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1.
Reprod Domest Anim ; 59(1): e14497, 2024 Jan.
Article in English | MEDLINE | ID: mdl-37917556

ABSTRACT

Milk production traits as the most important economic traits of dairy cows, they directly reflect the benefits of breeding and the economic benefits of pasture. In this study, A disintegrin and metalloproteinase-12 (ADAM12), Parkinson's disease gene 2 (PRKN) and dipeptidyl peptidase-like protein subtype 6 (DPP6) polymorphism in 384 Chinese Holstein cows were detected by time-of-flight mass spectrometry and through statistical analysis using software such as Popgene 32, SAS 9.4 and Origin 2022, the relationship between single nucleotide polymorphisms (SNPs) of three genes with four milk production traits such as daily milk yield (DMY), milk fat percentage (MFP), milk protein percentage (MPP) and somatic cell score (SCS) was verified at molecular level. The results showed that four polymorphic loci (116,467,133, 116,604,487, 116,618,268 and 116,835,111) of DPP6 gene, two polymorphic loci (97,665,052 and 97,159,837) of PRKN gene and two polymorphic loci (45,542,714 and 45,553,888) of ADAM12 gene were detected. PRKN-97665052, DPP6-116467133, ADAM12-45553888, DPP6-116604487 and DPP6-116835111 were all in Hardy-Weinberg equilibrium state (p > .05). ADAM12-45542714, PRKN-97159837 and PRKN-97665052 were moderately polymorphic (0.25 ≤ PIC <0.50) in Holstein. It is evident that the selection potential and genetic variation of these five loci are relatively large, and the genetic richness is relatively high. The correlation analysis of different genotypes between these eight loci and milk production traits of Holstein showed that ADAM12-45542714 and DPP6-116835111 (p < .01) had an extremely significant effects on the DMY of Chinese Holstein in Ningxia, while PRKN-97665052 had an extremely significant effect on MFP (p < .01). The effect of PRKN-97665052 and DPP6-116467133 on MPP of Holstein were extremely significant (p < .01). DPP6-116618268 had an extremely significant effect on the SCS of Holstein in Ningxia (p < .01), and AA genotype individuals showed a higher SCS than GG genotype individuals; the other two loci (ADAM12-45553888 and DPP6-116604487) had no significant effects on milk production traits of Holstein (p > .05). In addition, through the joint analysis of DPP6, PRKN and ADAM12 gene loci, it was found that the interaction effect between the three gene loci could significantly affect the DMY, SCS (p < .01) and MPP (p < .05). In conclusion, several different loci of DPP6, PRKN and ADAM12 genes can affect the milk production traits of Holstein to different degrees. PRKN, DPP6 and ADAM12 genes can be used as potential candidate genes for milk production traits of Holstein for marker-assisted selection, providing theoretical basis for breeding of Holstein.


Subject(s)
Lactation , Milk , Polymorphism, Single Nucleotide , Animals , Cattle/genetics , Female , Humans , ADAM12 Protein/genetics , ADAM12 Protein/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/genetics , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism , Genotype , Lactation/genetics , Milk/chemistry , Milk Proteins , Nerve Tissue Proteins/analysis , Nerve Tissue Proteins/genetics , Nerve Tissue Proteins/metabolism , Phenotype , Potassium Channels/analysis , Potassium Channels/genetics , Potassium Channels/metabolism , Proteins/metabolism , Ubiquitin-Protein Ligases/genetics
2.
J Agric Food Chem ; 71(29): 11080-11093, 2023 Jul 26.
Article in English | MEDLINE | ID: mdl-37462007

ABSTRACT

A total of nine new phenolic amides (1-9), including four pairs of enantiomeric mixtures (3-5 and 8), along with ten known analogues (10-19) were identified from the fruits of Lycium barbarum using bioassay-guided chromatographic fractionation. Their structures were elucidated by comprehensive spectroscopic and spectrometric analyses, chiral HPLC analyses, and quantum NMR, and electronic circular dichroism calculations. Compounds 5-7 are the first example of feruloyl tyramine dimers fused through a cyclobutane ring. The activity results indicated that compounds 1, 11, and 13-17 exhibited remarkable inhibition against α-glucosidase with IC50 of 1.11-33.53 µM, 5-150 times stronger than acarbose (IC50 = 169.78 µM). Meanwhile, compounds 4a, 4b, 5a, 5b, 13, and 14 exerted moderate agonistic activities for peroxisome proliferator-activated receptor (PPAR-γ), with EC50 values of 10.09-44.26 µM. Especially,compound 14 also presented inhibitory activity on dipeptidyl peptidase-4 (DPPIV), with an IC50 value of 47.13 µM. Furthermore, the banding manner of compounds 14 and 17 with the active site of α-glucosidase, DPPIV, and PPAR-γ was explored by employing molecular docking analysis.


