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1.
Nat Commun ; 11(1): 2619, 2020 05 26.
Article in English | MEDLINE | ID: mdl-32457326

ABSTRACT

DIS3L2-mediated decay (DMD) is a surveillance pathway for certain non-coding RNAs (ncRNAs) including ribosomal RNAs (rRNAs), transfer RNAs (tRNAs), small nuclear RNAs (snRNAs), and RMRP. While mutations in DIS3L2 are associated with Perlman syndrome, the biological significance of impaired DMD is obscure and pathological RNAs have not been identified. Here, by ribosome profiling (Ribo-seq) we find specific dysregulation of endoplasmic reticulum (ER)-targeted mRNA translation in DIS3L2-deficient cells. Mechanistically, DMD functions in the quality control of the 7SL ncRNA component of the signal recognition particle (SRP) required for ER-targeted translation. Upon DIS3L2 loss, sustained 3'-end uridylation of aberrant 7SL RNA impacts ER-targeted translation and causes ER calcium leakage. Consequently, elevated intracellular calcium in DIS3L2-deficient cells activates calcium signaling response genes and perturbs ESC differentiation. Thus, DMD is required to safeguard ER-targeted mRNA translation, intracellular calcium homeostasis, and stem cell differentiation.


Subject(s)
Calcium/metabolism , Endoplasmic Reticulum/metabolism , Exoribonucleases/metabolism , Fetal Macrosomia/microbiology , RNA, Messenger/metabolism , Wilms Tumor/microbiology , Animals , Calcium Signaling/genetics , Cell Differentiation , Embryonic Stem Cells , Exoribonucleases/deficiency , Exoribonucleases/genetics , Fetal Macrosomia/enzymology , Fetal Macrosomia/genetics , Gene Expression Regulation , Humans , Insulin/metabolism , Mice , Protein Biosynthesis , RNA, Small Cytoplasmic/metabolism , Signal Recognition Particle/metabolism , Uridine Monophosphate/metabolism , Wilms Tumor/enzymology , Wilms Tumor/genetics
2.
EMBO J ; 32(13): 1799-801, 2013 Jul 03.
Article in English | MEDLINE | ID: mdl-23756464

ABSTRACT

Regulated degradation plays a major role in determining the levels of both non-coding (miRNA) and coding (mRNA) transcripts. Thus, insights into the factors and pathways that influence this process have broad, interdisciplinary implications. New findings by Malecki et al (2013), Lubas et al (2013), and Chang et al (2013) identify the protein Dis3L2 as a major player in the 3'­5' exonucleolytic decay of transcripts. Furthermore, they demonstrate a strong connection between terminal uridylation of the RNA substrate and enzymatic activity.


Subject(s)
Cytoplasm/metabolism , Exonucleases/metabolism , Exoribonucleases/metabolism , Exosomes/genetics , Exosomes/metabolism , Fetal Macrosomia/enzymology , Fetal Macrosomia/genetics , MicroRNAs/metabolism , RNA Processing, Post-Transcriptional , RNA Stability/genetics , RNA, Messenger/metabolism , RNA-Binding Proteins/metabolism , Ribonucleases/metabolism , Schizosaccharomyces/genetics , Wilms Tumor/enzymology , Wilms Tumor/genetics , Animals , Humans
4.
Nature ; 497(7448): 244-8, 2013 May 09.
Article in English | MEDLINE | ID: mdl-23594738

ABSTRACT

The pluripotency factor Lin28 blocks the expression of let-7 microRNAs in undifferentiated cells during development, and functions as an oncogene in a subset of cancers. Lin28 binds to let-7 precursor (pre-let-7) RNAs and recruits 3' terminal uridylyl transferases to selectively inhibit let-7 biogenesis. Uridylated pre-let-7 is refractory to processing by Dicer, and is rapidly degraded by an unknown RNase. Here we identify Dis3l2 as the 3'-5' exonuclease responsible for the decay of uridylated pre-let-7 in mouse embryonic stem cells. Biochemical reconstitution assays show that 3' oligouridylation stimulates Dis3l2 activity in vitro, and knockdown of Dis3l2 in mouse embryonic stem cells leads to the stabilization of pre-let-7. Our study establishes 3' oligouridylation as an RNA decay signal for Dis3l2, and identifies the first physiological RNA substrate of this new exonuclease, which is mutated in the Perlman syndrome of fetal overgrowth and causes a predisposition to Wilms' tumour development.


