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1.
PLoS One ; 19(8): e0308541, 2024.
Article in English | MEDLINE | ID: mdl-39159160

ABSTRACT

Plants have developed precise defense mechanisms against cadmium (Cd) stress, with vacuolar compartmentalization of Cd2+ being a crucial process in Cd detoxification. The transport of Cd into vacuoles by these cation / H+ antiporters is powered by the pH gradient created by proton pumps. In this study, the full-length cDNA of a vacuolar H+-pyrophosphatase (V-PPase) gene from Boehmeria nivea (ramie), BnVP1, was isolated using the rapid amplification of cDNA ends (RACE) method. The open reading frame (ORF) of BnVP1 is 2292 bp, encoding a 763 amino acid V-PPase protein with 15 predicted transmembrane domains. Sequence alignment and phylogenetic analysis revealed that BnVP1 belongs to the Type I V-PPase family. Quantitative RT-PCR assays demonstrated that BnVP1 expression was significantly higher in ramie roots than in shoots. Cd treatments markedly induced BnVP1 expression in both roots and leaves of ramie seedlings, with a more pronounced effect in roots. Additionally, BnVP1 expression was significantly upregulated by the plant hormone methyl jasmonate (MeJA). Heterologous expression of BnVP1 in transgenic Arabidopsis significantly enhanced V-PPase activity in the roots. The growth performance, root elongation, and total chlorophyll content of transgenic plants with high tonoplast H+-PPase (V-PPase) activity were superior to those of wild-type plants. Overexpression of BnVP1 reduced membrane lipid peroxidation and ion leakage, and significantly increased Cd accumulation in the roots of transgenic Arabidopsis seedlings. This study provides new genetic resources for the phytoremediation of Cd-contaminated farmland.


Subject(s)
Arabidopsis , Boehmeria , Cadmium , Gene Expression Regulation, Plant , Inorganic Pyrophosphatase , Phylogeny , Plants, Genetically Modified , Vacuoles , Arabidopsis/genetics , Cadmium/metabolism , Cadmium/toxicity , Plants, Genetically Modified/genetics , Inorganic Pyrophosphatase/genetics , Inorganic Pyrophosphatase/metabolism , Vacuoles/metabolism , Boehmeria/genetics , Boehmeria/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Roots/genetics , Plant Roots/metabolism , Plant Roots/growth & development , Plant Roots/drug effects , Amino Acid Sequence , Cyclopentanes/pharmacology , Cyclopentanes/metabolism , Oxylipins/pharmacology , Oxylipins/metabolism , Acetates
2.
Physiol Plant ; 176(4): e14481, 2024.
Article in English | MEDLINE | ID: mdl-39164920

ABSTRACT

Potatoes (Solanum tuberosum L.) are one of the world's major staple crops. In stored potatoes, Pectobacterium carotovorum subsp carotovorum causes soft rot. As a result of the rapid spread of the disease during post-harvest storage, potato production suffers huge losses. By detecting disease early and controlling it promptly, losses can be minimized. The profile of volatiles of plants can be altered by phytopathogens. Identifying unique volatile organic compounds (VOCs) as biomarkers for early disease detection has attracted considerable research attention. This study compared the VOC profiles of healthy and soft rot inoculated potatoes (cv. "Kufri Pukhraj") over a time course using gas chromatography-mass spectrometry (GC-MS). It was found that there was a differential emission of 27 VOCs between healthy non-inoculated potatoes and soft rot inoculated potatoes. Among 27 VOCs, only five (1-octen-3-ol, 2-methylisoborneol, 3-octanone, 1,4-dimethyladamantane, and 2-methyl-2-bornene) were found exclusively in soft rot inoculated potatoes, suggesting them potential biomarker for non-destructive prediction of soft rot disease in potatoes. Reactive oxygen species (H2O2) and phytohormone methyl-jasmonate (MeJa) levels increased transiently on infection with soft rot. The analysis of the primary metabolism of soft rot infected tubers at three different stages suggests metabolic reprogramming that occurs at the early stage of infection, possibly leading to biomarker volatile emission. Based on these results, it appears that the initial potato-soft rot bacteria interaction initiates metabolic reprogramming mainly through H2O2 and the MeJa signalling pathway. In asymptomatic potatoes, these biomarkers may be promising candidates for non-destructive detection of soft rot at an early stage. These biomarkers can be used to develop an e-nose sensor to predict soft rot in the future.


Subject(s)
Biomarkers , Plant Diseases , Plant Growth Regulators , Solanum tuberosum , Volatile Organic Compounds , Solanum tuberosum/microbiology , Solanum tuberosum/metabolism , Volatile Organic Compounds/metabolism , Volatile Organic Compounds/analysis , Plant Diseases/microbiology , Biomarkers/metabolism , Plant Growth Regulators/metabolism , Plant Growth Regulators/analysis , Gas Chromatography-Mass Spectrometry/methods , Cyclopentanes/metabolism , Pectobacterium carotovorum/pathogenicity , Pectobacterium carotovorum/physiology , Oxylipins/metabolism , Oxylipins/analysis , Plant Tubers/microbiology , Plant Tubers/metabolism
3.
Gene ; 928: 148810, 2024 Nov 30.
Article in English | MEDLINE | ID: mdl-39089530