Subject(s)
Lycium , alpha-Glucosidases , alpha-Glucosidases/analysis , Fruit/chemistry , Lycium/chemistry , Peroxisome Proliferator-Activated Receptors , PPAR-gamma Agonists , Amides , Molecular Docking Simulation , Phenols/analysis , Magnetic Resonance Spectroscopy , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Molecular Structure , Glycoside Hydrolase Inhibitors/pharmacology , Glycoside Hydrolase Inhibitors/chemistry
3.
Crit Care ; 25(1): 61, 2021 02 15.
Article in English | MEDLINE | ID: mdl-33588925

ABSTRACT

BACKGROUND: Dipeptidyl peptidase 3 (DPP3) is a cytosolic enzyme involved in the degradation of various cardiovascular and endorphin mediators. High levels of circulating DPP3 (cDPP3) indicate a high risk of organ dysfunction and mortality in cardiogenic shock patients. METHODS: The aim was to assess relationships between cDPP3 during the initial intensive care unit (ICU) stay and short-term outcome in the AdrenOSS-1, a prospective observational multinational study in twenty-four ICU centers in five countries. AdrenOSS-1 included 585 patients admitted to the ICU with severe sepsis or septic shock. The primary outcome was 28-day mortality. Secondary outcomes included organ failure as defined by the Sequential Organ Failure Assessment (SOFA) score, organ support with focus on vasopressor/inotropic use and need for renal replacement therapy. cDPP3 levels were measured upon admission and 24 h later. RESULTS: Median [IQR] cDPP3 concentration upon admission was 26.5 [16.2-40.4] ng/mL. Initial SOFA score was 7 [5-10], and 28-day mortality was 22%. We found marked associations between cDPP3 upon ICU admission and 28-day mortality (unadjusted standardized HR 1.8 [CI 1.6-2.1]; adjusted HR 1.5 [CI 1.3-1.8]) and between cDPP3 levels and change in renal and liver SOFA score (p = 0.0077 and 0.0009, respectively). The higher the initial cDPP3 was, the greater the need for organ support and vasopressors upon admission; the longer the need for vasopressor(s), mechanical ventilation or RRT and the higher the need for fluid load (all p < 0.005). In patients with cDPP3 > 40.4 ng/mL upon admission, a decrease in cDPP3 below 40.4 ng/mL after 24 h was associated with an improvement of organ function at 48 h and better 28-day outcome. By contrast, persistently elevated cDPP3 at 24 h was associated with worsening organ function and high 28-day mortality. CONCLUSIONS: Admission levels and rapid changes in cDPP3 predict outcome during sepsis. Trial Registration ClinicalTrials.gov, NCT02393781. Registered on March 19, 2015.


Subject(s)
Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Mortality/trends , Sepsis/blood , Aged , Biomarkers/analysis , Biomarkers/blood , Chi-Square Distribution , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/blood , Female , Humans , Intensive Care Units/organization & administration , Intensive Care Units/statistics & numerical data , Male , Middle Aged , Multiple Organ Failure/blood , Multiple Organ Failure/physiopathology , Organ Dysfunction Scores , Proportional Hazards Models , Prospective Studies , Sepsis/mortality , Sepsis/physiopathology , Statistics, Nonparametric
4.
Crit Care ; 24(1): 168, 2020 04 22.
Article in English | MEDLINE | ID: mdl-32321571

ABSTRACT

BACKGROUND: Dipeptidyl peptidase-3 (DPP3) is a metallopeptidase which cleaves bioactive peptides, notably angiotensin II, and is involved in inflammation regulation. DPP3 has been proposed to be a myocardial depressant factor and to be involved in circulatory failure in acute illnesses, possibly due to angiotensin II cleavage. In this study, we evaluated the association between plasmatic DPP3 level and outcome (mortality and hemodynamic failure) in severely ill burn patients. METHODS: In this biomarker analysis of a prospective cohort study, we included severely ill adult burn patients in two tertiary burn intensive care units. DPP3 was measured at admission (DPP3admin) and 3 days after. The primary endpoint was 90-day mortality. Secondary endpoints were hemodynamic failure and acute kidney injury (AKI). RESULTS: One hundred and eleven consecutive patients were enrolled. The median age was 48 (32.5-63) years, with a median total body surface area burned of 35% (25-53.5) and Abbreviated Burn Severity Index (ABSI) of 8 (7-11). Ninety-day mortality was 32%. The median DPP3admin was significantly higher in non-survivors versus survivors (53.3 ng/mL [IQR 28.8-103.5] versus 27.1 ng/mL [IQR 19.4-38.9]; p < 0.0001). Patients with a sustained elevated DPP3 had an increased risk of death compared to patients with high DPP3admin but decreased levels on day 3. Patients with circulatory failure had higher DPP3admin (39.2 ng/mL [IQR 25.9-76.1] versus 28.4 ng/mL [IQR 19.8-39.6]; p = 0.001) as well as patients with AKI (49.7 ng/mL [IQR 30.3-87.3] versus 27.6 ng/mL [IQR 19.4-41.4]; p = 0.001). DPP3admin added prognostic value on top of ABSI (added chi2 12.2, p = 0.0005), Sequential Organ Failure Assessment (SOFA) score at admission (added chi2 4.9, p = 0.0268), and plasma lactate at admission (added chi2 6.9, p = 0.0086) to predict circulatory failure within the first 48 h. CONCLUSIONS: Plasma DPP3 concentration at admission was associated with an increased risk of death, circulatory failure, and AKI in severely burned patients. Whether DPP3 plasma levels could identify patients who would respond to alternative hemodynamic support strategies, such as intravenous angiotensin II, should be explored.


