (57%, 66%) the online survey, while those under 18 and over 65 years of age were least likely to select (47%, 45%) or complete (53%, 46%). Those who identified as non-Hispanic Black were most likely to select online (62%), whereas those who identified as mixed-race non-Hispanic and non-Hispanic White had the highest completion (78%, 60%). Modality preference was comparable by geography; however, rural residents had higher completion rates (61%). Data quality and completeness were comparable between modalities. Completing the 274 online surveys via telephone would have taken an estimated 78 hours of additional staff time. CONCLUSIONS: Online surveys can increase public health efficiency and capacity while maintaining data quality. However, use should be limited to high-burden, low-resource pathogens due to reduced response rates. Understanding implementation best practices and conducting regular evaluation are critical for optimization.


Subject(s)
Campylobacter Infections , Campylobacter , Humans , Colorado/epidemiology , Female , Male , Adult , Middle Aged , Adolescent , Campylobacter Infections/epidemiology , Aged , Surveys and Questionnaires , Campylobacter/isolation & purification , Internet , Child
11.
Microb Genom ; 10(7)2024 Jul.
Article in English | MEDLINE | ID: mdl-39028633

ABSTRACT

Consumption of raw, undercooked or contaminated animal food products is a frequent cause of Campylobacter jejuni infection. Brazil is the world's third largest producer and a major exporter of chicken meat, yet population-level genomic investigations of C. jejuni in the country remain scarce. Analysis of 221 C. jejuni genomes from Brazil shows that the overall core and accessory genomic features of C. jejuni are influenced by the identity of the human or animal source. Of the 60 sequence types detected, ST353 is the most prevalent and consists of samples from chicken and human sources. Notably, we identified the presence of diverse bla genes from the OXA-61 and OXA-184 families that confer beta-lactam resistance as well as the operon cmeABCR related to multidrug efflux pump, which contributes to resistance against tetracyclines, macrolides and quinolones. Based on limited data, we estimated the most recent common ancestor of ST353 to the late 1500s, coinciding with the time the Portuguese first arrived in Brazil and introduced domesticated chickens into the country. We identified at least two instances of ancestral chicken-to-human infections in ST353. The evolution of C. jejuni in Brazil was driven by the confluence of clinically relevant genetic elements, multi-host adaptation and clonal population growth that coincided with major socio-economic changes in poultry farming.


Subject(s)
Campylobacter jejuni , Chickens , Evolution, Molecular , Genome, Bacterial , Campylobacter jejuni/genetics , Campylobacter jejuni/drug effects , Campylobacter jejuni/isolation & purification , Campylobacter jejuni/classification , Brazil , Animals , Chickens/microbiology , Humans , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Host Adaptation/genetics , Anti-Bacterial Agents/pharmacology , Drug Resistance, Multiple, Bacterial/genetics , Phylogeny
12.
Appl Environ Microbiol ; 90(8): e0084524, 2024 Aug 21.
Article in English | MEDLINE | ID: mdl-39078127