ABSTRACT

Caffeoyl-coenzyme 3 A-O-methyltransferase (CCoAOMT) plays a crucial role in the lignin synthesis in many higher plants. In this study, nine PbCCoAOMT genes in total were identified from pear, and classified into six categories. We treated pear fruits with hormones abscisic acid (ABA) and methyl jasmonate (MeJA) and salicylic acid (SA) and observed differential expression levels of these genes. Through qRT-PCR, we also preliminarily identified candidate PbCCoAOMT gene, potentially involved in lignin synthesis in pear fruits. Additionally, the overexpression of PbCCoAOMT1/2 in Arabidopsis and pear fruits increased in lignin content. Enzymatic assays showed that recombinant PbCCoAOMT1/2 proteins have similar enzymatic activity in vitro. The Y1H (Yeast one-hybrid) and dual luciferase (dual-LUC) experiments demonstrated that PbMYB25 can bind to the AC elements in the promoter region of the PbCCoAOMT1 gene. Our findings suggested that the PbCCoAOMT1 and PbCCoAOMT2 genes may contribute to the synthesis of lignin and provide insights into the mechanism of lignin biosynthesis and stone cell development in pear fruits.


Subject(s)
Arabidopsis , Gene Expression Regulation, Plant , Lignin , Methyltransferases , Pyrus , Lignin/metabolism , Lignin/biosynthesis , Methyltransferases/genetics , Methyltransferases/metabolism , Pyrus/genetics , Pyrus/metabolism , Arabidopsis/genetics , Arabidopsis/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Abscisic Acid/metabolism , Fruit/genetics , Fruit/metabolism , Salicylic Acid/metabolism , Promoter Regions, Genetic , Plants, Genetically Modified/genetics , Oxylipins/metabolism , Cyclopentanes/metabolism , Acetates/metabolism
4.
Plant Cell Rep ; 43(8): 206, 2024 Aug 02.
Article in English | MEDLINE | ID: mdl-39093416

ABSTRACT

Plants cannot move, so they have evolved sophisticated strategies that integrate the external environmental cues and internal signaling networks for adaptation to dynamic circumstances. Cis-(+)-12-oxo-phytodienoic acid (OPDA) and 2,3-dinor-OPDA (dn-OPDA), the cyclopentenone-containing oxylipins, ubiquitously occur in the green lineage to orchestrate a series of growth and developmental processes as well as various stress and defense responses. OPDA/dn-OPDA are precursors of jasmonate (JA) biosynthesis in vascular plants. Dn-OPDA and its isomer also serve as bioactive JAs perceived by the coronatine insensitive 1/jasmonate ZIM-domain (COI1/JAZ) co-receptor complex in bryophytes and lycophytes. In addition, OPDA/dn-OPDA display signaling activities independent of (+)-7-iso-jasmonoyl-L-isoleucine (JA-Ile) and COI1 in both vascular and non-vascular plants. In this review, we discuss recent advances in the biosynthesis, metabolism, and signaling of OPDA/dn-OPDA, and provide an overview of the evolution of OPDA/dn-OPDA actions to obtain a deeper understanding of the pervasive role of OPDA/dn-OPDA in the plant life cycle.


Subject(s)
Cyclopentanes , Fatty Acids, Unsaturated , Oxylipins , Signal Transduction , Oxylipins/metabolism , Cyclopentanes/metabolism , Fatty Acids, Unsaturated/metabolism , Fatty Acids, Unsaturated/biosynthesis , Plants/metabolism , Plant Growth Regulators/metabolism , Gene Expression Regulation, Plant
5.
J Agric Food Chem ; 72(33): 18606-18618, 2024 Aug 21.
Article in English | MEDLINE | ID: mdl-39110027

ABSTRACT

Some germination is known to occur during the process of fermentation in cocoa beans. The impact of this biological process on the course of cocoa fermentation is not known and was thus investigated. In order to determine the impact of germination at the molecular level as well as on flavor, an untargeted metabolomics approach using Ultra Performance Liquid Chromatography-Electrospray Ionization-Time of Flight-Mass Spectrometry (UPLC-ESI-ToF-MS) with simultaneous acquisition of low- and high-collision energy mass spectra (MSe) was performed. Extracts of raw and germinated cocoa beans of the same origin were measured and compared for characteristic differences by unsupervised principal component analysis. OPLS-DA revealed 12-hydroxyjasmonic acid (HOJA) sulfate, (+)-catechin and (-)-epicatechin as most down-regulated compounds as well as two hydroxymethylglutaryl (HMG) glucosides A and B among others as decisive up-regulated compounds in the germinated material. Additionally, further HMG glucosides and 12-hydroxyjasmonic acid could be identified in cocoa for the first time by coelution with isolated and synthesized reference compounds. HOJA sulfate, which has been postulated in cocoa, and HOJA were revealed to impart bitter and astringent taste qualities.