Subject(s)
Acute Kidney Injury/blood , Burns/complications , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Patient Admission/statistics & numerical data , Shock/blood , Aged , Burns/blood , Burns/physiopathology , Cohort Studies , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/blood , Female , Humans , Male , Middle Aged , Prognosis , Prospective Studies , Risk Factors , Severity of Illness Index
5.
J Appl Lab Med ; 3(6): 943-953, 2019 05.
Article in English | MEDLINE | ID: mdl-31639686

ABSTRACT

BACKGROUND: The ubiquitously expressed dipeptidyl peptidase 3 (DPP3) is involved in protein metabolism, blood pressure regulation, and pain modulation. These diverse functions of DPP3 are attributed to the degradation of bioactive peptides like angiotensin II. However, because of limitations in currently available assays for determination of active DPP3 in plasma, the exact physiological function of DPP3 and its role in the catabolism of bioactive peptides is understudied. Here, we developed 2 assays to specifically detect and quantify DPP3 protein and activity in plasma and validated DPP3 quantification in samples from critically ill patients. METHODS: Assay performance was evaluated in a sandwich-type luminometric immunoassay (LIA) and an enzyme capture activity assay (ECA). DPP3 plasma concentrations and activities were detected in a healthy, population-based cohort and in critically ill patients suffering from severe sepsis and septic shock. RESULTS: The DPP3-LIA and DPP3-ECA show an almost ideal correlation and very similar and robust performance characteristics. DPP3 activity is detectable in plasma of predominantly healthy subjects with a mean (±SD) of 58.6 (±20.5) U/L. Septic patients show significantly increased DPP3 plasma activity at hospital admission. DPP3 activities further increase in patients with more severe conditions and high mortality risk. CONCLUSION: We developed 2 highly specific assays for the detection of DPP3 in plasma. These assays allow the use of DPP3 as a biomarker for the severity of acute clinical conditions and will be of great value for future investigations of DPP3's role in bioactive peptide degradation in general and the angiotensin II pathway in specific.


Subject(s)
Dipeptidyl-Peptidases and Tripeptidyl-Peptidases , Immunoassay/methods , Sepsis/blood , Shock, Septic/blood , Biomarkers/analysis , Biomarkers/blood , Critical Illness/mortality , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/blood , Humans , Peptides/metabolism , Predictive Value of Tests , Reproducibility of Results , Risk Assessment/methods
6.
Biochem Biophys Res Commun ; 512(2): 230-235, 2019 04 30.
Article in English | MEDLINE | ID: mdl-30885434

ABSTRACT

The shelterin protein complex protects natural chromosome ends from being recognized as DNA damage sites and also regulates the synthesis of telomeric repeats by telomerase. TPP1, a shelterin subunit that is essential for telomerase extension of telomeres, has been studied intensively in recent years. Many such studies utilize epitope tagged TPP1, but it is unclear how the tags may affect the multiple cellular functions of TPP1. Here we analyzed the effect of adding a 3x Flag epitope tag to the N- or C-terminus of TPP1. While the position of the tag did not affect TPP1's interaction within the shelterin complex or its localization to telomeres, the N-terminal Flag tag on TPP1 impaired telomerase function, resulting in reduced telomerase processivity in vitro and a failure to stimulate telomere elongation in vivo. The C-terminally Flag-tagged TPP1, in contrast, behaved similarly to untagged TPP1 in all functional aspects examined. These findings suggest that caution is required when utilizing epitope tagged TPP1 to study its regulation of telomerase function.


Subject(s)
Aminopeptidases/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism , Protein Interaction Mapping/methods , Serine Proteases/metabolism , Shelterin Complex , Telomerase/metabolism , Telomere-Binding Proteins , Aminopeptidases/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , HCT116 Cells , HeLa Cells , Humans , Protein Interaction Maps , Serine Proteases/analysis , Shelterin Complex/metabolism , Telomere Homeostasis , Telomere-Binding Proteins/metabolism
7.
Histol Histopathol ; 34(4): 359-372, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30226264

ABSTRACT

Extralysosomal proteolysis is a multistep process involving the Ubiquitin- Proteasome System (UPS) and supplementary peptidases. Tripeptidyl peptidase II (TPPII) is the most extensively characterized enzyme, supplementing and sometimes substituting for proteasomal functions. In response to proteasome inhibition, polyubiquitinated proteins acting as proteasome substrates aggregate with proteasomes and form aggresomes. Several proteasome inhibitors are used as anti-cancer drugs. Thus, in our study, we used a novel fluorescent-tagged proteasome inhibitor BSc2118 to induce aggresome formation in C26 murine colon adenocarcinoma cells. It allowed us to obtain effective, inhibitor-based, proteasome staining in vivo. This method has been validated by standard post-fixed indirect immunostaining and also allowed co-immunodetection of TPPII and polyubiquitinated proteins under laser scanning confocal microscopy. We found that in the absence of the inhibitor, TPPII is diffusely dispersed within the cytoplasm of C26 cells. The proteasome and ubiquitin-rich perinuclear region failed to display enhanced TPPII staining. However, when proteasome function was impaired by the inhibitor, TPPII associated more closely with both the proteasome and polyubiquitinated proteins via TPPII recruitment to the perinuclear region and subsequently into emerging aggresomal structures. Furthermore, we have demonstrated the dynamic recruitment of TPPII into the developing aggresome: TPPII in the early aggresome was dispersed within the central part but subsequently aggregated on the surface of this structure. In the mature aggresome of C26 cells TPPII formed a spherical mantle, which surrounded the round core containing proteasomes and polyubiquitinated proteins. Our morphological data indicate that TPPII displays spatial localization with proteasomes especially upon proteasome inhibition in aggresomes of C26 cells.