ABSTRACT

Campylobacter jejuni (C. jejuni) is one of the most common causes of foodborne infections worldwide and a major contributor to diarrheal diseases. This study aimed to explore the ability of commensal gut bacteria to control C. jejuni infection. Bacterial strains from the intestinal mucosa of broilers were screened in vitro against C. jejuni ATCC BAA1153. The cell-free supernatant (CFS) of Ligilactobacillus salivarius UO.C249 showed potent dose-dependent antimicrobial activity against the pathogen, likely due to the presence of bacteriocin-like moieties, as confirmed by protease treatment. Genome and exoproteome analyses revealed the presence of known bacteriocins, including Abp118. The genome of Lg. salivarius UO.C249 harbors a 1.8-Mb chromosome and a 203-kb megaplasmid. The strain was susceptible to several antibiotics and had a high survival rate in the simulated chicken gastrointestinal tract (GIT). Post-protease treatment revealed residual inhibitory activity, suggesting alternative antimicrobial mechanisms. Short-chain fatty acid (SCFA) quantification confirmed non-inhibitory levels of acetic (24.4 ± 1.2 mM), isovaleric (34 ± 1.0 µM), and butyric (32 ± 2.5 µM) acids. Interestingly, extracellular vesicles (EVs) isolated from the CFS of Lg. salivarius UO.C249 were found to inhibit C. jejuni ATCC BAA-1153. Proteome profiling of these EVs revealed the presence of unique proteins distinct from bacteriocins identified in CFS. The majority of the identified proteins in EVs are located in the membrane and play roles in transmembrane transport and peptidoglycan degradation, peptidase, proteolysis, and hydrolysis. These findings suggest that although bacteriocins are a primary antimicrobial mechanism, EV production also contributes to the inhibitory activity of Lg. salivarius UO.C249 against C. jejuni. IMPORTANCE: Campylobacter jejuni (C. jejuni) is a major cause of gastroenteritis and a global public health concern. The increasing antibiotic resistance and lack of effective alternatives in livestock production pose serious challenges for controlling C. jejuni infections. Therefore, alternative strategies are needed to control this pathogen, especially in the poultry industry where it is prevalent and can be transmitted to humans through contaminated food products. In this study, Ligilactobacillus salivarius UO.C249 isolated from broiler intestinal mucosa inhibited C. jejuni and exhibited important probiotic features. Beyond bacteriocins, Lg. salivarius UO.C249 secretes antimicrobial extracellular vesicles (EVs) with a unique protein set distinct from bacteriocins that are involved in transmembrane transport and peptidoglycan degradation. Our findings suggest that beyond bacteriocins, EV production is also a distinct inhibitory signaling mechanism used by Lg. salivarius UO.C249 to control C. jejuni. These findings hold promise for the application of probiotic EVs for pathogen control.


Subject(s)
Bacteriocins , Campylobacter jejuni , Chickens , Extracellular Vesicles , Ligilactobacillus salivarius , Probiotics , Bacteriocins/pharmacology , Bacteriocins/metabolism , Bacteriocins/genetics , Probiotics/pharmacology , Campylobacter jejuni/drug effects , Campylobacter jejuni/genetics , Campylobacter jejuni/metabolism , Extracellular Vesicles/metabolism , Extracellular Vesicles/chemistry , Animals , Chickens/microbiology , Ligilactobacillus salivarius/physiology , Anti-Bacterial Agents/pharmacology , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Campylobacter Infections/prevention & control
13.
Zoonoses Public Health ; 71(6): 755-762, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38982628

ABSTRACT

AIMS: Campylobacteriosis, caused by Campylobacter spp., is one of the most important foodborne zoonotic diseases in the world and a common cause of gastroenteritis. In the European Union, campylobacteriosis is considered the most common zoonotic disease, with over 10,000 cases in 2020 alone. This high occurrence highlights the need of more efficient surveillance methods and identification of key points. METHODS AND RESULTS: Herein, we evaluated and identified key points of Campylobacter spp. occurrence along the Spanish food chain during 2015-2020, based on the following variables: product, stage and region. We analysed a dataset provided by the Spanish Agency for Food Safety and Nutrition using a machine learning algorithm (random forests). Campylobacter presence was influenced by the three selected explanatory variables, especially by product, followed by region and stage. Among the studied products, meat, especially poultry and sheep, presented the highest probability of occurrence of Campylobacter, where the bacterium was present in the initial, intermediate and final stages (e.g., wholesale, retail) of the food chain. The presence in final stages may represent direct consumer exposure to the bacteria. CONCLUSSIONS: By using the random forest method, this study contributes to the identification of Campylobacter key points and the evaluation of control efforts in the Spanish food chain.