Subject(s)
Cacao , Germination , Seeds , Cacao/chemistry , Cacao/metabolism , Cacao/growth & development , Seeds/chemistry , Seeds/growth & development , Seeds/metabolism , Chromatography, High Pressure Liquid , Spectrometry, Mass, Electrospray Ionization , Catechin/metabolism , Catechin/analysis , Taste , Oxylipins/metabolism , Cyclopentanes/metabolism
6.
J Agric Food Chem ; 72(33): 18347-18352, 2024 Aug 21.
Article in English | MEDLINE | ID: mdl-39120622

ABSTRACT

Common agronomic practices such as stem topping, side branch removal, and girdling can induce wound priming, mediated by jasmonic acid (JA). Low light conditions during greenhouse tomato production make the leaves more sensitive to the application of exogenous sugar, which is perceived as a "danger" in accordance with the concept of "Sweet Immunity". Consequently, source-sink balances are altered, leading to the remobilization of stem starch reserves and enabling the redirection of more carbon toward developing fruits, thereby increasing tomato yield and fruit quality. Similarities are drawn with the mobilization of fructans following defoliation of fodder grasses (wounding) and the remobilization of fructan and starch reserves under terminal drought and heat stress in wheat and rice (microwounding, cellular leakage). A central role for JA signaling is evident in all of these processes, closely intertwining with sugar signaling pathways. Therefore, JA signaling, associated with wounding and sugar priming events, offers numerous opportunities to alter source-sink balances across a broader spectrum of agricultural and horticultural crops, for instance, through the exogenous application of JA and fructans or a combination. This may entail reconfiguring and reversing phloem connections, potentially leading to an enhanced yield and product quality. Such processes may also disengage the growth-defense trade-off in plants.


Subject(s)
Cyclopentanes , Oxylipins , Plant Stems , Oxylipins/metabolism , Cyclopentanes/metabolism , Plant Stems/growth & development , Plant Stems/immunology , Plant Stems/metabolism , Plant Stems/drug effects , Solanum lycopersicum/immunology , Solanum lycopersicum/growth & development , Solanum lycopersicum/metabolism , Plant Growth Regulators/pharmacology , Plant Growth Regulators/metabolism
7.
Funct Integr Genomics ; 24(5): 141, 2024 Aug 20.
Article in English | MEDLINE | ID: mdl-39160350

ABSTRACT

Rice root system plays a crucial role in plant adaptation under adverse conditions, particularly drought stress. However, the regulatory gene networks that govern rice root development during stress exposure remain largely unexplored. In this study, we applied a QTL sequencing method to identify QTL/gene controlling the crown root development under Jasmonic acid simulation using the Bulk-segregant analysis. Two rice cultivars with contrasting phenotypes from the Vietnamese traditional rice collection were used as parent pairs for crossing. The single-seed descent method was employed to generate an F2 population of progenies. This F2/3 population was further segregated based on root count under JA stress. Pooled DNA from the two extreme groups in this population was sequenced, and SNP indexes across all loci in these pools were calculated. We detected a significant genomic region on chromosome 10, spanned from 20.39-20.50 Mb, where two rice RLKs were located, OsPUB54 and OsPUB58. Receptor-like kinases (RLKs) are pivotal in regulating various aspects of root development in plants, and the U-box E3 ubiquitination ligase class was generally known for its degradation of some protein complexes. Notably, OsPUB54 was strongly induced by JA treatment, suggesting its involvement in the degradation of the Aux/IAA protein complex, thereby influencing crown root initiation. Besides, the Eukaryotic translation initiation of factor 3 subunit L (eIF3l) and the Mitogen-activated protein kinase kinase kinase 37 (MAPKKK 37) proteins identified from SNPs with high score index which suggests their significant roles in the translation initiation process and cellular signaling pathways, respectively. This information suggests several clues of how these candidates are involved in modifying the rice root system under stress conditions.


Subject(s)
Cyclopentanes , Oryza , Oxylipins , Plant Roots , Quantitative Trait Loci , Oryza/genetics , Oryza/growth & development , Oryza/metabolism , Cyclopentanes/metabolism , Cyclopentanes/pharmacology , Oxylipins/metabolism , Oxylipins/pharmacology , Plant Roots/growth & development , Plant Roots/genetics , Plant Roots/metabolism , Polymorphism, Single Nucleotide , Plant Proteins/genetics , Plant Proteins/metabolism , Gene Expression Regulation, Plant
8.
Physiol Plant ; 176(4): e14475, 2024.
Article in English | MEDLINE | ID: mdl-39140303

ABSTRACT

Rhizoctonia solani is a fungal pathogen that causes significant losses in agricultural production. Because of its rapid transmission and broad host range, the exploration of genes involved in defense responses to the infection of R. solani has become an important task. Here, we performed a time-course RNA-Seq experiment to explore crucial genes or pathways involved in host responses to R. solani AG3-TB infection at 6, 12, 24, 36, 48, and 72 hours post inoculation (hpi). GO and KEGG enrichment analysis revealed that most DEGs were enriched in the basal metabolism pathways, including carbohydrate metabolic processes and the biosynthesis of amino acids. Moreover, catalase (CAT) and superoxide dismutase (SOD) were up-regulated, and transcription factors (TFs) such as WRKY, AP2, and MYB were increased significantly compared to the control (0 hpi). Silencing of WRKY70 and catalase-3 exhibited elevated susceptibility to the fungal infection. To summarize, the TFs WRKY70 and WRKY75, genes involved in jasmonic acid (JA), salicylic acid (SA), and brassinosteroids (BR) signaling pathways, and defense-related enzymes may play crucial roles in the host responses to R. solani AG3-TB infection.