Subject(s)
Adenocarcinoma/enzymology , Aminopeptidases/analysis , Butanes/pharmacology , Colonic Neoplasms/enzymology , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Oligopeptides/pharmacology , Proteasome Inhibitors/pharmacology , Serine Endopeptidases/analysis , Adenocarcinoma/pathology , Animals , Cell Line, Tumor , Colonic Neoplasms/pathology , Mice , Proteasome Endopeptidase Complex/drug effects , Proteasome Endopeptidase Complex/metabolism
8.
Ned Tijdschr Geneeskd ; 160: D394, 2016.
Article in Dutch | MEDLINE | ID: mdl-27758720

ABSTRACT

BACKGROUND: Autoimmune encephalitis is a rare condition characterized by subacute development of cognitive and psychiatric symptoms. A paraneoplastic syndrome involves autoimmune encephalitis caused by classic antibodies. Although this condition is often associated with cancer, no malignancy has yet been found in 70-90% of patients at the time of diagnosis. CASE DESCRIPTION: We saw a 58-year-old male patient with fatigue, diarrhoea and weight loss. He was also experiencing hyperekplexia, personality changes and an instable gait. PET-CT revealed generalised lymphadenopathy. Histopathological analysis of a lymph node showed mantle cell lymphoma. Further investigation of the fluid revealed anti-DPPX IgG antibodies. We treated the patient's mantle cell lymphoma with R-CHOP; he achieved complete remission and his neurological symptoms resolved almost completely. CONCLUSION: The presence of anti-DPPX IgG antibodies is rare. Although it has not been proven that these antibodies are related to malignancies, this is the third of 30 known cases in which anti-DPPX IgG antibodies and a lymphatic malignancy were found.


Subject(s)
Autoantibodies/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Encephalitis/diagnosis , Encephalitis/drug therapy , Hashimoto Disease/diagnosis , Hashimoto Disease/drug therapy , Lymphoma, Mantle-Cell/diagnosis , Nerve Tissue Proteins/analysis , Potassium Channels/analysis , Antibodies, Monoclonal, Murine-Derived , Antineoplastic Combined Chemotherapy Protocols , Cyclophosphamide , Doxorubicin , Humans , Lymph Nodes/chemistry , Lymphoma, Mantle-Cell/complications , Lymphoma, Mantle-Cell/drug therapy , Male , Middle Aged , Prednisone , Rituximab , Vincristine
9.
Cell Mol Life Sci ; 71(18): 3611-26, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24562348

ABSTRACT

The intracellular prolyl peptidase DPP9 is implied to be involved in various cellular pathways including amino acid recycling, antigen maturation, cellular homeostasis, and viability. Interestingly, the major RNA transcript of DPP9 contains two possible translation initiation sites, which could potentially generate a longer (892 aa) and a shorter version (863 aa) of DPP9. Although the endogenous expression of the shorter DPP9 form has been previously verified, it is unknown whether the longer version is expressed, and what is its biological significance. By developing specific antibodies against the amino-terminal extension of the putative DPP9-long form, we demonstrate for the first time the endogenous expression of this longer isoform within cells. Furthermore, we show that DPP9-long represents a significant fraction of total DPP9 in cells, under steady-state conditions. Using biochemical cell fractionation assays in combination with immunofluorescence studies, we find the two isoforms localize to separate subcellular compartments. Whereas DPP9-short is present in the cytosol, DPP9-long localizes preferentially to the nucleus. This differential localization is attributed to a classical monopartite nuclear localization signal (K(K/R)X(K/R)) in the N-terminal extension of DPP9-long. Furthermore, we detect prolyl peptidase activity in nuclear fractions, which can be inhibited by specific DPP8/9 inhibitors. In conclusion, a considerable fraction of DPP9, which was previously considered as a purely cytosolic peptidase, localizes to the nucleus and is active there, raising the intriguing possibility that the longer DPP9 isoform may regulate the activity or stability of nuclear proteins, such as transcription factors.


Subject(s)
Cell Nucleus/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/chemistry , Nuclear Localization Signals , Amino Acid Sequence , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/physiology , HeLa Cells , Humans , Isoenzymes/chemistry , Isoenzymes/metabolism , Isoenzymes/physiology , Molecular Sequence Data , Protein Transport
10.
An. pediatr. (2003, Ed. impr.) ; 76(3): 148-152, mar. 2012. tab
Article in Spanish | IBECS | ID: ibc-97632

ABSTRACT

Introducción: Las ceroidolipofuscinosis neuronales (CLN) representan un grupo de enfermedades lisosomales hereditarias de herencia autosómica recesiva, de presentación más frecuente durante la niñez, caracterizadas neuropatológicamente por acumulación de lipopigmentos autofluorescentes en los lisosomas de neuronas y otras células. Clínicamente se presentan con pérdida de las habilidades psicomotoras adquiridas, incoordinación motora, ataxia, pérdida de la visión, cambios de conducta, convulsiones de difícil tratamiento asociadas a mioclonías y una corta expectativa de vida. En la actualidad, se conocen 10 formas genéticamente distintas de esta enfermedad, entre ellas la forma infantil tardía donde las manifestaciones clínicas aparecen entre el segundo y cuarto año de vida. El gen responsable de la enfermedad es el TPP1 ubicado en 11p15 y codifica la enzima tripeptidil peptidasa 1. Pacientes y métodos: Se estandarizó la técnica para el diagnóstico enzimático de la ceroidolipofuscinosis neuronal infantil tardía a través de sangre seca en papel de filtro en 76 individuos sanos en edad preescolar y adulta de población venezolana. La actividad enzimática de la TPP1 fue determinada en 9 pacientes con diagnóstico clínico de ceroidolipofuscinosis infantil tardía 2 (CLN2). Resultados: Seis pacientes mostraron valores de actividad muy por debajo del rango establecido (0,11-0,45 nmol/mancha) para los controles sanos en edad preescolar, confirmando el diagnostico enzimático. Tres de los 14 padres estudiados presentaron valores en el rango de heterocigotos. Conclusiones: El diagnóstico enzimático de CLN2 a través de la determinación de la actividad enzimática de la enzima TPP1 mediante la técnica de sangre seca en papel de filtro permite un diagnóstico rápido, sencillo, económico y confiable(AU)