Subject(s)
Exonucleases/metabolism , Exoribonucleases/metabolism , Fetal Macrosomia/enzymology , Fetal Macrosomia/genetics , MicroRNAs/metabolism , RNA Stability , RNA-Binding Proteins/metabolism , Ribonucleases/metabolism , Wilms Tumor/enzymology , Wilms Tumor/genetics , Animals , Cells, Cultured , Embryonic Stem Cells/metabolism , Fetal Macrosomia/metabolism , HEK293 Cells , Humans , Mice , MicroRNAs/genetics , RNA Precursors/genetics , RNA Precursors/metabolism , RNA Processing, Post-Transcriptional , Substrate Specificity , Uridine Monophosphate/analogs & derivatives , Uridine Monophosphate/metabolism , Wilms Tumor/etiology , Wilms Tumor/metabolism
5.
Am J Hum Biol ; 13(3): 417-20, 2001.
Article in English | MEDLINE | ID: mdl-11460908

ABSTRACT

A deviation of the maternal-neonatal joint phosphoglucomutase locus 1 (PGM1) distribution from Hardy-Weinberg expectation has been reported. It was suggested that selection on PGM1 during intrauterine life might account for these deviations and that maternal and paternal PGM1 alleles might have different associations with intrauterine survival. This study considered possible associations between the joint mother-newborn PGM1 genotype and intrauterine growth. There was a significant association between birth weight percentile class and mother-newborn PGM1 genotype in infant females. Also, the paternal PGM1*2 allele was associated negatively with macrosomia, and this effect was significant only in female infants.


Subject(s)
Birth Weight/genetics , Embryonic and Fetal Development/genetics , Fetal Macrosomia/genetics , Gene Frequency/genetics , Parents , Phosphoglucomutase/genetics , Phosphoproteins/genetics , Polymorphism, Genetic/genetics , Selection, Genetic , Alleles , Female , Fetal Macrosomia/enzymology , Fetal Macrosomia/epidemiology , Genotype , Humans , Infant, Newborn , Italy/epidemiology , Linear Models , Male , Models, Genetic , Sex Characteristics
6.
Clin Sci (Lond) ; 97(1): 123-8, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10369805

ABSTRACT

Endothelial nitric oxide synthase (NOS) protein and mRNA have been identified and calcium-dependent NOS activity has been measured in human placentae during normal pregnancy. Recently, mRNA and protein for the inducible isoform of NOS have been detected in placentae of women with gestational diabetes. The aim of this study was to determine whether calcium-independent (ciNOS) and/or total (tNOS) NOS activities were increased in placentae obtained after vaginal delivery or Caesarean section from women assigned to the following groups according to standard obstetric criteria: gestational diabetes, diabetes before pregnancy and non-diabetic controls. tNOS and ciNOS were assessed by measuring the conversion of [3H]L-arginine to [3H]L-citrulline in the three groups. Michaelis-Menten constants (Km) and maximum velocities of reaction (Vmax) were calculated using Lineweaver-Burk analysis for tNOS. There were no significant differences in either ciNOS, Vmax or Km values between any of the three groups (normal, ciNOS 12.7+/-1.6%, Vmax 16.6+/-3.3 pmol.min-1.mg-1 protein, Km 15.30+/-2.6 micromol/l; gestational diabetes, ciNOS 15.4+/-1.4%, Vmax 14.8+/-5.2 pmol.min-1. mg-1 protein, Km 10.5+/-1.7 micromol/l; diabetes before pregnancy, ciNOS 13.4+/-1.1%, Vmax 14.9+/-3.4 pmol.min-1.mg-1 protein, Km 17. 7+/-2.2 micromol/l). The presence of macrosomia did not affect tNOS activity in those with diabetes before pregnancy, and glycosylated haemoglobin levels measured between weeks 27 and 39 were not correlated with ciNOS activity. The results from the present study do not provide evidence for increased placental tNOS or ciNOS activities in pregnancies complicated by gestational diabetes or diabetes present before pregnancy.


Subject(s)
Nitric Oxide Synthase/metabolism , Placenta/enzymology , Pregnancy in Diabetics/enzymology , Diabetes, Gestational/enzymology , Female , Fetal Macrosomia/enzymology , Gestational Age , Glycated Hemoglobin/metabolism , Humans , Pregnancy
8.
Early Hum Dev ; 17(2-3): 265-74, 1988.
Article in English | MEDLINE | ID: mdl-3208681

ABSTRACT

Both in diabetic and in normal pregnancy the proportion of macrosomic fetuses is much lower among newborns carrying Pc allele of erythrocyte acid phosphatase (ACP1) than among other ACP1 genotypes. In diabetic pregnancy the well known increased incidence of fetal macrosomia has been observed only among fetuses which do not carry this allele. ACP1 probably functions as a flavin-mononucleotide phosphatase. Since Pc allele is associated with the highest enzymatic activity it is likely that subjects carrying this gene may have a relatively lower concentration of flavin-mononucleotide cofactors and in turn a reduced rate of metabolic activities controlled by flavoenzymes. It is possible that in fetuses carrying Pc, flavo-enzyme activities are regulated at a level that does not allow a full response to stimuli (both genetic and/or environmental) aimed to maximize fetal growth.


Subject(s)
Acid Phosphatase/blood , Erythrocytes/enzymology , Fetal Macrosomia/enzymology , Pregnancy in Diabetics , Acid Phosphatase/genetics , Adult , Diabetes Mellitus, Type 1/complications , Diabetes Mellitus, Type 2/complications , Female , Fetal Macrosomia/blood , Fetal Macrosomia/etiology , Genotype , Humans , Infant, Newborn , Phenotype , Polymorphism, Genetic , Pregnancy
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