Subject(s)
Disease Resistance , Gene Expression Regulation, Plant , Plant Diseases , Rhizoctonia , Transcription Factors , Rhizoctonia/physiology , Rhizoctonia/pathogenicity , Plant Diseases/microbiology , Plant Diseases/genetics , Plant Diseases/immunology , Disease Resistance/genetics , Transcription Factors/metabolism , Transcription Factors/genetics , Oxylipins/metabolism , Cyclopentanes/metabolism , Salicylic Acid/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Signal Transduction/genetics , Host-Pathogen Interactions/genetics
9.
Physiol Plant ; 176(4): e14473, 2024.
Article in English | MEDLINE | ID: mdl-39129661

ABSTRACT

The jasmonic acid (JA) signaling pathway plays an important role in plant responses to abiotic stresses. The PEAPOD (PPD) and jasmonate ZIM-domain (JAZ) protein in the JA signaling pathway belong to the same family, but their functions in regulating plant defense against salt stress remain to be elucidated. Here, Gossypium arboreum PPD2 was overexpressed in Arabidopsis thaliana and systematically silenced in cotton for exploring its function in regulating plant defense to salt stress. The GaPPD2-overexpressed Arabidopsis thaliana plants significantly increased the tolerance to salt stress compared to the wild type in both medium and soil, while the GaPPD2-silenced cotton plants showed higher sensitivity to salt stress than the control in pots. The antioxidant activities experiment showed that GaPPD2 may mitigate the accumulation of reactive oxygen species by promoting superoxide dismutase accumulation, consequently improving plant resilience to salt stress. Through the exogenous application of MeJA (methy jasmonate) and the protein degradation inhibitor MG132, it was found that GaPPD2 functions in plant defense against salt stress and is involved in the JA signaling pathway. The RNA-seq analysis of GaPPD2-overexpressed A. thaliana plants and receptor materials showed that the differentially expressed genes were mainly enriched in antioxidant activity, peroxidase activity, and plant hormone signaling pathways. qRT-PCR results demonstrated that GaPPD2 might positively regulate plant defense by inhibiting GH3.2/3.10/3.12 expression and activating JAZ7/8 expression. The findings highlight the potential of GaPPD2 as a JA signaling component gene for improving the cotton plant resistance to salt stress and provide insights into the mechanisms underlying plant responses to environmental stresses.


Subject(s)
Arabidopsis , Cyclopentanes , Gene Expression Regulation, Plant , Gossypium , Oxylipins , Plant Proteins , Plant Roots , Salt Stress , Gossypium/genetics , Gossypium/physiology , Gossypium/drug effects , Cyclopentanes/metabolism , Cyclopentanes/pharmacology , Oxylipins/metabolism , Oxylipins/pharmacology , Plant Proteins/genetics , Plant Proteins/metabolism , Arabidopsis/genetics , Arabidopsis/physiology , Arabidopsis/drug effects , Plant Roots/genetics , Plant Roots/growth & development , Plant Roots/physiology , Plant Roots/drug effects , Gene Expression Regulation, Plant/drug effects , Plants, Genetically Modified , Salt Tolerance/genetics , Plant Growth Regulators/metabolism , Signal Transduction/drug effects
10.
Molecules ; 29(15)2024 Jul 28.
Article in English | MEDLINE | ID: mdl-39124963

ABSTRACT

Plant glucanases and chitinases are defense proteins that participate in pathogenesis; however, very little is known about the glucanase (GLUC) and chitinase (CHIT) gene families in mango. Some mango cultivars are of great economic importance and can be affected by anthracnose, a postharvest disease caused by fungi of the genus Colletotrichum spp. This study identified and characterized 23 putative glucanases and 16 chitinases in the mango genome cv. Tommy Atkins. We used phylogenetic analyses to classify the glucanases into three subclasses (A, B, and C) and the chitinases into four classes (I, II, IV, and V). Information on the salicylic, jasmonic acid, and ethylene pathways was obtained by analyzing the cis-elements of the GLUC and CHIT class I and IV gene promoters. The expression profile of GLUC, CHIT class I, and CHIT class IV genes in mango cv. Ataulfo inoculated with two Colletotrichum spp. revealed different profile expression related to these fungi's level of virulence. In general, this study provides the basis for the functional validation of these target genes with which the regulatory mechanisms used by glucanases and chitinases as defense proteins in mango can be elucidated.