Subject(s)
Campylobacter Infections , Campylobacter , Food Microbiology , Campylobacter/isolation & purification , Spain/epidemiology , Animals , Campylobacter Infections/epidemiology , Humans , Food Chain , Meat/microbiology , Zoonoses
14.
Foodborne Pathog Dis ; 21(9): 546-559, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38957999

ABSTRACT

Goats are often asymptomatic carriers of Campylobacter, including the foodborne pathogen Campylobacter jejuni. Infections can have significant and economically detrimental health outcomes in both humans and animals. The primary objective of this study was to estimate the prevalence of Campylobacter in U.S. goat herds. Campylobacter species were isolated from 106 of 3,959 individual animals and from 42 of 277 goat operations that participated in fecal sample collection as part of the National Animal Health Monitoring System Goat 2019 study. Weighted animal-level prevalence was 2.3% (SE = 0.5%) and operation prevalence was 13.0% (SE = 3.2%). Animal-level prevalence ranged widely from 0 to 70.0%, however, 52.4% of positive operations (22/42) had only a single isolate. C. jejuni was the most frequently isolated species (68.9%; 73/106), followed by C. coli (29.3%, 31/106). A total of 46.2% (36/78) of viable isolates were pan-susceptible to 8 antimicrobials. Resistance to tetracycline (TET) was observed in 44.9% (35/78) of isolates, while 12.8% (10/78) were resistant to ciprofloxacin (CIP) and nalidixic acid (NAL). Among all isolates, a single resistance profile CIP-NAL-TET was observed in 3.8% (3/78) of isolates. A total of 35 unique sequence types (STs) were identified, 11 of which are potentially new. Multiple C. jejuni STs were observed in 48.1% (13/27) of positive operations. Goats with access to surface water, operations reporting antibiotics in the feed or water (excluding ionophores and coccidiostats), and operations reporting abortions and without postabortion management tasks had significantly greater odds of being Campylobacter positive. This snapshot of the U.S. goat population enriches the limited pool of knowledge on Campylobacter species presence in U.S. goats.


Subject(s)
Anti-Bacterial Agents , Campylobacter Infections , Campylobacter , Feces , Goat Diseases , Goats , Animals , Feces/microbiology , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Campylobacter Infections/epidemiology , United States/epidemiology , Prevalence , Campylobacter/drug effects , Campylobacter/isolation & purification , Campylobacter/classification , Anti-Bacterial Agents/pharmacology , Goat Diseases/microbiology , Goat Diseases/epidemiology , Campylobacter jejuni/drug effects , Campylobacter jejuni/isolation & purification , Microbial Sensitivity Tests , Drug Resistance, Bacterial
15.
Microb Pathog ; 194: 106810, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39029598

ABSTRACT

The study aimed to isolate and identify Aliarcobacter spp. and Campylobacter spp. from the uterine contents of cows and to determine the susceptibilities of the isolates to various antibiotics. For this purpose, a total of 63 cows (with repeat breeder, metritis, and healthy) uterine contents were collected from a slaughterhouse. Pre-enrichment and membrane filtration methods were used to isolate Aliarcobacter and Campylobacter spp., and phenotypic and molecular methods were used to identify the isolates. Antibacterial susceptibilities of the isolates were determined by the disc diffusion method. A total of 11 (17.46 %, 11/63) samples were found positive for both genera, and 12 isolates were obtained from these samples. Out of 9 Campylobacter isolates, 5, 3, and 1 were identified as C. jejuni, C. sputorum, and C. hyointestinalis, respectively. Also, two and one of Aliarcobacter spp. isolates were identified as Aliarcobacter sp. and A. butzleri, respectively. All isolates of both genera were found to be sensitive to amoxicillin-clavulanic acid, ampicillin, erythromycin, and enrofloxacin and resistant to trimethoprim + sulfamethoxazole. This is the first study that reported on the isolation of C. hyointestinalis from cattle uterine contents. It was concluded that Campylobacter and Aliarcobacter species should be considered among the most important etiological agents in uterine infections that cause infertility in cows. The isolation of Aliarcobacter and Campylobacter spp. from healthy cow uteri within the scope of this study suggests the possibility that these agents could colonize the uterus, similar to the colonization observed in the intestine and gallbladder.