Introduction: Neuronal ceroid lipofuscinoses are a group of inherited autosomal recessive lysosomal diseases, most commonly found in infancy. These are neuropathologically characterised by accumulation of an autofluorescent lipopigment in neurons and other cells. This condition is clinically characterised by loss of motor and cognitive skills, lack of motor coordination, ataxia, progressive visual impairment, behavioural changes; seizures of difficult to manage seizures, particularly myoclonic, and premature death. Ten clinical forms have been described, one of which is late infantile where clinical signs begin between two and four years. The gene responsible for this disease is located at 11p15 locus, and the enzyme encoded by this gene is the tripeptidyl peptidase 1. Patients and methods: We standardised the technique for the enzymatic diagnosis of late infantile neuronal ceroid lipofuscinoses from dried blood on filter paper card in 76 healthy individuals adults and children in order to establish a normal range in the Venezuelan population. The tripeptidyl peptidase activity was also determined in 9 patients with a clinical diagnosis of late infantile neuronal ceroid lipofuscinoses. Results: Six of the samples showed activity lower than the lowest control value (0.11 to 0.45 nmol/spot) from healthy controls of infantile age, confirming the enzymatic diagnosis. Three of the 14 parent samples analysed showed values in the heterozygote ranges. Conclusions: The enzymatic diagnosis of late infantile neuronal ceroid lipofuscinoses from dried blood on filter paper card is a rapid, easier, less expensive and accurate molecular diagnosis tool(AU)


Subject(s)
Humans , Male , Female , Child, Preschool , Child , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Neuronal Ceroid-Lipofuscinoses/diagnosis , Neurodegenerative Diseases/epidemiology , Thiamine Pyrophosphatase/analysis
11.
Clin Vaccine Immunol ; 18(9): 1568-76, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21734068

ABSTRACT

Aspergillus terreus has been difficult to identify in cases of aspergillosis, and clinical identification has been restricted to the broad identification of aspergillosis lesions in affected organs or the detection of fungal carbohydrates. As a result, there is a clinical need to identify species-specific biomarkers that can be used to detect invasive A. terreus disease. Monoclonal antibodies (MAbs) were developed to a partially purified preparation of cytolytic hyphal exoantigens (HEA) derived from A. terreus culture supernatant (CSN). Twenty-three IgG1 isotype murine MAbs were developed and tested for cross-reactivity against hyphal extracts of 54 fungal species. Sixteen MAbs were shown to be specific for A. terreus. HEA were detected in conidia, hyphae, and in CSN of A. terreus. HEA were expressed in high levels in the hyphae during early stages of A. terreus growth at 37°C, whereas at room temperature the expression of HEA peaked by days 4 to 5. Expression kinetics of HEA in CSN showed a lag, with peak levels at later time points at room temperature and 37°C than in hyphal extracts. Serum spiking experiments demonstrated that human serum components do not inhibit detection of the HEA epitopes by MAb enzyme-linked immunosorbent assay (ELISA). Immunoprecipitation and proteomic analysis demonstrated that MAbs 13E11 and 12C4 immunoprecipitated a putative uncharacterized leucine aminopeptidase (Q0CAZ7), while MAb 19B2 recognized a putative dipeptidyl-peptidase V (DPP5). Studies using confocal laser scanning microscopy showed that the uncharacterized leucine aminopeptidase mostly localized to extracellular matrix structures while dipeptidyl-peptidase V was mostly confined to the cytoplasm.


Subject(s)
Antibodies, Fungal , Antibodies, Monoclonal , Antigens, Fungal/immunology , Aspergillosis/diagnosis , Aspergillus/immunology , Hyphae/immunology , Opportunistic Infections/diagnosis , Animals , Antibodies, Fungal/biosynthesis , Antibodies, Fungal/immunology , Antibodies, Monoclonal/biosynthesis , Antibodies, Monoclonal/immunology , Antigens, Fungal/analysis , Aspergillosis/immunology , Aspergillosis/microbiology , Aspergillus/classification , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/immunology , Enzyme-Linked Immunosorbent Assay , Humans , Immunoprecipitation , Leucyl Aminopeptidase/analysis , Leucyl Aminopeptidase/immunology , Mice , Microscopy, Confocal , Opportunistic Infections/immunology , Opportunistic Infections/microbiology , Proteomics , Rabbits , Species Specificity
12.
Bioorg Med Chem ; 19(16): 4953-70, 2011 Aug 15.
Article in English | MEDLINE | ID: mdl-21764322