Subject(s)
Chitinases , Colletotrichum , Gene Expression Regulation, Plant , Mangifera , Phylogeny , Plant Diseases , Colletotrichum/pathogenicity , Colletotrichum/genetics , Mangifera/microbiology , Mangifera/genetics , Chitinases/genetics , Chitinases/metabolism , Plant Diseases/microbiology , Plant Diseases/genetics , Glycoside Hydrolases/genetics , Glycoside Hydrolases/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Oxylipins/metabolism , Cyclopentanes/metabolism , Gene Expression Profiling
11.
Plant Cell Rep ; 43(9): 209, 2024 Aug 08.
Article in English | MEDLINE | ID: mdl-39115578

ABSTRACT

KEY MESSAGE: The C. roseus ZCTs are jasmonate-responsive, can be induced by CrMYC2a, and can act as significant regulators of the terpenoid indole alkaloid pathway when highly expressed. Catharanthus roseus is the sole known producer of the anti-cancer terpenoid indole alkaloids (TIAs), vinblastine and vincristine. While the enzymatic steps of the pathway have been elucidated, an understanding of its regulation is still emerging. The present study characterizes an important subgroup of Cys2-His2 zinc finger transcription factors known as Zinc finger Catharanthus Transcription factors (ZCTs). We identified three new ZCT members (named ZCT4, ZCT5, and ZCT6) that clustered with the putative repressors of the TIA pathway, ZCT1, ZCT2, and ZCT3. We characterized the role of these six ZCTs as potential redundant regulators of the TIA pathway, and their tissue-specific and jasmonate-responsive expression. These ZCTs share high sequence conservation in their two Cys2-His2 zinc finger domains but differ in the spacer length and sequence between these zinc fingers. The transient overexpression of ZCTs in seedlings significantly repressed the promoters of the terpenoid (pLAMT) and condensation branch (pSTR1) of the TIA pathway, consistent with that previously reported for ZCT1, ZCT2, and ZCT3. In addition, ZCTs significantly repressed and indirectly activated several promoters of the vindoline pathway (not previously studied). The ZCTs differed in their tissue-specific expression but similarly increased with jasmonate in a dosage-dependent manner (except for ZCT5). We showed significant activation of the pZCT1 and pZCT3 promoters by the de-repressed CrMYC2a, suggesting that the jasmonate-responsive expression of the ZCTs can be mediated by CrMYC2a. In summary, the C. roseus ZCTs are jasmonate-responsive, can be induced by CrMYC2a, and can act as significant regulators of the TIA pathway when highly expressed.


Subject(s)
Catharanthus , Cyclopentanes , Gene Expression Regulation, Plant , Oxylipins , Plant Proteins , Transcription Factors , Catharanthus/genetics , Catharanthus/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Transcription Factors/metabolism , Transcription Factors/genetics , Oxylipins/metabolism , Oxylipins/pharmacology , Cyclopentanes/metabolism , Cyclopentanes/pharmacology , CYS2-HIS2 Zinc Fingers/genetics , Plants, Genetically Modified , Secologanin Tryptamine Alkaloids/metabolism , Phylogeny , Zinc Fingers
12.
Nat Commun ; 15(1): 6652, 2024 Aug 06.
Article in English | MEDLINE | ID: mdl-39103368

ABSTRACT

Nicotinamide adenine dinucleotide (NAD+) is a redox cofactor and signal central to cell metabolisms. Disrupting NAD homeostasis in plant alters growth and stress resistance, yet the underlying mechanisms remain largely unknown. Here, by combining genetics with multi-omics, we discover that NAD+ deficiency in qs-2 caused by mutation in NAD+ biosynthesis gene-Quinolinate Synthase retards growth but induces biosynthesis of defense compounds, notably aliphatic glucosinolates that confer insect resistance. The elevated defense in qs-2 is resulted from activated jasmonate biosynthesis, critically hydroperoxidation of α-linolenic acid by the 13-lipoxygenase (namely LOX2), which is escalated via the burst of chloroplastic ROS-singlet oxygen (1O2). The NAD+ deficiency-mediated JA induction and defense priming sequence in plants is recapitulated upon insect infestation, suggesting such defense mechanism operates in plant stress response. Hence, NAD homeostasis is a pivotal metabolic checkpoint that may be manipulated to navigate plant growth and defense metabolism for stress acclimation.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Cyclopentanes , NAD , Oxylipins , Cyclopentanes/metabolism , Oxylipins/metabolism , NAD/metabolism , NAD/biosynthesis , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Gene Expression Regulation, Plant , Homeostasis , Animals , Mutation , Lipoxygenase/metabolism , Lipoxygenase/genetics , Glucosinolates/metabolism , Glucosinolates/biosynthesis , Reactive Oxygen Species/metabolism , Stress, Physiological
13.
Sci Rep ; 14(1): 18093, 2024 08 05.
Article in English | MEDLINE | ID: mdl-39103552

ABSTRACT

12-oxophytodienoate reductase 3 (OPR3) is a key enzyme in the biosynthesis of jasmonoyl-L-isoleucine, the receptor-active form of jasmonic acid and crucial signaling molecule in plant defense. OPR3 was initially crystallized as a self-inhibitory dimer, implying that homodimerization regulates enzymatic activity in response to biotic and abiotic stresses. Since a sulfate ion is bound to Y364, mimicking a phosphorylated tyrosine, it was suggested that dimer formation might be controlled by reversible phosphorylation of Y364 in vivo. To investigate OPR3 homodimerization and its potential physiological role in more detail, we performed analytical gel filtration and dynamic light scattering on wild-type OPR3 and three variants (R283D, R283E, and Y364P). The experiments revealed a rapid and highly sensitive monomer-dimer equilibrium for all OPR3 constructs. We crystallized all constructs with and without sulfate to examine its effect on the dimerization process and whether reversible phosphorylation of Y364 triggers homodimerization in vivo. All OPR3 constructs crystallized in their monomeric and dimeric forms independent of the presence of sulfate. Even variant Y364P, lacking the putative phosphorylation site, was crystallized as a self-inhibitory homodimer, indicating that Y364 is not required for dimerization. Generally, the homodimer is relatively weak, and our results raise doubts about its physiological role in regulating jasmonate biosynthesis.