Subject(s)
Anti-Bacterial Agents , Campylobacter Infections , Campylobacter , Cattle Diseases , Microbial Sensitivity Tests , Phylogeny , Uterus , Cattle , Animals , Female , Anti-Bacterial Agents/pharmacology , Campylobacter/drug effects , Campylobacter/isolation & purification , Campylobacter/genetics , Campylobacter/classification , Uterus/microbiology , Cattle Diseases/microbiology , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , RNA, Ribosomal, 16S/genetics , Drug Resistance, Bacterial , Abattoirs , DNA, Bacterial/genetics
16.
Front Immunol ; 15: 1363457, 2024.
Article in English | MEDLINE | ID: mdl-38855111

ABSTRACT

Introduction: Human infections with the food-borne enteropathogen Campylobacter jejuni are responsible for increasing incidences of acute campylobacteriosis cases worldwide. Since antibiotic treatment is usually not indicated and the severity of the enteritis directly correlates with the risk of developing serious autoimmune disease later-on, novel antibiotics-independent intervention strategies with non-toxic compounds to ameliorate and even prevent campylobacteriosis are utmost wanted. Given its known pleiotropic health-promoting properties, curcumin constitutes such a promising candidate molecule. In our actual preclinical placebo-controlled intervention trial, we tested the anti-microbial and anti-inflammatory effects of oral curcumin pretreatment during acute experimental campylobacteriosis. Methods: Therefore, secondary abiotic IL-10-/- mice were challenged with synthetic curcumin via the drinking water starting a week prior oral C. jejuni infection. To assess anti-pathogenic, clinical, immune-modulatory, and functional effects of curcumin prophylaxis, gastrointestinal C. jejuni bacteria were cultured, clinical signs and colonic histopathological changes quantitated, pro-inflammatory immune cell responses determined by in situ immunohistochemistry and intestinal, extra-intestinal and systemic pro-inflammatory mediator measurements, and finally, intestinal epithelial barrier function tested by electrophysiological resistance analysis of colonic ex vivo biopsies in the Ussing chamber. Results and discussion: Whereas placebo counterparts were suffering from severe enterocolitis characterized by wasting symptoms and bloody diarrhea on day 6 post-infection, curcumin pretreated mice, however, were clinically far less compromised and displayed less severe microscopic inflammatory sequelae such as histopathological changes and epithelial cell apoptosis in the colon. In addition, curcumin pretreatment could mitigate pro-inflammatory innate and adaptive immune responses in the intestinal tract and importantly, rescue colonic epithelial barrier integrity upon C. jejuni infection. Remarkably, the disease-mitigating effects of exogenous curcumin was also observed in organs beyond the infected intestines and strikingly, even systemically given basal hepatic, renal, and serum concentrations of pro-inflammatory mediators measured in curcumin pretreated mice on day 6 post-infection. In conclusion, the anti-Campylobacter and disease-mitigating including anti-inflammatory effects upon oral curcumin application observed here highlight the polyphenolic compound as a promising antibiotics-independent option for the prevention from severe acute campylobacteriosis and its potential post-infectious complications.


Subject(s)
Campylobacter Infections , Campylobacter jejuni , Curcumin , Animals , Curcumin/administration & dosage , Curcumin/pharmacology , Campylobacter Infections/drug therapy , Campylobacter Infections/immunology , Mice , Campylobacter jejuni/drug effects , Administration, Oral , Mice, Knockout , Disease Models, Animal , Mice, Inbred C57BL , Interleukin-10/metabolism , Acute Disease , Anti-Bacterial Agents/administration & dosage
17.
Microb Pathog ; 193: 106766, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38942248