ABSTRACT

The design, synthesis, and structure-activity relationships of a new class of potent and orally active non-peptide dipeptidyl peptidase IV (DPP-4) inhibitors, 3-aminomethyl-1,2-dihydro-4-phenyl-1-isoquinolones, are described. We hypothesized that the 4-phenyl group of the isoquinolone occupies the S1 pocket of the enzyme, the 3-aminomethyl group forms an electrostatic interaction with the S2 pocket, and the introduction of a hydrogen bond donor onto the 6- or 7-substituent provides interaction with the hydrophilic region of the enzyme. Based on this hypothesis, intensive research focused on developing new non-peptide DPP-4 inhibitors has been carried out. Among the compounds designed in this study, we identified 2-[(3-aminomethyl-2-(2-methylpropyl)-1-oxo-4-phenyl-1,2-dihydro-6-isoquinolinyl)oxy]acetamide (35a) as a potent, selective, and orally bioavailable DPP-4 inhibitor, which exhibited in vivo efficacy in diabetic model rats. Finally, X-ray crystallography of 35a in a complex with the enzyme validated our hypothesized binding mode and identified Lys554 as a new target-binding site available for DPP-4 inhibitors.


Subject(s)
Dipeptidyl Peptidase 4/drug effects , Dipeptidyl-Peptidase IV Inhibitors/chemical synthesis , Hypoglycemic Agents/chemical synthesis , Isoquinolines/chemical synthesis , Administration, Oral , Animals , Blood Glucose , Caco-2 Cells , Diabetes Mellitus, Type 2/drug therapy , Dipeptidyl Peptidase 4/analysis , Dipeptidyl-Peptidase IV Inhibitors/administration & dosage , Dipeptidyl-Peptidase IV Inhibitors/chemistry , Dipeptidyl-Peptidase IV Inhibitors/pharmacology , Dipeptidyl-Peptidase IV Inhibitors/therapeutic use , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/antagonists & inhibitors , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/drug effects , Drug Design , Female , Glucose Tolerance Test , Humans , Hypoglycemic Agents/administration & dosage , Hypoglycemic Agents/chemistry , Hypoglycemic Agents/pharmacology , Hypoglycemic Agents/therapeutic use , Isoquinolines/administration & dosage , Isoquinolines/pharmacology , Isoquinolines/therapeutic use , Molecular Targeted Therapy , Peptides/metabolism , Quinolones/administration & dosage , Quinolones/chemical synthesis , Quinolones/chemistry , Quinolones/pharmacology , Quinolones/therapeutic use , Rats , Rats, Wistar , Structure-Activity Relationship
13.
Cell Mol Life Sci ; 68(3): 453-74, 2011 Feb.
Article in English | MEDLINE | ID: mdl-20680390

ABSTRACT

Neuronal ceroid lipofuscinoses (NCL) are caused by mutations in eight different genes, are characterized by lysosomal accumulation of autofluorescent storage material, and result in a disease that causes degeneration of the central nervous system (CNS). Although functions are defined for some of the soluble proteins that are defective in NCL (cathepsin D, PPT1, and TPP1), the primary function of the other proteins defective in NCLs (CLN3, CLN5, CLN6, CLN7, and CLN8) remain poorly defined. Understanding the localization and network of interactions for these proteins can offer clues as to the function of the NCL proteins and also the pathways that will be disrupted in their absence. Here, we present a review of the current understanding of the localization, interactions, and function of the proteins associated with NCL.


Subject(s)
Aminopeptidases/metabolism , Cathepsin D/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism , Membrane Proteins/metabolism , Neuronal Ceroid-Lipofuscinoses/metabolism , Serine Proteases/metabolism , Thiolester Hydrolases/metabolism , Aminopeptidases/analysis , Aminopeptidases/genetics , Animals , Cathepsin D/analysis , Cathepsin D/genetics , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/genetics , Humans , Lysosomes/genetics , Lysosomes/metabolism , Lysosomes/pathology , Membrane Proteins/analysis , Membrane Proteins/genetics , Neuronal Ceroid-Lipofuscinoses/genetics , Protein Interaction Mapping , Serine Proteases/analysis , Serine Proteases/genetics , Thiolester Hydrolases/analysis , Thiolester Hydrolases/genetics , Tripeptidyl-Peptidase 1
14.
Infect Immun ; 73(10): 6584-90, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16177334

ABSTRACT

Dermatophytes are adapted to infect keratinized tissues by their ability to utilize keratin as a nutrient source. Although there have been numerous reports that dermatophytes like Trichophyton sp. secrete proteolytic enzymes, virtually nothing is known about the patterns of gene expression in the host or even when the organisms are cultured on protein substrates in the absence of a host. We characterized the expression of an aminopeptidase gene, the Trichophyton mentagrophytes homolog of the Trichophyton rubrum Tri r 4 gene. The T. rubrum gene was originally isolated based on the ability of the protein encoded by it to induce immediate and delayed-type hypersensitivity in skin tests. T. mentagrophytes Tri m 4 is closely related to Tri r 4 (almost 94% identity at the protein level). Tri m 4 resembles other protease-encoding genes thought to be virulence factors (for example, DPP V of Aspergillus fumigatus). The Tri m 4 protein was detected immunochemically both in fungal extracts and in the culture medium. Expression of the Tri m 4 gene was induced severalfold when T. mentagrophytes was grown on keratin and elastin. Ex vivo, strong induction was observed after culture on blood plasma, but the use of homogenized skin did not result in a significant increase in Tri m 4 transcript levels. In order to identify additional genes encoding putative virulence factors, differential cDNA screening was performed. By this method, a fungal thioredoxin and a cellulase homolog were identified, and both genes were found to be strongly induced by skin extracellular matrix proteins. Induction by superficial (keratin) and deep (elastin) skin elements suggests that the products of these genes may be important in both superficial and deep dermatophytosis, and models for their function are proposed. Upregulation of several newly identified T. mentagrophytes genes on protein substrates suggests that these genes encode proteins which are relevant to the dermatophyte-skin interaction.