Subject(s)
Protein Multimerization , Phosphorylation , Oxylipins/metabolism , Cyclopentanes/metabolism , Oxidoreductases/metabolism , Oxidoreductases/chemistry , Plant Proteins/metabolism , Plant Proteins/genetics , Plant Proteins/chemistry , Crystallography, X-Ray , Solanum lycopersicum/metabolism , Solanum lycopersicum/enzymology , Solanum lycopersicum/genetics , Sulfates/metabolism , Oxidoreductases Acting on CH-CH Group Donors
14.
Methods Mol Biol ; 2827: 109-143, 2024.
Article in English | MEDLINE | ID: mdl-38985266

ABSTRACT

Plant growth regulators are routinely added to in vitro culture media to foster the growth and differentiation of the cells, tissues, and organs. However, while the literature on usage of the more common auxins, cytokinins, gibberellins, abscisic acid, and ethylene is vast, other compounds that also have shown a growth-regulating activity have not been studied as frequently. Such substances are also capable of modulating the responses of plant cells and tissues in vitro by regulating their growth, differentiation, and regeneration competence, but also by enhancing their responses toward biotic and abiotic stress agents and improving the production of secondary metabolites of interest. This chapter will discuss the in vitro effects of several of such less frequently added plant growth regulators, including brassinosteroids (BRS), strigolactones (SLs), phytosulfokines (PSKs), methyl jasmonate, salicylic acid (SA), sodium nitroprusside (SNP), hydrogen sulfite, various plant growth retardants and inhibitors (e.g., ancymidol, uniconazole, flurprimidol, paclobutrazol), and polyamines.


Subject(s)
Plant Growth Regulators , Plant Growth Regulators/pharmacology , Plant Growth Regulators/metabolism , Tissue Culture Techniques/methods , Brassinosteroids/pharmacology , Brassinosteroids/metabolism , Plant Development/drug effects , Plants/metabolism , Plants/drug effects , Lactones/pharmacology , Lactones/metabolism , Oxylipins/pharmacology , Oxylipins/metabolism , Cyclopentanes/pharmacology , Cyclopentanes/metabolism , Salicylic Acid/pharmacology , Salicylic Acid/metabolism , Acetates/pharmacology , Acetates/metabolism
15.
BMC Plant Biol ; 24(1): 677, 2024 Jul 17.
Article in English | MEDLINE | ID: mdl-39014327

ABSTRACT

Climate change is predicted to increase the occurrence of extreme weather events such as heatwaves, which may thereby impact the outcome of plant-herbivore interactions. While elevated temperature is known to directly affect herbivore growth, it remains largely unclear if it indirectly influences herbivore performance by affecting the host plant they feed on. In this study, we investigated how transient exposure to high temperature influences plant herbivory-induced defenses at the transcript and metabolic level. To this end, we studied the interaction between potato (Solanum tuberosum) plants and the larvae of the potato tuber moth (Phthorimaea operculella) under different temperature regimes. We found that P. operculella larvae grew heavier on leaves co-stressed by high temperature and insect herbivory than on leaves pre-stressed by herbivory alone. We also observed that high temperature treatments altered phylotranscriptomic patterns upon herbivory, which changed from an evolutionary hourglass pattern, in which transcriptomic responses at early and late time points after elicitation are more variable than the ones in the middle, to a vase pattern. Specifically, transcripts of many herbivory-induced genes in the early and late defense stage were suppressed by HT treatment, whereas those in the intermediate stage peaked earlier. Additionally, we observed that high temperature impaired the induction of jasmonates and defense compounds upon herbivory. Moreover, using jasmonate-reduced (JA-reduced, irAOC) and -elevated (JA-Ile-elevated, irCYP94B3s) potato plants, we showed that high temperature suppresses JA signaling mediated plant-induced defense to herbivore attack. Thus, our study provides evidences on how temperature reprograms plant-induced defense to herbivores.


Subject(s)
Heat-Shock Response , Herbivory , Larva , Moths , Solanum tuberosum , Solanum tuberosum/physiology , Solanum tuberosum/parasitology , Solanum tuberosum/genetics , Solanum tuberosum/immunology , Animals , Moths/physiology , Larva/physiology , Gene Expression Regulation, Plant , Plant Leaves/physiology , Plant Leaves/parasitology , Hot Temperature , Oxylipins/metabolism , Cyclopentanes/metabolism , Plant Defense Against Herbivory , Transcriptome , Climate Change
16.
Int J Mol Sci ; 25(13)2024 Jul 08.
Article in English | MEDLINE | ID: mdl-39000596

ABSTRACT

The adaption of plants to stressful environments depends on long-distance responses in plant organs, which themselves are remote from sites of perception of external stimuli. Jasmonic acid (JA) and its derivatives are known to be involved in plants' adaptation to salinity. However, to our knowledge, the transport of JAs from roots to shoots has not been studied in relation to the responses of shoots to root salt treatment. We detected a salt-induced increase in the content of JAs in the roots, xylem sap, and leaves of pea plants related to changes in transpiration. Similarities between the localization of JA and lipid transfer proteins (LTPs) around vascular tissues were detected with immunohistochemistry, while immunoblotting revealed the presence of LTPs in the xylem sap of pea plants and its increase with salinity. Furthermore, we compared the effects of exogenous MeJA and salt treatment on the accumulation of JAs in leaves and their impact on transpiration. Our results indicate that salt-induced changes in JA concentrations in roots and xylem sap are the source of accumulation of these hormones in leaves leading to associated changes in transpiration. Furthermore, they suggest the possible involvement of LTPs in the loading/unloading of JAs into/from the xylem and its xylem transport.