ABSTRACT

Campylobacter jejuni is one of the major causes of bacterial gastrointestinal disease in humans worldwide. This foodborne pathogen colonizes the intestinal tracts of chickens, and consumption of chicken and poultry products is identified as a common route of transmission. We analyzed two C. jejuni strains after oral challenge with 105 CFU/ml of C. jejuni per chick; one strain was a robust colonizer (A74/C) and the other a poor colonizer (A74/O). We also found extensive phenotypic differences in growth rate, biofilm production, and in vitro adherence, invasion, intracellular survival, and transcytosis. Strains A74/C and A74/O were genotypically similar with respect to their whole genome alignment, core genome, and ribosomal MLST, MLST, flaA, porA, and PFGE typing. The global proteomes of the two congenic strains were quantitatively analyzed by ultra-high performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS) and 618 and 453 proteins were identified from A74/C and A74/O isolates, respectively. Cluster of Orthologous Groups (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses showed that carbon metabolism and motility proteins were distinctively overexpressed in strain A74/C. The robust colonizer also exhibited a unique proteome profile characterized by significantly increased expression of proteins linked to adhesion, invasion, chemotaxis, energy, protein synthesis, heat shock proteins, iron regulation, two-component regulatory systems, and multidrug efflux pump. Our study underlines phenotypic, genotypic, and proteomic variations of the poor and robust colonizing C. jejuni strains, suggesting that several factors may contribute to mediating the different colonization potentials of the isogenic isolates.


Subject(s)
Bacterial Adhesion , Bacterial Proteins , Biofilms , Campylobacter Infections , Campylobacter jejuni , Chickens , Genotype , Phenotype , Proteome , Proteomics , Campylobacter jejuni/genetics , Campylobacter jejuni/metabolism , Campylobacter jejuni/growth & development , Animals , Chickens/microbiology , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Biofilms/growth & development , Bacterial Adhesion/genetics , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Poultry Diseases/microbiology , Multilocus Sequence Typing , Tandem Mass Spectrometry , Genome, Bacterial/genetics
18.
PLoS Negl Trop Dis ; 18(6): e0012241, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38833441

ABSTRACT

Campylobacteriosis disproportionately affects children under five in low-income countries. However, epidemiological and antimicrobial resistance (AMR) information at the children-animal interface is lacking. We hypothesized that Campylobacter is a major cause of enteritis in children in Ethiopia, and contact with animals is a potential source of transmission. The objective of the study was to determine Campylobacter occurrence and its AMR in children under five with diarrhea, backyard farm animals, and companion pets. Stool from 303 children and feces from 711 animals were sampled. Campylobacter was isolated through membrane filtration on modified charcoal cefoperazone deoxycholate agar plates under microaerobic incubation, and the technique showed to be feasible for use in regions lacking organized laboratories. Typical isolates were characterized with MALDI-TOF MS and multiplex PCR. Of 303 children, 20% (n = 59) were infected, with a higher proportion in the 6 to 11-month age group. Campylobacter occurred in 64% (n = 14) of dogs and 44% (n = 112) of poultry. Campylobacter jejuni was present in both a child and animal species in 15% (n = 23) of 149 households positive for Campylobacter. MICs using the gradient strip diffusion test of 128 isolates displayed resistance rates of 20% to ciprofloxacin and 11% to doxycycline. MICs of ciprofloxacin and doxycycline varied between C. coli and C. jejuni, with higher resistance in C. coli and poultry isolates. Campylobacter infection in children and its prevalent excretion from backyard poultry and dogs is a understudied concern. The co-occurrence of C. jejuni in animals and children suggest household-level transmission As resistance to ciprofloxacin and doxycycline was observed, therapy of severe campylobacteriosis should consider susceptibility testing. Findings from this study can support evidence-based diagnosis, antimicrobial treatment, and further investigations on the spread of AMR mechanisms for informed One Health intervention.


Subject(s)
Animals, Domestic , Anti-Bacterial Agents , Campylobacter Infections , Campylobacter , Diarrhea , Feces , Pets , Animals , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Campylobacter Infections/drug therapy , Campylobacter Infections/transmission , Campylobacter Infections/epidemiology , Child, Preschool , Pets/microbiology , Humans , Infant , Anti-Bacterial Agents/pharmacology , Diarrhea/microbiology , Diarrhea/veterinary , Diarrhea/epidemiology , Campylobacter/drug effects , Campylobacter/isolation & purification , Male , Animals, Domestic/microbiology , Female , Feces/microbiology , Dogs , Ethiopia/epidemiology , Drug Resistance, Bacterial , Microbial Sensitivity Tests , Poultry/microbiology , Campylobacter jejuni/drug effects , Campylobacter jejuni/isolation & purification , Infant, Newborn
19.
Poult Sci ; 103(8): 103897, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38865770