Subject(s)
Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/genetics , Gene Expression Regulation, Fungal , Tinea/microbiology , Trichophyton/enzymology , Trichophyton/genetics , Amino Acid Sequence , Base Sequence , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/classification , Fungal Proteins/genetics , Genes, Fungal , Genetic Markers/genetics , Humans , Molecular Sequence Data , Phylogeny
16.
Arch Surg ; 139(1): 83-8, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14718282

ABSTRACT

HYPOTHESIS: Dipeptidyl aminopeptidase IV (DPP IV) activity in cytological samples from a follicular thyroid tumor is the most sensitive and specific indicator for the detection of follicular carcinoma of the thyroid gland. Dipeptidyl aminopeptidase IV activity is independent of cytological characteristics and superior to other clinical findings. DESIGN AND PATIENT SELECTION: Among the patients surgically treated for follicular thyroid tumors, we recruited approximately equal numbers of those with true-positive (n = 19), true-negative (n = 26), false-negative (n = 16), and false-positive (n = 18) cytological characteristics. MAIN OUTCOME MEASURES: We examined DPP IV activity using cytological specimens obtained from 35 patients with follicular thyroid carcinomas and 44 patients with follicular adenomas. Tumor size, patient age, serum thyroglobulin level, and ultrasonographic findings were also analyzed. RESULTS: The positive rate of DPP IV activity was 97% in 35 patients with follicular thyroid carcinomas and 5% in 44 patients with follicular adenomas, resulting in a sensitivity of 97%, a specificity of 95%, and an overall accuracy of 96%. This discriminating ability of DPP IV activity was far higher than that of tumor size, patient age, serum thyroglobulin level, or ultrasonographic findings. CONCLUSIONS: Positive DPP IV activity in cytological samples is the best discriminatory marker between follicular thyroid carcinoma and follicular adenoma. Its application could alter the clinical management of patients with follicular thyroid tumors.


Subject(s)
Adenocarcinoma, Follicular/pathology , Adenoma/pathology , Biomarkers, Tumor/analysis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism , Thyroid Neoplasms/pathology , Adenocarcinoma, Follicular/enzymology , Adenoma/enzymology , Biopsy, Needle , Cohort Studies , Diagnosis, Differential , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Female , Humans , Immunohistochemistry , Male , Prognosis , Sensitivity and Specificity , Thyroid Neoplasms/enzymology
17.
Cell Transplant ; 13(6): 659-66, 2004.
Article in English | MEDLINE | ID: mdl-15648736

ABSTRACT

We have investigated the contribution of intrasplenic bone marrow transplants or in vivo mobilized hematopoietic stem cells to the formation of hepatocytes in normal and injured liver. Direct intrasplenic injections of bone marrow mononuclear cells (5 x 10(5) cells), Scal+/lin- hematopoietic stem cells (5 x 10(3)) cells, and highly purified "side population" hematopoietic stem cells (5 x 10(3)) derived from enhanced green fluorescent protein (EGFP)-transgenic mice [C57Bl/6-TgN(ActbEGFP)1Osb] were performed in normal C57Bl/6 mice (n = 6) and in C57Bl/6 mice following two thirds hepatectomy (n = 8). To test the effect of mobilized stem cells on transdifferentiation, C57Bl/6 mice (n = 12) were lethally irradiated and reconstituted with EGFP-positive bone marrow mononuclear cells in a second series of experiments. Eight to 12 weeks after bone marrow transplantation a subset of mice (n = 3 in each group) received either rhG-CSF for hematopoietic stem cell mobilization, rhG-CSF combined with an intraperitoneal application of carbon tetrachloride (CCl4) as hepatocyte regeneration stimulus, or CCl4 alone. All mice were completely perfused with PBS to remove circulating nonorgan cells for analyses 4 weeks later. Liver as well as heart, intestine, spleen, and kidney tissue was analyzed for the presence of EGFP-transgenic cells. In 100 sections (2.3 x 10(7) cells) of any recipient mouse no EGFP-positive hepatocytes were detected either by analysis of native EGFP fluorescence or by immunofluorescence analysis with anti-EGFP and antidipeptidyl peptidase (DPP) IV antibodies. EGFP-transgenic cells resembling heart, kidney, or intestinal cells could also not be proven. The results demonstrate that there is little or no contribution of bone marrow-derived cells to the regeneration of normal and injured liver in the animal models used. Thus, potential therapeutic prospects of hematopoietic stem cell therapy for liver disease have to be critically reassessed.