Subject(s)
Carrier Proteins , Cyclopentanes , Oxylipins , Pisum sativum , Plant Leaves , Plant Proteins , Plant Roots , Xylem , Oxylipins/metabolism , Cyclopentanes/metabolism , Cyclopentanes/pharmacology , Pisum sativum/metabolism , Pisum sativum/drug effects , Plant Proteins/metabolism , Xylem/metabolism , Plant Roots/metabolism , Carrier Proteins/metabolism , Plant Leaves/metabolism , Biological Transport , Plant Growth Regulators/metabolism
17.
Cell Rep Med ; 5(7): 101653, 2024 Jul 16.
Article in English | MEDLINE | ID: mdl-39019009

ABSTRACT

Drug-induced liver injury (DILI) is a significant cause of acute liver failure (ALF) and liver transplantation in the Western world. Acetaminophen (APAP) overdose is a main contributor of DILI, leading to hepatocyte cell death through necrosis. Here, we identified that neddylation, an essential post-translational modification involved in the mitochondria function, was upregulated in liver biopsies from patients with APAP-induced liver injury (AILI) and in mice treated with an APAP overdose. MLN4924, an inhibitor of the neuronal precursor cell-expressed developmentally downregulated protein 8 (NEDD8)-activating enzyme (NAE-1), ameliorated necrosis and boosted liver regeneration in AILI. To understand how neddylation interferes in AILI, whole-body biotinylated NEDD8 (bioNEDD8) and ubiquitin (bioUB) transgenic mice were investigated under APAP overdose with and without MLN4924. The cytidine diphosphate diacylglycerol (CDP-DAG) synthase TAM41, responsible for producing cardiolipin essential for mitochondrial activity, was found modulated under AILI and restored its levels by inhibiting neddylation. Understanding this ubiquitin-like crosstalk in AILI is essential for developing promising targeted inhibitors for DILI treatment.


Subject(s)
Acetaminophen , Cardiolipins , Chemical and Drug Induced Liver Injury , Cyclopentanes , NEDD8 Protein , Pyrimidines , Acetaminophen/adverse effects , Animals , NEDD8 Protein/metabolism , NEDD8 Protein/genetics , Humans , Pyrimidines/pharmacology , Chemical and Drug Induced Liver Injury/metabolism , Chemical and Drug Induced Liver Injury/pathology , Chemical and Drug Induced Liver Injury/drug therapy , Cardiolipins/metabolism , Mice , Cyclopentanes/pharmacology , Male , Liver/metabolism , Liver/pathology , Liver/drug effects , Mice, Inbred C57BL , Mice, Transgenic , Hepatocytes/metabolism , Hepatocytes/drug effects , Hepatocytes/pathology , Signal Transduction/drug effects , Ubiquitin-Activating Enzymes/metabolism , Ubiquitin-Activating Enzymes/genetics , Ubiquitin-Activating Enzymes/antagonists & inhibitors
18.
Physiol Plant ; 176(4): e14436, 2024.
Article in English | MEDLINE | ID: mdl-39019771

ABSTRACT

Small secreted peptides (SSPs), serving as signaling molecules for intercellular communication, play significant regulatory roles in plant growth, development, pathogen immunity, and responses to abiotic stress. Despite several SSPs, such as PIP, PSK, and PSY having been identified to participate in plant immunity, the majority of SSPs remain understudied, necessitating the exploration and identification of SSPs regulating plant immunity from vast genomic resources. Here we systematically characterized 756 putative SSPs across the genome of Nicotiana tabacum. 173 SSPs were further annotated as established SSPs, such as nsLTP, CAPE, and CEP. Furthermore, we detected the expression of 484 putative SSP genes in five tissues, with 83 SSPs displaying tissue-specific expression. Transcriptomic analysis of tobacco roots under plant defense hormones revealed that 46 SSPs exhibited specific responsiveness to salicylic acid (SA), and such response was antagonistically regulated by methyl jasmonate. It's worth noting that among these 46 SSPs, 16 members belong to nsLTP family, and one of them, NtLTP25, was discovered to enhance tobacco's resistance against Phytophthora nicotianae. Overexpression of NtLTP25 in tobacco enhanced the expression of ICS1, subsequently stimulating the biosynthesis of SA and the expression of NPR1 and pathogenesis-related genes. Concurrently, NtLTP25 overexpression activated genes associated with ROS scavenging, consequently mitigating the accumulation of ROS during the subsequent phases of pathogenesis. These discoveries indicate that these 46 SSPs, especially the 16 nsLTPs, might have a vital role in governing plant immunity that relies on SA signaling. This offers a valuable source for pinpointing SSPs involved in regulating plant immunity.