ABSTRACT

Campylobacter jejuni continues to be a major public health issue worldwide. Poultry are recognized as the main reservoir for this foodborne pathogen. Implementing measures to decrease C. jejuni colonization on farms has been regarded as the most effective strategy to control the incidence of campylobacteriosis. The probiotics supplementation has been regarded as an attractive approach against C. jejuni in chickens. Here the inhibitory effects of one probiotic B. velezensis isolate CAU277 against C. jejuni was evaluated in vitro and in vivo. The in vitro antimicrobial activity showed that the supernatant of B. velezensis exhibited the most pronounced inhibitory effects on Campylobacter strains compared to other bacterial species. When co-cultured with B. velezensis, the growth of C. jejuni reduced significantly from 7.46 log10 CFU/mL (24 h) to 1.02 log10 CFU/mL (48 h). Further, the antimicrobial activity of B. velezensis against C. jejuni remained stable under a broad range of temperature, pH, and protease treatments. The in vivo experiments demonstrated that oral administration of B. velezensis significantly reduced the colonization of C. jejuni by 2.0 log10 CFU/g of feces in chicken cecum at 15 d postinoculation. In addition, the supplementary of B. velezensis significantly increased microbial species richness and diversity in chicken ileum, especially enhanced the bacterial population of Alistipes and Christensenellaceae, and decreased the existence of Lachnoclostridium. Our study presents that B. velezensis possesses antimicrobial activities against C. jejuni and promotes microbiota diversity in chicken intestines. These findings indicate a potential to develop an effective probiotic additive to control C. jejuni infection in chicken.


Subject(s)
Bacillus , Campylobacter Infections , Campylobacter jejuni , Chickens , Poultry Diseases , Probiotics , Animals , Probiotics/pharmacology , Probiotics/administration & dosage , Campylobacter jejuni/drug effects , Poultry Diseases/prevention & control , Poultry Diseases/microbiology , Campylobacter Infections/veterinary , Campylobacter Infections/prevention & control , Campylobacter Infections/microbiology , Bacillus/physiology , Animal Feed/analysis , Diet/veterinary , Gastrointestinal Microbiome/drug effects
20.
Rinsho Shinkeigaku ; 64(7): 490-495, 2024 Jul 27.
Article in Japanese | MEDLINE | ID: mdl-38910116

ABSTRACT

A 43-year-old man was admitted to our department due to fever and headache. The cerebrospinal fluid analysis confirmed bacterial meningitis. Campylobacter species were isolated from blood cultures on the third day of admission. The patient was treated with meropenem (MEPM) and discharged on the 17th day. However, he experienced a recurrence of meningitis and was readmitted on the 68th day, initiating MEPM therapy. Campylobacter fetus was isolated from cerebrospinal fluid cultures on the 74th day. MEPM was continued until the 81st day, followed by one month of minocycline (MINO) therapy. The patient had an uneventful recovery without further recurrence. This case highlights the potential for recurrence of Campylobacter fetus meningitis approximately two months after the resolution of the initial infection. In addition to carbapenem therapy for at least two weeks, the adjunctive administration of MINO may be beneficial.


Subject(s)
Anti-Bacterial Agents , Campylobacter Infections , Campylobacter fetus , Meningitis, Bacterial , Meropenem , Minocycline , Recurrence , Humans , Male , Adult , Campylobacter fetus/isolation & purification , Campylobacter Infections/drug therapy , Campylobacter Infections/complications , Campylobacter Infections/diagnosis , Campylobacter Infections/microbiology , Meropenem/administration & dosage , Meningitis, Bacterial/drug therapy , Meningitis, Bacterial/microbiology , Meningitis, Bacterial/diagnosis , Anti-Bacterial Agents/administration & dosage , Time Factors , Minocycline/administration & dosage , Treatment Outcome , Thienamycins/administration & dosage , Drug Therapy, Combination
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