Subject(s)
Bone Marrow Cells/physiology , Bone Marrow Transplantation , Liver Diseases/therapy , Liver Regeneration/physiology , Animals , Bone Marrow/drug effects , Bone Marrow Cells/cytology , Carbon Tetrachloride/pharmacology , Chemical and Drug Induced Liver Injury , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Flow Cytometry , Granulocyte Colony-Stimulating Factor/pharmacology , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Hematopoietic Stem Cell Mobilization , Hematopoietic Stem Cell Transplantation , Hematopoietic Stem Cells/cytology , Hematopoietic Stem Cells/physiology , Hepatectomy , Hepatocytes/cytology , Hepatocytes/drug effects , Injections, Intralymphatic , Mice , Mice, Inbred C57BL , Mice, Transgenic , Microscopy, Fluorescence , Recombinant Proteins , Spleen/cytology , Whole-Body Irradiation
18.
Eur J Oral Sci ; 109(4): 260-6, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11531072

ABSTRACT

A body of published evidence suggests that a significant portion of enamel matrix protein synthesized by ameloblasts localises in the lysosomal-endosomal organelles of these enamel organ cells. Little is known regarding the lysosomal proteolytic activities during amelogenesis. The aims of this study were to detect and measure the activities of lysosomal peptidases cathepsin B (E.C. 3.4.22.1) and dipeptidyl-peptidase II (E.C. 3.4.14.2) in the enamel organ of the rat incisor and to ascertain whether rat enamel matrix proteins are degraded by these peptidases in vitro. Whole enamel organs were dissected from rat mandibular incisors. Enamel protein was also collected from the rat teeth. Analysis indicated that the rat incisor enamel organs contained specific activities of both dipeptidyl-peptidase II and cathepsin B at levels comparable with those of kidney which is rich in both these lysosomal peptidases. Gel electrophoresis and immunoblotting demonstrated that both cathepsin B and dipeptidyl-peptidase II were able to substantially degrade the rat enamel proteins in vitro. Based on these observations, we propose that lysosomal proteases have roles in amelogenesis in the intracellular degradation of amelogenins.


Subject(s)
Amelogenesis/physiology , Cathepsin B/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism , Enamel Organ/enzymology , Amelogenin , Animals , Blotting, Western , Cathepsin B/analysis , Chromogenic Compounds , Coumarins , Dental Enamel Proteins/analysis , Dental Enamel Proteins/metabolism , Dipeptides , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Electrophoresis, Polyacrylamide Gel , Fluorescent Dyes , Hydrogen-Ion Concentration , Immunoblotting , Incisor , Kidney/enzymology , Lysosomes/enzymology , Rats , Rats, Wistar , Spectrometry, Fluorescence , Statistics as Topic
19.
Dig Dis Sci ; 46(1): 96-105, 2001 Jan.
Article in English | MEDLINE | ID: mdl-11270800

ABSTRACT

Short chain fatty acids may protect colonic mucosa against neoplastic transformation by modulating colonocyte phenotype, DNA synthesis, and c-myc levels. To test this hypothesis, nonmalignant and malignant human colonocytes were isolated from surgical specimens and treated with 10 mM acetate, propionate, or butyrate. Markers of cellular phenotype, DNA synthesis, and c-myc protein levels were assayed by alkaline phosphatase and dipeptidyl dipeptidase IV activities, [3H]thymidine labeling, and western blotting, respectively. Butyrate, in particular, exerted discordant effects on alkaline phosphatase (P < 0.05), and c-myc levels (P < 0.05, N > or = 6) in nonmalignant and malignant human colonocytes. DPDD was unaffected by any of the short chain fatty acids tested. [3H]Thymidine labeling was differentially stimulated by short chain fatty acids in both cell types and greater DNA synthesis rates were observed in malignant colonocytes (P < 0.005, N = 16). These data suggest that in vitro, butyrate, in particular, may differentially modulate phenotype, DNA synthesis, and c-myc in nonmalignant and malignant human colonocytes.


Subject(s)
Colon/cytology , Colon/pathology , Colonic Neoplasms/pathology , DNA/biosynthesis , Fatty Acids, Volatile/pharmacology , Proto-Oncogene Proteins c-myc/analysis , Aged , Alkaline Phosphatase/analysis , Butyrates/pharmacology , Cell Separation , Cell Survival , Cells, Cultured , DNA, Neoplasm/biosynthesis , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Female , Humans , Male , Phenotype , Stimulation, Chemical , Thymidine/metabolism
20.
Cell Mol Biol (Noisy-le-grand) ; 46(7): 1213-8, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11075950

ABSTRACT

A new method for the histochemical visualization of lysosomal aminopeptidase dipeptidyl peptidase II activity (DPP II) is developed. The substrate L-Lys-L-Ala-5-chloro-1-anthraquinonylhydrazide-2HBr (Lys-Ala-CAH) is readily hydrolyzed by the enzyme to release 5-Cl-1-anthraquinonylhydrazine (CAH). The last compound is simultaneously coupled to an aromatic aldehyde, e.g. 4-nitrobenzaldehyde (p-NBA) or piperonal (3,4-methylenedioxybenzaldehyde; PPL), to form a highly insoluble deeply colored hydrazone, marking the enzyme locations. Using the new method, DPP II is successfully localyzed in tissue sections from different rat organs.


Subject(s)
Anthraquinones/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism , Histocytochemistry/methods , Animals , Anthraquinones/chemistry , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/analysis , Enterocytes/enzymology , Epididymis/enzymology , Female , Hydrazones/analysis , Hydrazones/metabolism , Kidney/enzymology , Liver/enzymology , Macrophages/enzymology , Male , Rats , Rats, Wistar
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