Subject(s)
Gene Expression Regulation, Plant , Nicotiana , Plant Diseases , Plant Immunity , Plant Proteins , Nicotiana/genetics , Nicotiana/immunology , Nicotiana/metabolism , Nicotiana/microbiology , Plant Immunity/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Diseases/microbiology , Plant Diseases/genetics , Plant Diseases/immunology , Disease Resistance/genetics , Genome, Plant/genetics , Peptides/metabolism , Peptides/genetics , Phytophthora/physiology , Phytophthora/pathogenicity , Salicylic Acid/metabolism , Cyclopentanes/metabolism , Oxylipins/metabolism , Gene Expression Profiling
19.
Proc Natl Acad Sci U S A ; 121(28): e2320655121, 2024 Jul 09.
Article in English | MEDLINE | ID: mdl-38959043

ABSTRACT

SLC7A11 is a cystine transporter and ferroptosis inhibitor. How the stability of SLC7A11 is coordinately regulated in response to environmental cystine by which E3 ligase and deubiquitylase (DUB) remains elusive. Here, we report that neddylation inhibitor MLN4924 increases cystine uptake by causing SLC7A11 accumulation, via inactivating Cullin-RING ligase-3 (CRL-3). We identified KCTD10 as the substrate-recognizing subunit of CRL-3 for SLC7A11 ubiquitylation, and USP18 as SLC7A11 deubiquitylase. Upon cystine deprivation, the protein levels of KCTD10 or USP18 are decreased or increased, respectively, contributing to SLC7A11 accumulation. By destabilizing or stabilizing SLC7A11, KCTD10, or USP18 inversely regulates the cystine uptake and ferroptosis. Biologically, MLN4924 combination with SLC7A11 inhibitor Imidazole Ketone Erastin (IKE) enhanced suppression of tumor growth. In human breast tumor tissues, SLC7A11 levels were negatively or positively correlated with KCTD10 or USP18, respectively. Collectively, our study defines how SLC7A11 and ferroptosis is coordinately regulated by the CRL3KCTD10/E3-USP18/DUB axis, and provides a sound rationale of drug combination to enhance anticancer efficacy.


Subject(s)
Cystine , Ferroptosis , Pyrimidines , Ubiquitin Thiolesterase , Animals , Female , Humans , Mice , Amino Acid Transport System y+/metabolism , Amino Acid Transport System y+/genetics , Breast Neoplasms/metabolism , Breast Neoplasms/genetics , Breast Neoplasms/pathology , Cell Line, Tumor , Cyclopentanes/metabolism , Cyclopentanes/pharmacology , Cystine/metabolism , HEK293 Cells , Piperazines/pharmacology , Pyrimidines/pharmacology , Ubiquitin Thiolesterase/metabolism , Ubiquitin Thiolesterase/genetics , Ubiquitin-Protein Ligases/metabolism , Ubiquitin-Protein Ligases/genetics , Ubiquitination
20.
Int J Mol Sci ; 25(14)2024 Jul 14.
Article in English | MEDLINE | ID: mdl-39062957

ABSTRACT

The AT-hook motif nuclear-localized (AHL) family is pivotal for the abiotic stress response in plants. However, the function of the cassava AHL genes has not been elucidated. Promoters, as important regulatory elements of gene expression, play a crucial role in stress resistance. In this study, the promoter of the cassava MeAHL31 gene was cloned. The MeAHL31 protein was localized to the cytoplasm and the nucleus. qRT-PCR analysis revealed that the MeAHL31 gene was expressed in almost all tissues tested, and the expression in tuber roots was 321.3 times higher than that in petioles. Promoter analysis showed that the MeAHL31 promoter contains drought, methyl jasmonate (MeJA), abscisic acid (ABA), and gibberellin (GA) cis-acting elements. Expression analysis indicated that the MeAHL31 gene is dramatically affected by treatments with salt, drought, MeJA, ABA, and GA3. Histochemical staining in the proMeAHL31-GUS transgenic Arabidopsis corroborated that the GUS staining was found in most tissues and organs, excluding seeds. Beta-glucuronidase (GUS) activity assays showed that the activities in the proMeAHL31-GUS transgenic Arabidopsis were enhanced by different concentrations of NaCl, mannitol (for simulating drought), and MeJA treatments. The integrated findings suggest that the MeAHL31 promoter responds to the abiotic stresses of salt and drought, and its activity is regulated by the MeJA hormone signal.


Subject(s)
Arabidopsis , Gene Expression Regulation, Plant , Manihot , Plant Growth Regulators , Plant Proteins , Plants, Genetically Modified , Promoter Regions, Genetic , Stress, Physiological , Arabidopsis/genetics , Arabidopsis/metabolism , Plants, Genetically Modified/genetics , Stress, Physiological/genetics , Manihot/genetics , Manihot/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Growth Regulators/metabolism , Plant Growth Regulators/pharmacology , Droughts , Cyclopentanes/pharmacology , Cyclopentanes/metabolism , Abscisic Acid/pharmacology , Abscisic Acid/metabolism , Oxylipins/pharmacology , Oxylipins/metabolism , Acetates/pharmacology
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